metal-organic compounds
Diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato-κ2N3,O4)nickel(II) tetrahydrate
aCollege of Science, Guang Dong Ocean University, Zhanjiang 524088, People's Republic of China, and bCollege of Food Science and Technology, Guang Dong Ocean University, Zhanjiang 524088, People's Republic of China
*Correspondence e-mail: songwd60@126.com
In the title complex, [Ni(C8H9N2O4)2(H2O)2]·4H2O, the NiII ion is coordinated in a slightly distorted octahedral environment formed by two bis-chelating H2pimda (H3pimda is 2-propyl-1H-4,5-dicarboxylic acid) ligands and two coordinated water molecules. In the a three-dimensional framework is formed by intermolecular O—H⋯O and N—H⋯O hydrogen bonds involving the solvent water molecules, coordinated water molecules, carboxylate O atoms and the protonated N atoms of the H2pimda ligands. The propyl groups of each H2pimda ligand are disordered over two sets of sites with refined occupancies of 0.50 (2):0.50 (2) and 0.762 (11):0.238 (11). In one water solvent molecule, one of the H atoms was refined as disordered over two sites of equal occupancy.
Related literature
For the potential uses and diverse structural types of imidazole-4,5-dicarboxylic acid complexes, see: Zou et al. (2006); Li et al. (2006); Liu et al. (2004); Sun et al. (2005).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
Supporting information
https://doi.org/10.1107/S1600536810025237/lh5048sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810025237/lh5048Isup2.hkl
A mixture of NiNO3 (0.5 mmol, 0.06 g) and 2-propyl-1H-imidazole-4,5-dicarboxylic acid (0.5 mmol, 0.99 g) in 15 ml of C3H7NO solution was sealed in an autoclave equipped with a Teflon liner (20 ml) and then heated at 433k for 4 days. Crystals of the title compound were obtained by slow evaporation of the solvent at room temperature.
C and N bound H atoms were placed in calculated positions and were treated as riding on the parent C or N atoms with C—H = 0.96-0.97 Å, N—H = 0.86 Å, and with Uiso(H) = 1.2 Ueq(C, N) or 1.5 Ueq(Cmethyl). H atoms of the water molecules were located in a difference Fourier map and were allowed to ride on the parent atom, with O-H = 0.85 Å and Uiso(H)=1.2 Ueq.
Recently, imidazole-4,5-dicarboxylic acid (H3IDC) with two nitrogen and four oxygen atoms has drawn great interest in coordination chemistry due to the fact that H3IDC can be deprotonated to form H2IDC-, HIDC2- and IDC3- anions at different pH values. H3IDC has been widely used to coordinate with metal salts to obtain a series of MOFs with different structures and useful properties (Zou et al. , 2006; Li et al. , 2006; Liu et al. , 2004; Sun et al. , 2005), Therefore, we chose H3pimda to obtain a new NiII complex, whose structure is be reported herein.
As illustrated in Fig. 1, the title compound contains an NiII ion, coordinated by two mono-deprotonated H2pimda- anions and two coordinated water molecules in a slightly distorted octahedral geometry. Four solvent water molecules complete the formula unit. The dihedral angle between the two imidazole rings is 95.11 (17)°. In the
a three-dimensional framework is formed by intermolecular O-H···O and N-H···O hydrogen bonds involving the solvent water molecules, coordinated water molecules, carboxy O atoms and the protonated N atoms of H3pimda ligands. The propyl groups of each H3pimda ligands are disordered over two sets of sites with refined occupancies of 0.50 (2):0.50 (2) and 0.762 (11):0.238 (11). In one water solvent molecule, one of the H atoms was refined as disordered over two sites with equall occupancies.For the potential uses and diverse structural types of imidazole-4,5-dicarboxylic acid complexes, see: Zou et al. (2006); Li et al. (2006); Liu et al. (2004); Sun et al. (2005).
