organic compounds
(1R,6R,13R,18R)-(Z,Z)-1,18-Bis[(4R)-2,2-dimethyl-1,3-dioxolan-4-yl]-3,16-dimethylene-8,20-diazadispiro[5.6.5.6]tetracosa-7,19-diene
aDepartment of Chemistry, The University of Auckland, Private Bag 92019, Auckland, New Zealand
*Correspondence e-mail: m.brimble@auckland.ac.nz
The 34H54N2O4, has been solved in order to prove the relative and absolute of the newly-formed stereocentres which were established using an asymmetric Diels–Alder reaction at an earlier stage in the synthesis. This unprecedented stable dialdimine contains a 14-membered ring and was obtained as the minor diastereoisomer in the Diels–Alder reaction. The absolute stereochemistry of the stereocentres of the acetal functionality was known to be R based on the use of a chiral (R)-trisubstituted derived from enantiopure (S)-glyceraldehyde. The assignment of the configuration in the and the title di-aldimine differs from (S)-glyceraldehyde due to a change in the priority order of the substituents. The establishes the presence of six stereocentres all attributed to be R. The 14-membered ring contains two aldimine bonds [C—N = 1.258 (2) and 1.259 (2) Å]. It adopts a similar conformation to that proposed for trans–trans-cyclotetradeca-1,8-dienes.
of the title compound, CRelated literature
For related structures, see: Allmann (1974); Dale (1966). For background to the spirolide family, see: Gill et al. (2003); Guéret & Brimble (2010); Hu et al. (1995, 2001). For the applications of Danishefsky's diene, see: Asano et al. (2006); Danishefsky et al. (1990); Petrzilka & Grayson (1981).
Experimental
Crystal data
|
Data collection: SMART (Siemens, 1995); cell SAINT (Siemens, 1995); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996), ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2006); software used to prepare material for publication: WinGX (Farrugia, 1999) and publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536810023998/dn2578sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810023998/dn2578Isup2.hkl
To 2-(2",2"-dimethyl-1",3"-dioxolan-4"-yl)-4-methylene-1-(4'-azidobutyl)cyclohexane carbaldehyde (7.8 mg, 24 µmol) in toluene-d8 (0.6 ml) was added triphenylphosphine (6.3 mg, 24 µmol). The resulting mixture was stirred for 1 h at room temperature then warmed to 55 °C and stirred at this temperature for 17 h. After cooling to room temperature, the mixture was concentrated in vacuo. The crude imine was purified by
(20: 80 EtOAc–hexanes) to give the title compound (4.6 mg, 71%) as a white crystalline solid. Dilution in CH2Cl2/hexanes (1: 1, 2 ml) and slow evaporation of the solvent afforded white prisms.M. P. 171.8–172.3 °C.
HRMS (ESI) calculated for C34H55N2O4 [M + H]+: 555.4156, found 555.4143.
IR (neat) νmax 3060, 2985, 2935, 1675, 1635, 1610, 1455, 1380, 1195, 1065, 895 cm-1.
1H NMR (400 MHz, CDCl3) δ 7.49 (2H, s, 7 and 14-CH=N), 4.60 (4 H, d,J = 28 Hz, 25 and 31-CH2=C), 4.10 (4 H, m, 26 and 32-CH and 27 and 33-CHaHb), 3.60 (2 H, m, 27 and 33-CHaHb), 3.47 (2 H, m, 9 and 16-CHaHb), 3.38 (2 H, m, 9 and 16-CHaHb), 2.23 (2 H, dd, J = 4 and 12 Hz, 2 and 21-CHaHb), 2.11 (6 H, t, J = 4 Hz, 1 and 20-CH and 4 and 23-CH2), 1.94 (2 H, dd, J = 8 and 12 Hz, 2 and 21-CHaHb), 1.71 (6 H, m, 5 and 24-CH2 and 12 and 19-CHaHb), 1.61 (4 H, m, 12 and 19-CHaHb and 10 and 17-CHaHb), 1.45 (2 H, td, J = 4 and 12 Hz, 10 and 17-CHaHb), 1.34 (6 H, s, 29 or 30-CH3 and 35 or 36-CH3), 1.34 (6 H, s, 29 or 30-CH3 and 35 or 36-CH3), 1.22 (2 H, m, 11 and 18-CHaHb), 1.09 (11 and 18-CHaHb).
13C NMR (100 MHz, CDCl3) δ 171.8 (7 and 14-CH=N), 146.7 (3 and 22-C), 108.4 (28 and 34-C), 108.1 (25 and 31-CH2), 76.1 (26 and 32-CHO), 68.6 (27 and 33-CH2O), 60.9 (9 and 16-CH2N), 45.5 (6 and 25-C), 44.6 (1 and 20-CH), 33.4 (12 and 19-CH2), 33.2 (5 and 24-CH2), 33.1 (2 and 21-CH2), 30.9 (4 and 23-CH2), 29.9 (10 and 17-CH2), 26.7 (29 or 30-CH3 and 35 or 36-CH3), 26,3 (29 or 30-CH3 and 35 or 36-CH3), 21.5 (11 and 18-CH2).
m/z (ESI-MS) 195 ([M]+, 100), 278 (40), 220 (12%).
