organic compounds
8b,8c-Diphenyl-2,6-bis(4-pyridylmethyl)perhydro-2,3a,4a,6,7a,8a-hexaazacyclopenta[def]fluorene-4,8-dithione chloroform solvate
aKey Laboratory of Pesticides and Chemical Biology of the Ministry of Education, College of Chemistry, Central China Normal University, Wuhan 430079, People's Republic of China
*Correspondence e-mail: net_dcong@163.com
In the thioglycoluril system of the title compound, C32H30N8S2·CHCl3, the two pyridine rings are roughly parallel, forming a dihedral angle of 7.2 (1)°, and the distance between the centroids of the two phenyl rings is 3.951 (5) Å. The chloroform solvent molecule is linked to the main molecule via a weak C—H⋯N hydrogen bond.
Related literature
For applications of glycoluril derivatives, see: Rowan et al. (1999). For the preparation of the title compound, see: Broan et al. (1989); Li et al. (2008).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: SMART (Bruker, 1997); cell SAINT (Bruker, 1999); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536810020040/cv2714sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810020040/cv2714Isup2.hkl
The title compound was synthesized according to the literature (Broan et al., 1989; Li et al., 2008). Crystals of (I) suitable for X-ray diffraction were grown by slow evaporation of a chloroform-methanol (1:2) solution of the title compound under 293 K.
All H atoms were positioned in geometrically idealized positions and constrained to ride on their parent atoms, with C—H distances in the range 0.93-0.98 Å and Uiso(H) = 1.2-1.5Ueq(C). The low ratio observed/unique reflections (0.38) was mainly caused by poor quality of the crystal selected for measurements.
Data collection: SMART (Bruker, 1997); cell
SAINT (Bruker, 1999); data reduction: SAINT (Bruker, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. A view of (I), showing the atom-labelling scheme, with displacement ellipsoids drawn at the 30% probability level. |
C32H30N8S2·CHCl3 | V = 1673.81 (18) Å3 |
Mr = 710.13 | Z = 2 |
Triclinic, P1 | F(000) = 736 |
Hall symbol: -P 1 | Dx = 1.409 Mg m−3 |
a = 9.5381 (6) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 12.1712 (8) Å | µ = 0.44 mm−1 |
c = 14.8765 (9) Å | T = 294 K |
α = 100.978 (1)° | Block, colourless |
β = 91.699 (1)° | 0.20 × 0.10 × 0.10 mm |
γ = 98.500 (1)° |
Bruker SMART APEX CCD area-detector diffractometer | 2136 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.109 |
Graphite monochromator | θmax = 25.0°, θmin = 1.7° |
phi and ω scans | h = −11→11 |
11061 measured reflections | k = −14→13 |
5690 independent reflections | l = −17→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.062 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.210 | H-atom parameters constrained |
