metal-organic compounds
Hexakis(dimethyl sulfoxide-κO)thallium(III) trinitrate
aDepartment of Chemistry, Faculty of Science, University of Kurdistan, Sanandaj, Iran, and bDepartment of Chemistry, Iran University of Science and Technology, Tehran, Iran
*Correspondence e-mail: mghadermazi@yahoo.com
The title compound, [Tl(C2H6OS)6](NO3)3, consists of six dimethyl sulfoxide (DMSO) molecules coordinated to a TlIII atom, which lies on a axis, and three nitrate anions (3. symmetry) to neutralize the charge. The around the TlIII atom is octahedral, defined by six O atoms of the DMSO molecules. In the C—H⋯O hydrogen bonds are observed. One of the nitrate groups exhibits half-occupation.
Related literature
For general background to thallium(III) chemistry, see: Tóth & Gyõri (1994). For related structures, see: Aghabozorg, Ghadermazi et al. (2006); Aghabozorg, Ramezanipour et al. (2006); Ma et al. (2002); Notash et al. (2008).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536810022646/hy2321sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810022646/hy2321Isup2.hkl
To a DMSO solution of Tl(NO3)3.3H2O (1 mmol, 443 mg) was added piperazinediium pyridine-2,6-dicarboxylate (3 mmol, 759 mg) prepared as literature (Aghabozorg, Ghadermazi et al., 2006). The total volume of solution was 40 ml. The colourless crystals suitable for crystallography were obtained after six months.
H atoms on C atoms were positioned geometrically and refined as riding atoms, with C—H = 0.96 Å and Uiso(H) = 1.5Ueq(C). There is a high positive residual density of 1.97 e Å-3 near the Tl1 atom (distance 0.76 Å) due to considerable absorption effects which could not be completely corrected.
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).[Tl(C2H6OS)6](NO3)3 | Dx = 1.873 Mg m−3 |
Mr = 859.17 | Mo Kα radiation, λ = 0.71073 Å |
Trigonal, R3 | Cell parameters from 1197 reflections |
Hall symbol: -R 3 | θ = 2.3–34.3° |
a = 11.7207 (9) Å | µ = 5.78 mm−1 |
c = 19.209 (3) Å | T = 100 K |
V = 2285.3 (4) Å3 | Plate, colourless |
Z = 3 | 0.23 × 0.12 × 0.04 mm |
F(000) = 1278 |
Bruker APEXII CCD diffractometer | 1480 independent reflections |
Radiation source: fine-focus sealed tube | 1480 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.036 |
ϕ and ω scans | θmax = 30.0°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −16→16 |
Tmin = 0.442, Tmax = 0.786 | k = −16→16 |
9649 measured reflections | l = −27→27 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.022 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.058 | H-atom parameters constrained |
S = 0.99 | w = 1/[σ2(Fo2) + (0.040P)2 + 9.P] where P = (Fo2 + 2Fc2)/3 |
1480 reflections | (Δ/σ)max < 0.001 |
59 parameters | Δρmax = 1.97 e Å−3 |
0 restraints | Δρmin = −0.76 e Å−3 |
[Tl(C2H6OS)6](NO3)3 | Z = 3 |
Mr = 859.17 | Mo Kα radiation |
Trigonal, R3 | µ = 5.78 mm−1 |
a = 11.7207 (9) Å | T = 100 K |
c = 19.209 (3) Å | 0.23 × 0.12 × 0.04 mm |
V = 2285.3 (4) Å3 |
Bruker APEXII CCD diffractometer | 1480 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1480 reflections with I > 2σ(I) |
Tmin = 0.442, Tmax = 0.786 | Rint = 0.036 |
9649 measured reflections |
R[F2 > 2σ(F2)] = 0.022 | 0 restraints |
wR(F2) = 0.058 | H-atom parameters constrained |
S = 0.99 | Δρmax = 1.97 e Å−3 |
1480 reflections | Δρmin = −0.76 e Å−3 |
59 parameters |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Tl1 | 0.6667 | 0.3333 | 0.3333 | 0.01735 (8) | |
