organic compounds
2-{3-[1-(3,4-Dichlorophenyl)ethyl]-1,3-thiazolidin-2-ylidene}malononitrile
aCollege of Chemistry and Molecular Engineering, Qingdao University of Science and Technology, Qingdao 266042, People's Republic of China
*Correspondence e-mail: qknhs@yahoo.com.cn
In the title compound, C14H11Cl2N3S, the thiazole ring is in an with the –CH2– group bonded to the S atom forming the flap. The is stabilized by weak intermolecular C—H⋯Cl and C—H⋯N hydrogen bonds.
Related literature
For the biological activity of thiazole componds, see: Hense et al. (2002). For the synthesis of the title compound, see: Jeschke et al. (2002). For a related structure, see: Cunico, et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536810024049/lh5066sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810024049/lh5066Isup2.hkl
Following the procedure of Jeschke, et al. (2002) 2-(thiazolidin-2-ylidene)malononitrile 15.1 g(0.10 mol) and potassium carbonate 16.6 g(0.12 mmol) were dissolved in N,N-dimethylformamide(DMF) (55 ml) and stirred 0.5 h at room temperature. Then 1,2-dichloro-4-(1-chloroethyl)benzene 20.9 g (0.10 mmol) was added, dropwise within 2 h at 318 K. The mixture was then stirred for 8 h at 358 K. After cooling at room temperature, 20 ml of water was added. The mixture was extracted with CH2Cl2 (15 ml) and the organic layer was washed with water and dried over anhydrous sodium sulfate. The excess CH2Cl2 was removed on a water vacuum pump obtaining the oily product which was rerystallized from methanol to afford the title compound 26.8 g (83% yield). Single crystals suitable for X-ray measurement were obtained by recrystallization of the title compound from a mixture of acetone and methanol at room temperature.
All C-bound H atoms were placed in calculated positions, with C—H = 0.95–1.00 Å, and included in the final cycles of
using a riding model, with Uiso(H) = 1.2Ueq(C).Data collection: CrystalClear (Rigaku, 2005); cell
CrystalClear (Rigaku, 2005); data reduction: CrystalClear (Rigaku, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of (I), with displacement ellipsoids drawn at the 50% probability level. |
C14H11Cl2N3S | F(000) = 664 |
Mr = 324.22 | Dx = 1.503 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 3119 reflections |
a = 7.5900 (15) Å | θ = 2.1–27.2° |
b = 14.957 (3) Å | µ = 0.59 mm−1 |
c = 12.783 (3) Å | T = 113 K |
β = 99.03 (3)° | Prism, black |
V = 1433.2 (5) Å3 | 0.14 × 0.12 × 0.10 mm |
Z = 4 |
Rigaku Saturn diffractometer | 2493 independent reflections |
Radiation source: fine-focus sealed tube | 2374 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.032 |
Detector resolution: 7.31 pixels mm-1 | θmax = 25.0°, θmin = 2.7° |
ω scans | h = −9→8 |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | k = −17→17 |
Tmin = 0.922, Tmax = 0.943 | l = −15→13 |
8837 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.102 | H-atom parameters constrained |
S = 1.17 | w = 1/[σ2(Fo2) + (0.0287P)2 + 2.7247P] where P = (Fo2 + 2Fc2)/3 |
2493 reflections | (Δ/σ)max < 0.001 |
182 parameters | Δρmax = 0.98 e Å−3 |
0 restraints | Δρmin = −0.31 e Å−3 |
C14H11Cl2N3S | V = 1433.2 (5) Å3 |
