organic compounds
5,8-Dibromo-14,17-difluoro-2,11-dithia[3.3]paracyclophane
aKey Laboratory of Pesticides and Chemical Biology of the Ministry of Education, College of Chemistry, Central China Normal University, Wuhan 430079, People's Republic of China
*Correspondence e-mail: haoxiaowei1985@163.com
The title compound, C16H12Br2F2S2 [systematic name: 12,15-dibromo-52,55-difluoro-2,7-dithia-1,5(1,4)-dibenzenaoctaphane], has two approximately parallel benzene rings with a dihedral angle of 1.53 (15)° between them and with a centroid–centroid distance of 3.3066 (18) Å. In the molecules are stacked along the a axis through an intermolecular π–π interaction with a centroid–centroid distance of 3.7803 (18) Å. Molecules are also connected by a C—H⋯S interaction, forming a chain along the b axis.
Related literature
For the preparation of the title compound, see: Wang et al. (2006); Xu et al. (2008). For potential applications of intramolecular π–π interactions in organic reactions, see: Korenaga et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1997); cell SAINT (Bruker, 1999); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536810028904/is2571sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810028904/is2571Isup2.hkl
The title compound was prepared according to the method reported previously (Wang et al., 2006; Xu et al., 2008). A solution with equimolar amounts of (2,5-difluoro-1,4-phenylene)dimethanethiol and 1,4-dibromo-2,5-bis(bromomethyl)benzene in degassed THF (500 ml) was added dropwised under N2 over 12 h to a refluxing solution of potassium carbonate (5equiv) in EtOH (1.2L). After an additional 2 h at the reflux temperature 363 K, the mixture was cooled and the solvent were removed. The resulting residue was treated with CH2Cl2 (300 ml) and water (300 ml). The organic phase was separated, the aqueous extracted with CH2Cl2 three times. The combined organic layers was dried over Na2SO4, Then solvent was removed, and the resulting solid was chromatographed on silica gel using CH2Cl2/petroleum ether (1:1, v/v) as
The product was further purified by recrystallization from toluene.All H atoms were initially located in a difference map, and then were constrained to an idealized geometry (C—H = 0.93 or 0.97 Å). The isotropic displacement parameters were set to Uiso(H) = 1.2Ueq(C).
The aromatic-aromatic π–π interaction is an important phenomena in organic reactions (Korenaga et al., 2007). The structural and electronic properties of these derivatives result from the characteristic interactions between the two π-electron systems. Substituents in the benzene rings can significantly effect the π–π interaction. In the compound [3,3]paracyclophane, we explored the intramolecular π–π interaction between the two benzene rings. In the intermolecular π–π and non-classical hydrogen bonding interactions link the molecule, in which they seem to be effective in the stabilization of the structure.
For the preparation of the title compound, see: Wang et al. (2006); Xu et al. (2008). For potential applications of intramolecular π–π interactions in organic reactions, see: Korenaga et al. (2007).
