organic compounds
Methyl 2,6-bis[(5-bromo-4,6-dimethoxypyrimidin-2-yl)oxy]benzoate
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bDepartment of Chemistry, Manipal Institute of Technology, Manipal University, Manipal 576 104, India, cOrganic Chemistry Division, Department of Chemistry, National Institute of Technology-Karnataka, Surathkal, Mangalore 575 025, India, and dDepartment of Printing, Manipal Institute of Technology, Manipal University, Manipal 576 104, India
*Correspondence e-mail: hkfun@usm.my
In the title compound, C20H18Br2N4O8, the interplanar angle of the pyrimidine rings is 75.1 (2)°. The central benzene ring is inclined at interplanar angles of 66.5 (2) and 71.9 (2)° with respect to the two pyrimidine rings. In the adjacent molecules are connected into two-molecule-thick arrays parallel to the bc plane via short Br⋯Br [3.5328 (12) Å] and Br⋯O [3.206 (3) and 3.301 (4) Å] interactions. A weak intermolecular π–π aromatic stacking interaction [centroid–centroid distance = 3.526 (3) Å] is also observed.
Related literature
For general background to and applications of the title compound, see: Koichiro et al. (1988); He et al. (2007); Li et al. (2006); Gerorge (1983). For closely related structures, see: Fun et al. (2010); Li & Luo (2006).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536810024724/hb5519sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810024724/hb5519Isup2.hkl
To a stirred solution of methyl-2,6-dihydroxybenzoate (0.50 g, 0.0026 mol) in acetonitrile (10 ml) was added potassium carbonate (1.00 g, 0.0070 mol) and 5-bromo-4,6-dimethoxy-2-(methylsulfonyl)pyrimidine (1.78 g, 0.0050 mol). The reaction mixture was heated to reflux for 4 h.
showed completion of the reaction. The reaction mixture was filtered and filtrate was concentrated. The residue was recrystallized using dichloromethane to obtain brown blocks of (I) (Yield: 67 %, M.p. 440–443 K).All H atoms were placed in their calculated positions, with C—H = 0.93 – 0.96 Å, and refined using a riding model with Uiso = 1.2 or 1.5 Ueq(C). The rotating group model was used for the methyl groups.
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C20H18Br2N4O8 | F(000) = 2400 |
Mr = 602.20 | Dx = 1.698 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 2909 reflections |
a = 29.972 (5) Å | θ = 2.7–25.5° |
b = 8.1392 (12) Å | µ = 3.49 mm−1 |
c = 23.061 (3) Å | T = 293 K |
β = 123.120 (3)° | Block, brown |
V = 4711.8 (12) Å3 | 0.20 × 0.18 × 0.14 mm |
Z = 8 |
Bruker APEXII DUO CCD diffractometer | 8438 independent reflections |