S = 0.85 | w = 1/[σ2(Fo2) + (0.1041P)2] where P = (Fo2 + 2Fc2)/3 |
5690 reflections | (Δ/σ)max = 0.001 |
415 parameters | Δρmax = 0.47 e Å−3 |
0 restraints | Δρmin = −0.39 e Å−3 |
C32H30N8S2·CHCl3 | γ = 98.500 (1)° |
Mr = 710.13 | V = 1673.81 (18) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.5381 (6) Å | Mo Kα radiation |
b = 12.1712 (8) Å | µ = 0.44 mm−1 |
c = 14.8765 (9) Å | T = 294 K |
α = 100.978 (1)° | 0.20 × 0.10 × 0.10 mm |
β = 91.699 (1)° |
Bruker SMART APEX CCD area-detector diffractometer | 2136 reflections with I > 2σ(I) |
11061 measured reflections | Rint = 0.109 |
5690 independent reflections |
R[F2 > 2σ(F2)] = 0.062 | 0 restraints |
wR(F2) = 0.210 | H-atom parameters constrained |
S = 0.85 | Δρmax = 0.47 e Å−3 |
5690 reflections | Δρmin = −0.39 e Å−3 |
415 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. Because of the poor quality of crystal, the ratio of Observed/Unique Reflections is 38%. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.4638 (5) | 0.4696 (4) | 0.1361 (4) | 0.0426 (14) | |
H1A | 0.4056 | 0.4515 | 0.0790 | 0.051* | |
H1B | 0.4486 | 0.5435 | 0.1685 | 0.051* | |
C2 | 0.6423 (6) | 0.3623 (4) | 0.0735 (4) | 0.0461 (15) | |
H2A | 0.7434 | 0.3659 | 0.0658 | 0.055* | |
H2B | 0.5934 | 0.3385 | 0.0133 | 0.055* | |
C3 | 0.4314 (5) | 0.4077 (4) | 0.2860 (4) | 0.0395 (14) | |
C4 | 0.6795 (5) | 0.2382 (4) | 0.1877 (4) | 0.0391 (14) | |
C5 | 0.4489 (5) | 0.2700 (4) | 0.1553 (3) | 0.0295 (12) | |
C6 | 0.3463 (5) | 0.2069 (4) | 0.0750 (3) | 0.0344 (13) | |
C7 | 0.3908 (6) | 0.1281 (5) | 0.0063 (4) | 0.0518 (16) | |
H7 | 0.4868 | 0.1222 | 0.0040 | 0.062* | |
C8 | 0.2952 (6) | 0.0585 (5) | −0.0584 (4) | 0.0565 (17) | |
H8 | 0.3262 | 0.0045 | −0.1031 | 0.068* | |
C9 | 0.1541 (7) | 0.0688 (5) | −0.0572 (4) | 0.0590 (17) | |
H9 | 0.0895 | 0.0223 | −0.1014 | 0.071* | |
C10 | 0.1082 (6) | 0.1478 (5) | 0.0096 (4) | 0.0546 (16) | |
H10 | 0.0125 | 0.1551 | 0.0104 | 0.065* | |
C11 | 0.2042 (6) | 0.2160 (4) | 0.0753 (4) | 0.0436 (15) | |
H11 | 0.1725 | 0.2690 | 0.1205 | 0.052* | |
C12 | 0.4498 (5) | 0.2132 (4) | 0.2406 (3) | 0.0322 (13) | |
C13 | 0.3367 (5) | 0.1100 (4) | 0.2397 (3) | 0.0351 (13) | |
C14 | 0.2062 (6) | 0.1236 (5) | 0.2759 (4) | 0.0567 (17) | |
H14 | 0.1877 | 0.1954 | 0.3020 | 0.068* | |
C15 | 0.1037 (7) | 0.0290 (6) | 0.2726 (4) | 0.0675 (19) | |
H15 | 0.0167 | 0.0376 | 0.2975 | 0.081* | |
C16 | 0.1289 (7) | −0.0762 (6) | 0.2335 (5) | 0.077 (2) | |
H16 | 0.0588 | −0.1389 | 0.2304 | 0.093* | |
C17 | 0.2577 (7) | −0.0896 (5) | 0.1986 (5) | 0.072 (2) | |
H17 | 0.2765 | −0.1614 | 0.1730 | 0.086* | |
C18 | 0.3601 (6) | 0.0048 (5) | 0.2017 (4) | 0.0570 (17) | |
H18 | 0.4470 | −0.0045 | 0.1770 | 0.068* | |
C19 | 0.4813 (6) | 0.2929 (4) | 0.4068 (3) | 0.0455 (15) | |
H19A | 0.4783 | 0.3621 | 0.4511 | 0.055* | |