Data collection: SMART (Bruker, 1997); cell
SAINT (Bruker, 1999); data reduction: SAINT (Bruker, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. View of the molecule of (I) showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are represented by spheres of arbitrary radius. |
C16H12Br2F2S2 | Z = 2 |
Mr = 466.20 | F(000) = 456 |
Triclinic, P1 | Dx = 1.948 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.9744 (5) Å | Cell parameters from 2764 reflections |
b = 9.6798 (7) Å | θ = 2.4–28.2° |
c = 12.9376 (9) Å | µ = 5.38 mm−1 |
α = 72.301 (1)° | T = 298 K |
β = 75.764 (1)° | Block, colorless |
γ = 76.535 (1)° | 0.16 × 0.12 × 0.10 mm |
V = 794.63 (10) Å3 |
Bruker SMART APEX diffractometer | 2920 independent reflections |
Radiation source: fine-focus sealed tube | 2493 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
φ and ω scans | θmax = 25.5°, θmin = 3.1° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −8→8 |
Tmin = 0.480, Tmax = 0.616 | k = −11→11 |
4952 measured reflections | l = −13→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.036 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.096 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0636P)2] where P = (Fo2 + 2Fc2)/3 |
2920 reflections | (Δ/σ)max < 0.001 |
199 parameters | Δρmax = 0.58 e Å−3 |
0 restraints | Δρmin = −0.85 e Å−3 |
C16H12Br2F2S2 | γ = 76.535 (1)° |
Mr = 466.20 | V = 794.63 (10) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.9744 (5) Å | Mo Kα radiation |
b = 9.6798 (7) Å | µ = 5.38 mm−1 |
c = 12.9376 (9) Å | T = 298 K |
α = 72.301 (1)° | 0.16 × 0.12 × 0.10 mm |
β = 75.764 (1)° |
Bruker SMART APEX diffractometer | 2920 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2493 reflections with I > 2σ(I) |
Tmin = 0.480, Tmax = 0.616 | Rint = 0.030 |
4952 measured reflections |
R[F2 > 2σ(F2)] = 0.036 | 0 restraints |
wR(F2) = 0.096 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.58 e Å−3 |
2920 reflections | Δρmin = −0.85 e Å−3 |
199 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | 0.27806 (5) | 0.76264 (4) | 0.51530 (3) | 0.04905 (14) | |
Br2 | 0.44765 (5) | 0.76124 (4) | −0.00392 (3) | 0.04945 (14) | |
C1 | 0.4459 (4) | 0.6243 (3) | 0.2275 (3) | 0.0328 (6) | |
C2 | 0.3888 (4) | 0.7531 (3) | 0.1493 (2) | 0.0337 (6) | |
C3 | 0.2827 (4) | 0.8783 (3) | 0.1795 (3) | 0.0340 (6) | |
H3 | 0.2432 | 0.9614 | 0.1252 | 0.041* | |
C4 | 0.2339 (4) | 0.8832 (3) | 0.2883 (3) | 0.0336 (6) | |
C5 | 0.3120 (4) | 0.7600 (3) | 0.3655 (2) | 0.0330 (6) | |
C6 | 0.4130 (4) | 0.6327 (3) | 0.3353 (3) | 0.0356 (6) | |
H6 | 0.4597 | 0.5513 | 0.3887 | 0.043* | |
C7 | 0.5314 (4) | 0.4785 (3) | 0.2002 (3) | 0.0395 (7) | |
H7A | 0.6509 | 0.4346 | 0.2319 | 0.047* | |
H7B | 0.5709 | 0.4956 | 0.1206 | 0.047* | |
C8 | 0.1518 (5) | 0.4395 (3) | 0.1753 (3) | 0.0472 (8) | |
H8A | 0.2100 | 0.4717 | 0.0976 | 0.057* | |