Mr = 324.22 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 7.5900 (15) Å | µ = 0.59 mm−1 |
b = 14.957 (3) Å | T = 113 K |
c = 12.783 (3) Å | 0.14 × 0.12 × 0.10 mm |
β = 99.03 (3)° |
Rigaku Saturn diffractometer | 2493 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | 2374 reflections with I > 2σ(I) |
Tmin = 0.922, Tmax = 0.943 | Rint = 0.032 |
8837 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.102 | H-atom parameters constrained |
S = 1.17 | Δρmax = 0.98 e Å−3 |
2493 reflections | Δρmin = −0.31 e Å−3 |
182 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.64889 (9) | 0.08386 (5) | −0.14263 (5) | 0.01840 (19) | |
Cl1 | 0.92712 (10) | 0.58799 (5) | 0.13883 (6) | 0.0241 (2) | |
Cl2 | 0.74727 (10) | 0.62951 (5) | −0.09604 (6) | 0.0243 (2) | |
N1 | 0.7016 (3) | 0.19511 (15) | 0.01236 (18) | 0.0156 (5) | |
N2 | 0.2888 (3) | 0.16439 (17) | 0.1598 (2) | 0.0228 (6) | |
N3 | 0.1985 (3) | 0.01685 (18) | −0.1358 (2) | 0.0276 (6) | |
C1 | 0.5784 (4) | 0.13843 (17) | −0.0353 (2) | 0.0146 (6) | |
C2 | 0.8768 (4) | 0.1872 (2) | −0.0228 (2) | 0.0194 (6) | |
H2A | 0.9508 | 0.1414 | 0.0192 | 0.023* | |
H2B | 0.9410 | 0.2450 | −0.0150 | 0.023* | |
C3 | 0.8370 (4) | 0.1601 (2) | −0.1382 (2) | 0.0199 (6) | |
H3A | 0.9408 | 0.1297 | −0.1607 | 0.024* | |
H3B | 0.8047 | 0.2127 | −0.1843 | 0.024* | |
C4 | 0.4095 (4) | 0.11831 (18) | −0.0098 (2) | 0.0161 (6) | |
C5 | 0.3460 (4) | 0.14437 (18) | 0.0850 (2) | 0.0174 (6) | |
C6 | 0.2938 (4) | 0.06174 (19) | −0.0798 (2) | 0.0184 (6) | |
C7 | 0.6790 (4) | 0.26246 (19) | 0.0927 (2) | 0.0177 (6) | |
H7A | 0.5539 | 0.2575 | 0.1076 | 0.021* | |
C8 | 0.8041 (4) | 0.2423 (2) | 0.1955 (2) | 0.0242 (7) | |
H8A | 0.7885 | 0.1800 | 0.2160 | 0.036* | |
H8B | 0.7762 | 0.2821 | 0.2516 | 0.036* | |
H8C | 0.9279 | 0.2518 | 0.1850 | 0.036* | |
C9 | 0.6999 (4) | 0.35513 (18) | 0.0458 (2) | 0.0158 (6) | |
C10 | 0.7943 (4) | 0.42212 (19) | 0.1048 (2) | 0.0178 (6) | |
H10A | 0.8506 | 0.4103 | 0.1752 | 0.021* | |
C11 | 0.8072 (4) | 0.50688 (18) | 0.0613 (2) | 0.0173 (6) | |
C12 | 0.7274 (4) | 0.52438 (19) | −0.0414 (2) | 0.0187 (6) | |
C13 | 0.6305 (4) | 0.45847 (19) | −0.1013 (2) | 0.0197 (6) | |
H13A | 0.5743 | 0.4708 | −0.1716 | 0.024* | |
C14 | 0.6165 (4) | 0.37428 (19) | −0.0575 (2) | 0.0186 (6) | |
H14A | 0.5494 | 0.3291 | −0.0981 | 0.022* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0204 (4) | 0.0169 (4) | 0.0180 (4) | 0.0004 (3) | 0.0032 (3) | −0.0022 (3) |
Cl1 | 0.0280 (4) | 0.0179 (4) | 0.0271 (4) | −0.0050 (3) | 0.0062 (3) | −0.0057 (3) |
Cl2 | 0.0257 (4) | 0.0176 (4) | 0.0315 (4) | 0.0026 (3) | 0.0111 (3) | 0.0080 (3) |
N1 | 0.0142 (12) | 0.0136 (12) | 0.0192 (12) | −0.0005 (9) | 0.0035 (9) | 0.0004 (9) |
N2 | 0.0222 (13) | 0.0214 (13) | 0.0257 (14) | −0.0027 (10) | 0.0068 (11) | 0.0004 (11) |
N3 | 0.0236 (14) | 0.0267 (15) | 0.0314 (15) | −0.0036 (11) | 0.0010 (12) | −0.0027 (12) |
C1 | 0.0171 (14) | 0.0111 (13) | 0.0149 (13) | 0.0047 (10) | 0.0002 (11) | 0.0030 (10) |
C2 | 0.0134 (14) | 0.0202 (15) | 0.0250 (15) | −0.0009 (11) | 0.0038 (11) | −0.0006 (12) |
C3 | 0.0170 (14) | 0.0221 (15) | 0.0217 (15) | −0.0002 (12) | 0.0063 (12) | 0.0011 (12) |
