organic compounds
(4-Chlorophenyl)methanaminium chloride hemihydrate
aLaboratoire de Chimie des Matériaux, Faculté des Sciences de Bizerte, 7021 Zarzouna Bizerte, Tunisia, and bPetrochemical Research Chair, College of Science, King Saud University, Riyadh, Saudi Arabia
*Correspondence e-mail: wajda_sta@yahoo.fr
In the title hydrated salt, C7H9ClN+·Cl−·0.5H2O, the water O atom lies on a crystallographic twofold axis. In the crystal, the monoprotonated 4-chlorobenzylammonium cation forms N—H⋯Cl and N—H⋯O hydrogen bonds and the water molecule forms O—H⋯Cl hydrogen bonds, generating layers lying parallel to the bc plane.
Related literature
For the properties of benzylamines, see: Markwardt et al. (2005). For a related structure, see: Dhaouadi et al. (2008).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994); cell CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536810021100/hb5481sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810021100/hb5481Isup2.hkl
An ethanolic solution of 4-chlorobenzylamine (10 mmol, in 10 ml) was added, with stirring, to 20 ml of an aqueous HCl solution (0.5M) at room temperature. Colourless blocks of (I) were obtained on slow evaporation of the solvent.
All H atoms were positioned geometrically and treated as riding on their parent atoms, [N–H = 0.89, C–H =0.96 Å (CH3 ) with with Uiso(H) = 1.5Ueq and C–H =0.96 Å (Ar–H), with Uiso(H) = 1.5Ueq], but those attached to oxygen atom are located in a difference map
Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994); cell
CAD-4 EXPRESS (Enraf–Nonius, 1994); data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. View of (I) with displacement ellipsoids for non-H atoms are drawn at the 30% probability level. | |
Fig. 2. A view of the packing of (I) along the b axis. |
C7H9ClN+·Cl−·0.5H2O | F(000) = 776 |
Mr = 187.06 | Dx = 1.443 Mg m−3 |
Monoclinic, C2/c | Ag Kα radiation, λ = 0.56085 Å |
Hall symbol: -C 2yc | Cell parameters from 25 reflections |
a = 30.462 (2) Å | θ = 9–11° |
b = 4.890 (3) Å | µ = 0.35 mm−1 |
c = 11.738 (2) Å | T = 293 K |
β = 99.97 (3)° | Block, colourless |
V = 1722.1 (11) Å3 | 0.30 × 0.25 × 0.20 mm |
Z = 8 |
Enraf–Nonius TurboCAD-4 diffractometer | Rint = 0.031 |
Radiation source: fine-focus sealed tube | θmax = 28.0°, θmin = 2.3° |
Graphite monochromator | h = −50→50 |
non–profiled ω scans | k = 0→8 |
5908 measured reflections | l = −5→19 |
4207 independent reflections | 2 standard reflections every 120 min |
2217 reflections with I > 2σ(I) | intensity decay: 5% |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.048 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.130 | w = 1/[σ2(Fo2) + (0.0585P)2 + 0.2911P] where P = (Fo2 + 2Fc2)/3 |
S = 1.00 | (Δ/σ)max = 0.001 |
4207 reflections | Δρmax = 0.34 e Å−3 |
101 parameters | Δρmin = −0.32 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0080 (12) |
C7H9ClN+·Cl−·0.5H2O | V = 1722.1 (11) Å3 |
Mr = 187.06 | Z = 8 |
Monoclinic, C2/c | Ag Kα radiation, λ = 0.56085 Å |
a = 30.462 (2) Å | µ = 0.35 mm−1 |
b = 4.890 (3) Å | T = 293 K |
c = 11.738 (2) Å | 0.30 × 0.25 × 0.20 mm |
β = 99.97 (3)° |
Enraf–Nonius TurboCAD-4 diffractometer | Rint = 0.031 |
5908 measured reflections | 2 standard reflections every 120 min |
4207 independent reflections | intensity decay: 5% |
2217 reflections with I > 2σ(I) |
R[F2 > 2σ(F2)] = 0.048 | 0 restraints |
wR(F2) = 0.130 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.00 | Δρmax = 0.34 e Å−3 |
4207 reflections | Δρmin = −0.32 e Å−3 |
101 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.049348 (13) | 0.63727 (9) | 0.11132 (4) | 0.04257 (13) | |