H8B | 0.0700 | 0.3672 | 0.1829 | 0.057* | |
C9 | 0.0172 (4) | 0.5697 (3) | 0.2108 (3) | 0.0365 (7) | |
C10 | −0.0598 (4) | 0.6907 (3) | 0.1333 (3) | 0.0387 (7) | |
C11 | −0.1606 (4) | 0.8195 (3) | 0.1582 (3) | 0.0424 (7) | |
H11 | −0.2073 | 0.8984 | 0.1030 | 0.051* | |
C12 | −0.1935 (4) | 0.8330 (3) | 0.2650 (3) | 0.0384 (7) | |
C13 | −0.1325 (4) | 0.7082 (3) | 0.3432 (3) | 0.0381 (7) | |
C14 | −0.0278 (4) | 0.5803 (3) | 0.3187 (3) | 0.0379 (7) | |
H14 | 0.0134 | 0.5003 | 0.3748 | 0.045* | |
C15 | −0.2780 (4) | 0.9789 (3) | 0.2925 (3) | 0.0480 (8) | |
H15A | −0.3191 | 0.9615 | 0.3721 | 0.058* | |
H15B | −0.3965 | 1.0238 | 0.2601 | 0.058* | |
C16 | 0.0952 (4) | 1.0135 (3) | 0.3234 (3) | 0.0425 (7) | |
H16A | 0.1759 | 1.0849 | 0.3192 | 0.051* | |
H16B | 0.0319 | 0.9801 | 0.4001 | 0.051* | |
F1 | −0.0293 (3) | 0.6816 (2) | 0.02783 (17) | 0.0624 (5) | |
F2 | −0.1649 (3) | 0.7156 (2) | 0.45008 (16) | 0.0599 (5) | |
S1 | 0.35458 (12) | 0.34989 (8) | 0.25145 (7) | 0.0429 (2) | |
S2 | −0.10017 (11) | 1.10582 (8) | 0.24325 (7) | 0.0417 (2) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.0641 (2) | 0.0407 (2) | 0.0429 (2) | 0.00474 (15) | −0.01841 (16) | −0.01540 (16) |
Br2 | 0.0578 (2) | 0.0461 (2) | 0.0390 (2) | −0.00154 (16) | −0.00537 (15) | −0.01191 (16) |
C1 | 0.0266 (12) | 0.0259 (14) | 0.0458 (17) | −0.0033 (11) | −0.0048 (12) | −0.0118 (13) |
C2 | 0.0292 (13) | 0.0319 (15) | 0.0397 (16) | −0.0034 (11) | −0.0065 (12) | −0.0103 (13) |
C3 | 0.0315 (13) | 0.0252 (14) | 0.0429 (17) | −0.0033 (11) | −0.0101 (12) | −0.0042 (12) |
C4 | 0.0325 (14) | 0.0243 (14) | 0.0469 (18) | −0.0043 (11) | −0.0095 (12) | −0.0126 (13) |
C5 | 0.0317 (13) | 0.0273 (14) | 0.0414 (16) | −0.0029 (11) | −0.0097 (12) | −0.0102 (12) |
C6 | 0.0328 (14) | 0.0272 (14) | 0.0446 (17) | −0.0003 (11) | −0.0121 (13) | −0.0057 (13) |
C7 | 0.0400 (15) | 0.0286 (15) | 0.0489 (19) | 0.0008 (12) | −0.0068 (13) | −0.0150 (14) |
C8 | 0.0494 (17) | 0.0327 (16) | 0.068 (2) | −0.0054 (13) | −0.0184 (16) | −0.0204 (16) |
C9 | 0.0301 (13) | 0.0265 (14) | 0.0548 (19) | −0.0065 (11) | −0.0095 (13) | −0.0109 (14) |
C10 | 0.0397 (15) | 0.0361 (16) | 0.0444 (17) | −0.0093 (12) | −0.0147 (13) | −0.0088 (14) |
C11 | 0.0395 (15) | 0.0320 (16) | 0.054 (2) | −0.0047 (12) | −0.0178 (14) | −0.0022 (14) |
C12 | 0.0303 (14) | 0.0279 (15) | 0.056 (2) | −0.0035 (11) | −0.0084 (13) | −0.0111 (14) |
C13 | 0.0315 (14) | 0.0377 (17) | 0.0425 (18) | −0.0071 (12) | −0.0019 (12) | −0.0098 (14) |
C14 | 0.0368 (14) | 0.0278 (14) | 0.0455 (18) | −0.0053 (11) | −0.0101 (13) | −0.0027 (13) |
C15 | 0.0383 (15) | 0.0348 (17) | 0.066 (2) | 0.0012 (13) | −0.0058 (15) | −0.0156 (16) |
C16 | 0.0467 (16) | 0.0278 (15) | 0.057 (2) | 0.0058 (13) | −0.0182 (15) | −0.0190 (14) |
F1 | 0.0784 (13) | 0.0609 (13) | 0.0542 (13) | −0.0022 (10) | −0.0265 (11) | −0.0201 (10) |