Radiation source: fine-focus sealed tube | 4458 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.066 |
ϕ and ω scans | θmax = 32.5°, θmin = 2.7° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −45→45 |
Tmin = 0.549, Tmax = 0.640 | k = −12→12 |
25204 measured reflections | l = −34→34 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.064 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.254 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.1449P)2] where P = (Fo2 + 2Fc2)/3 |
8438 reflections | (Δ/σ)max = 0.001 |
306 parameters | Δρmax = 1.32 e Å−3 |
0 restraints | Δρmin = −1.56 e Å−3 |
C20H18Br2N4O8 | V = 4711.8 (12) Å3 |
Mr = 602.20 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 29.972 (5) Å | µ = 3.49 mm−1 |
b = 8.1392 (12) Å | T = 293 K |
c = 23.061 (3) Å | 0.20 × 0.18 × 0.14 mm |
β = 123.120 (3)° |
Bruker APEXII DUO CCD diffractometer | 8438 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 4458 reflections with I > 2σ(I) |
Tmin = 0.549, Tmax = 0.640 | Rint = 0.066 |
25204 measured reflections |
R[F2 > 2σ(F2)] = 0.064 | 0 restraints |
wR(F2) = 0.254 | H-atom parameters constrained |
S = 1.02 | Δρmax = 1.32 e Å−3 |
8438 reflections | Δρmin = −1.56 e Å−3 |
306 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | 0.30639 (2) | 0.57188 (7) | 0.09822 (4) | 0.0594 (2) | |
Br2 | 0.08330 (2) | 0.91910 (6) | 0.40182 (3) | 0.04252 (17) | |
O1 | 0.11548 (12) | 0.9112 (3) | 0.04513 (18) | 0.0337 (7) | |
O2 | 0.05069 (15) | 0.5753 (3) | 0.15875 (19) | 0.0372 (7) | |
O3 | 0.28301 (15) | 0.9322 (4) | 0.0904 (3) | 0.0563 (11) | |
O4 | 0.20456 (14) | 0.4280 (4) | 0.0769 (2) | 0.0459 (9) | |
O5 | 0.16295 (15) | 0.8884 (5) | 0.1855 (2) | 0.0568 (10) | |
O6 | 0.16019 (17) | 0.6258 (6) | 0.2086 (3) | 0.0729 (14) | |
O7 | 0.07542 (16) | 0.5580 (4) | 0.3707 (2) | 0.0422 (8) | |
O8 | 0.06803 (15) | 1.0608 (4) | 0.27029 (19) | 0.0409 (8) | |
N1 | 0.19889 (16) | 0.9262 (4) | 0.0691 (2) | 0.0377 (9) | |
N2 | 0.15798 (13) | 0.6659 (4) | 0.0595 (2) | 0.0324 (8) | |
N3 | 0.06285 (16) | 0.5635 (4) | 0.2625 (2) | 0.0334 (8) | |
N4 | 0.05992 (14) | 0.8206 (4) | 0.21251 (19) | 0.0320 (7) | |
C1 | 0.24118 (18) | 0.8474 (6) | 0.0787 (3) | 0.0378 (10) | |
C2 | 0.24567 (18) | 0.6781 (6) | 0.0836 (3) | 0.0389 (10) | |
C3 | 0.20209 (17) | 0.5919 (5) | 0.0728 (3) | 0.0352 (9) | |
C4 | 0.15971 (16) | 0.8269 (5) | 0.0587 (2) | 0.0311 (9) | |
C5 | 0.07637 (16) | 0.8238 (5) | 0.0466 (2) | 0.0314 (9) | |
C6 | 0.02573 (18) | 0.8241 (6) | −0.0133 (3) | 0.0410 (11) | |
H6A | 0.0198 | 0.8777 | −0.0526 | 0.049* | |
