organic compounds
6-(4-Aminophenyl)-2-ethoxy-4-(2-thienyl)nicotinonitrile
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bCrystal Materials Research Unit, Department of Chemistry, Faculty of Science, Prince of Songkla University, Hat-Yai, Songkhla 90112, Thailand, and cDepartment of Chemistry, National Institute of Technology–Karnataka, Surathkal, Mangalore 575 025, India
*Correspondence e-mail: hkfun@usm.my
In the title nicotinonitrile derivative, C18H15N3OS, the central pyridyl ring makes dihedral angles of 25.22 (10) and 24.80 (16)° with the 4-aminophenyl and thiophene rings, respectively. The thiophene ring is disordered over two orientations by rotation around the C(thiophene)—C(pyridine) bond; the occupancies are 0.858 (2) and 0.142 (2). The ethoxy group is slightly twisted from the attached pyridyl ring [C—O—C—C torsion angle = 171.13 (16)°]. In the molecules are linked by N—H⋯N hydrogen bonds into chains along [010]. These chains are stacked along the a axis. C—H⋯π weak interactions involving the thiophene ring are observed.
Related literature
For reference bond-length data, see: Allen et al. (1987). For the synthesis and applications of nicotinonitrile derivatives, see: Amr & Abdulla (2006); Borgna et al. (1993); Fun et al. (2009); Goda et al. (2004); Kamal et al. (2007); Malinka et al. (1998). For related structures, see: Chantrapromma et al. (2009, 2010); Fun et al. (2009). For the stability of the temperature controller used in the data collection, see Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S160053681002369X/wn2394sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681002369X/wn2394Isup2.hkl
(2E)-1-(4-Aminophenyl)-3-(2-thienyl)prop-2-en-1-one (0.34 g, 0.0015 mole) which was synthesized according to a previous procedure (Fun et al., 2009) was added with continuous stirring to a freshly prepared sodium alkoxide solution (0.0014 mole of sodium in 100 ml of ethanol). Malononitrile (1.30 g, 0.02 mol) was then added with continuous stirring at room temperature until the precipitate separated out. The resulting solid was filtered (yield 68%). Yellow plate-shaped single crystals of the title compound suitable for X-ray
were recrystalized from ethanol by the slow evaporation of the solvent at room temperature over several days. Mp. 470–471 K.The amino H atoms were located in difference maps and refined isotropically. The remaining H atoms were positioned geometrically and allowed to ride on their parent atoms, with d(C—H) = 0.93 Å for aromatic, 0.97 for CH2 and 0.96 Å for CH3 atoms. The Uiso values were constrained to be 1.5Ueq of the
for methyl H atoms and 1.2Ueq for the remaining carbon-bound H atoms. A rotating group model was used for the methyl groups. Atoms S1, C1, C2, C3 of the thiophene ring are disordered over two positions by rotation about the C4—C5 bond; the occupancies are 0.858 (2) and 0.142 (2).Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C18H15N3OS | Dx = 1.380 Mg m−3 |