Data collection: SMART (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The assymetric unit of the title compound, showing the atomic numbering scheme. Non-H atoms are shown with 30% probability displacement ellipsoids. H atoms bonded to C atoms are not shown. The disorder is not shown. | |
Fig. 2. Part of the crystal structure showing O—H···O and N—H···O hydrogen bonds as dashed lines. Neither the disorder in the complex nor the H atoms which are not involved in hydrogen bonds are shown. |
[Ni(C8H9N2O4)2(H2O)2]·4H2O | Z = 2 |
Mr = 561.15 | F(000) = 588 |
Triclinic, P1 | Dx = 1.516 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 10.466 (1) Å | Cell parameters from 2051 reflections |
b = 10.5829 (11) Å | θ = 2.5–23.9° |
c = 11.3011 (13) Å | µ = 0.86 mm−1 |
α = 81.585 (1)° | T = 298 K |
β = 83.580 (1)° | Block, green |
γ = 86.869 (2)° | 0.48 × 0.40 × 0.33 mm |
V = 1229.5 (2) Å3 |
Bruker SMART 1000 CCD area-detector diffractometer | 4280 independent reflections |
Radiation source: fine-focus sealed tube | 2986 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
φ and ω scans | θmax = 25.0°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2007) | h = −12→12 |
Tmin = 0.682, Tmax = 0.764 | k = −11→12 |
6402 measured reflections | l = −10→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.066 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.208 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0945P)2 + 3.581P] where P = (Fo2 + 2Fc2)/3 |
4280 reflections | (Δ/σ)max = 0.001 |
358 parameters | Δρmax = 0.75 e Å−3 |
0 restraints | Δρmin = −1.16 e Å−3 |
[Ni(C8H9N2O4)2(H2O)2]·4H2O | γ = 86.869 (2)° |
Mr = 561.15 | V = 1229.5 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 10.466 (1) Å | Mo Kα radiation |
b = 10.5829 (11) Å | µ = 0.86 mm−1 |
c = 11.3011 (13) Å | T = 298 K |
α = 81.585 (1)° | 0.48 × 0.40 × 0.33 mm |
β = 83.580 (1)° |
Bruker SMART 1000 CCD area-detector diffractometer | 4280 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2007) | 2986 reflections with I > 2σ(I) |
Tmin = 0.682, Tmax = 0.764 | Rint = 0.026 |
6402 measured reflections |
R[F2 > 2σ(F2)] = 0.066 | 0 restraints |
wR(F2) = 0.208 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.75 e Å−3 |
4280 reflections | Δρmin = −1.16 e Å−3 |
358 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Ni1 | 0.15302 (7) | 0.21144 (7) | 0.80787 (6) | 0.0439 (3) | |