C7 | −0.01538 (19) | 0.7465 (6) | −0.0153 (3) | 0.0472 (12) | |
H7A | −0.0494 | 0.7494 | −0.0554 | 0.057* | |
C8 | −0.00662 (19) | 0.6642 (6) | 0.0420 (3) | 0.0410 (11) | |
H8A | −0.0343 | 0.6082 | 0.0405 | 0.049* | |
C9 | 0.04382 (18) | 0.6656 (5) | 0.1021 (2) | 0.0337 (9) | |
C10 | 0.08581 (17) | 0.7468 (5) | 0.1067 (2) | 0.0314 (8) | |
C11 | 0.05805 (17) | 0.6583 (5) | 0.2136 (2) | 0.0310 (8) | |
C12 | 0.06957 (17) | 0.6433 (5) | 0.3175 (2) | 0.0315 (8) | |
C13 | 0.07150 (16) | 0.8121 (5) | 0.3220 (2) | 0.0318 (9) | |
C14 | 0.06590 (16) | 0.8963 (5) | 0.2677 (2) | 0.0300 (8) | |
C15 | 0.2797 (3) | 1.1092 (7) | 0.0878 (5) | 0.068 (2) | |
H15A | 0.3105 | 1.1541 | 0.0909 | 0.101* | |
H15B | 0.2780 | 1.1486 | 0.1259 | 0.101* | |
H15C | 0.2482 | 1.1428 | 0.0450 | 0.101* | |
C16 | 0.1604 (2) | 0.3438 (6) | 0.0691 (4) | 0.0586 (17) | |
H16A | 0.1653 | 0.2277 | 0.0675 | 0.088* | |
H16B | 0.1285 | 0.3779 | 0.0269 | 0.088* | |
H16C | 0.1575 | 0.3686 | 0.1076 | 0.088* | |
C17 | 0.1402 (2) | 0.7456 (6) | 0.1719 (3) | 0.0437 (11) | |
C18 | 0.2141 (3) | 0.9103 (8) | 0.2484 (4) | 0.0720 (14) | |
H18A | 0.2214 | 1.0256 | 0.2574 | 0.108* | |
H18B | 0.2409 | 0.8602 | 0.2438 | 0.108* | |
H18C | 0.2141 | 0.8600 | 0.2860 | 0.108* | |
C19 | 0.0734 (3) | 0.3785 (6) | 0.3658 (4) | 0.0590 (16) | |
H19A | 0.0695 | 0.3336 | 0.4013 | 0.089* | |
H19B | 0.1057 | 0.3382 | 0.3717 | 0.089* | |
H19C | 0.0436 | 0.3459 | 0.3212 | 0.089* | |
C20 | 0.0691 (3) | 1.1479 (9) | 0.2166 (4) | 0.0720 (14) | |
H20A | 0.0732 | 1.2634 | 0.2267 | 0.108* | |
H20B | 0.0364 | 1.1289 | 0.1729 | 0.108* | |
H20C | 0.0985 | 1.1093 | 0.2145 | 0.108* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.0381 (3) | 0.0527 (3) | 0.0907 (5) | 0.0122 (2) | 0.0374 (3) | 0.0068 (3) |
Br2 | 0.0570 (3) | 0.0430 (3) | 0.0376 (3) | −0.0108 (2) | 0.0324 (2) | −0.0123 (2) |
O1 | 0.0330 (14) | 0.0321 (15) | 0.0452 (19) | 0.0082 (11) | 0.0272 (14) | 0.0116 (13) |
O2 | 0.058 (2) | 0.0298 (15) | 0.0372 (18) | −0.0026 (13) | 0.0347 (17) | −0.0028 (13) |
O3 | 0.0390 (18) | 0.0438 (19) | 0.096 (3) | −0.0040 (14) | 0.043 (2) | −0.0001 (19) |
O4 | 0.0391 (17) | 0.0321 (16) | 0.068 (3) | 0.0026 (12) | 0.0305 (18) | −0.0035 (16) |
O5 | 0.048 (2) | 0.067 (2) | 0.040 (2) | −0.0182 (17) | 0.0144 (18) | 0.0008 (19) |
O6 | 0.057 (2) | 0.075 (3) | 0.057 (3) | 0.013 (2) | 0.012 (2) | 0.024 (2) |
O7 | 0.062 (2) | 0.0343 (17) | 0.040 (2) | −0.0001 (14) | 0.0346 (18) | 0.0038 (14) |
O8 | 0.056 (2) | 0.0282 (15) | 0.038 (2) | 0.0019 (13) | 0.0257 (17) | −0.0022 (14) |
N1 | 0.0375 (19) | 0.0338 (19) | 0.048 (2) | 0.0027 (14) | 0.0270 (19) | 0.0063 (17) |