F2 | 0.0644 (12) | 0.0585 (12) | 0.0459 (12) | 0.0036 (10) | −0.0028 (9) | −0.0146 (10) |
S1 | 0.0498 (4) | 0.0213 (4) | 0.0546 (5) | −0.0002 (3) | −0.0115 (4) | −0.0086 (3) |
S2 | 0.0464 (4) | 0.0214 (4) | 0.0543 (5) | 0.0031 (3) | −0.0157 (4) | −0.0075 (3) |
Br1—C5 | 1.901 (3) | C8—H8B | 0.9700 |
Br2—C2 | 1.904 (3) | C9—C14 | 1.384 (4) |
C1—C6 | 1.381 (4) | C9—C10 | 1.388 (4) |
C1—C2 | 1.391 (4) | C10—F1 | 1.355 (4) |
C1—C7 | 1.510 (4) | C10—C11 | 1.370 (4) |
C2—C3 | 1.377 (4) | C11—C12 | 1.386 (4) |
C3—C4 | 1.377 (4) | C11—H11 | 0.9300 |
C3—H3 | 0.9300 | C12—C13 | 1.376 (4) |
C4—C5 | 1.399 (4) | C12—C15 | 1.511 (4) |
C4—C16 | 1.516 (4) | C13—F2 | 1.367 (3) |
C5—C6 | 1.386 (4) | C13—C14 | 1.367 (4) |
C6—H6 | 0.9300 | C14—H14 | 0.9300 |
C7—S1 | 1.823 (3) | C15—S2 | 1.817 (3) |
C7—H7A | 0.9700 | C15—H15A | 0.9700 |
C7—H7B | 0.9700 | C15—H15B | 0.9700 |
C8—C9 | 1.507 (4) | C16—S2 | 1.815 (3) |
C8—S1 | 1.822 (3) | C16—H16A | 0.9700 |
C8—H8A | 0.9700 | C16—H16B | 0.9700 |
C6—C1—C2 | 116.9 (3) | C14—C9—C8 | 123.2 (3) |
C6—C1—C7 | 119.9 (3) | C10—C9—C8 | 120.3 (3) |
C2—C1—C7 | 123.1 (3) | F1—C10—C11 | 118.9 (3) |
C3—C2—C1 | 121.6 (3) | F1—C10—C9 | 118.2 (3) |
C3—C2—Br2 | 117.3 (2) | C11—C10—C9 | 122.9 (3) |
C1—C2—Br2 | 121.1 (2) | C10—C11—C12 | 120.4 (3) |
C4—C3—C2 | 121.5 (3) | C10—C11—H11 | 119.8 |
C4—C3—H3 | 119.3 | C12—C11—H11 | 119.8 |
C2—C3—H3 | 119.3 | C13—C12—C11 | 116.2 (3) |
C3—C4—C5 | 117.0 (3) | C13—C12—C15 | 121.9 (3) |
C3—C4—C16 | 121.5 (3) | C11—C12—C15 | 121.8 (3) |
C5—C4—C16 | 121.5 (3) | F2—C13—C14 | 118.0 (3) |
C6—C5—C4 | 121.0 (3) | F2—C13—C12 | 118.2 (3) |
C6—C5—Br1 | 118.4 (2) | C14—C13—C12 | 123.6 (3) |
C4—C5—Br1 | 120.6 (2) | C13—C14—C9 | 120.2 (3) |
C1—C6—C5 | 121.3 (3) | C13—C14—H14 | 119.9 |
C1—C6—H6 | 119.3 | C9—C14—H14 | 119.9 |
C5—C6—H6 | 119.3 | C12—C15—S2 | 113.1 (2) |
C1—C7—S1 | 112.95 (19) | C12—C15—H15A | 109.0 |
C1—C7—H7A | 109.0 | S2—C15—H15A | 109.0 |
S1—C7—H7A | 109.0 | C12—C15—H15B | 109.0 |
C1—C7—H7B | 109.0 | S2—C15—H15B | 109.0 |
S1—C7—H7B | 109.0 | H15A—C15—H15B | 107.8 |
H7A—C7—H7B | 107.8 | C4—C16—S2 | 115.7 (2) |
C9—C8—S1 | 115.3 (2) | C4—C16—H16A | 108.4 |
C9—C8—H8A | 108.4 | S2—C16—H16A | 108.4 |
S1—C8—H8A | 108.4 | C4—C16—H16B | 108.4 |
C9—C8—H8B | 108.4 | S2—C16—H16B | 108.4 |
S1—C8—H8B | 108.4 | H16A—C16—H16B | 107.4 |
H8A—C8—H8B | 107.5 | C8—S1—C7 | 103.73 (14) |
C14—C9—C10 | 116.3 (3) | C16—S2—C15 | 102.73 (15) |
C6—C1—C2—C3 | −7.7 (4) | C14—C9—C10—C11 | 5.4 (4) |
C7—C1—C2—C3 | 169.6 (2) | C8—C9—C10—C11 | −171.2 (3) |
C6—C1—C2—Br2 | 174.25 (19) | F1—C10—C11—C12 | −179.6 (3) |
C7—C1—C2—Br2 | −8.5 (4) | C9—C10—C11—C12 | −1.2 (4) |
C1—C2—C3—C4 | 2.1 (4) | C10—C11—C12—C13 | −4.5 (4) |
Br2—C2—C3—C4 | −179.7 (2) | C10—C11—C12—C15 | 171.4 (3) |
C2—C3—C4—C5 | 5.5 (4) | C11—C12—C13—F2 | −178.9 (3) |
C2—C3—C4—C16 | −172.1 (2) | C15—C12—C13—F2 | 5.2 (4) |