N1 | 0.3486 (4) | 0.2176 (4) | 0.8285 (4) | 0.0403 (10) | |
N2 | 0.5487 (4) | 0.2256 (4) | 0.8689 (4) | 0.0449 (11) | |
H2 | 0.6187 | 0.2557 | 0.8847 | 0.054* | |
N3 | 0.1723 (4) | 0.2837 (4) | 0.6268 (4) | 0.0432 (11) | |
N4 | 0.1924 (5) | 0.3537 (5) | 0.4338 (4) | 0.0520 (13) | |
H4 | 0.2055 | 0.3536 | 0.3573 | 0.062* | |
O1 | 0.2132 (4) | 0.0190 (4) | 0.7957 (4) | 0.0502 (10) | |
O2 | 0.3797 (4) | −0.1188 (4) | 0.8133 (4) | 0.0621 (12) | |
O3 | 0.6045 (4) | −0.1139 (4) | 0.8582 (4) | 0.0596 (11) | |
H3 | 0.5301 | −0.1123 | 0.8414 | 0.089* | |
O4 | 0.7386 (4) | 0.0255 (4) | 0.8992 (4) | 0.0598 (12) | |
O5 | 0.1072 (4) | 0.4049 (4) | 0.8174 (3) | 0.0493 (10) | |
O6 | 0.0993 (5) | 0.5962 (4) | 0.7061 (4) | 0.0590 (11) | |
O7 | 0.1250 (5) | 0.6826 (4) | 0.4849 (4) | 0.0625 (12) | |
H7 | 0.1167 | 0.6548 | 0.5568 | 0.094* | |
O8 | 0.1656 (4) | 0.6062 (5) | 0.3144 (4) | 0.0671 (13) | |
O9 | −0.0354 (4) | 0.1738 (5) | 0.7901 (5) | 0.0746 (15) | |
H9C | −0.0961 | 0.1264 | 0.8235 | 0.090* | |
H9D | −0.0686 | 0.2430 | 0.7563 | 0.090* | |
O10 | 0.1162 (5) | 0.1683 (5) | 0.9898 (4) | 0.0798 (17) | |
H10C | 0.1598 | 0.1079 | 1.0266 | 0.096* | |
H10D | 0.0495 | 0.1848 | 1.0361 | 0.096* | |
O11 | 0.9033 (5) | 0.2266 (5) | 0.1288 (5) | 0.0849 (17) | |
H11C | 0.8673 | 0.1570 | 0.1577 | 0.102* | |
H11D | 0.8986 | 0.2744 | 0.1835 | 0.102* | |
O12 | 0.2218 (7) | 0.3264 (7) | 0.1953 (5) | 0.110 (2) | |
H12C | 0.1862 | 0.3693 | 0.1375 | 0.132* | |
H12D | 0.2694 | 0.2670 | 0.1686 | 0.132* | |
O13 | 0.2630 (6) | 0.6526 (7) | 0.0459 (6) | 0.112 (2) | |
H13C | 0.2576 | 0.7035 | −0.0191 | 0.135* | |
H13D | 0.1980 | 0.6641 | 0.0960 | 0.135* | |
O14 | 0.1006 (8) | 0.4916 (9) | 0.0385 (7) | 0.152 (3) | |
H14G | 0.1650 | 0.5203 | −0.0085 | 0.182* | |
H14F | 0.0605 | 0.4436 | 0.0024 | 0.182* | 0.50 |
H14H | 0.0326 | 0.5153 | 0.0054 | 0.182* | 0.50 |
C1 | 0.3287 (5) | −0.0078 (5) | 0.8114 (5) | 0.0436 (13) | |
C2 | 0.4061 (5) | 0.0981 (5) | 0.8310 (5) | 0.0394 (12) | |
C3 | 0.5317 (5) | 0.1013 (5) | 0.8560 (5) | 0.0417 (13) | |
C4 | 0.6338 (6) | −0.0005 (6) | 0.8721 (5) | 0.0466 (14) | |
C5 | 0.4375 (5) | 0.2931 (5) | 0.8528 (5) | 0.0457 (14) | |
C6 | 0.4222 (7) | 0.4317 (7) | 0.8555 (8) | 0.072 (2) | |
H6A | 0.4286 | 0.4444 | 0.9379 | 0.086* | 0.50 (2) |
H6B | 0.3345 | 0.4560 | 0.8394 | 0.086* | 0.50 (2) |
H6'A | 0.4762 | 0.4594 | 0.9105 | 0.086* | 0.50 (2) |