H19B | 0.4162 | 0.2327 | 0.4245 | 0.055* | |
C20 | 0.6388 (6) | 0.1716 (4) | 0.3368 (4) | 0.0469 (15) | |
H20A | 0.5837 | 0.1033 | 0.3497 | 0.056* | |
H20B | 0.7376 | 0.1611 | 0.3364 | 0.056* | |
C21 | 0.7120 (6) | 0.5325 (5) | 0.1933 (4) | 0.0530 (16) | |
H21A | 0.7130 | 0.4839 | 0.2379 | 0.064* | |
H21B | 0.6786 | 0.6012 | 0.2227 | 0.064* | |
C22 | 0.8592 (6) | 0.5619 (4) | 0.1653 (4) | 0.0482 (16) | |
C23 | 0.8900 (6) | 0.6050 (5) | 0.0882 (4) | 0.0577 (17) | |
H23 | 0.8157 | 0.6157 | 0.0505 | 0.069* | |
C24 | 1.0254 (7) | 0.6325 (5) | 0.0652 (5) | 0.068 (2) | |
H24 | 1.0400 | 0.6619 | 0.0124 | 0.081* | |
C25 | 1.1118 (7) | 0.5806 (6) | 0.1887 (5) | 0.073 (2) | |
H25 | 1.1882 | 0.5730 | 0.2261 | 0.088* | |
C26 | 0.9754 (8) | 0.5499 (6) | 0.2152 (5) | 0.075 (2) | |
H26 | 0.9635 | 0.5204 | 0.2682 | 0.090* | |
C27 | 0.7389 (6) | 0.3621 (5) | 0.4180 (4) | 0.0481 (15) | |
H27A | 0.7105 | 0.4275 | 0.4570 | 0.058* | |
H27B | 0.7554 | 0.3804 | 0.3582 | 0.058* | |
C28 | 0.8721 (5) | 0.3375 (4) | 0.4579 (4) | 0.0384 (14) | |
C29 | 1.0046 (6) | 0.3720 (4) | 0.4278 (4) | 0.0505 (16) | |
H29 | 1.0126 | 0.4087 | 0.3784 | 0.061* | |
C30 | 1.1231 (6) | 0.3516 (5) | 0.4715 (5) | 0.0576 (18) | |
H30 | 1.2098 | 0.3761 | 0.4491 | 0.069* | |
C31 | 0.9976 (8) | 0.2679 (6) | 0.5694 (5) | 0.084 (2) | |
H31 | 0.9927 | 0.2311 | 0.6189 | 0.101* | |
C32 | 0.8720 (7) | 0.2838 (6) | 0.5309 (5) | 0.0676 (19) | |
H32 | 0.7865 | 0.2582 | 0.5542 | 0.081* | |
C33 | 0.6754 (7) | 0.8554 (6) | 0.3853 (5) | 0.076 (2) | |
H33 | 0.6949 | 0.7839 | 0.4001 | 0.091* | |
Cl1 | 0.7802 (3) | 0.9693 (2) | 0.4618 (2) | 0.1451 (11) | |
Cl2 | 0.4992 (2) | 0.86364 (19) | 0.39764 (19) | 0.1222 (10) | |
Cl3 | 0.7234 (2) | 0.86119 (18) | 0.27531 (15) | 0.1061 (8) | |
N1 | 0.4182 (4) | 0.3843 (3) | 0.1924 (3) | 0.0370 (11) | |
N2 | 0.5961 (4) | 0.2785 (3) | 0.1304 (3) | 0.0380 (12) | |
N3 | 0.4351 (4) | 0.3080 (3) | 0.3151 (3) | 0.0349 (11) | |
N4 | 0.5925 (4) | 0.1866 (3) | 0.2456 (3) | 0.0342 (11) | |
N5 | 0.6126 (5) | 0.4746 (4) | 0.1154 (3) | 0.0446 (12) | |
N6 | 1.1383 (6) | 0.6195 (4) | 0.1144 (5) | 0.0697 (17) | |
N7 | 0.6238 (4) | 0.2652 (3) | 0.4087 (3) | 0.0388 (11) | |
N8 | 1.1278 (6) | 0.3010 (5) | 0.5420 (5) | 0.0756 (17) | |
S1 | 0.85378 (14) | 0.24229 (12) | 0.18583 (10) | 0.0545 (5) | |
S2 | 0.43168 (16) | 0.53272 (12) | 0.35358 (10) | 0.0527 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.042 (3) | 0.042 (3) | 0.044 (3) | 0.002 (3) | 0.006 (3) | 0.013 (3) |
C2 | 0.042 (3) | 0.056 (4) | 0.040 (3) | 0.002 (3) | 0.015 (3) | 0.009 (3) |
C3 | 0.026 (3) | 0.050 (4) | 0.046 (4) | 0.009 (3) | 0.014 (3) | 0.012 (3) |
C4 | 0.038 (3) | 0.028 (3) | 0.046 (3) | 0.004 (3) | 0.014 (3) | −0.006 (2) |
C5 | 0.025 (3) | 0.032 (3) | 0.031 (3) | 0.006 (2) | 0.004 (2) | 0.003 (2) |
