organic compounds
(Z)-2-(1,3-Thiazolidin-2-ylidene)cyanamide
aCollege of Chemistry and Molecular Engineering, Qingdao University of Science and Technology, Qingdao 266042, People's Republic of China
*Correspondence e-mail: qknhs@yahoo.com.cn
In the title compound, C4H5N3S, the tdihydrothiazole ring is almost planar, the maximum and minimum deviations being 0.188 (2) Å and 0.042 (3) Å, respectively. The involves intermolecular N—H⋯N hydrogen bonds.
Related literature
The title compound was synthesized as an intermediate for the synthesis of nicotine insecticides. For their biological activity and synthetic information, see: Jeschke et al. (2002); Hense et al. (2002). For a related structure, see: Dupont et al. (1995). For typical triple-bond lengths, see: Allen et al. (1987)
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S160053681002917X/bv2145sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S160053681002917X/bv2145Isup2.hkl
Cyano-dimethyl dithiocarbamate 14.6 g (0.1 mol) was dissolved in 35 ml ethanol with stirrer and 2-amino-ethanethiol 11.4 g (0.1 mol) was slowly added to the mixture while maintaining the temperature at 303–313 K. After three hours, ethanol was removed under reduced pressure to give title compounds 11.2 g, yield 88%. (Jeschke, et al.,2002). Single crystals suitable for X-ray measurement were obtained by recrystallization from the mixture of acetone and methanol at room temperature.
All H atoms were placed in calculated positions, with C—H = 0.97 Å and N—H = 0.86 Å, and included in the final cycles of
using a riding model, with Uiso(H) = 1.2Ueq(C, N).Many nicotine insecticide derivatives have been reported showing various biological activities, e.g. thiacloprid (Jeschke et al., 2002). The title compound (I) was synthesized as an intermediate for the synthesis of nicotine insecticides (Hense et al., 2002). As an important intermediate for the syntesis of insecticides, we report here the
of (I).In (I) (Fig. 1), main bond (C—C,C—N,S—C) lengths are normal and in a good agreement with those reported previously (Dupont et al., 1995). Torsion angles of the thiazole ring are small [C4—N2—C3—S1, 6.52 (3)°, C1—S1—C3—N1, 9.95 (2)° and C2—N1—C3—S1, 7.98 (3)°] and thiazole ring is almost planar as the maximum and minimum deviations are 0.188Å and 0.042Å respectively. In the thiazole ring, the dihedral angle between plane A (C1/C2/C3/C4) and plane B (S1/N1/N2/C3) is 5.5 (3)°. The molecule contains a nitrile group, with an C≡N distance of 1.158 (1) Å, which indicates substantial triple bond character (Allen et al., 1987). Recently, compounds containing the thiazolidin-2-yl-cyanamide group have attracted much interest because compounds containing a thiazole ring system are well known as efficient insecticides (Hense, et al., 2002). The structure is stabilized by hydrogen bonds of N—H···N type.
The title compound was synthesized as an intermediate for the synthesis of nicotine insecticides. For their biological activity and synthetic information, see: Jeschke et al. (2002); Hense et al. (2002). For a related structure, see: Dupont et al. (1995). For typical triple-bond lengths, see: Allen et al. (1987)
Data collection: CrystalClear (Rigaku, 2005); cell
CrystalClear (Rigaku, 2005); data reduction: CrystalClear (Rigaku, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. View of the title compound (I), with displacement ellipsoids drawn at the 40% probability level. |
C4H5N3S | Z = 2 |