S1 | 0.47065 (6) | 0.40706 (7) | 0.24746 (4) | 0.02613 (15) | |
N1 | 0.0000 | 0.0000 | 0.2520 (2) | 0.0268 (8) | |
O3 | 0.48799 (19) | 0.29141 (19) | 0.27294 (11) | 0.0235 (4) | |
O1 | 0.1049 (2) | 0.1084 (2) | 0.25261 (16) | 0.0383 (5) | |
C1 | 0.3450 (3) | 0.4021 (3) | 0.30137 (19) | 0.0333 (6) | |
H1A | 0.3792 | 0.4312 | 0.3474 | 0.050* | |
H1B | 0.2722 | 0.3136 | 0.3034 | 0.050* | |
H1C | 0.3158 | 0.4589 | 0.2824 | 0.050* | |
C2 | 0.3806 (4) | 0.3443 (5) | 0.16924 (19) | 0.0498 (11) | |
H2A | 0.4345 | 0.3328 | 0.1355 | 0.075* | |
H2B | 0.3554 | 0.4051 | 0.1515 | 0.075* | |
H2C | 0.3031 | 0.2610 | 0.1783 | 0.075* | |
N2 | 0.3333 | 0.6667 | 0.1861 (4) | 0.0280 (17)* | 0.50 |
O2 | 0.3414 (8) | 0.5668 (8) | 0.1413 (4) | 0.0609 (17)* | 0.50 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Tl1 | 0.01458 (8) | 0.01458 (8) | 0.02288 (12) | 0.00729 (4) | 0.000 | 0.000 |
S1 | 0.0176 (3) | 0.0250 (3) | 0.0332 (4) | 0.0087 (2) | −0.0008 (2) | 0.0090 (2) |
N1 | 0.0221 (11) | 0.0221 (11) | 0.036 (2) | 0.0110 (6) | 0.000 | 0.000 |
O3 | 0.0209 (9) | 0.0206 (8) | 0.0287 (9) | 0.0103 (7) | −0.0054 (7) | −0.0025 (7) |
O1 | 0.0234 (10) | 0.0229 (10) | 0.0617 (16) | 0.0063 (8) | −0.0014 (10) | −0.0006 (10) |
C1 | 0.0278 (14) | 0.0317 (15) | 0.0436 (17) | 0.0173 (12) | −0.0005 (12) | −0.0059 (12) |
C2 | 0.0282 (16) | 0.094 (3) | 0.0273 (15) | 0.0302 (19) | −0.0020 (12) | 0.0109 (18) |
Tl1—O3i | 2.2234 (19) | N1—O1vii | 1.250 (2) |
Tl1—O3ii | 2.2235 (19) | C1—H1A | 0.9600 |
Tl1—O3iii | 2.2235 (19) | C1—H1B | 0.9600 |
Tl1—O3iv | 2.2235 (19) | C1—H1C | 0.9600 |
Tl1—O3 | 2.2235 (19) | C2—H2A | 0.9600 |
Tl1—O3v | 2.2235 (19) | C2—H2B | 0.9600 |
S1—O3 | 1.547 (2) | C2—H2C | 0.9600 |
S1—C2 | 1.771 (4) | N2—O2viii | 1.226 (8) |
S1—C1 | 1.777 (3) | N2—O2ix | 1.226 (8) |
N1—O1 | 1.250 (2) | N2—O2x | 1.226 (8) |
N1—O1vi | 1.250 (2) | O2—N2x | 1.226 (8) |
O3i—Tl1—O3ii | 95.26 (7) | O1—N1—O1vii | 119.993 (9) |
O3i—Tl1—O3iii | 180.0 | O1vi—N1—O1vii | 119.993 (9) |
O3ii—Tl1—O3iii | 84.74 (7) | S1—O3—Tl1 | 119.56 (11) |
O3i—Tl1—O3iv | 84.74 (7) | S1—C1—H1A | 109.5 |
O3ii—Tl1—O3iv | 180.0 | S1—C1—H1B | 109.5 |
O3iii—Tl1—O3iv | 95.26 (7) | H1A—C1—H1B | 109.5 |
O3i—Tl1—O3 | 84.74 (7) | S1—C1—H1C | 109.5 |
O3ii—Tl1—O3 | 84.74 (7) | H1A—C1—H1C | 109.5 |
O3iii—Tl1—O3 | 95.26 (7) | H1B—C1—H1C | 109.5 |
O3iv—Tl1—O3 | 95.26 (7) | S1—C2—H2A | 109.5 |
O3i—Tl1—O3v | 95.26 (7) | S1—C2—H2B | 109.5 |
O3ii—Tl1—O3v | 95.26 (7) | H2A—C2—H2B | 109.5 |
O3iii—Tl1—O3v | 84.74 (7) | S1—C2—H2C | 109.5 |
O3iv—Tl1—O3v | 84.74 (7) | H2A—C2—H2C | 109.5 |
O3—Tl1—O3v | 180.0 | H2B—C2—H2C | 109.5 |
O3—S1—C2 | 102.52 (19) | O2viii—N2—O2ix | 119.14 (17) |
O3—S1—C1 | 104.88 (14) | O2viii—N2—O2x | 119.14 (17) |
C2—S1—C1 | 99.72 (17) | O2ix—N2—O2x | 119.13 (17) |
O1—N1—O1vi | 119.993 (9) | ||
C2—S1—O3—Tl1 | 148.95 (15) | O2x—N2—O2—O2viii | 112.8 (4) |
C1—S1—O3—Tl1 | −107.29 (16) | O2xi—N2—O2—O2viii | 157.9 (4) |
O3i—Tl1—O3—S1 | 46.66 (9) | O2xii—N2—O2—O2viii | 67.8 (6) |
O3ii—Tl1—O3—S1 | 142.45 (17) | N2x—N2—O2—O2ix | −112.8 (4) |
O3iii—Tl1—O3—S1 | −133.34 (9) | O2viii—N2—O2—O2ix | 134.3 (9) |
O3iv—Tl1—O3—S1 | −37.55 (17) | O2x—N2—O2—O2ix | −112.8 (4) |
N2x—N2—O2—O2viii | 112.8 (4) | O2xi—N2—O2—O2ix | −67.8 (6) |
O2ix—N2—O2—O2viii | −134.3 (9) | O2xii—N2—O2—O2ix | −157.9 (4) |