C4 | 0.0170 (14) | 0.0119 (13) | 0.0183 (14) | −0.0010 (11) | −0.0005 (11) | 0.0021 (11) |
C5 | 0.0141 (14) | 0.0124 (14) | 0.0248 (16) | 0.0001 (10) | 0.0001 (12) | 0.0037 (12) |
C6 | 0.0177 (14) | 0.0183 (15) | 0.0198 (15) | 0.0008 (12) | 0.0047 (12) | 0.0037 (12) |
C7 | 0.0170 (14) | 0.0177 (15) | 0.0193 (15) | −0.0024 (11) | 0.0061 (11) | −0.0039 (11) |
C8 | 0.0330 (17) | 0.0201 (15) | 0.0191 (15) | −0.0044 (13) | 0.0032 (13) | 0.0022 (12) |
C9 | 0.0137 (13) | 0.0135 (14) | 0.0213 (15) | −0.0006 (10) | 0.0058 (11) | −0.0005 (11) |
C10 | 0.0168 (14) | 0.0203 (15) | 0.0174 (14) | 0.0020 (11) | 0.0059 (11) | −0.0023 (11) |
C11 | 0.0151 (14) | 0.0128 (14) | 0.0255 (15) | −0.0006 (11) | 0.0074 (11) | −0.0044 (11) |
C12 | 0.0186 (14) | 0.0162 (14) | 0.0232 (15) | 0.0030 (11) | 0.0095 (12) | 0.0035 (12) |
C13 | 0.0178 (14) | 0.0222 (15) | 0.0195 (15) | 0.0039 (12) | 0.0040 (11) | 0.0016 (12) |
C14 | 0.0149 (14) | 0.0186 (15) | 0.0219 (15) | −0.0018 (11) | 0.0019 (11) | −0.0032 (12) |
S1—C1 | 1.751 (3) | C4—C6 | 1.429 (4) |
S1—C3 | 1.821 (3) | C7—C8 | 1.526 (4) |
Cl1—C11 | 1.732 (3) | C7—C9 | 1.528 (4) |
Cl2—C12 | 1.736 (3) | C7—H7A | 1.0000 |
N1—C1 | 1.336 (3) | C8—H8A | 0.9800 |
N1—C7 | 1.468 (3) | C8—H8B | 0.9800 |
N1—C2 | 1.474 (4) | C8—H8C | 0.9800 |
N2—C5 | 1.150 (4) | C9—C10 | 1.384 (4) |
N3—C6 | 1.151 (4) | C9—C14 | 1.402 (4) |
C1—C4 | 1.404 (4) | C10—C11 | 1.394 (4) |
C2—C3 | 1.514 (4) | C10—H10A | 0.9500 |
C2—H2A | 0.9900 | C11—C12 | 1.382 (4) |
C2—H2B | 0.9900 | C12—C13 | 1.386 (4) |
C3—H3A | 0.9900 | C13—C14 | 1.389 (4) |
C3—H3B | 0.9900 | C13—H13A | 0.9500 |
C4—C5 | 1.427 (4) | C14—H14A | 0.9500 |
C1—S1—C3 | 91.05 (13) | N1—C7—H7A | 107.6 |
C1—N1—C7 | 127.2 (2) | C8—C7—H7A | 107.6 |
C1—N1—C2 | 114.2 (2) | C9—C7—H7A | 107.6 |
C7—N1—C2 | 118.6 (2) | C7—C8—H8A | 109.5 |
N1—C1—C4 | 129.0 (3) | C7—C8—H8B | 109.5 |
N1—C1—S1 | 112.0 (2) | H8A—C8—H8B | 109.5 |
C4—C1—S1 | 119.0 (2) | C7—C8—H8C | 109.5 |
N1—C2—C3 | 105.5 (2) | H8A—C8—H8C | 109.5 |
N1—C2—H2A | 110.6 | H8B—C8—H8C | 109.5 |
C3—C2—H2A | 110.6 | C10—C9—C14 | 118.9 (3) |
N1—C2—H2B | 110.6 | C10—C9—C7 | 121.3 (2) |
C3—C2—H2B | 110.6 | C14—C9—C7 | 119.7 (2) |
H2A—C2—H2B | 108.8 | C9—C10—C11 | 120.3 (3) |
C2—C3—S1 | 103.50 (19) | C9—C10—H10A | 119.9 |
C2—C3—H3A | 111.1 | C11—C10—H10A | 119.9 |
S1—C3—H3A | 111.1 | C12—C11—C10 | 120.2 (3) |
C2—C3—H3B | 111.1 | C12—C11—Cl1 | 121.6 (2) |
S1—C3—H3B | 111.1 | C10—C11—Cl1 | 118.2 (2) |
H3A—C3—H3B | 109.0 | C11—C12—C13 | 120.3 (3) |
C1—C4—C5 | 125.5 (2) | C11—C12—Cl2 | 120.0 (2) |
C1—C4—C6 | 118.4 (3) | C13—C12—Cl2 | 119.6 (2) |
C5—C4—C6 | 115.9 (2) | C12—C13—C14 | 119.3 (3) |
N2—C5—C4 | 177.5 (3) | C12—C13—H13A | 120.3 |
N3—C6—C4 | 179.0 (3) | C14—C13—H13A | 120.3 |
N1—C7—C8 | 110.0 (2) | C13—C14—C9 | 120.9 (3) |
N1—C7—C9 | 108.5 (2) | C13—C14—H14A | 119.6 |
C8—C7—C9 | 115.4 (2) | C9—C14—H14A | 119.6 |
C7—N1—C1—C4 | −11.5 (4) | C1—N1—C7—C9 | −114.5 (3) |
C2—N1—C1—C4 | 169.1 (3) | C2—N1—C7—C9 | 64.9 (3) |
C7—N1—C1—S1 | 169.1 (2) | N1—C7—C9—C10 | −138.4 (3) |
C2—N1—C1—S1 | −10.3 (3) | C8—C7—C9—C10 | −14.5 (4) |
C3—S1—C1—N1 | −11.7 (2) | N1—C7—C9—C14 | 44.2 (3) |
C3—S1—C1—C4 | 168.8 (2) | C8—C7—C9—C14 | 168.0 (3) |