C6 | 0.039 (3) | 0.032 (3) | 0.032 (3) | 0.001 (2) | 0.010 (3) | 0.006 (2) |
C7 | 0.039 (3) | 0.055 (4) | 0.052 (4) | −0.002 (3) | 0.013 (3) | −0.009 (3) |
C8 | 0.047 (4) | 0.063 (4) | 0.047 (4) | 0.000 (3) | 0.006 (3) | −0.012 (3) |
C9 | 0.061 (4) | 0.058 (4) | 0.046 (4) | −0.009 (3) | −0.003 (3) | −0.005 (3) |
C10 | 0.034 (3) | 0.055 (4) | 0.072 (5) | −0.003 (3) | −0.002 (3) | 0.014 (3) |
C11 | 0.042 (3) | 0.040 (3) | 0.046 (4) | 0.002 (3) | 0.014 (3) | 0.005 (3) |
C12 | 0.026 (3) | 0.032 (3) | 0.037 (3) | 0.001 (2) | 0.007 (2) | 0.005 (2) |
C13 | 0.035 (3) | 0.038 (3) | 0.034 (3) | −0.002 (3) | 0.000 (3) | 0.015 (2) |
C14 | 0.050 (4) | 0.060 (4) | 0.054 (4) | −0.006 (3) | 0.018 (3) | 0.007 (3) |
C15 | 0.046 (4) | 0.090 (5) | 0.058 (4) | −0.019 (4) | 0.009 (3) | 0.013 (4) |
C16 | 0.066 (5) | 0.066 (5) | 0.091 (5) | −0.026 (4) | 0.008 (4) | 0.020 (4) |
C17 | 0.066 (5) | 0.038 (4) | 0.104 (6) | −0.006 (3) | −0.002 (4) | 0.007 (4) |
C18 | 0.044 (4) | 0.039 (4) | 0.083 (5) | −0.007 (3) | 0.009 (3) | 0.009 (3) |
C19 | 0.053 (4) | 0.047 (3) | 0.036 (3) | 0.006 (3) | 0.014 (3) | 0.008 (3) |
C20 | 0.038 (3) | 0.039 (3) | 0.066 (4) | 0.008 (3) | 0.008 (3) | 0.013 (3) |
C21 | 0.050 (4) | 0.047 (4) | 0.053 (4) | −0.010 (3) | 0.012 (3) | 0.002 (3) |
C22 | 0.039 (4) | 0.040 (3) | 0.060 (4) | −0.006 (3) | 0.006 (3) | 0.004 (3) |
C23 | 0.041 (4) | 0.067 (4) | 0.066 (4) | 0.001 (3) | 0.012 (3) | 0.022 (3) |
C24 | 0.055 (4) | 0.070 (5) | 0.086 (5) | 0.008 (4) | 0.010 (4) | 0.034 (4) |
C25 | 0.034 (4) | 0.101 (6) | 0.083 (5) | 0.000 (4) | −0.019 (4) | 0.026 (5) |
C26 | 0.065 (5) | 0.082 (5) | 0.077 (5) | −0.017 (4) | 0.012 (4) | 0.032 (4) |
C27 | 0.051 (4) | 0.048 (4) | 0.044 (4) | 0.008 (3) | 0.002 (3) | 0.005 (3) |
C28 | 0.030 (3) | 0.040 (3) | 0.040 (3) | 0.003 (3) | −0.006 (3) | 0.000 (3) |
C29 | 0.040 (4) | 0.047 (4) | 0.057 (4) | −0.007 (3) | 0.009 (3) | 0.002 (3) |
C30 | 0.025 (3) | 0.064 (4) | 0.075 (5) | 0.006 (3) | −0.008 (3) | −0.006 (4) |
C31 | 0.069 (5) | 0.110 (6) | 0.084 (6) | 0.004 (5) | −0.016 (5) | 0.056 (5) |
C32 | 0.042 (4) | 0.085 (5) | 0.078 (5) | −0.004 (4) | 0.007 (4) | 0.031 (4) |
C33 | 0.083 (5) | 0.081 (5) | 0.075 (5) | 0.032 (4) | 0.004 (4) | 0.029 (4) |
Cl1 | 0.178 (3) | 0.1084 (19) | 0.139 (2) | 0.0305 (19) | −0.036 (2) | 0.0012 (17) |
Cl2 | 0.0895 (16) | 0.1205 (19) | 0.178 (2) | 0.0245 (14) | 0.0594 (16) | 0.0679 (17) |
Cl3 | 0.1197 (18) | 0.1078 (16) | 0.0969 (16) | 0.0181 (14) | 0.0459 (14) | 0.0292 (12) |
N1 | 0.041 (3) | 0.034 (2) | 0.034 (3) | 0.003 (2) | 0.012 (2) | 0.0037 (19) |
N2 | 0.029 (3) | 0.039 (3) | 0.044 (3) | −0.001 (2) | 0.013 (2) | 0.005 (2) |
N3 | 0.033 (2) | 0.038 (3) | 0.032 (3) | 0.003 (2) | 0.011 (2) | 0.0018 (19) |
N4 | 0.028 (2) | 0.032 (2) | 0.040 (3) | 0.0028 (19) | 0.003 (2) | 0.0026 (19) |