H6'B | 0.3334 | 0.4576 | 0.8773 | 0.086* | 0.50 (2) |
C7 | 0.5053 (15) | 0.5269 (15) | 0.7781 (18) | 0.069 (6) | 0.50 (2) |
H7A | 0.5949 | 0.5062 | 0.7896 | 0.082* | 0.50 (2) |
H7B | 0.4838 | 0.6115 | 0.7996 | 0.082* | 0.50 (2) |
C8 | 0.484 (2) | 0.525 (3) | 0.645 (2) | 0.093 (8) | 0.50 (2) |
H8A | 0.4726 | 0.4389 | 0.6324 | 0.139* | 0.50 (2) |
H8B | 0.5580 | 0.5582 | 0.5940 | 0.139* | 0.50 (2) |
H8C | 0.4092 | 0.5771 | 0.6261 | 0.139* | 0.50 (2) |
C7' | 0.4676 (19) | 0.4840 (19) | 0.718 (2) | 0.068 (6) | 0.50 (2) |
H7'1 | 0.5570 | 0.4575 | 0.6994 | 0.082* | 0.50 (2) |
H7'2 | 0.4170 | 0.4455 | 0.6665 | 0.082* | 0.50 (2) |
C8' | 0.4540 (19) | 0.627 (2) | 0.689 (2) | 0.100 (8) | 0.50 (2) |
H8'1 | 0.3664 | 0.6540 | 0.7096 | 0.150* | 0.50 (2) |
H8'2 | 0.4775 | 0.6522 | 0.6047 | 0.150* | 0.50 (2) |
H8'3 | 0.5094 | 0.6655 | 0.7345 | 0.150* | 0.50 (2) |
C9 | 0.1183 (5) | 0.4772 (6) | 0.7179 (5) | 0.0443 (13) | |
C10 | 0.1527 (5) | 0.4136 (5) | 0.6109 (5) | 0.0380 (12) | |
C11 | 0.1660 (5) | 0.4595 (6) | 0.4900 (5) | 0.0431 (13) | |
C12 | 0.1541 (5) | 0.5891 (6) | 0.4234 (5) | 0.0470 (14) | |
C13 | 0.1946 (6) | 0.2498 (6) | 0.5181 (6) | 0.0553 (16) | |
C14 | 0.2084 (10) | 0.1182 (8) | 0.4929 (7) | 0.087 (3) | |
H14A | 0.1637 | 0.1128 | 0.4232 | 0.104* | 0.762 (11) |
H14B | 0.1647 | 0.0643 | 0.5605 | 0.104* | 0.762 (11) |
H14C | 0.2409 | 0.0704 | 0.5641 | 0.104* | 0.238 (11) |
H14D | 0.2791 | 0.1187 | 0.4296 | 0.104* | 0.238 (11) |
C15 | 0.3406 (12) | 0.0638 (11) | 0.4702 (11) | 0.088 (4) | 0.762 (11) |
H15A | 0.3896 | 0.0756 | 0.5354 | 0.106* | 0.762 (11) |
H15B | 0.3823 | 0.1091 | 0.3964 | 0.106* | 0.762 (11) |
C16 | 0.3405 (16) | −0.0808 (12) | 0.4595 (14) | 0.128 (6) | 0.762 (11) |
H16A | 0.2931 | −0.1248 | 0.5296 | 0.192* | 0.762 (11) |
H16B | 0.4275 | −0.1150 | 0.4530 | 0.192* | 0.762 (11) |
H16C | 0.3010 | −0.0919 | 0.3892 | 0.192* | 0.762 (11) |
C15' | 0.121 (4) | 0.030 (4) | 0.449 (3) | 0.086 (11) | 0.238 (11) |
H15C | 0.0543 | 0.0036 | 0.5125 | 0.103* | 0.238 (11) |
H15D | 0.1707 | −0.0455 | 0.4292 | 0.103* | 0.238 (11) |
C16' | 0.058 (4) | 0.093 (4) | 0.338 (4) | 0.110 (15) | 0.238 (11) |
H16D | 0.0276 | 0.1778 | 0.3492 | 0.165* | 0.238 (11) |
H16E | −0.0124 | 0.0433 | 0.3268 | 0.165* | 0.238 (11) |
H16F | 0.1205 | 0.0965 | 0.2684 | 0.165* | 0.238 (11) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni1 | 0.0360 (4) | 0.0492 (5) | 0.0421 (4) | 0.0037 (3) | −0.0052 (3) | 0.0065 (3) |