Mr = 321.38 | Melting point = 470–471 K |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 3045 reflections |
a = 7.0751 (12) Å | θ = 1.9–26.0° |
b = 20.843 (4) Å | µ = 0.22 mm−1 |
c = 20.983 (4) Å | T = 100 K |
V = 3094.3 (9) Å3 | Plate, yellow |
Z = 8 | 0.35 × 0.11 × 0.04 mm |
F(000) = 1344 |
Bruker APEXII DUO CCD area-detector diffractometer | 3045 independent reflections |
Radiation source: sealed tube | 2188 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.092 |
ϕ and ω scans | θmax = 26.0°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −8→8 |
Tmin = 0.928, Tmax = 0.992 | k = −25→24 |
34805 measured reflections | l = −25→25 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.085 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0278P)2 + 1.8001P] where P = (Fo2 + 2Fc2)/3 |
3045 reflections | (Δ/σ)max < 0.001 |
233 parameters | Δρmax = 0.21 e Å−3 |
88 restraints | Δρmin = −0.32 e Å−3 |
C18H15N3OS | V = 3094.3 (9) Å3 |
Mr = 321.38 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 7.0751 (12) Å | µ = 0.22 mm−1 |
b = 20.843 (4) Å | T = 100 K |
c = 20.983 (4) Å | 0.35 × 0.11 × 0.04 mm |
Bruker APEXII DUO CCD area-detector diffractometer | 3045 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 2188 reflections with I > 2σ(I) |
Tmin = 0.928, Tmax = 0.992 | Rint = 0.092 |
34805 measured reflections |
R[F2 > 2σ(F2)] = 0.038 | 88 restraints |
wR(F2) = 0.085 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.21 e Å−3 |
3045 reflections | Δρmin = −0.32 e Å−3 |
233 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
O1 | 0.56053 (19) | 0.37231 (6) | 0.25979 (6) | 0.0190 (3) | |
N1 | 0.5847 (2) | 0.26630 (7) | 0.22980 (7) | 0.0163 (4) | |
N2 | 0.6671 (3) | 0.01670 (9) | 0.05279 (9) | 0.0245 (4) | |
N3 | 0.5866 (2) | 0.39328 (8) | 0.41791 (8) | 0.0245 (4) | |
C4 | 0.6016 (3) | 0.21000 (9) | 0.42677 (9) | 0.0167 (4) | |
S1 | 0.68410 (11) | 0.13404 (3) | 0.44617 (3) | 0.01858 (19) | 0.8583 (19) |
C1 | 0.6115 (5) | 0.14171 (15) | 0.52389 (16) | 0.0192 (7) | 0.8583 (19) |
H1A | 0.6270 | 0.1101 | 0.5547 | 0.023* | 0.8583 (19) |
C2 | 0.5284 (8) | 0.1996 (2) | 0.53499 (16) | 0.0168 (8) | 0.8583 (19) |
H2A | 0.4807 | 0.2124 | 0.5743 | 0.020* | 0.8583 (19) |
C3 | 0.5240 (8) | 0.2374 (2) | 0.4797 (2) | 0.0231 (10) | 0.8583 (19) |
H3A | 0.4718 | 0.2783 | 0.4791 | 0.028* | 0.8583 (19) |
S1X | 0.5077 (14) | 0.2515 (4) | 0.4850 (4) | 0.0200 (18)* | 0.1417 (19) |
C1X | 0.560 (5) | 0.1904 (12) | 0.5376 (10) | 0.021 (8)* | 0.1417 (19) |
H1XA | 0.5349 | 0.1919 | 0.5810 | 0.025* | 0.1417 (19) |
C2X | 0.643 (3) | 0.1399 (10) | 0.5079 (8) | 0.012 (5)* | 0.1417 (19) |
H2XA | 0.6719 | 0.1011 | 0.5274 | 0.014* | 0.1417 (19) |
C3X | 0.679 (3) | 0.1544 (8) | 0.4425 (9) | 0.0231 (10) | 0.14 |
H3XA | 0.7470 | 0.1284 | 0.4149 | 0.028* | 0.1417 (19) |
C5 | 0.6017 (3) | 0.23136 (9) | 0.36009 (9) | 0.0163 (4) | |
C6 | 0.6082 (3) | 0.18612 (9) | 0.31136 (9) | 0.0176 (4) | |