[α]D20 -25.5 (c 1/5, CH2Cl2).
In the absence of significant
the could not be reliably determined from the X-ray analyses and then the Friedel pairs were merged and any references to the were removed.Atoms were placed in calculated positions and a riding model (C–H = 0.93 or 0.97 Å), with Uiso(H) = 1.2 or 1.5 times Ueq(C) was used during refinement.
Data collection: SMART (Siemens, 1995); cell
SAINT (Siemens, 1995); data reduction: SAINT (Siemens, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996), ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2006); software used to prepare material for publication: WinGX (Farrugia, 1999) and publCIF (Westrip, 2010).C34H54N2O4 | Z = 1 |
Mr = 554.80 | F(000) = 304 |
Triclinic, P1 | Dx = 1.145 Mg m−3 |
Hall symbol: P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.8710 (1) Å | Cell parameters from 6455 reflections |
b = 10.1701 (2) Å | θ = 1.8–27.9° |
c = 11.7947 (2) Å | µ = 0.07 mm−1 |
α = 79.143 (1)° | T = 93 K |
β = 88.043 (1)° | Needle, colourless |
γ = 83.855 (1)° | 0.36 × 0.19 × 0.1 mm |
V = 804.71 (2) Å3 |
Siemens SMART CCD diffractometer | 3555 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.042 |
Graphite monochromator | θmax = 27.9°, θmin = 1.8° |
ω scans | h = −9→9 |
19146 measured reflections | k = −13→13 |
3824 independent reflections | l = −15→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.035 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.091 | H-atom parameters constrained |
S = 0.92 | w = 1/[σ2(Fo2) + (0.0645P)2 + 0.1019P] where P = (Fo2 + 2Fc2)/3 |
3824 reflections | (Δ/σ)max < 0.001 |
365 parameters | Δρmax = 0.28 e Å−3 |
3 restraints | Δρmin = −0.18 e Å−3 |
C34H54N2O4 | γ = 83.855 (1)° |
Mr = 554.80 | V = 804.71 (2) Å3 |
Triclinic, P1 | Z = 1 |
a = 6.8710 (1) Å | Mo Kα radiation |
b = 10.1701 (2) Å | µ = 0.07 mm−1 |
c = 11.7947 (2) Å | T = 93 K |
α = 79.143 (1)° | 0.36 × 0.19 × 0.1 mm |
β = 88.043 (1)° |
Siemens SMART CCD diffractometer | 3555 reflections with I > 2σ(I) |
19146 measured reflections | Rint = 0.042 |
3824 independent reflections |
R[F2 > 2σ(F2)] = 0.035 | 3 restraints |
wR(F2) = 0.091 | H-atom parameters constrained |
S = 0.92 | Δρmax = 0.28 e Å−3 |
3824 reflections | Δρmin = −0.18 e Å−3 |
365 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. Three restraints for a floating origins were used. |
x | y | z | Uiso*/Ueq | ||
C5 | 0.4859 (3) | −0.46661 (18) | 0.09602 (16) | 0.0179 (3) | |
H1A | 0.6114 | −0.4649 | 0.0558 | 0.021* | |
H1B | 0.5112 | −0.4882 | 0.1782 | 0.021* | |
C4 | 0.3776 (3) | −0.57809 (18) | 0.06285 (17) | 0.0213 (4) | |
H2A | 0.3781 | −0.5684 | −0.0206 | 0.026* | |
H2B | 0.4463 | −0.6650 | 0.0942 | 0.026* | |
C3 | 0.1690 (3) | −0.57332 (19) | 0.10718 (17) | 0.0220 (4) | |
C2 | 0.0573 (3) | −0.43578 (19) | 0.07628 (17) | 0.0203 (4) | |
H4A | −0.0731 | −0.4383 | 0.1103 | 0.024* | |
H4B | 0.0441 | −0.4122 | −0.0069 | 0.024* | |
C1 | 0.1606 (3) | −0.32679 (18) | 0.11917 (16) | 0.0157 (3) | |
H5 | 0.0887 | −0.2394 | 0.0889 | 0.019* | |
C6 | 0.3720 (3) | −0.32518 (17) | 0.06741 (15) | 0.0154 (3) | |