N2 | 0.0304 (16) | 0.0305 (17) | 0.036 (2) | 0.0020 (13) | 0.0180 (15) | −0.0021 (15) |
N3 | 0.0444 (19) | 0.0308 (18) | 0.035 (2) | −0.0017 (14) | 0.0279 (18) | −0.0015 (15) |
N4 | 0.0391 (18) | 0.0312 (17) | 0.0285 (19) | 0.0000 (14) | 0.0202 (16) | 0.0004 (15) |
C1 | 0.035 (2) | 0.038 (2) | 0.042 (3) | 0.0017 (17) | 0.022 (2) | 0.000 (2) |
C2 | 0.035 (2) | 0.037 (2) | 0.046 (3) | 0.0058 (17) | 0.023 (2) | −0.001 (2) |
C3 | 0.034 (2) | 0.031 (2) | 0.040 (3) | 0.0046 (15) | 0.0196 (19) | 0.0021 (18) |
C4 | 0.0302 (18) | 0.037 (2) | 0.028 (2) | 0.0081 (15) | 0.0168 (17) | 0.0035 (18) |
C5 | 0.0341 (19) | 0.035 (2) | 0.032 (2) | 0.0063 (16) | 0.0225 (18) | 0.0031 (18) |
C6 | 0.037 (2) | 0.052 (3) | 0.037 (3) | 0.0065 (19) | 0.022 (2) | 0.011 (2) |
C7 | 0.033 (2) | 0.060 (3) | 0.040 (3) | 0.002 (2) | 0.015 (2) | 0.000 (2) |
C8 | 0.038 (2) | 0.049 (3) | 0.038 (3) | −0.0044 (19) | 0.022 (2) | −0.006 (2) |
C9 | 0.044 (2) | 0.031 (2) | 0.036 (2) | 0.0029 (16) | 0.028 (2) | −0.0070 (18) |
C10 | 0.038 (2) | 0.031 (2) | 0.029 (2) | 0.0024 (16) | 0.0204 (18) | −0.0012 (17) |
C11 | 0.039 (2) | 0.0274 (19) | 0.033 (2) | −0.0021 (15) | 0.0233 (19) | −0.0040 (17) |
C12 | 0.0352 (19) | 0.035 (2) | 0.030 (2) | −0.0022 (16) | 0.0214 (18) | 0.0028 (18) |
C13 | 0.0311 (18) | 0.037 (2) | 0.032 (2) | −0.0015 (15) | 0.0199 (18) | −0.0054 (18) |
C14 | 0.0306 (18) | 0.0305 (19) | 0.030 (2) | −0.0004 (14) | 0.0169 (17) | −0.0062 (17) |
C15 | 0.065 (4) | 0.039 (3) | 0.109 (6) | −0.011 (2) | 0.055 (4) | −0.006 (3) |
C16 | 0.045 (3) | 0.037 (3) | 0.093 (5) | −0.001 (2) | 0.037 (3) | −0.002 (3) |
C17 | 0.042 (2) | 0.055 (3) | 0.033 (3) | 0.000 (2) | 0.020 (2) | −0.004 (2) |
C18 | 0.073 (3) | 0.073 (3) | 0.053 (3) | −0.018 (2) | 0.023 (2) | 0.003 (2) |
C19 | 0.104 (5) | 0.032 (2) | 0.054 (4) | 0.000 (3) | 0.052 (4) | 0.006 (2) |
C20 | 0.073 (3) | 0.073 (3) | 0.053 (3) | −0.018 (2) | 0.023 (2) | 0.003 (2) |
Br1—C2 | 1.872 (4) | C5—C6 | 1.386 (7) |
Br2—C13 | 1.887 (4) | C5—C10 | 1.401 (6) |
O1—C4 | 1.368 (5) | C6—C7 | 1.363 (7) |
O1—C5 | 1.388 (5) | C6—H6A | 0.9300 |
O2—C11 | 1.342 (5) | C7—C8 | 1.373 (8) |
O2—C9 | 1.412 (6) | C7—H7A | 0.9300 |
O3—C1 | 1.324 (6) | C8—C9 | 1.384 (7) |
O3—C15 | 1.443 (6) | C8—H8A | 0.9300 |
O4—C3 | 1.337 (5) | C9—C10 | 1.374 (6) |
O4—C16 | 1.411 (6) | C10—C17 | 1.496 (7) |
O5—C17 | 1.297 (6) | C12—C13 | 1.376 (6) |
O5—C18 | 1.433 (8) | C13—C14 | 1.356 (6) |
O6—C17 | 1.213 (7) | C15—H15A | 0.9600 |
O7—C12 | 1.336 (5) | C15—H15B | 0.9600 |
O7—C19 | 1.464 (6) | C15—H15C | 0.9600 |
O8—C14 | 1.341 (5) | C16—H16A | 0.9600 |