Mr = 127.18 | F(000) = 130 |
Triclinic, P1 | Dx = 1.495 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.4556 (13) Å | Cell parameters from 916 reflections |
b = 6.5584 (13) Å | θ = 3.1–27.4° |
c = 6.7910 (14) Å | µ = 0.46 mm−1 |
α = 83.28 (3)° | T = 113 K |
β = 81.53 (3)° | Prism, colorless |
γ = 82.12 (3)° | 0.24 × 0.18 × 0.04 mm |
V = 280.32 (10) Å3 |
Rigaku Saturn diffractometer | 968 independent reflections |
Radiation source: rotating anode | 865 reflections with I > 2σ(I) |
Confocal monochromator | Rint = 0.039 |
ω scans | θmax = 25.0°, θmin = 3.1° |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | h = −6→7 |
Tmin = 0.898, Tmax = 0.982 | k = −7→6 |
1570 measured reflections | l = −8→7 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.102 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0574P)2] where P = (Fo2 + 2Fc2)/3 |
968 reflections | (Δ/σ)max < 0.001 |
73 parameters | Δρmax = 0.38 e Å−3 |
0 restraints | Δρmin = −0.37 e Å−3 |
C4H5N3S | γ = 82.12 (3)° |
Mr = 127.18 | V = 280.32 (10) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.4556 (13) Å | Mo Kα radiation |
b = 6.5584 (13) Å | µ = 0.46 mm−1 |
c = 6.7910 (14) Å | T = 113 K |
α = 83.28 (3)° | 0.24 × 0.18 × 0.04 mm |
β = 81.53 (3)° |
Rigaku Saturn diffractometer | 968 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | 865 reflections with I > 2σ(I) |
Tmin = 0.898, Tmax = 0.982 | Rint = 0.039 |
1570 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.102 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.38 e Å−3 |
968 reflections | Δρmin = −0.37 e Å−3 |
73 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.19920 (8) | 0.40549 (8) | 0.26592 (8) | 0.0167 (3) | |
N1 | 0.4033 (3) | 0.7184 (3) | 0.2385 (3) | 0.0161 (4) | |
H1C | 0.5069 | 0.7914 | 0.2164 | 0.019* | |
N2 | 0.6225 (3) | 0.4094 (3) | 0.2613 (3) | 0.0158 (5) | |
N3 | 0.6775 (3) | 0.0290 (3) | 0.2589 (3) | 0.0234 (5) | |
C1 | 0.0574 (4) | 0.6574 (3) | 0.2008 (4) | 0.0184 (5) | |
H1A | 0.0483 | 0.6789 | 0.0584 | 0.022* | |
H1B | −0.0843 | 0.6700 | 0.2732 | 0.022* | |
C2 | 0.1853 (4) | 0.8129 (3) | 0.2610 (4) | 0.0187 (5) | |
H2A | 0.1700 | 0.9417 | 0.1752 | 0.022* | |
H2B | 0.1384 | 0.8415 | 0.3985 | 0.022* | |
C3 | 0.4340 (4) | 0.5138 (3) | 0.2539 (3) | 0.0139 (5) | |
C4 | 0.6407 (3) | 0.2063 (3) | 0.2601 (3) | 0.0166 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0153 (4) | 0.0143 (4) | 0.0224 (4) | −0.0053 (2) | −0.0049 (2) | −0.0020 (2) |
N1 | 0.0159 (10) | 0.0126 (10) | 0.0221 (11) | −0.0057 (7) | −0.0056 (8) | −0.0021 (7) |
N2 | 0.0160 (10) | 0.0118 (10) | 0.0211 (11) | −0.0035 (7) | −0.0050 (8) | −0.0022 (7) |
N3 | 0.0211 (11) | 0.0139 (11) | 0.0358 (13) | −0.0013 (8) | −0.0083 (9) | −0.0013 (8) |
C1 | 0.0154 (11) | 0.0183 (12) | 0.0227 (13) | −0.0004 (9) | −0.0065 (9) | −0.0034 (9) |
C2 | 0.0200 (12) | 0.0145 (12) | 0.0221 (13) | −0.0003 (9) | −0.0050 (9) | −0.0039 (9) |
C3 | 0.0192 (11) | 0.0144 (11) | 0.0096 (11) | −0.0054 (9) | −0.0031 (9) | −0.0018 (8) |
C4 | 0.0126 (11) | 0.0220 (13) | 0.0166 (12) | −0.0041 (9) | −0.0053 (9) | −0.0008 (9) |
S1—C3 | 1.747 (2) | N3—C4 | 1.155 (3) |
S1—C1 | 1.816 (2) | C1—C2 | 1.522 (3) |
N1—C3 | 1.323 (3) | C1—H1A | 0.9700 |
N1—C2 | 1.452 (3) | C1—H1B | 0.9700 |
N1—H1C | 0.8600 | C2—H2A | 0.9700 |
N2—C3 | 1.317 (3) | C2—H2B | 0.9700 |
N2—C4 | 1.321 (3) | ||
C3—S1—C1 | 91.15 (10) | N1—C2—C1 | 106.10 (17) |
C3—N1—C2 | 116.32 (19) | N1—C2—H2A | 110.5 |
C3—N1—H1C | 121.8 | C1—C2—H2A | 110.5 |
C2—N1—H1C | 121.8 | N1—C2—H2B | 110.5 |