C19 | 0.4921 (3) | −0.22460 (17) | 0.11200 (15) | 0.0168 (3) | |
H7A | 0.5030 | −0.2515 | 0.1951 | 0.020* | |
H7B | 0.6233 | −0.2327 | 0.0793 | 0.020* | |
C18 | 0.4100 (3) | −0.07590 (18) | 0.08484 (16) | 0.0181 (4) | |
H8A | 0.4276 | −0.0419 | 0.0030 | 0.022* | |
H8B | 0.2705 | −0.0689 | 0.1019 | 0.022* | |
C17 | 0.5083 (3) | 0.01164 (19) | 0.15356 (16) | 0.0217 (4) | |
H9A | 0.4320 | 0.0988 | 0.1453 | 0.026* | |
H9B | 0.5053 | −0.0297 | 0.2346 | 0.026* | |
C16 | 0.7199 (3) | 0.03345 (19) | 0.11786 (16) | 0.0204 (4) | |
H10A | 0.7725 | 0.0862 | 0.1679 | 0.024* | |
H10B | 0.7985 | −0.0529 | 0.1267 | 0.024* | |
C14 | 0.8639 (3) | 0.05893 (18) | −0.06562 (16) | 0.0172 (3) | |
H11 | 0.9483 | −0.0144 | −0.0314 | 0.021* | |
C13 | 0.8986 (3) | 0.11417 (17) | −0.19270 (15) | 0.0158 (3) | |
C12 | 0.8646 (3) | −0.00132 (17) | −0.25696 (15) | 0.0166 (3) | |
H13A | 0.8760 | 0.0318 | −0.3393 | 0.020* | |
H13B | 0.9680 | −0.0739 | −0.2363 | 0.020* | |
C11 | 0.6682 (3) | −0.05878 (18) | −0.23246 (16) | 0.0185 (4) | |
H14A | 0.5636 | 0.0120 | −0.2564 | 0.022* | |
H14B | 0.6535 | −0.0900 | −0.1500 | 0.022* | |
C10 | 0.6486 (3) | −0.17543 (19) | −0.29504 (16) | 0.0211 (4) | |
H15A | 0.6386 | −0.1407 | −0.3773 | 0.025* | |
H15B | 0.7658 | −0.2383 | −0.2827 | 0.025* | |
C9 | 0.4705 (3) | −0.25019 (19) | −0.25415 (16) | 0.0200 (4) | |
H16A | 0.3527 | −0.1878 | −0.2649 | 0.024* | |
H16B | 0.4596 | −0.3191 | −0.2997 | 0.024* | |
C7 | 0.3587 (3) | −0.27786 (17) | −0.06275 (15) | 0.0168 (3) | |
H17 | 0.2497 | −0.2210 | −0.0922 | 0.020* | |
C24 | 1.1175 (3) | 0.13759 (19) | −0.20847 (16) | 0.0186 (4) | |
H24A | 1.1966 | 0.0552 | −0.1758 | 0.022* | |
H24B | 1.1485 | 0.1584 | −0.2903 | 0.022* | |
C23 | 1.1716 (3) | 0.2520 (2) | −0.15120 (18) | 0.0228 (4) | |
H19A | 1.1577 | 0.2268 | −0.0680 | 0.027* | |
H19B | 1.3070 | 0.2674 | −0.1692 | 0.027* | |
C22 | 1.0408 (3) | 0.37918 (19) | −0.19363 (17) | 0.0215 (4) | |
C21 | 0.8255 (3) | 0.36185 (18) | −0.17768 (16) | 0.0192 (4) | |
H21A | 0.7500 | 0.4456 | −0.2108 | 0.023* | |
H21B | 0.7945 | 0.3424 | −0.0958 | 0.023* | |
C20 | 0.7648 (3) | 0.24717 (17) | −0.23484 (15) | 0.0161 (3) | |
H22 | 0.6311 | 0.2313 | −0.2085 | 0.019* | |
C25 | 0.0869 (4) | −0.6775 (2) | 0.1672 (2) | 0.0326 (5) | |
H23A | 0.1591 | −0.7612 | 0.1848 | 0.039* | |
H23B | −0.0430 | −0.6667 | 0.1917 | 0.039* | |
C26 | 0.1524 (3) | −0.34631 (18) | 0.25092 (15) | 0.0177 (3) | |
H24 | 0.2561 | −0.4151 | 0.2841 | 0.021* | |
C27 | −0.0430 (3) | −0.3762 (2) | 0.30981 (17) | 0.0253 (4) | |
H25A | −0.1517 | −0.3269 | 0.2644 | 0.030* | |
H25B | −0.0578 | −0.4716 | 0.3225 | 0.030* | |
C28 | 0.0987 (3) | −0.2278 (2) | 0.39969 (16) | 0.0252 (4) | |
C29 | −0.0117 (5) | −0.0934 (3) | 0.4064 (2) | 0.0448 (7) | |
H27A | −0.0607 | −0.0939 | 0.4837 | 0.067* | |
H27B | −0.1193 | −0.0765 | 0.3540 | 0.067* | |
H27C | 0.0743 | −0.0240 | 0.3858 | 0.067* | |
C30 | 0.2597 (4) | −0.2692 (3) | 0.4873 (2) | 0.0409 (6) | |
H28A | 0.3296 | −0.3527 | 0.4758 | 0.061* | |
H28B | 0.2036 | −0.2803 | 0.5637 | 0.061* | |
H28C | 0.3482 | −0.2009 | 0.4780 | 0.061* | |