O8—C20 | 1.442 (8) | C16—H16B | 0.9600 |
N1—C1 | 1.327 (6) | C16—H16C | 0.9600 |
N1—C4 | 1.335 (6) | C18—H18A | 0.9600 |
N2—C4 | 1.312 (6) | C18—H18B | 0.9600 |
N2—C3 | 1.328 (5) | C18—H18C | 0.9600 |
N3—C11 | 1.308 (6) | C19—H19A | 0.9600 |
N3—C12 | 1.339 (6) | C19—H19B | 0.9600 |
N4—C11 | 1.323 (5) | C19—H19C | 0.9600 |
N4—C14 | 1.334 (6) | C20—H20A | 0.9600 |
C1—C2 | 1.383 (6) | C20—H20B | 0.9600 |
C2—C3 | 1.380 (6) | C20—H20C | 0.9600 |
C4—O1—C5 | 117.6 (3) | N4—C11—O2 | 118.2 (4) |
C11—O2—C9 | 118.4 (3) | O7—C12—N3 | 119.6 (4) |
C1—O3—C15 | 118.4 (4) | O7—C12—C13 | 118.1 (4) |
C3—O4—C16 | 117.6 (4) | N3—C12—C13 | 122.3 (4) |
C17—O5—C18 | 119.2 (5) | C14—C13—C12 | 117.1 (4) |
C12—O7—C19 | 118.0 (4) | C14—C13—Br2 | 122.1 (3) |
C14—O8—C20 | 118.4 (5) | C12—C13—Br2 | 120.8 (4) |
C1—N1—C4 | 113.8 (4) | N4—C14—O8 | 118.8 (4) |
C4—N2—C3 | 114.4 (4) | N4—C14—C13 | 122.2 (4) |
C11—N3—C12 | 114.7 (4) | O8—C14—C13 | 119.0 (4) |
C11—N4—C14 | 115.3 (4) | O3—C15—H15A | 109.5 |
O3—C1—N1 | 119.6 (4) | O3—C15—H15B | 109.5 |
O3—C1—C2 | 117.7 (4) | H15A—C15—H15B | 109.5 |
N1—C1—C2 | 122.4 (4) | O3—C15—H15C | 109.5 |
C3—C2—C1 | 116.9 (4) | H15A—C15—H15C | 109.5 |
C3—C2—Br1 | 121.9 (3) | H15B—C15—H15C | 109.5 |
C1—C2—Br1 | 121.1 (3) | O4—C16—H16A | 109.5 |
N2—C3—O4 | 118.6 (4) | O4—C16—H16B | 109.5 |
N2—C3—C2 | 122.4 (4) | H16A—C16—H16B | 109.5 |
O4—C3—C2 | 119.0 (4) | O4—C16—H16C | 109.5 |
N2—C4—N1 | 129.8 (4) | H16A—C16—H16C | 109.5 |
N2—C4—O1 | 117.6 (4) | H16B—C16—H16C | 109.5 |
N1—C4—O1 | 112.6 (4) | O6—C17—O5 | 123.8 (5) |
C6—C5—O1 | 117.0 (4) | O6—C17—C10 | 124.0 (5) |
C6—C5—C10 | 120.5 (4) | O5—C17—C10 | 112.2 (4) |
O1—C5—C10 | 122.5 (4) | O5—C18—H18A | 109.5 |
C7—C6—C5 | 120.6 (5) | O5—C18—H18B | 109.5 |
C7—C6—H6A | 119.7 | H18A—C18—H18B | 109.5 |
C5—C6—H6A | 119.7 | O5—C18—H18C | 109.5 |
C6—C7—C8 | 120.0 (5) | H18A—C18—H18C | 109.5 |
C6—C7—H7A | 120.0 | H18B—C18—H18C | 109.5 |
C8—C7—H7A | 120.0 | O7—C19—H19A | 109.5 |
C7—C8—C9 | 119.3 (4) | O7—C19—H19B | 109.5 |
C7—C8—H8A | 120.3 | H19A—C19—H19B | 109.5 |
C9—C8—H8A | 120.3 | O7—C19—H19C | 109.5 |
C10—C9—C8 | 122.3 (4) | H19A—C19—H19C | 109.5 |
C10—C9—O2 | 121.0 (4) | H19B—C19—H19C | 109.5 |
C8—C9—O2 | 116.7 (4) | O8—C20—H20A | 109.5 |
C9—C10—C5 | 117.2 (4) | O8—C20—H20B | 109.5 |
C9—C10—C17 | 121.5 (4) | H20A—C20—H20B | 109.5 |
C5—C10—C17 | 121.2 (4) | O8—C20—H20C | 109.5 |
N3—C11—N4 | 128.3 (4) | H20A—C20—H20C | 109.5 |
N3—C11—O2 | 113.5 (3) | H20B—C20—H20C | 109.5 |
C15—O3—C1—N1 | −4.0 (8) | C8—C9—C10—C17 | −179.4 (4) |
C15—O3—C1—C2 | −177.8 (6) | O2—C9—C10—C17 | −1.0 (6) |