O | 0.0000 | 0.2285 (4) | 0.2500 | 0.0494 (5) | |
H1 | 0.0151 (8) | 0.323 (5) | 0.210 (2) | 0.089 (9)* | |
C1 | 0.12851 (4) | 0.0280 (3) | 0.40289 (14) | 0.0313 (3) | |
C2 | 0.12629 (5) | 0.1317 (3) | 0.29253 (14) | 0.0364 (3) | |
H2 | 0.1048 | 0.0661 | 0.2328 | 0.044* | |
C3 | 0.15582 (5) | 0.3328 (3) | 0.26977 (14) | 0.0371 (3) | |
H3 | 0.1538 | 0.4046 | 0.1957 | 0.045* | |
C4 | 0.18814 (4) | 0.4244 (3) | 0.35851 (14) | 0.0329 (3) | |
C5 | 0.19059 (5) | 0.3278 (4) | 0.46938 (15) | 0.0386 (4) | |
H5 | 0.2121 | 0.3947 | 0.5289 | 0.046* | |
C6 | 0.16065 (5) | 0.1293 (4) | 0.49129 (14) | 0.0380 (3) | |
H6 | 0.1621 | 0.0631 | 0.5661 | 0.046* | |
C7 | 0.09748 (5) | −0.1977 (3) | 0.42512 (18) | 0.0399 (4) | |
H7A | 0.0966 | −0.3362 | 0.3656 | 0.048* | |
H7B | 0.1090 | −0.2824 | 0.4990 | 0.048* | |
Cl2 | 0.225682 (14) | 0.66901 (9) | 0.32754 (5) | 0.04948 (15) | |
N | 0.05166 (4) | −0.0999 (3) | 0.42641 (13) | 0.0404 (3) | |
H0A | 0.0347 | −0.2400 | 0.4401 | 0.061* | |
H0B | 0.0406 | −0.0261 | 0.3582 | 0.061* | |
H0C | 0.0521 | 0.0251 | 0.4817 | 0.061* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0390 (2) | 0.0365 (2) | 0.0527 (3) | 0.00140 (16) | 0.00925 (17) | 0.00195 (19) |
O | 0.0523 (11) | 0.0428 (10) | 0.0574 (12) | 0.000 | 0.0215 (9) | 0.000 |
C1 | 0.0289 (6) | 0.0260 (6) | 0.0403 (8) | 0.0011 (5) | 0.0097 (6) | −0.0002 (6) |
C2 | 0.0372 (7) | 0.0376 (8) | 0.0333 (8) | −0.0070 (6) | 0.0033 (6) | −0.0044 (7) |
C3 | 0.0441 (8) | 0.0367 (8) | 0.0314 (8) | −0.0060 (7) | 0.0086 (6) | 0.0008 (7) |
C4 | 0.0281 (6) | 0.0281 (6) | 0.0444 (9) | −0.0017 (5) | 0.0117 (6) | −0.0042 (6) |
C5 | 0.0318 (7) | 0.0436 (9) | 0.0388 (9) | −0.0035 (6) | 0.0011 (6) | −0.0064 (7) |
C6 | 0.0388 (7) | 0.0407 (8) | 0.0342 (8) | 0.0015 (7) | 0.0057 (6) | 0.0049 (7) |
C7 | 0.0384 (7) | 0.0263 (7) | 0.0577 (11) | 0.0010 (6) | 0.0153 (7) | 0.0043 (7) |
Cl2 | 0.0432 (2) | 0.0391 (2) | 0.0709 (3) | −0.01276 (17) | 0.0229 (2) | −0.0055 (2) |
N | 0.0339 (6) | 0.0355 (7) | 0.0529 (9) | −0.0069 (5) | 0.0101 (6) | 0.0005 (6) |
O—H1 | 0.84 (2) | C5—C6 | 1.386 (2) |
C1—C2 | 1.382 (2) | C5—H5 | 0.9300 |
C1—C6 | 1.389 (2) | C6—H6 | 0.9300 |
C1—C7 | 1.505 (2) | C7—N | 1.4779 (19) |
C2—C3 | 1.389 (2) | C7—H7A | 0.9700 |
C2—H2 | 0.9300 | C7—H7B | 0.9700 |
C3—C4 | 1.379 (2) | N—H0A | 0.8900 |
C3—H3 | 0.9300 | N—H0B | 0.8900 |
C4—C5 | 1.374 (2) | N—H0C | 0.8900 |
C4—Cl2 | 1.7361 (15) | ||
C2—C1—C6 | 118.89 (14) | C5—C6—C1 | 120.84 (15) |
C2—C1—C7 | 120.10 (15) | C5—C6—H6 | 119.6 |
C6—C1—C7 | 120.98 (15) | C1—C6—H6 | 119.6 |
C1—C2—C3 | 120.78 (15) | N—C7—C1 | 112.77 (13) |
C1—C2—H2 | 119.6 | N—C7—H7A | 109.0 |
C3—C2—H2 | 119.6 | C1—C7—H7A | 109.0 |
C4—C3—C2 | 119.10 (15) | N—C7—H7B | 109.0 |
C4—C3—H3 | 120.5 | C1—C7—H7B | 109.0 |
C2—C3—H3 | 120.5 | H7A—C7—H7B | 107.8 |
C5—C4—C3 | 121.21 (14) | C7—N—H0A | 109.5 |
C5—C4—Cl2 | 120.36 (12) | C7—N—H0B | 109.5 |
C3—C4—Cl2 | 118.42 (13) | H0A—N—H0B | 109.5 |
C4—C5—C6 | 119.14 (14) | C7—N—H0C | 109.5 |
C4—C5—H5 | 120.4 | H0A—N—H0C | 109.5 |
C6—C5—H5 | 120.4 | H0B—N—H0C | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
N—H0A···Cl1i | 0.89 | 2.60 | 3.2930 (19) | 136 |
N—H0A···Cl1ii | 0.89 | 2.78 | 3.417 (2) | 130 |
N—H0B···O | 0.89 | 2.04 | 2.866 (2) | 155 |
N—H0C···Cl1iii | 0.89 | 2.26 | 3.144 (2) | 175 |
O—H1···Cl1 | 0.85 (3) | 2.28 (3) | 3.1230 (18) | 171 (3) |
Symmetry codes: (i) −x, y−1, −z+1/2; (ii) x, −y, z+1/2; (iii) x, −y+1, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C7H9ClN+·Cl−·0.5H2O |
Mr | 187.06 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 293 |