H6A | 0.6197 | 0.1429 | 0.3217 | 0.021* | |
C7 | 0.5978 (3) | 0.20381 (9) | 0.24772 (9) | 0.0164 (4) | |
C8 | 0.6032 (3) | 0.15594 (9) | 0.19636 (9) | 0.0158 (4) | |
C9 | 0.5488 (3) | 0.09205 (9) | 0.20666 (9) | 0.0203 (4) | |
H9A | 0.5016 | 0.0800 | 0.2463 | 0.024* | |
C10 | 0.5641 (3) | 0.04666 (9) | 0.15893 (9) | 0.0201 (4) | |
H10A | 0.5253 | 0.0047 | 0.1666 | 0.024* | |
C11 | 0.6372 (3) | 0.06310 (9) | 0.09920 (9) | 0.0178 (4) | |
C12 | 0.6864 (3) | 0.12704 (9) | 0.08808 (9) | 0.0181 (4) | |
H12A | 0.7319 | 0.1392 | 0.0483 | 0.022* | |
C13 | 0.6680 (3) | 0.17231 (9) | 0.13553 (9) | 0.0171 (4) | |
H13A | 0.6995 | 0.2147 | 0.1269 | 0.021* | |
C14 | 0.5779 (3) | 0.30963 (9) | 0.27536 (9) | 0.0168 (4) | |
C15 | 0.5874 (3) | 0.29610 (9) | 0.34132 (9) | 0.0163 (4) | |
C16 | 0.5537 (3) | 0.38737 (9) | 0.19226 (9) | 0.0197 (4) | |
H16A | 0.4594 | 0.3611 | 0.1712 | 0.024* | |
H16B | 0.6754 | 0.3791 | 0.1727 | 0.024* | |
C17 | 0.5035 (3) | 0.45707 (9) | 0.18628 (10) | 0.0248 (5) | |
H17A | 0.5012 | 0.4689 | 0.1421 | 0.037* | |
H17B | 0.5961 | 0.4825 | 0.2082 | 0.037* | |
H17C | 0.3813 | 0.4644 | 0.2047 | 0.037* | |
C18 | 0.5861 (3) | 0.34927 (9) | 0.38470 (9) | 0.0181 (4) | |
H1N2 | 0.586 (3) | −0.0177 (12) | 0.0555 (11) | 0.039 (7)* | |
H2N2 | 0.678 (3) | 0.0308 (10) | 0.0137 (11) | 0.029 (6)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0293 (7) | 0.0135 (7) | 0.0143 (7) | 0.0002 (6) | 0.0006 (6) | 0.0000 (6) |
N1 | 0.0175 (8) | 0.0123 (9) | 0.0191 (9) | −0.0004 (7) | 0.0020 (7) | −0.0014 (7) |
N2 | 0.0355 (10) | 0.0196 (10) | 0.0184 (9) | −0.0040 (8) | −0.0002 (9) | −0.0040 (8) |
N3 | 0.0352 (10) | 0.0189 (10) | 0.0195 (9) | 0.0024 (8) | 0.0004 (8) | 0.0006 (8) |
C4 | 0.0162 (9) | 0.0156 (10) | 0.0182 (10) | 0.0001 (8) | −0.0005 (8) | 0.0003 (8) |
S1 | 0.0220 (3) | 0.0159 (4) | 0.0179 (3) | 0.0049 (3) | 0.0012 (2) | 0.0032 (3) |
C1 | 0.0239 (16) | 0.0225 (16) | 0.0113 (15) | 0.0003 (12) | 0.0022 (13) | 0.0024 (13) |
C2 | 0.015 (2) | 0.0202 (19) | 0.0150 (15) | 0.0005 (13) | 0.0000 (11) | 0.0003 (10) |
C3 | 0.0245 (19) | 0.019 (2) | 0.025 (2) | −0.0002 (17) | 0.0011 (13) | −0.0016 (17) |
C3X | 0.0245 (19) | 0.019 (2) | 0.025 (2) | −0.0002 (17) | 0.0011 (13) | −0.0016 (17) |
C5 | 0.0132 (9) | 0.0181 (10) | 0.0177 (10) | 0.0004 (8) | 0.0000 (8) | 0.0014 (8) |
C6 | 0.0178 (9) | 0.0123 (10) | 0.0227 (11) | 0.0007 (8) | 0.0019 (8) | 0.0005 (8) |
C7 | 0.0136 (9) | 0.0154 (10) | 0.0202 (10) | −0.0013 (8) | 0.0019 (8) | −0.0003 (9) |
C8 | 0.0157 (9) | 0.0144 (10) | 0.0172 (10) | 0.0012 (8) | 0.0009 (8) | 0.0002 (8) |
C9 | 0.0222 (10) | 0.0195 (11) | 0.0192 (10) | −0.0001 (9) | 0.0026 (8) | 0.0016 (9) |
C10 | 0.0247 (10) | 0.0138 (10) | 0.0217 (11) | −0.0015 (8) | −0.0007 (9) | 0.0009 (8) |
C11 | 0.0179 (10) | 0.0191 (10) | 0.0163 (10) | 0.0024 (8) | −0.0038 (8) | −0.0024 (8) |
C12 | 0.0171 (9) | 0.0217 (11) | 0.0156 (10) | −0.0017 (9) | −0.0013 (8) | 0.0029 (8) |