Symmetry codes: (i) y+1/3, −x+y+2/3, −z+2/3; (ii) x−y+1/3, x−1/3, −z+2/3; (iii) −y+1, x−y, z; (iv) −x+y+1, −x+1, z; (v) −x+4/3, −y+2/3, −z+2/3; (vi) −y, x−y, z; (vii) −x+y, −x, z; (viii) x−y+2/3, x+1/3, −z+1/3; (ix) y−1/3, −x+y+1/3, −z+1/3; (x) −x+2/3, −y+4/3, −z+1/3; (xi) −x+y, −x+1, z; (xii) −y+1, x−y+1, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
C1—H1B···O1 | 0.96 | 2.42 | 3.311 (4) | 154 |
C1—H1C···O2ix | 0.96 | 2.54 | 3.448 (11) | 158 |
C2—H2A···O1viii | 0.96 | 2.55 | 3.380 (6) | 145 |
C2—H2B···O2 | 0.96 | 1.99 | 2.915 (10) | 161 |
C2—H2C···O1 | 0.96 | 2.55 | 3.423 (6) | 152 |
Symmetry codes: (viii) x−y+2/3, x+1/3, −z+1/3; (ix) y−1/3, −x+y+1/3, −z+1/3. |
Experimental details
Crystal data | |
Chemical formula | [Tl(C2H6OS)6](NO3)3 |
Mr | 859.17 |
Crystal system, space group | Trigonal, R3 |
Temperature (K) | 100 |
a, c (Å) | 11.7207 (9), 19.209 (3) |
V (Å3) | 2285.3 (4) |
Z | 3 |
Radiation type | Mo Kα |
µ (mm−1) | 5.78 |
Crystal size (mm) | 0.23 × 0.12 × 0.04 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.442, 0.786 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9649, 1480, 1480 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.703 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.022, 0.058, 0.99 |
No. of reflections | 1480 |
No. of parameters | 59 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.97, −0.76 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C1—H1B···O1 | 0.96 | 2.42 | 3.311 (4) | 154 |
C1—H1C···O2i | 0.96 | 2.54 | 3.448 (11) | 158 |
C2—H2A···O1ii | 0.96 | 2.55 | 3.380 (6) | 145 |
C2—H2B···O2 | 0.96 | 1.99 | 2.915 (10) | 161 |
C2—H2C···O1 | 0.96 | 2.55 | 3.423 (6) | 152 |
Symmetry codes: (i) y−1/3, −x+y+1/3, −z+1/3; (ii) x−y+2/3, x+1/3, −z+1/3. |
Acknowledgements
The authors gratefully acknowledge University of Kurdistan for financial support of this work.
References
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There are some reports on coordination of dimethyl sulfoxide (DMSO) as a neutral ligand to Tl(III), such as a triiodo complex [TlI3(DMSO)2] (Ma et al., 2002) and [Tl(dm4bt)2(NO3)(DMSO)] (dm4bt = 2,2'-dimethyl-4,4'-bithiazole) (Notash et al., 2008). Thallium(III) can be classified as a medium-soft metal ion in contrast to the other trivalent ions of group 13, aluminium(III), gallium(III) and indium(III), which are regarded as hard from their coordination properties (Tóth & Gyõri, 1994). The title compound has a coordination number of six around the metal (Figs. 1 and 2). However, the coordination numbers 4 to 9 are observed in different thallium(III) complexes (Aghabozorg, Ramezanipour et al., 2006). Compared with [Tl(dm4bt)2(NO3)(DMSO)] and [TlI3(DMSO)2] mentioned above, in which the bond lengths of Tl(III) to O atoms of DMSO are 2.644 (7) and 2.468 (6) Å, the title compound has shorter Tl—O bonds [2.223 (2)–2.224 (2) Å]. This can be attributed to the less hindrance around the Tl centre. Also, compared with [Tl2(pydcH)3(pydc)(H2O)2] (pydcH2 = pyridine-2,6-dicarboxylic acid) (Aghabozorg, Ramezanipour et al., 2006) and (pipzH2)[Tl2(pydc)2Cl4(H2O)2].4H2O (pipz = piperazine) (Aghabozorg, Ghadermazi et al., 2006), whose Tl—O bond lengths vary in the range of 2.680 (4)–3.122 (4) and 2.436 (5)–2.508 (5) Å, respectively, again the Tl—O bond lengths in the title compound are obviously shorter. As shown in Table 1, only C—H···O hydrogen bonds can be seen in the lattice. The shortest C—H···O bond is C2—H2B···O2 with the best angle.