C1—N1—C2—C3 | 32.4 (3) | C14—C9—C10—C11 | −0.6 (4) |
C7—N1—C2—C3 | −147.1 (2) | C7—C9—C10—C11 | −178.1 (2) |
N1—C2—C3—S1 | −37.5 (2) | C9—C10—C11—C12 | −0.7 (4) |
C1—S1—C3—C2 | 28.5 (2) | C9—C10—C11—Cl1 | −180.0 (2) |
N1—C1—C4—C5 | −11.2 (5) | C10—C11—C12—C13 | 1.5 (4) |
S1—C1—C4—C5 | 168.2 (2) | Cl1—C11—C12—C13 | −179.3 (2) |
N1—C1—C4—C6 | 173.6 (3) | C10—C11—C12—Cl2 | −178.8 (2) |
S1—C1—C4—C6 | −7.0 (3) | Cl1—C11—C12—Cl2 | 0.4 (3) |
C1—C4—C5—N2 | 169 (7) | C11—C12—C13—C14 | −0.9 (4) |
C6—C4—C5—N2 | −16 (7) | Cl2—C12—C13—C14 | 179.4 (2) |
C1—C4—C6—N3 | −147 (20) | C12—C13—C14—C9 | −0.5 (4) |
C5—C4—C6—N3 | 37 (20) | C10—C9—C14—C13 | 1.2 (4) |
C1—N1—C7—C8 | 118.5 (3) | C7—C9—C14—C13 | 178.8 (3) |
C2—N1—C7—C8 | −62.1 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C3—H3A···N3i | 0.99 | 2.57 | 3.477 (4) | 153 |
C7—H7A···Cl2ii | 1.00 | 2.83 | 3.623 (3) | 137 |
Symmetry codes: (i) x+1, y, z; (ii) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | C14H11Cl2N3S |
Mr | 324.22 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 113 |
a, b, c (Å) | 7.5900 (15), 14.957 (3), 12.783 (3) |
β (°) | 99.03 (3) |
V (Å3) | 1433.2 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.59 |
Crystal size (mm) | 0.14 × 0.12 × 0.10 |
Data collection | |
Diffractometer | Rigaku Saturn diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2005) |
Tmin, Tmax | 0.922, 0.943 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8837, 2493, 2374 |
Rint | 0.032 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.102, 1.17 |
No. of reflections | 2493 |
No. of parameters | 182 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.98, −0.31 |
Computer programs: CrystalClear (Rigaku, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C3—H3A···N3i | 0.99 | 2.57 | 3.477 (4) | 153.1 |
C7—H7A···Cl2ii | 1.00 | 2.83 | 3.623 (3) | 136.9 |
Symmetry codes: (i) x+1, y, z; (ii) −x+1, −y+1, −z. |
References
Cunico, W., Gomes, C. R. B., Wardell, S. M. S. V., Low, J. N. & Glidewell, C. (2007). Acta Cryst. C63, o411–o414. Web of Science CSD CrossRef IUCr Journals Google Scholar
Hense, A., Fischer, R. & Gesing, E. R. (2002). WO Patent 2002096872. Google Scholar
Jeschke, P., Beck, M. E. & Kraemer, W. (2002). DE Patent 10119423. Google Scholar
Rigaku (2005). CrystalClear. Rigaku Corporation, Tokyo, Japan. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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Recently, compounds containing the 2-(thiazolidin-2-ylidene)malononitrile group have attracted much interest because compounds containing a thiazole ring system are well known as efficient insecticides and pesticides (Hense, et al., 2002). In an attempt to synthesize these types of compounds with higher biological activity the title compound (I) was synthesized and its crystal structure is reported herein.
In (I) (Fig. 1), the bond lengths angles are normal and in a agreement with those common to a previously reported structure (Cunico, et al., 2007). The thiazole ring is in an envelope conformation with the -CH2- group bonded to the S atom forming the flap. The crystal structure is stabilized by weak intermolecular C—H···Cl and C—H···N hydrogen bonds.