C31 | 1.1091 (3) | 0.4943 (2) | −0.2410 (2) | 0.0293 (4) | |
H29A | 1.2434 | 0.4991 | −0.2492 | 0.035* | |
H29B | 1.0228 | 0.5704 | −0.2660 | 0.035* | |
C32 | 0.7610 (3) | 0.28862 (18) | −0.36663 (16) | 0.0186 (4) | |
H30 | 0.8924 | 0.2709 | −0.3990 | 0.022* | |
C33 | 0.6765 (3) | 0.4318 (2) | −0.41643 (17) | 0.0232 (4) | |
H31A | 0.5655 | 0.4606 | −0.3708 | 0.028* | |
H31B | 0.7745 | 0.4945 | −0.4207 | 0.028* | |
C34 | 0.5546 (3) | 0.28908 (19) | −0.52033 (16) | 0.0232 (4) | |
C36 | 0.3332 (3) | 0.2966 (2) | −0.5167 (2) | 0.0309 (5) | |
H33A | 0.2833 | 0.3430 | −0.4564 | 0.046* | |
H33B | 0.2935 | 0.2072 | −0.5020 | 0.046* | |
H33C | 0.2825 | 0.3443 | −0.5895 | 0.046* | |
C35 | 0.6449 (4) | 0.2274 (2) | −0.61933 (19) | 0.0352 (5) | |
H34A | 0.6040 | 0.1391 | −0.6145 | 0.053* | |
H34B | 0.7850 | 0.2209 | −0.6152 | 0.053* | |
H34C | 0.6031 | 0.2829 | −0.6912 | 0.053* | |
N15 | 0.7312 (2) | 0.10360 (16) | −0.00257 (14) | 0.0188 (3) | |
N8 | 0.4889 (2) | −0.31236 (15) | −0.13220 (13) | 0.0183 (3) | |
O1 | −0.0310 (2) | −0.33110 (17) | 0.41672 (13) | 0.0323 (4) | |
O2 | 0.1763 (2) | −0.22053 (14) | 0.28513 (11) | 0.0225 (3) | |
O3 | 0.6256 (2) | 0.21281 (14) | −0.41259 (12) | 0.0250 (3) | |
O4 | 0.6178 (2) | 0.42036 (14) | −0.52929 (12) | 0.0261 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C5 | 0.0147 (8) | 0.0156 (8) | 0.0226 (9) | −0.0016 (7) | −0.0016 (7) | −0.0012 (7) |
C4 | 0.0204 (9) | 0.0150 (8) | 0.0286 (10) | −0.0041 (7) | 0.0015 (7) | −0.0036 (7) |
C3 | 0.0213 (10) | 0.0216 (9) | 0.0257 (10) | −0.0065 (7) | −0.0005 (8) | −0.0081 (7) |
C2 | 0.0145 (8) | 0.0245 (9) | 0.0235 (9) | −0.0059 (7) | −0.0016 (7) | −0.0066 (7) |
C1 | 0.0120 (8) | 0.0160 (7) | 0.0190 (8) | −0.0015 (6) | −0.0016 (6) | −0.0026 (6) |
C6 | 0.0138 (8) | 0.0144 (8) | 0.0181 (8) | −0.0028 (6) | −0.0007 (6) | −0.0023 (6) |
C19 | 0.0152 (8) | 0.0162 (8) | 0.0191 (8) | −0.0026 (7) | −0.0017 (7) | −0.0029 (7) |
C18 | 0.0173 (9) | 0.0176 (8) | 0.0189 (8) | −0.0023 (7) | 0.0006 (7) | −0.0022 (7) |
C17 | 0.0286 (10) | 0.0175 (9) | 0.0202 (9) | −0.0065 (7) | 0.0057 (8) | −0.0050 (7) |
C16 | 0.0259 (10) | 0.0197 (8) | 0.0172 (8) | −0.0076 (7) | 0.0013 (7) | −0.0048 (7) |
C14 | 0.0165 (9) | 0.0162 (8) | 0.0196 (8) | −0.0024 (7) | −0.0028 (7) | −0.0044 (7) |
C13 | 0.0152 (9) | 0.0155 (8) | 0.0177 (8) | −0.0030 (6) | 0.0009 (7) | −0.0049 (6) |
C12 | 0.0167 (8) | 0.0153 (8) | 0.0179 (8) | −0.0023 (7) | 0.0021 (7) | −0.0036 (6) |
C11 | 0.0191 (9) | 0.0166 (8) | 0.0206 (8) | −0.0039 (7) | 0.0023 (7) | −0.0046 (7) |
C10 | 0.0237 (9) | 0.0220 (9) | 0.0198 (8) | −0.0078 (7) | 0.0043 (7) | −0.0075 (7) |
C9 | 0.0239 (9) | 0.0202 (8) | 0.0182 (8) | −0.0075 (7) | 0.0004 (7) | −0.0064 (7) |
C7 | 0.0163 (9) | 0.0141 (8) | 0.0199 (8) | −0.0021 (7) | −0.0027 (7) | −0.0020 (6) |
C24 | 0.0131 (8) | 0.0202 (9) | 0.0230 (9) | −0.0020 (7) | 0.0022 (7) | −0.0052 (7) |
C23 | 0.0162 (9) | 0.0232 (9) | 0.0301 (10) | −0.0050 (7) | 0.0022 (8) | −0.0068 (8) |
C22 | 0.0226 (10) | 0.0216 (9) | 0.0226 (9) | −0.0061 (8) | 0.0028 (7) | −0.0087 (7) |
C21 | 0.0209 (9) | 0.0147 (8) | 0.0223 (9) | −0.0023 (7) | 0.0024 (7) | −0.0046 (7) |