C13 | 0.0161 (9) | 0.0160 (10) | 0.0193 (10) | −0.0005 (8) | −0.0008 (8) | 0.0015 (8) |
C14 | 0.0152 (9) | 0.0145 (11) | 0.0207 (10) | 0.0007 (8) | 0.0010 (8) | 0.0009 (8) |
C15 | 0.0146 (9) | 0.0169 (10) | 0.0174 (10) | 0.0003 (8) | 0.0020 (8) | −0.0015 (8) |
C16 | 0.0265 (10) | 0.0186 (11) | 0.0141 (10) | −0.0010 (9) | 0.0004 (8) | 0.0002 (8) |
C17 | 0.0347 (12) | 0.0198 (11) | 0.0200 (11) | 0.0012 (9) | 0.0033 (9) | 0.0007 (9) |
C18 | 0.0197 (10) | 0.0173 (11) | 0.0173 (10) | 0.0019 (8) | 0.0009 (8) | 0.0048 (9) |
O1—C14 | 1.352 (2) | C3X—H3XA | 0.9300 |
O1—C16 | 1.452 (2) | C5—C6 | 1.392 (3) |
N1—C14 | 1.316 (2) | C5—C15 | 1.409 (3) |
N1—C7 | 1.359 (2) | C6—C7 | 1.387 (3) |
N2—C11 | 1.389 (2) | C6—H6A | 0.9300 |
N2—H1N2 | 0.92 (2) | C7—C8 | 1.469 (3) |
N2—H2N2 | 0.87 (2) | C8—C13 | 1.398 (3) |
N3—C18 | 1.152 (2) | C8—C9 | 1.403 (3) |
C4—C3X | 1.323 (14) | C9—C10 | 1.382 (3) |
C4—C3 | 1.364 (5) | C9—H9A | 0.9300 |
C4—C5 | 1.468 (3) | C10—C11 | 1.399 (3) |
C4—S1X | 1.638 (8) | C10—H10A | 0.9300 |
C4—S1 | 1.736 (2) | C11—C12 | 1.397 (3) |
S1—C1 | 1.717 (3) | C12—C13 | 1.378 (3) |
C1—C2 | 1.361 (4) | C12—H12A | 0.9300 |
C1—H1A | 0.9300 | C13—H13A | 0.9300 |
C2—C3 | 1.404 (6) | C14—C15 | 1.414 (3) |
C2—H2A | 0.9300 | C15—C18 | 1.434 (3) |
C3—H3A | 0.9300 | C16—C17 | 1.501 (3) |
S1X—C1X | 1.725 (17) | C16—H16A | 0.9700 |
C1X—C2X | 1.355 (16) | C16—H16B | 0.9700 |
C1X—H1XA | 0.9300 | C17—H17A | 0.9600 |
C2X—C3X | 1.427 (17) | C17—H17B | 0.9600 |
C2X—H2XA | 0.9300 | C17—H17C | 0.9600 |
C14—O1—C16 | 116.59 (14) | N1—C7—C8 | 116.73 (17) |
C14—N1—C7 | 117.34 (16) | C6—C7—C8 | 121.62 (17) |
C11—N2—H1N2 | 113.9 (15) | C13—C8—C9 | 117.52 (17) |
C11—N2—H2N2 | 116.0 (14) | C13—C8—C7 | 120.83 (17) |
H1N2—N2—H2N2 | 112 (2) | C9—C8—C7 | 121.63 (17) |
C3X—C4—C3 | 109.2 (9) | C10—C9—C8 | 121.11 (18) |
C3X—C4—C5 | 120.2 (8) | C10—C9—H9A | 119.4 |
C3—C4—C5 | 130.5 (3) | C8—C9—H9A | 119.4 |
C3X—C4—S1X | 116.3 (8) | C9—C10—C11 | 120.71 (18) |
C5—C4—S1X | 123.5 (3) | C9—C10—H10A | 119.6 |
C3—C4—S1 | 109.1 (2) | C11—C10—H10A | 119.6 |
C5—C4—S1 | 119.99 (14) | N2—C11—C12 | 120.63 (18) |
S1X—C4—S1 | 116.3 (3) | N2—C11—C10 | 120.94 (18) |
C1—S1—C4 | 92.13 (12) | C12—C11—C10 | 118.39 (17) |
C2—C1—S1 | 112.0 (3) | C13—C12—C11 | 120.61 (18) |
C2—C1—H1A | 124.0 | C13—C12—H12A | 119.7 |
S1—C1—H1A | 124.0 | C11—C12—H12A | 119.7 |
C1—C2—C3 | 111.5 (3) | C12—C13—C8 | 121.57 (18) |
C1—C2—H2A | 124.3 | C12—C13—H13A | 119.2 |
C3—C2—H2A | 124.3 | C8—C13—H13A | 119.2 |
C4—C3—C2 | 115.4 (4) | N1—C14—O1 | 119.39 (17) |
C4—C3—H3A | 122.3 | N1—C14—C15 | 124.92 (17) |
C2—C3—H3A | 122.3 | O1—C14—C15 | 115.69 (16) |
C4—S1X—C1X | 90.0 (8) | C5—C15—C14 | 117.90 (17) |
C2X—C1X—S1X | 111.9 (15) | C5—C15—C18 | 124.26 (17) |
C2X—C1X—H1XA | 124.1 | C14—C15—C18 | 117.83 (17) |
S1X—C1X—H1XA | 124.1 | O1—C16—C17 | 107.39 (15) |
C1X—C2X—C3X | 110.7 (16) | O1—C16—H16A | 110.2 |
C1X—C2X—H2XA | 124.6 | C17—C16—H16A | 110.2 |