C3—C4—C5—C6 | −7.6 (4) | C11—C12—C13—C14 | 6.2 (4) |
C16—C4—C5—C6 | 170.1 (2) | C15—C12—C13—C14 | −169.7 (3) |
C3—C4—C5—Br1 | 173.4 (2) | F2—C13—C14—C9 | −177.0 (3) |
C16—C4—C5—Br1 | −9.0 (4) | C12—C13—C14—C9 | −2.1 (4) |
C2—C1—C6—C5 | 5.5 (4) | C10—C9—C14—C13 | −3.7 (4) |
C7—C1—C6—C5 | −171.8 (2) | C8—C9—C14—C13 | 172.7 (3) |
C4—C5—C6—C1 | 2.1 (4) | C13—C12—C15—S2 | 103.6 (3) |
Br1—C5—C6—C1 | −178.9 (2) | C11—C12—C15—S2 | −72.1 (3) |
C6—C1—C7—S1 | 70.6 (3) | C3—C4—C16—S2 | 32.3 (4) |
C2—C1—C7—S1 | −106.6 (3) | C5—C4—C16—S2 | −145.2 (2) |
S1—C8—C9—C14 | −32.7 (4) | C9—C8—S1—C7 | −73.4 (3) |
S1—C8—C9—C10 | 143.6 (2) | C1—C7—S1—C8 | 64.0 (3) |
C14—C9—C10—F1 | −176.2 (2) | C4—C16—S2—C15 | 75.0 (3) |
C8—C9—C10—F1 | 7.2 (4) | C12—C15—S2—C16 | −64.9 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8B···S2i | 0.97 | 2.86 | 3.801 (3) | 165 |
Symmetry code: (i) x, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | C16H12Br2F2S2 |
Mr | 466.20 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 6.9744 (5), 9.6798 (7), 12.9376 (9) |
α, β, γ (°) | 72.301 (1), 75.764 (1), 76.535 (1) |
V (Å3) | 794.63 (10) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 5.38 |
Crystal size (mm) | 0.16 × 0.12 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART APEX |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.480, 0.616 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4952, 2920, 2493 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.036, 0.096, 1.02 |
No. of reflections | 2920 |
No. of parameters | 199 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.58, −0.85 |
Computer programs: SMART (Bruker, 1997), SAINT (Bruker, 1999), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8B···S2i | 0.97 | 2.86 | 3.801 (3) | 165 |
Symmetry code: (i) x, y−1, z. |
Acknowledgements
The work was supported by the Key Laboratory of Pesticides and Chemical Biology of the Ministry of Education, College of Chemistry, Central China Normal University. The authors thank Mr Dongdong Dai for synthesizing the title compound, Mr Ziyong Li for solving and refining the structure, and Mr Xianggao Meng for helping with the data collection.
References
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The aromatic-aromatic π–π interaction is an important phenomena in organic reactions (Korenaga et al., 2007). The structural and electronic properties of these derivatives result from the characteristic interactions between the two π-electron systems. Substituents in the benzene rings can significantly effect the π–π interaction. In the compound [3,3]paracyclophane, we explored the intramolecular π–π interaction between the two benzene rings. In the crystal structure, intermolecular π–π and non-classical hydrogen bonding interactions link the molecule, in which they seem to be effective in the stabilization of the structure.