N5 | 0.041 (3) | 0.044 (3) | 0.046 (3) | −0.004 (2) | 0.011 (2) | 0.010 (2) |
N6 | 0.062 (4) | 0.056 (3) | 0.090 (5) | −0.003 (3) | 0.027 (4) | 0.017 (3) |
N7 | 0.030 (2) | 0.043 (3) | 0.042 (3) | 0.003 (2) | 0.002 (2) | 0.008 (2) |
N8 | 0.057 (4) | 0.079 (4) | 0.095 (5) | 0.019 (3) | −0.005 (4) | 0.021 (4) |
S1 | 0.0312 (8) | 0.0584 (10) | 0.0680 (11) | 0.0046 (7) | 0.0157 (8) | −0.0022 (8) |
S2 | 0.0588 (10) | 0.0434 (9) | 0.0501 (9) | 0.0087 (8) | 0.0122 (8) | −0.0072 (7) |
C1—N5 | 1.456 (6) | C18—H18 | 0.9300 |
C1—N1 | 1.479 (6) | C19—N7 | 1.449 (6) |
C1—H1A | 0.9700 | C19—N3 | 1.474 (6) |
C1—H1B | 0.9700 | C19—H19A | 0.9700 |
C2—N5 | 1.462 (6) | C19—H19B | 0.9700 |
C2—N2 | 1.472 (6) | C20—N7 | 1.434 (6) |
C2—H2A | 0.9700 | C20—N4 | 1.466 (7) |
C2—H2B | 0.9700 | C20—H20A | 0.9700 |
C3—N1 | 1.366 (6) | C20—H20B | 0.9700 |
C3—N3 | 1.368 (6) | C21—N5 | 1.471 (7) |
C3—S2 | 1.656 (5) | C21—C22 | 1.488 (7) |
C4—N2 | 1.355 (6) | C21—H21A | 0.9700 |
C4—N4 | 1.386 (6) | C21—H21B | 0.9700 |
C4—S1 | 1.657 (5) | C22—C26 | 1.357 (8) |
C5—N2 | 1.457 (5) | C22—C23 | 1.372 (8) |
C5—N1 | 1.470 (5) | C23—C24 | 1.356 (8) |
C5—C6 | 1.527 (7) | C23—H23 | 0.9300 |
C5—C12 | 1.557 (7) | C24—N6 | 1.329 (8) |
C6—C11 | 1.376 (6) | C24—H24 | 0.9300 |
C6—C7 | 1.385 (6) | C25—N6 | 1.300 (8) |
C7—C8 | 1.373 (7) | C25—C26 | 1.390 (8) |
C7—H7 | 0.9300 | C25—H25 | 0.9300 |
C8—C9 | 1.370 (7) | C26—H26 | 0.9300 |
C8—H8 | 0.9300 | C27—N7 | 1.469 (6) |
C9—C10 | 1.374 (7) | C27—C28 | 1.481 (7) |
C9—H9 | 0.9300 | C27—H27A | 0.9700 |
C10—C11 | 1.377 (7) | C27—H27B | 0.9700 |
C10—H10 | 0.9300 | C28—C32 | 1.369 (8) |
C11—H11 | 0.9300 | C28—C29 | 1.386 (7) |
C12—N4 | 1.448 (6) | C29—C30 | 1.365 (8) |
C12—N3 | 1.467 (5) | C29—H29 | 0.9300 |
C12—C13 | 1.528 (6) | C30—N8 | 1.316 (8) |
C13—C18 | 1.350 (7) | C30—H30 | 0.9300 |
C13—C14 | 1.391 (6) | C31—N8 | 1.348 (8) |
C14—C15 | 1.389 (8) | C31—C32 | 1.368 (9) |
C14—H14 | 0.9300 | C31—H31 | 0.9300 |
C15—C16 | 1.361 (8) | C32—H32 | 0.9300 |
C15—H15 | 0.9300 | C33—Cl2 | 1.711 (6) |
C16—C17 | 1.367 (8) | C33—Cl3 | 1.724 (7) |
C16—H16 | 0.9300 | C33—Cl1 | 1.772 (8) |
C17—C18 | 1.386 (7) | C33—H33 | 0.9800 |
C17—H17 | 0.9300 | ||
N5—C1—N1 | 112.5 (4) | N7—C20—H20A | 108.9 |
N5—C1—H1A | 109.1 | N4—C20—H20A | 108.9 |
N1—C1—H1A | 109.1 | N7—C20—H20B | 108.9 |
N5—C1—H1B | 109.1 | N4—C20—H20B | 108.9 |
N1—C1—H1B | 109.1 | H20A—C20—H20B | 107.7 |
H1A—C1—H1B | 107.8 | N5—C21—C22 | 112.7 (4) |
N5—C2—N2 | 111.2 (4) | N5—C21—H21A | 109.0 |
N5—C2—H2A | 109.4 | C22—C21—H21A | 109.0 |
N2—C2—H2A | 109.4 | N5—C21—H21B | 109.0 |
N5—C2—H2B | 109.4 | C22—C21—H21B | 109.0 |
N2—C2—H2B | 109.4 | H21A—C21—H21B | 107.8 |
H2A—C2—H2B | 108.0 | C26—C22—C23 | 114.0 (6) |
N1—C3—N3 | 108.0 (4) | C26—C22—C21 | 122.6 (6) |