C3X—C2X—H2XA | 124.6 | O1—C16—H16B | 110.2 |
C4—C3X—C2X | 110.6 (14) | C17—C16—H16B | 110.2 |
C4—C3X—H3XA | 124.7 | H16A—C16—H16B | 108.5 |
C2X—C3X—H3XA | 124.7 | C16—C17—H17A | 109.5 |
C6—C5—C15 | 116.48 (17) | C16—C17—H17B | 109.5 |
C6—C5—C4 | 119.64 (17) | H17A—C17—H17B | 109.5 |
C15—C5—C4 | 123.82 (17) | C16—C17—H17C | 109.5 |
C7—C6—C5 | 121.69 (18) | H17A—C17—H17C | 109.5 |
C7—C6—H6A | 119.2 | H17B—C17—H17C | 109.5 |
C5—C6—H6A | 119.2 | N3—C18—C15 | 177.8 (2) |
N1—C7—C6 | 121.64 (17) | ||
C3X—C4—S1—C1 | 93 (10) | C14—N1—C7—C6 | −1.5 (3) |
C3—C4—S1—C1 | 0.1 (3) | C14—N1—C7—C8 | 179.37 (16) |
C5—C4—S1—C1 | −172.59 (18) | C5—C6—C7—N1 | 1.4 (3) |
S1X—C4—S1—C1 | 1.6 (4) | C5—C6—C7—C8 | −179.56 (17) |
C4—S1—C1—C2 | −0.2 (3) | N1—C7—C8—C13 | 25.1 (3) |
S1—C1—C2—C3 | 0.2 (5) | C6—C7—C8—C13 | −154.02 (19) |
C3X—C4—C3—C2 | −5.3 (12) | N1—C7—C8—C9 | −156.59 (17) |
C5—C4—C3—C2 | 171.7 (3) | C6—C7—C8—C9 | 24.3 (3) |
S1X—C4—C3—C2 | −170 (5) | C13—C8—C9—C10 | 1.9 (3) |
S1—C4—C3—C2 | −0.1 (5) | C7—C8—C9—C10 | −176.49 (18) |
C1—C2—C3—C4 | −0.1 (7) | C8—C9—C10—C11 | 1.0 (3) |
C3X—C4—S1X—C1X | −3 (2) | C9—C10—C11—N2 | 174.78 (18) |
C3—C4—S1X—C1X | 14 (4) | C9—C10—C11—C12 | −2.9 (3) |
C5—C4—S1X—C1X | 176.6 (14) | N2—C11—C12—C13 | −175.82 (17) |
S1—C4—S1X—C1X | 2.6 (15) | C10—C11—C12—C13 | 1.8 (3) |
C4—S1X—C1X—C2X | −2 (3) | C11—C12—C13—C8 | 1.1 (3) |
S1X—C1X—C2X—C3X | 6 (4) | C9—C8—C13—C12 | −2.9 (3) |
C3—C4—C3X—C2X | 4 (2) | C7—C8—C13—C12 | 175.46 (17) |
C5—C4—C3X—C2X | −173.0 (13) | C7—N1—C14—O1 | −178.52 (15) |
S1X—C4—C3X—C2X | 6 (2) | C7—N1—C14—C15 | 1.5 (3) |
S1—C4—C3X—C2X | −85 (10) | C16—O1—C14—N1 | −1.0 (2) |
C1X—C2X—C3X—C4 | −8 (3) | C16—O1—C14—C15 | 179.01 (16) |
C3X—C4—C5—C6 | 26.4 (13) | C6—C5—C15—C14 | 0.9 (3) |
C3—C4—C5—C6 | −150.2 (4) | C4—C5—C15—C14 | −176.28 (17) |
S1X—C4—C5—C6 | −153.1 (5) | C6—C5—C15—C18 | −177.58 (17) |
S1—C4—C5—C6 | 20.7 (2) | C4—C5—C15—C18 | 5.2 (3) |
C3X—C4—C5—C15 | −156.5 (12) | N1—C14—C15—C5 | −1.2 (3) |
C3—C4—C5—C15 | 26.9 (4) | O1—C14—C15—C5 | 178.77 (16) |
S1X—C4—C5—C15 | 24.1 (5) | N1—C14—C15—C18 | 177.37 (17) |
S1—C4—C5—C15 | −162.13 (15) | O1—C14—C15—C18 | −2.6 (3) |
C15—C5—C6—C7 | −1.0 (3) | C14—O1—C16—C17 | 171.13 (16) |
C4—C5—C6—C7 | 176.29 (17) |
Cg1 is the centroid of the major disorder component of the thiophene ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H1N2···N3i | 0.92 (2) | 2.29 (2) | 3.197 (3) | 168.2 (19) |
C3—H3A···Cg1ii | 0.93 | 2.93 | 3.566 (6) | 127 |
C12—H12A···Cg1iii | 0.93 | 2.78 | 3.430 (3) | 128 |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) −x−1, y+1/2, −z+3/2; (iii) x−1/2, y, −z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C18H15N3OS |
Mr | 321.38 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 100 |
a, b, c (Å) | 7.0751 (12), 20.843 (4), 20.983 (4) |
V (Å3) | 3094.3 (9) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.22 |
Crystal size (mm) | 0.35 × 0.11 × 0.04 |
Data collection | |