a, b, c (Å) | 30.462 (2), 4.890 (3), 11.738 (2) |
β (°) | 99.97 (3) |
V (Å3) | 1722.1 (11) |
Z | 8 |
Radiation type | Ag Kα, λ = 0.56085 Å |
µ (mm−1) | 0.35 |
Crystal size (mm) | 0.30 × 0.25 × 0.20 |
Data collection | |
Diffractometer | Enraf–Nonius TurboCAD-4 diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5908, 4207, 2217 |
Rint | 0.031 |
(sin θ/λ)max (Å−1) | 0.836 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.048, 0.130, 1.00 |
No. of reflections | 4207 |
No. of parameters | 101 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.34, −0.32 |
Computer programs: CAD-4 EXPRESS (Enraf–Nonius, 1994), XCAD4 (Harms & Wocadlo, 1995), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
N—H0A···Cl1i | 0.89 | 2.60 | 3.2930 (19) | 136 |
N—H0A···Cl1ii | 0.89 | 2.78 | 3.417 (2) | 130 |
N—H0B···O | 0.89 | 2.04 | 2.866 (2) | 155 |
N—H0C···Cl1iii | 0.89 | 2.26 | 3.144 (2) | 175 |
O—H1···Cl1 | 0.85 (3) | 2.28 (3) | 3.1230 (18) | 171 (3) |
Symmetry codes: (i) −x, y−1, −z+1/2; (ii) x, −y, z+1/2; (iii) x, −y+1, z+1/2. |
References
Dhaouadi, H., Marouani, H., Rzaigui, M. & Madani, A. (2008). Mater. Res. Bull. 43, 3234–3244. Web of Science CSD CrossRef CAS Google Scholar
Enraf–Nonius (1994). CAD-4 EXPRESS. Enraf–Nonius, Delft, The Netherlands. Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838. CrossRef CAS IUCr Journals Google Scholar
Harms, K. & Wocadlo, S. (1995). XCAD4. University of Marburg, Germany. Google Scholar
Markwardt, F., Landmann, H. & Walsmann, P. (2005). Eur. J. Biochem. 6, 502–506. CrossRef Web of Science Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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Derivatives of benzylamine were found to be competitive inhibitors of the proteolytic enzymes trypsin, plasmin, and thrombin. So, the 4-chlorobenzylamine is a strong thrombin inhibitor but only of low effectiveness against trypsin and plasmin for the hydrolysis of N-α-benzoyl catalyzed by these three enzymes. Relations between the chemical structure and the activity against trypsin, plasmin and thrombin were deduced by comparing the inhibitor constants (Markwardt, F. et al., 2005). In this work, we report the crystal structure of the title compound (I). As shown in (Fig.1), the asymmetric unit of (I) is built up from one 4-chlorobenzylammonium cation, one chloride anion and one water molecule. The Cl- anions, water molecules and R—NH3+ groups are lineked via O—H···Cl, N—H···O and N—H···Cl hydrogen bonds and ionic interactions, so as to built inorganic layers spreading around the (b,c) planes. The 4-chlorobenzylammonium cations are anchored onto the successive inorganic layers via hydrogen bonds and electrostatic interactions, to composite their negative charges.
The examination of the organic cation shows that the values of N—C, C—C, C—Cl distances and N—C—C, C—C—C, C—C—Cl angles range from 1.376 (3) to 1.736 (3) Å and 115.72 (19) to 122.80 (19)°, respectively. These values show no significant difference from those obtained in other organic materials associated with the same organic groups (Dhaouadi, H. et al., 2008).
In this structure, the water molecules play a very important role in the cohesion of the various groups. It participates with the organic cations and chloride anions in the H-bonding scheme of N—H···O and O—H···Cl interactions in the crystal structure. The four hydrogen bonds are relatively weak, and their donor acceptor distances vary from 2.866 (2) to 3.417 (3) Å. Thus, these different interactions (hydrogen bonds, Van der Waals, and electrostatic) form a stable three-dimensional network.