N1—C3—S2 | 126.4 (4) | C23—C22—C21 | 123.4 (6) |
N3—C3—S2 | 125.4 (4) | C24—C23—C22 | 122.0 (6) |
N2—C4—N4 | 108.0 (4) | C24—C23—H23 | 119.0 |
N2—C4—S1 | 126.5 (4) | C22—C23—H23 | 119.0 |
N4—C4—S1 | 125.4 (5) | N6—C24—C23 | 123.4 (6) |
N2—C5—N1 | 108.9 (4) | N6—C24—H24 | 118.3 |
N2—C5—C6 | 111.8 (3) | C23—C24—H24 | 118.3 |
N1—C5—C6 | 112.8 (4) | N6—C25—C26 | 123.5 (7) |
N2—C5—C12 | 103.1 (4) | N6—C25—H25 | 118.2 |
N1—C5—C12 | 103.9 (3) | C26—C25—H25 | 118.2 |
C6—C5—C12 | 115.6 (4) | C22—C26—C25 | 121.4 (6) |
C11—C6—C7 | 118.3 (5) | C22—C26—H26 | 119.3 |
C11—C6—C5 | 120.8 (4) | C25—C26—H26 | 119.3 |
C7—C6—C5 | 120.4 (4) | N7—C27—C28 | 111.6 (4) |
C8—C7—C6 | 120.9 (5) | N7—C27—H27A | 109.3 |
C8—C7—H7 | 119.5 | C28—C27—H27A | 109.3 |
C6—C7—H7 | 119.5 | N7—C27—H27B | 109.3 |
C9—C8—C7 | 120.0 (5) | C28—C27—H27B | 109.3 |
C9—C8—H8 | 120.0 | H27A—C27—H27B | 108.0 |
C7—C8—H8 | 120.0 | C32—C28—C29 | 115.7 (6) |
C8—C9—C10 | 119.9 (6) | C32—C28—C27 | 121.4 (5) |
C8—C9—H9 | 120.0 | C29—C28—C27 | 122.8 (5) |
C10—C9—H9 | 120.0 | C30—C29—C28 | 119.3 (6) |
C9—C10—C11 | 119.8 (5) | C30—C29—H29 | 120.3 |
C9—C10—H10 | 120.1 | C28—C29—H29 | 120.3 |
C11—C10—H10 | 120.1 | N8—C30—C29 | 126.9 (6) |
C6—C11—C10 | 121.0 (5) | N8—C30—H30 | 116.5 |
C6—C11—H11 | 119.5 | C29—C30—H30 | 116.5 |
C10—C11—H11 | 119.5 | N8—C31—C32 | 125.7 (7) |
N4—C12—N3 | 109.6 (4) | N8—C31—H31 | 117.2 |
N4—C12—C13 | 112.3 (4) | C32—C31—H31 | 117.2 |
N3—C12—C13 | 112.3 (3) | C31—C32—C28 | 120.0 (6) |
N4—C12—C5 | 103.0 (3) | C31—C32—H32 | 120.0 |
N3—C12—C5 | 101.7 (4) | C28—C32—H32 | 120.0 |
C13—C12—C5 | 116.9 (4) | Cl2—C33—Cl3 | 112.1 (4) |
C18—C13—C14 | 119.0 (5) | Cl2—C33—Cl1 | 109.7 (4) |
C18—C13—C12 | 120.8 (4) | Cl3—C33—Cl1 | 108.3 (4) |
C14—C13—C12 | 120.2 (4) | Cl2—C33—H33 | 108.9 |
C15—C14—C13 | 119.3 (5) | Cl3—C33—H33 | 108.9 |
C15—C14—H14 | 120.4 | Cl1—C33—H33 | 108.9 |
C13—C14—H14 | 120.4 | C3—N1—C5 | 111.1 (4) |
C16—C15—C14 | 120.8 (6) | C3—N1—C1 | 123.0 (4) |
C16—C15—H15 | 119.6 | C5—N1—C1 | 114.7 (3) |
C14—C15—H15 | 119.6 | C4—N2—C5 | 112.7 (4) |
C15—C16—C17 | 119.8 (6) | C4—N2—C2 | 126.8 (4) |
C15—C16—H16 | 120.1 | C5—N2—C2 | 116.3 (4) |
C17—C16—H16 | 120.1 | C3—N3—C12 | 113.4 (4) |
C16—C17—C18 | 119.5 (6) | C3—N3—C19 | 127.7 (4) |
C16—C17—H17 | 120.3 | C12—N3—C19 | 114.3 (4) |
C18—C17—H17 | 120.3 | C4—N4—C12 | 111.8 (4) |
C13—C18—C17 | 121.6 (5) | C4—N4—C20 | 124.5 (4) |
C13—C18—H18 | 119.2 | C12—N4—C20 | 113.6 (4) |
C17—C18—H18 | 119.2 | C1—N5—C2 | 110.7 (4) |
N7—C19—N3 | 111.8 (4) | C1—N5—C21 | 113.8 (4) |
N7—C19—H19A | 109.3 | C2—N5—C21 | 113.6 (4) |
N3—C19—H19A | 109.3 | C25—N6—C24 | 115.7 (6) |
N7—C19—H19B | 109.3 | C20—N7—C19 | 111.5 (4) |
N3—C19—H19B | 109.3 | C20—N7—C27 | 114.4 (4) |
H19A—C19—H19B | 107.9 | C19—N7—C27 | 115.4 (4) |