Diffractometer | Bruker APEXII DUO CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.928, 0.992 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 34805, 3045, 2188 |
Rint | 0.092 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.085, 1.05 |
No. of reflections | 3045 |
No. of parameters | 233 |
No. of restraints | 88 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.21, −0.32 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg1 is the centroid of the major disorder component of the thiophene ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H1N2···N3i | 0.92 (2) | 2.29 (2) | 3.197 (3) | 168.2 (19) |
C3—H3A···Cg1ii | 0.93 | 2.93 | 3.566 (6) | 127 |
C12—H12A···Cg1iii | 0.93 | 2.78 | 3.430 (3) | 128 |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) −x−1, y+1/2, −z+3/2; (iii) x−1/2, y, −z−1/2. |
Acknowledgements
The authors thank the Thailand Research Fund (TRF) and Prince of Songkla University for a research grant. AMI is grateful to the Head of the Department of Chemistry and the Director, NITK-Surathkal, India, for providing research facilities. The authors also thank Universiti Sains Malaysia for the Research University Golden Goose grant No. 1001/PFIZIK/811012.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Heterocyclic compounds containing the pyridine ring are reported to possess a diverse range of biological activities such as antimicrobial, antitumor and anti-inflammatory (Amr & Abdulla, 2006; Borgna et al., 1993; Goda et al., 2004; Kamal et al., 2007; Malinka et al., 1998) properties. Our research is aimed at the synthesis and preliminary biological (in vitro) and pharmacological (in vivo) screening, together with enzyme inhibitory activity, of the nicotinonitrile derivatives. The title compound, which is a substituted pyridine compound, was synthesized by cyclization of our previous chalcone derivative (Fun et al., 2009) and malononitrile.
The molecule of the title compound, C18H15N3OS, is not planar (Fig. 1). The central pyridyl ring is inclined to the 4-aminophenyl and thiophene rings with dihedral angles of 25.22 (10)° and 24.80 (16)°, respectively. The thiophene ring is disordered over two orientations by rotation around the C4—C5 bond, with occupancies of 0.858 (2) and 0.142 (1). The ethoxy group is twisted slightly from the attached pyridyl ring, as indicated by the torsion angles C14—O1—C16—C17 = 171.13 (16)° and C16—O1—C14—C15 = 179.01 (16) °. The bond distances agree with the literature values (Allen et al., 1987) and are comparable with those for related structures (Chantrapromma et al., 2009; 2010).
In the crystal structure, (Fig. 2), the molecules are linked by weak intermolecular N2—H1N2···N3 hydrogen bond (Table 1) into chains along [010]. These chains are stacked along the a axis. The crystal structure is further stabilized by C—H···π interactions (Table 1); Cg1 is the centroid of the C1–C4/S1 ring (major disorder component).