C4—N1—C1—O3 | −179.2 (5) | C6—C5—C10—C9 | 3.4 (6) |
C4—N1—C1—C2 | −5.6 (7) | O1—C5—C10—C9 | 179.2 (4) |
O3—C1—C2—C3 | 178.6 (5) | C6—C5—C10—C17 | −179.9 (4) |
N1—C1—C2—C3 | 4.9 (8) | O1—C5—C10—C17 | −4.1 (6) |
O3—C1—C2—Br1 | −5.6 (7) | C12—N3—C11—N4 | 1.2 (7) |
N1—C1—C2—Br1 | −179.2 (4) | C12—N3—C11—O2 | −179.2 (4) |
C4—N2—C3—O4 | 177.9 (5) | C14—N4—C11—N3 | −2.2 (7) |
C4—N2—C3—C2 | −1.0 (7) | C14—N4—C11—O2 | 178.3 (4) |
C16—O4—C3—N2 | −2.1 (7) | C9—O2—C11—N3 | 178.6 (4) |
C16—O4—C3—C2 | 176.8 (5) | C9—O2—C11—N4 | −1.8 (6) |
C1—C2—C3—N2 | −1.4 (8) | C19—O7—C12—N3 | −0.9 (7) |
Br1—C2—C3—N2 | −177.1 (4) | C19—O7—C12—C13 | −180.0 (5) |
C1—C2—C3—O4 | 179.8 (5) | C11—N3—C12—O7 | −179.3 (4) |
Br1—C2—C3—O4 | 4.0 (7) | C11—N3—C12—C13 | −0.3 (6) |
C3—N2—C4—N1 | 0.0 (7) | O7—C12—C13—C14 | 179.5 (4) |
C3—N2—C4—O1 | 179.8 (4) | N3—C12—C13—C14 | 0.4 (6) |
C1—N1—C4—N2 | 3.2 (8) | O7—C12—C13—Br2 | 1.1 (5) |
C1—N1—C4—O1 | −176.5 (4) | N3—C12—C13—Br2 | −178.0 (3) |
C5—O1—C4—N2 | 12.3 (6) | C11—N4—C14—O8 | −179.9 (4) |
C5—O1—C4—N1 | −167.9 (4) | C11—N4—C14—C13 | 2.2 (6) |
C4—O1—C5—C6 | −121.7 (5) | C20—O8—C14—N4 | −6.1 (6) |
C4—O1—C5—C10 | 62.4 (5) | C20—O8—C14—C13 | 171.9 (5) |
O1—C5—C6—C7 | −177.4 (4) | C12—C13—C14—N4 | −1.4 (6) |
C10—C5—C6—C7 | −1.4 (7) | Br2—C13—C14—N4 | 177.0 (3) |
C5—C6—C7—C8 | −1.4 (8) | C12—C13—C14—O8 | −179.4 (4) |
C6—C7—C8—C9 | 2.1 (8) | Br2—C13—C14—O8 | −1.0 (5) |
C7—C8—C9—C10 | 0.1 (7) | C18—O5—C17—O6 | −2.0 (9) |
C7—C8—C9—O2 | −178.4 (4) | C18—O5—C17—C10 | 176.5 (5) |
C11—O2—C9—C10 | 72.1 (5) | C9—C10—C17—O6 | 39.9 (7) |
C11—O2—C9—C8 | −109.4 (5) | C5—C10—C17—O6 | −136.6 (6) |
C8—C9—C10—C5 | −2.8 (6) | C9—C10—C17—O5 | −138.5 (5) |
O2—C9—C10—C5 | 175.7 (4) | C5—C10—C17—O5 | 44.9 (6) |
Experimental details
Crystal data | |
Chemical formula | C20H18Br2N4O8 |
Mr | 602.20 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 293 |
a, b, c (Å) | 29.972 (5), 8.1392 (12), 23.061 (3) |
β (°) | 123.120 (3) |
V (Å3) | 4711.8 (12) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 3.49 |
Crystal size (mm) | 0.20 × 0.18 × 0.14 |
Data collection | |
Diffractometer | Bruker APEXII DUO CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.549, 0.640 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 25204, 8438, 4458 |
Rint | 0.066 |
(sin θ/λ)max (Å−1) | 0.756 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.064, 0.254, 1.02 |
No. of reflections | 8438 |
No. of parameters | 306 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.32, −1.56 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Acknowledgements