N7—C20—N4 | 113.5 (4) | C30—N8—C31 | 112.4 (6) |
N2—C5—C6—C11 | −162.1 (4) | C12—C5—N1—C3 | 12.7 (5) |
N1—C5—C6—C11 | −38.9 (6) | N2—C5—N1—C1 | 48.5 (6) |
C12—C5—C6—C11 | 80.4 (6) | C6—C5—N1—C1 | −76.3 (5) |
N2—C5—C6—C7 | 26.4 (7) | C12—C5—N1—C1 | 157.8 (4) |
N1—C5—C6—C7 | 149.6 (4) | N5—C1—N1—C3 | 87.6 (5) |
C12—C5—C6—C7 | −91.1 (5) | N5—C1—N1—C5 | −52.9 (6) |
C11—C6—C7—C8 | −1.8 (8) | N4—C4—N2—C5 | 8.2 (5) |
C5—C6—C7—C8 | 170.0 (5) | S1—C4—N2—C5 | −175.2 (3) |
C6—C7—C8—C9 | 1.8 (9) | N4—C4—N2—C2 | 163.9 (4) |
C7—C8—C9—C10 | −0.8 (10) | S1—C4—N2—C2 | −19.5 (7) |
C8—C9—C10—C11 | −0.3 (9) | N1—C5—N2—C4 | 108.8 (4) |
C7—C6—C11—C10 | 0.7 (8) | C6—C5—N2—C4 | −125.8 (4) |
C5—C6—C11—C10 | −171.0 (5) | C12—C5—N2—C4 | −1.1 (5) |
C9—C10—C11—C6 | 0.4 (9) | N1—C5—N2—C2 | −49.6 (5) |
N2—C5—C12—N4 | −5.9 (4) | C6—C5—N2—C2 | 75.7 (5) |
N1—C5—C12—N4 | −119.5 (4) | C12—C5—N2—C2 | −159.5 (4) |
C6—C5—C12—N4 | 116.3 (4) | N5—C2—N2—C4 | −101.2 (5) |
N2—C5—C12—N3 | 107.6 (4) | N5—C2—N2—C5 | 53.7 (6) |
N1—C5—C12—N3 | −6.0 (4) | N1—C3—N3—C12 | 10.3 (5) |
C6—C5—C12—N3 | −130.1 (4) | S2—C3—N3—C12 | −173.6 (3) |
N2—C5—C12—C13 | −129.7 (4) | N1—C3—N3—C19 | 164.3 (4) |
N1—C5—C12—C13 | 116.7 (4) | S2—C3—N3—C19 | −19.6 (7) |
C6—C5—C12—C13 | −7.4 (5) | N4—C12—N3—C3 | 106.3 (5) |
N4—C12—C13—C18 | −31.2 (7) | C13—C12—N3—C3 | −128.0 (4) |
N3—C12—C13—C18 | −155.3 (5) | C5—C12—N3—C3 | −2.2 (5) |
C5—C12—C13—C18 | 87.6 (6) | N4—C12—N3—C19 | −51.3 (5) |
N4—C12—C13—C14 | 150.7 (5) | C13—C12—N3—C19 | 74.4 (5) |
N3—C12—C13—C14 | 26.6 (7) | C5—C12—N3—C19 | −159.8 (4) |
C5—C12—C13—C14 | −90.4 (5) | N7—C19—N3—C3 | −101.1 (5) |
C18—C13—C14—C15 | 0.4 (9) | N7—C19—N3—C12 | 52.7 (5) |
C12—C13—C14—C15 | 178.6 (5) | N2—C4—N4—C12 | −12.5 (5) |
C13—C14—C15—C16 | −0.9 (10) | S1—C4—N4—C12 | 170.8 (3) |
C14—C15—C16—C17 | 1.4 (11) | N2—C4—N4—C20 | −155.4 (4) |
C15—C16—C17—C18 | −1.5 (11) | S1—C4—N4—C20 | 27.9 (6) |
C14—C13—C18—C17 | −0.5 (9) | N3—C12—N4—C4 | −96.3 (4) |
C12—C13—C18—C17 | −178.6 (5) | C13—C12—N4—C4 | 138.1 (4) |
C16—C17—C18—C13 | 1.1 (10) | C5—C12—N4—C4 | 11.3 (5) |
N5—C21—C22—C26 | −139.0 (6) | N3—C12—N4—C20 | 50.8 (5) |
N5—C21—C22—C23 | 42.0 (7) | C13—C12—N4—C20 | −74.8 (5) |
C26—C22—C23—C24 | 0.0 (9) | C5—C12—N4—C20 | 158.5 (4) |
C21—C22—C23—C24 | 179.1 (5) | N7—C20—N4—C4 | 89.0 (5) |
C22—C23—C24—N6 | 0.5 (10) | N7—C20—N4—C12 | −53.3 (5) |
C23—C22—C26—C25 | 0.7 (9) | N1—C1—N5—C2 | 53.9 (6) |
C21—C22—C26—C25 | −178.4 (5) | N1—C1—N5—C21 | −75.5 (6) |
N6—C25—C26—C22 | −2.0 (11) | N2—C2—N5—C1 | −53.5 (6) |
N7—C27—C28—C32 | −43.3 (7) | N2—C2—N5—C21 | 76.0 (5) |
N7—C27—C28—C29 | 140.3 (5) | C22—C21—N5—C1 | −165.7 (4) |
C32—C28—C29—C30 | −0.2 (8) | C22—C21—N5—C2 | 66.4 (6) |
C27—C28—C29—C30 | 176.3 (5) | C26—C25—N6—C24 | 2.3 (10) |
C28—C29—C30—N8 | −0.1 (9) | C23—C24—N6—C25 | −1.6 (10) |