C20 | 0.0145 (8) | 0.0156 (8) | 0.0180 (8) | −0.0030 (6) | 0.0024 (6) | −0.0022 (6) |
C25 | 0.0293 (11) | 0.0237 (10) | 0.0451 (13) | −0.0077 (8) | 0.0085 (10) | −0.0061 (9) |
C26 | 0.0191 (9) | 0.0159 (8) | 0.0176 (8) | −0.0039 (7) | −0.0003 (7) | −0.0008 (6) |
C27 | 0.0243 (10) | 0.0339 (11) | 0.0185 (9) | −0.0090 (8) | 0.0015 (8) | −0.0040 (8) |
C28 | 0.0303 (11) | 0.0298 (10) | 0.0159 (8) | −0.0079 (8) | 0.0021 (8) | −0.0032 (7) |
C29 | 0.0646 (18) | 0.0409 (13) | 0.0276 (11) | 0.0057 (12) | 0.0111 (11) | −0.0115 (10) |
C30 | 0.0420 (14) | 0.0545 (15) | 0.0261 (11) | −0.0148 (12) | −0.0092 (10) | 0.0001 (10) |
C31 | 0.0250 (10) | 0.0236 (10) | 0.0409 (12) | −0.0096 (8) | 0.0057 (9) | −0.0073 (9) |
C32 | 0.0189 (9) | 0.0162 (8) | 0.0205 (8) | −0.0044 (7) | 0.0006 (7) | −0.0015 (6) |
C33 | 0.0249 (10) | 0.0201 (9) | 0.0234 (9) | −0.0025 (8) | −0.0019 (8) | −0.0008 (7) |
C34 | 0.0277 (10) | 0.0212 (9) | 0.0186 (9) | −0.0031 (8) | −0.0005 (8) | 0.0025 (7) |
C36 | 0.0266 (11) | 0.0340 (11) | 0.0306 (11) | −0.0048 (9) | −0.0026 (9) | −0.0005 (9) |
C35 | 0.0470 (14) | 0.0316 (11) | 0.0243 (10) | 0.0027 (10) | 0.0038 (10) | −0.0028 (9) |
N15 | 0.0205 (8) | 0.0176 (7) | 0.0186 (7) | −0.0051 (6) | 0.0020 (6) | −0.0026 (6) |
N8 | 0.0202 (8) | 0.0151 (7) | 0.0209 (7) | −0.0064 (6) | 0.0011 (6) | −0.0044 (6) |
O1 | 0.0334 (9) | 0.0466 (10) | 0.0200 (7) | −0.0171 (7) | 0.0064 (6) | −0.0085 (7) |
O2 | 0.0295 (8) | 0.0223 (6) | 0.0174 (6) | −0.0072 (6) | 0.0051 (5) | −0.0067 (5) |
O3 | 0.0331 (8) | 0.0200 (6) | 0.0213 (7) | −0.0086 (6) | −0.0082 (6) | 0.0024 (5) |
O4 | 0.0322 (8) | 0.0218 (7) | 0.0220 (7) | −0.0065 (6) | −0.0028 (6) | 0.0039 (5) |
C5—C4 | 1.536 (3) | C24—C23 | 1.535 (3) |
C5—C6 | 1.546 (2) | C24—H24A | 0.9700 |
C5—H1A | 0.9700 | C24—H24B | 0.9700 |
C5—H1B | 0.9700 | C23—C22 | 1.506 (3) |
C4—C3 | 1.507 (3) | C23—H19A | 0.9700 |
C4—H2A | 0.9700 | C23—H19B | 0.9700 |
C4—H2B | 0.9700 | C22—C31 | 1.326 (3) |
C3—C25 | 1.327 (3) | C22—C21 | 1.509 (3) |
C3—C2 | 1.509 (3) | C21—C20 | 1.552 (2) |
C2—C1 | 1.547 (2) | C21—H21A | 0.9700 |
C2—H4A | 0.9700 | C21—H21B | 0.9700 |
C2—H4B | 0.9700 | C20—C32 | 1.532 (3) |
C1—C26 | 1.529 (2) | C20—H22 | 0.9800 |
C1—C6 | 1.557 (2) | C25—H23A | 0.9300 |
C1—H5 | 0.9800 | C25—H23B | 0.9300 |
C6—C7 | 1.523 (2) | C26—O2 | 1.439 (2) |
C6—C19 | 1.554 (2) | C26—C27 | 1.523 (3) |
C19—C18 | 1.535 (2) | C26—H24 | 0.9800 |
C19—H7A | 0.9700 | C27—O1 | 1.428 (2) |
C19—H7B | 0.9700 | C27—H25A | 0.9700 |
C18—C17 | 1.531 (3) | C27—H25B | 0.9700 |
C18—H8A | 0.9700 | C28—O2 | 1.427 (2) |
C18—H8B | 0.9700 | C28—O1 | 1.430 (3) |
C17—C16 | 1.527 (3) | C28—C29 | 1.505 (3) |
C17—H9A | 0.9700 | C28—C30 | 1.511 (3) |
C17—H9B | 0.9700 | C29—H27A | 0.9600 |
C16—N15 | 1.468 (2) | C29—H27B | 0.9600 |
C16—H10A | 0.9700 | C29—H27C | 0.9600 |
C16—H10B | 0.9700 | C30—H28A | 0.9600 |
C14—N15 | 1.258 (2) | C30—H28B | 0.9600 |
C14—C13 | 1.518 (2) | C30—H28C | 0.9600 |
C14—H11 | 0.9300 | C31—H29A | 0.9300 |
C13—C24 | 1.547 (3) | C31—H29B | 0.9300 |
C13—C12 | 1.554 (2) | C32—O3 | 1.449 (2) |
C13—C20 | 1.560 (2) | C32—C33 | 1.524 (3) |