HKF and JHG thank Universiti Sains Malaysia (USM) for the Research University Golden Goose grant (No. 1001/PFIZIK/811012). JHG also thanks USM for the award of a USM fellowship. AMI is grateful to the Head of the Chemistry Department and the Director, National Institute of Technology-Karnataka for their encouragement. AMI also thanks USM for a partially sponsored research visit to the X-ray Crystallography Unit, School of Physics, USM.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Methyl-2,6-bis[(5-bromo-4,6-dimethoxypyrimidin-2-yl)oxy]benzoate is a derivative of herbicide showing excellent herbicidal effects on annual and perennial weeds and high-safety crops, especially rice and wheat and is applied to paddy fields, ploughed fields and non-agricultural land (Koichiro et al., 1988). Most sulphonylurea herbicides and all pyrimidinylbenzoate herbicides (He et al., 2007) such as nicofulfuron, amidosulfuron, halopyrazosulfuron, ethoxysulfuron, pyriminobac-methyl and pyriftalid, possess 4,6-dimethoxypyrimidin-2-yl groups (Li et al., 2006), while sulfometuron-methyl, a kind of sulfonylurea, contains 4,6-dimethylpyrimidin-2-yl groups, which suggests that the two disubstituted pyrimidin-2-yl groups possess high biological activity (Gerorge, 1983).
In the title compound (Fig. 1), the two pyrimidine rings with atom sequences N1/C1/C2/C3/N2/C4 and C11/N3/C12/C13/C14/N4 are essentially planar, with maximum deviations of -0.028 (6) and 0.010 (5) Å, respectively, at atoms C1 and N4. An interplanar angle of 75.1 (2)° is formed between these two pyrimidine rings. The central phenyl ring (C5-C10) is inclined at interplanar angles of 66.5 (2) and 71.9 (2)°, respectively, with respect to the N1/C1/C2/C3/N2/C4 and C11/N3/C12/C13/C14/N4 pyrimidine rings. The geometric parameters agree well with those observed in closely related structures (Fun et al., 2010; Li & Luo, 2006).
In the crystal structure, no classical hydrogen bond is observed. The interesting features of the crystal structure are the intermolecular short Br···Br [Br1···Br2i = 3.5328 (12) Å; (i) -x+1/2, y-1/2, -z+1/2] and Br···O [Br1···O8i = 3.301 (4) and Br2···O1ii = 3.206 (3) Å; (ii) x, -y+2, z+1/2] interactions, which are shorter than the sum of the Van der Waals radii of the relevant atoms, interconnecting adjacent molecules into two-molecule-thick arrays parallel to the bc plane. Weak intermolecular π–π aromatic stacking interactions [Cg1···Cg1iii = 3.526 (3) Å; (iii): -x, y, -z+1/2] involving the C11/N3/C12/C13/C14/N4 pyrimidine ring further stabilize the crystal structure.