N8—C31—C32—C28 | 0.0 (12) | N4—C20—N7—C19 | 52.5 (6) |
C29—C28—C32—C31 | 0.3 (9) | N4—C20—N7—C27 | −80.7 (5) |
C27—C28—C32—C31 | −176.3 (6) | N3—C19—N7—C20 | −51.7 (5) |
N3—C3—N1—C5 | −14.4 (5) | N3—C19—N7—C27 | 81.0 (5) |
S2—C3—N1—C5 | 169.5 (3) | C28—C27—N7—C20 | −72.7 (5) |
N3—C3—N1—C1 | −156.2 (4) | C28—C27—N7—C19 | 155.9 (4) |
S2—C3—N1—C1 | 27.7 (6) | C29—C30—N8—C31 | 0.4 (9) |
N2—C5—N1—C3 | −96.7 (5) | C32—C31—N8—C30 | −0.3 (11) |
C6—C5—N1—C3 | 138.6 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
C33—H33···N8i | 0.98 | 2.33 | 3.168 (9) | 142 (8) |
Symmetry code: (i) −x+2, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C32H30N8S2·CHCl3 |
Mr | 710.13 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 294 |
a, b, c (Å) | 9.5381 (6), 12.1712 (8), 14.8765 (9) |
α, β, γ (°) | 100.978 (1), 91.699 (1), 98.500 (1) |
V (Å3) | 1673.81 (18) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.44 |
Crystal size (mm) | 0.20 × 0.10 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11061, 5690, 2136 |
Rint | 0.109 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.062, 0.210, 0.85 |
No. of reflections | 5690 |
No. of parameters | 415 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.47, −0.39 |
Computer programs: SMART (Bruker, 1997), SAINT (Bruker, 1999), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C33—H33···N8i | 0.979 | 2.332 | 3.168 (9) | 142 (8) |
Symmetry code: (i) −x+2, −y+1, −z+1. |
Acknowledgements
The authors are grateful to the Central China Normal University for financial support and to Dr Xiang-Gao Meng for the X-ray data collection.
References
Broan, C. J., Butler, A. R., Reed, D. & Sadler, I. H. (1989). J. Chem. Soc. Perkin Trans. 2, pp. 731–740. CrossRef Google Scholar
Bruker (1997). SMART. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruker (1999). SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Li, Y. T., Meng, X. G., Cao, L. P., Wang, Y. Z., Yin, G. D., Gao, M., Wen, L. L. & Wu, A. X. (2008). Cryst. Growth Des. 8, 1645–1653. Web of Science CSD CrossRef Google Scholar
Rowan, A. E., Elemans, J. A. A. W. & Nolte, R. J. M. (1999). Acc. Chem. Res. 32, 995–1006. Web of Science CrossRef CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Recently, molecular clips based on concave glycoluril unit have been widely investigated in supramolecular chemistry (Rowan et al., 1999). We report here the structure of the title compound (Fig. 1), which is a derivative of thioglycoluril with two pyridine units. We believe the title compound would offer the possibility in construction of coordination framework with novel patterns (Li et al., 2008). The crystal packing exhibits weak intermolecular C—H···N hydrogen bond (Table 1) between the chloroform solvent molecule and the main molecule.