C12—C11 | 1.525 (3) | C32—H30 | 0.9800 |
C12—H13A | 0.9700 | C33—O4 | 1.433 (2) |
C12—H13B | 0.9700 | C33—H31A | 0.9700 |
C11—C10 | 1.530 (2) | C33—H31B | 0.9700 |
C11—H14A | 0.9700 | C34—O4 | 1.432 (2) |
C11—H14B | 0.9700 | C34—O3 | 1.430 (2) |
C10—C9 | 1.526 (3) | C34—C36 | 1.514 (3) |
C10—H15A | 0.9700 | C34—C35 | 1.512 (3) |
C10—H15B | 0.9700 | C36—H33A | 0.9600 |
C9—N8 | 1.462 (2) | C36—H33B | 0.9600 |
C9—H16A | 0.9700 | C36—H33C | 0.9600 |
C9—H16B | 0.9700 | C35—H34A | 0.9600 |
C7—N8 | 1.259 (2) | C35—H34B | 0.9600 |
C7—H17 | 0.9300 | C35—H34C | 0.9600 |
C4—C5—C6 | 113.61 (15) | C23—C24—H24B | 109.0 |
C4—C5—H1A | 108.8 | C13—C24—H24B | 109.0 |
C6—C5—H1A | 108.8 | H24A—C24—H24B | 107.8 |
C4—C5—H1B | 108.8 | C22—C23—C24 | 110.26 (16) |
C6—C5—H1B | 108.8 | C22—C23—H19A | 109.6 |
H1A—C5—H1B | 107.7 | C24—C23—H19A | 109.6 |
C3—C4—C5 | 112.00 (16) | C22—C23—H19B | 109.6 |
C3—C4—H2A | 109.2 | C24—C23—H19B | 109.6 |
C5—C4—H2A | 109.2 | H19A—C23—H19B | 108.1 |
C3—C4—H2B | 109.2 | C31—C22—C23 | 122.99 (19) |
C5—C4—H2B | 109.2 | C31—C22—C21 | 123.65 (19) |
H2A—C4—H2B | 107.9 | C23—C22—C21 | 113.35 (16) |
C25—C3—C4 | 124.92 (19) | C22—C21—C20 | 112.61 (15) |
C25—C3—C2 | 121.83 (19) | C22—C21—H21A | 109.1 |
C4—C3—C2 | 113.25 (16) | C20—C21—H21A | 109.1 |
C3—C2—C1 | 111.92 (15) | C22—C21—H21B | 109.1 |
C3—C2—H4A | 109.2 | C20—C21—H21B | 109.1 |
C1—C2—H4A | 109.2 | H21A—C21—H21B | 107.8 |
C3—C2—H4B | 109.2 | C32—C20—C21 | 111.26 (15) |
C1—C2—H4B | 109.2 | C32—C20—C13 | 113.04 (14) |
H4A—C2—H4B | 107.9 | C21—C20—C13 | 110.28 (14) |
C26—C1—C2 | 110.97 (15) | C32—C20—H22 | 107.3 |
C26—C1—C6 | 113.77 (14) | C21—C20—H22 | 107.3 |
C2—C1—C6 | 109.36 (14) | C13—C20—H22 | 107.3 |
C26—C1—H5 | 107.5 | C3—C25—H23A | 120.0 |
C2—C1—H5 | 107.5 | C3—C25—H23B | 120.0 |
C6—C1—H5 | 107.5 | H23A—C25—H23B | 120.0 |
C7—C6—C5 | 110.47 (14) | O2—C26—C27 | 100.21 (15) |
C7—C6—C19 | 105.98 (14) | O2—C26—C1 | 109.10 (14) |
C5—C6—C19 | 108.03 (14) | C27—C26—C1 | 117.03 (15) |
C7—C6—C1 | 108.50 (14) | O2—C26—H24 | 110.0 |
C5—C6—C1 | 110.72 (14) | C27—C26—H24 | 110.0 |
C19—C6—C1 | 113.04 (14) | C1—C26—H24 | 110.0 |
C18—C19—C6 | 116.21 (14) | O1—C27—C26 | 102.98 (16) |
C18—C19—H7A | 108.2 | O1—C27—H25A | 111.2 |
C6—C19—H7A | 108.2 | C26—C27—H25A | 111.2 |
C18—C19—H7B | 108.2 | O1—C27—H25B | 111.2 |
C6—C19—H7B | 108.2 | C26—C27—H25B | 111.2 |
H7A—C19—H7B | 107.4 | H25A—C27—H25B | 109.1 |
C17—C18—C19 | 112.92 (15) | O2—C28—O1 | 106.40 (15) |
C17—C18—H8A | 109.0 | O2—C28—C29 | 107.56 (17) |
C19—C18—H8A | 109.0 | O1—C28—C29 | 110.7 (2) |
C17—C18—H8B | 109.0 | O2—C28—C30 | 110.74 (19) |
C19—C18—H8B | 109.0 | O1—C28—C30 | 107.89 (18) |
H8A—C18—H8B | 107.8 | C29—C28—C30 | 113.4 (2) |
C16—C17—C18 | 114.97 (15) | C28—C29—H27A | 109.5 |
C16—C17—H9A | 108.5 | C28—C29—H27B | 109.5 |
C18—C17—H9A | 108.5 | H27A—C29—H27B | 109.5 |
C16—C17—H9B | 108.5 | C28—C29—H27C | 109.5 |
C18—C17—H9B | 108.5 | H27A—C29—H27C | 109.5 |
H9A—C17—H9B | 107.5 | H27B—C29—H27C | 109.5 |
N15—C16—C17 | 110.75 (16) | C28—C30—H28A | 109.5 |
N15—C16—H10A | 109.5 | C28—C30—H28B | 109.5 |