C3—N2—C4 | 117.9 (2) | C1—C2—H2B | 110.5 |
C2—C1—S1 | 105.21 (16) | H2A—C2—H2B | 108.7 |
C2—C1—H1A | 110.7 | N2—C3—N1 | 122.1 (2) |
S1—C1—H1A | 110.7 | N2—C3—S1 | 125.53 (17) |
C2—C1—H1B | 110.7 | N1—C3—S1 | 112.34 (17) |
S1—C1—H1B | 110.7 | N3—C4—N2 | 173.3 (2) |
H1A—C1—H1B | 108.8 | ||
C3—S1—C1—C2 | −23.42 (16) | C2—N1—C3—N2 | −171.4 (2) |
C3—N1—C2—C1 | −25.8 (3) | C2—N1—C3—S1 | 7.9 (2) |
S1—C1—C2—N1 | 30.4 (2) | C1—S1—C3—N2 | −170.6 (2) |
C4—N2—C3—N1 | −174.6 (2) | C1—S1—C3—N1 | 10.19 (17) |
C4—N2—C3—S1 | 6.3 (3) | C3—N2—C4—N3 | 177 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1C···N3i | 0.86 | 2.10 | 2.903 (3) | 156 |
Symmetry code: (i) x, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | C4H5N3S |
Mr | 127.18 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 113 |
a, b, c (Å) | 6.4556 (13), 6.5584 (13), 6.7910 (14) |
α, β, γ (°) | 83.28 (3), 81.53 (3), 82.12 (3) |
V (Å3) | 280.32 (10) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.46 |
Crystal size (mm) | 0.24 × 0.18 × 0.04 |
Data collection | |
Diffractometer | Rigaku Saturn |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2005) |
Tmin, Tmax | 0.898, 0.982 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 1570, 968, 865 |
Rint | 0.039 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.102, 1.06 |
No. of reflections | 968 |
No. of parameters | 73 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.38, −0.37 |
Computer programs: CrystalClear (Rigaku, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1C···N3i | 0.86 | 2.10 | 2.903 (3) | 156.0 |
Symmetry code: (i) x, y+1, z. |
References
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19. CSD CrossRef Web of Science Google Scholar
Dupont, L., Masereel, B., Lambert, D. & Scriba, G. (1995). Acta Cryst. C51, 1901–1903. CSD CrossRef CAS Web of Science IUCr Journals Google Scholar
Hense, A., Fischer. Gesing, E. R. (2002). WO Patent 2002096872. Google Scholar
Jeschke, P., Beck, M. E. & Kraemer, W. (2002). DE Patent 10119423. Google Scholar
Rigaku (2005). CrystalClear. Rigaku Corporation, Tokyo, Japan. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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Many nicotine insecticide derivatives have been reported showing various biological activities, e.g. thiacloprid (Jeschke et al., 2002). The title compound (I) was synthesized as an intermediate for the synthesis of nicotine insecticides (Hense et al., 2002). As an important intermediate for the syntesis of insecticides, we report here the crystal structure of (I).
In (I) (Fig. 1), main bond (C—C,C—N,S—C) lengths are normal and in a good agreement with those reported previously (Dupont et al., 1995). Torsion angles of the thiazole ring are small [C4—N2—C3—S1, 6.52 (3)°, C1—S1—C3—N1, 9.95 (2)° and C2—N1—C3—S1, 7.98 (3)°] and thiazole ring is almost planar as the maximum and minimum deviations are 0.188Å and 0.042Å respectively. In the thiazole ring, the dihedral angle between plane A (C1/C2/C3/C4) and plane B (S1/N1/N2/C3) is 5.5 (3)°. The molecule contains a nitrile group, with an C≡N distance of 1.158 (1) Å, which indicates substantial triple bond character (Allen et al., 1987). Recently, compounds containing the thiazolidin-2-yl-cyanamide group have attracted much interest because compounds containing a thiazole ring system are well known as efficient insecticides (Hense, et al., 2002). The structure is stabilized by hydrogen bonds of N—H···N type.