C17—C16—H10A | 109.5 | H28A—C30—H28B | 109.5 |
N15—C16—H10B | 109.5 | C28—C30—H28C | 109.5 |
C17—C16—H10B | 109.5 | H28A—C30—H28C | 109.5 |
H10A—C16—H10B | 108.1 | H28B—C30—H28C | 109.5 |
N15—C14—C13 | 125.76 (16) | C22—C31—H29A | 120.0 |
N15—C14—H11 | 117.1 | C22—C31—H29B | 120.0 |
C13—C14—H11 | 117.1 | H29A—C31—H29B | 120.0 |
C14—C13—C24 | 107.37 (14) | O3—C32—C33 | 100.30 (15) |
C14—C13—C12 | 105.58 (14) | O3—C32—C20 | 109.32 (15) |
C24—C13—C12 | 107.31 (14) | C33—C32—C20 | 117.28 (15) |
C14—C13—C20 | 111.65 (14) | O3—C32—H30 | 109.8 |
C24—C13—C20 | 110.94 (14) | C33—C32—H30 | 109.8 |
C12—C13—C20 | 113.61 (14) | C20—C32—H30 | 109.8 |
C11—C12—C13 | 115.48 (15) | O4—C33—C32 | 102.53 (15) |
C11—C12—H13A | 108.4 | O4—C33—H31A | 111.3 |
C13—C12—H13A | 108.4 | C32—C33—H31A | 111.3 |
C11—C12—H13B | 108.4 | O4—C33—H31B | 111.3 |
C13—C12—H13B | 108.4 | C32—C33—H31B | 111.3 |
H13A—C12—H13B | 107.5 | H31A—C33—H31B | 109.2 |
C12—C11—C10 | 112.45 (15) | O4—C34—O3 | 106.23 (15) |
C12—C11—H14A | 109.1 | O4—C34—C36 | 110.57 (17) |
C10—C11—H14A | 109.1 | O3—C34—C36 | 108.03 (16) |
C12—C11—H14B | 109.1 | O4—C34—C35 | 108.48 (17) |
C10—C11—H14B | 109.1 | O3—C34—C35 | 110.33 (17) |
H14A—C11—H14B | 107.8 | C36—C34—C35 | 112.99 (19) |
C9—C10—C11 | 112.78 (16) | C34—C36—H33A | 109.5 |
C9—C10—H15A | 109.0 | C34—C36—H33B | 109.5 |
C11—C10—H15A | 109.0 | H33A—C36—H33B | 109.5 |
C9—C10—H15B | 109.0 | C34—C36—H33C | 109.5 |
C11—C10—H15B | 109.0 | H33A—C36—H33C | 109.5 |
H15A—C10—H15B | 107.8 | H33B—C36—H33C | 109.5 |
N8—C9—C10 | 110.21 (15) | C34—C35—H34A | 109.5 |
N8—C9—H16A | 109.6 | C34—C35—H34B | 109.5 |
C10—C9—H16A | 109.6 | H34A—C35—H34B | 109.5 |
N8—C9—H16B | 109.6 | C34—C35—H34C | 109.5 |
C10—C9—H16B | 109.6 | H34A—C35—H34C | 109.5 |
H16A—C9—H16B | 108.1 | H34B—C35—H34C | 109.5 |
N8—C7—C6 | 122.82 (16) | C14—N15—C16 | 117.19 (16) |
N8—C7—H17 | 118.6 | C7—N8—C9 | 118.06 (16) |
C6—C7—H17 | 118.6 | C27—O1—C28 | 107.81 (15) |
C23—C24—C13 | 113.04 (15) | C28—O2—C26 | 107.24 (14) |
C23—C24—H24A | 109.0 | C34—O3—C32 | 108.65 (14) |
C13—C24—H24A | 109.0 | C34—O4—C33 | 107.11 (14) |
Experimental details
Crystal data | |
Chemical formula | C34H54N2O4 |
Mr | 554.80 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 93 |
a, b, c (Å) | 6.8710 (1), 10.1701 (2), 11.7947 (2) |
α, β, γ (°) | 79.143 (1), 88.043 (1), 83.855 (1) |
V (Å3) | 804.71 (2) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.07 |
Crystal size (mm) | 0.36 × 0.19 × 0.1 |
Data collection | |
Diffractometer | Siemens SMART CCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 19146, 3824, 3555 |
Rint | 0.042 |
(sin θ/λ)max (Å−1) | 0.659 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.035, 0.091, 0.92 |
No. of reflections | 3824 |
No. of parameters | 365 |
No. of restraints | 3 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.28, −0.18 |
Computer programs: SMART (Siemens, 1995), SAINT (Siemens, 1995), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEPIII (Burnett & Johnson, 1996), ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2006), WinGX (Farrugia, 1999) and publCIF (Westrip, 2010).
Acknowledgements
We thank Tania Groutso for help with the data collection.
References
Allmann, R. (1974). Cryst. Struct. Commun. 3, 83–86. CAS Google Scholar
Asano, M., Inoue, M., Watanabe, K., Abe, H. & Katoh, T. (2006). J. Org. Chem. 71, 6942–6951. Web of Science CSD CrossRef PubMed CAS Google Scholar
Burnett, M. N. & Johnson, C. K. (1996). ORTEPIII. Report ORNL-6895. Oak Ridge National Laboratory, Tennessee, USA. Google Scholar
Dale, J. (1966). Angew. Chem. Int. Ed. 5, 1000–1021. CrossRef CAS Google Scholar
Danishefsky, S., Kitahara, T. & Schuda, P. F. (1990). Org. Synth. Coll. 7, 312–315. Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838. CrossRef CAS IUCr Journals Google Scholar
Gill, S., Murphy, M., Clausen, J., Richard, D., Quilliam, M., MacKinnon, S., LaBlanc, P., Mueller, R. & Pulido, O. (2003). Neurotoxicology, 24, 593–604. Web of Science CrossRef PubMed CAS Google Scholar
Guéret, S. M. & Brimble, M. A. (2010). Nat. Prod. Rep. In the press. Google Scholar
Hu, T. M., Burton, I. W., Cembella, A. D., Curtis, J. M., Quilliam, M. A., Walter, J. A. & Wright, J. L. C. (2001). J. Nat. Prod. 64, 308–312. Web of Science CrossRef PubMed CAS Google Scholar
Hu, T., Curtis, J. M., Oshima, Y., Quilliam, M. A., Walter, J. A., Watson-Wright, W. M. & Wright, J. L. C. (1995). J. Chem. Soc. Chem. Commun. pp. 2159–2161. CrossRef Web of Science Google Scholar
Macrae, C. F., Edgington, P. R., McCabe, P., Pidcock, E., Shields, G. P., Taylor, R., Towler, M. & van de Streek, J. (2006). J. Appl. Cryst. 39, 453–457. Web of Science CrossRef CAS IUCr Journals Google Scholar
Petrzilka, M. & Grayson, J. I. (1981). Synthesis, pp. 753–786. CrossRef Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Siemens (1995). SMART and SAINT . Siemens Analytical X-ray Instruments Inc., Madison, Wisconsin, USA. Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43. Submitted. Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title spiro-di-aldimine was obtained as part of a synthetic program directed towards the synthesis of the spiroimine unit of the spirolides AD. This family of marine toxins were isolated from the digestive glands of contaminated mussels, scallops and toxic plankton from the East coast of Nova Scotia in Canada and are considered as fast-acting toxins (Hu et al., 1995; Hu et al., 2001; Gill et al., 2003; Guéret & Brimble, 2010). The work demonstrates a new method to access an enantiopure spiro-di-aldimine and an enantiopure bicyclic ketimine in good overall yield. The synthesis of the spiroimine is a synthetic challenge and to date the synthesis of the 7,6-spiroimine moiety of the spirolides has not been achieved. By reaction of a chiral (R)-trisubstituted dienophile derived from (S)-glyceraldehyde with Danishefsky's diene (Asano et al., 2006; Danishefsky et al., 1990; Petrzilka & Grayson, 1981), the resultant Diels-Alder adducts were afforded as a mixture of 3 diastereoisomers in a 5:2:1 ratio. The undesired minor diastereoisomer was used to develop the synthetic route to the desired spiroaldimine. The Diels-Alder adduct was converted to the spiroimine precursor in several steps. Reaction of this advanced azido-aldehyde intermediate with triphenylphosphine surprisingly afforded the stable title dimer instead of the expected 7,6-bicyclic aldimine. The stability of the title dimer is unexpected compared to the known instability of aldimines in general. Given that the stereochemistry at C26 and C32 is known to be R (based on using enantiopure (S)-glyceraldehyde as the starting material), the absolute configuration at C1, C6, C13 and C20 has therefore also been assigned as R. The assignment of configuration of the trisubstituted dienophile and the title di-aldimine differs from the starting (S)-glyceraldehyde due to a change in the priority order of substituents.
The molecular structure, Fig. 1, indicates that the acetal unit and the imine part adopt an axial position in both cyclohexane rings. The 14-membered ring contains two aldimine bonds(C14—N15 1.258 (2),C7—N8 1.259 (2)). It adopts a similar conformation to that proposed for trans-trans cyclotetradeca-1,8-dienes (Dale, 1966) except for an alternate conformation for C17, C18 and C19. A 14-membered tetra-azacyclotetradeca-1,8-diene which has R and S centres shows similar conformational characteristics (Allmann, 1974). The diazaspirocyclotetradecan-7,14-ene molecules assemble in the crystal in linear arrays. Each ring is offset with the six membered rings from a neighbouring molecule aligned over the ring centre, Fig. 2.