N1 | 0.038 (2) | 0.040 (2) | 0.041 (2) | 0.004 (2) | −0.0074 (19) | −0.0003 (19) |
N2 | 0.036 (2) | 0.047 (3) | 0.050 (3) | −0.003 (2) | −0.011 (2) | 0.004 (2) |
N3 | 0.045 (3) | 0.045 (3) | 0.039 (3) | 0.000 (2) | −0.007 (2) | 0.000 (2) |
N4 | 0.059 (3) | 0.060 (3) | 0.036 (3) | 0.008 (3) | −0.008 (2) | −0.006 (2) |
O1 | 0.049 (2) | 0.046 (2) | 0.054 (2) | −0.0064 (19) | −0.0120 (19) | 0.0011 (18) |
O2 | 0.061 (3) | 0.042 (2) | 0.084 (3) | 0.004 (2) | −0.009 (2) | −0.012 (2) |
O3 | 0.050 (3) | 0.055 (3) | 0.072 (3) | 0.016 (2) | −0.007 (2) | −0.009 (2) |
O4 | 0.039 (2) | 0.067 (3) | 0.067 (3) | 0.010 (2) | −0.007 (2) | 0.011 (2) |
O5 | 0.052 (2) | 0.058 (3) | 0.035 (2) | 0.0139 (19) | −0.0061 (17) | −0.0037 (18) |
O6 | 0.078 (3) | 0.050 (3) | 0.049 (2) | 0.011 (2) | −0.012 (2) | −0.0061 (19) |
O7 | 0.075 (3) | 0.050 (3) | 0.059 (3) | 0.003 (2) | −0.012 (2) | 0.008 (2) |
O8 | 0.060 (3) | 0.084 (3) | 0.047 (3) | 0.009 (2) | −0.003 (2) | 0.016 (2) |
O9 | 0.041 (2) | 0.081 (3) | 0.089 (4) | −0.010 (2) | −0.015 (2) | 0.039 (3) |
O10 | 0.066 (3) | 0.103 (4) | 0.050 (3) | 0.043 (3) | 0.011 (2) | 0.028 (3) |
O11 | 0.076 (4) | 0.083 (4) | 0.098 (4) | −0.030 (3) | 0.025 (3) | −0.040 (3) |
O12 | 0.133 (6) | 0.133 (6) | 0.070 (4) | 0.049 (4) | −0.022 (4) | −0.042 (4) |
O13 | 0.094 (5) | 0.138 (6) | 0.122 (5) | 0.009 (4) | −0.050 (4) | −0.049 (4) |
O14 | 0.146 (7) | 0.185 (9) | 0.124 (7) | 0.007 (6) | −0.015 (5) | −0.024 (6) |
C1 | 0.040 (3) | 0.046 (3) | 0.043 (3) | 0.000 (3) | −0.005 (2) | 0.000 (2) |
C2 | 0.038 (3) | 0.040 (3) | 0.037 (3) | 0.004 (2) | −0.002 (2) | 0.002 (2) |
C3 | 0.039 (3) | 0.042 (3) | 0.040 (3) | 0.003 (2) | −0.001 (2) | 0.004 (2) |
C4 | 0.041 (3) | 0.053 (4) | 0.039 (3) | 0.008 (3) | 0.002 (2) | 0.004 (3) |
C5 | 0.041 (3) | 0.044 (3) | 0.051 (3) | 0.004 (3) | −0.012 (3) | 0.000 (3) |
C6 | 0.061 (4) | 0.056 (4) | 0.102 (6) | 0.003 (3) | −0.032 (4) | −0.008 (4) |
C7 | 0.054 (9) | 0.052 (9) | 0.103 (14) | −0.008 (7) | −0.022 (9) | −0.008 (8) |
C8 | 0.067 (12) | 0.12 (2) | 0.096 (17) | −0.009 (12) | −0.022 (12) | −0.009 (14) |
C7' | 0.052 (10) | 0.059 (11) | 0.094 (15) | −0.008 (8) | −0.010 (11) | −0.008 (11) |
C8' | 0.091 (14) | 0.084 (15) | 0.119 (17) | 0.010 (11) | −0.010 (12) | 0.000 (12) |
C9 | 0.041 (3) | 0.048 (3) | 0.043 (3) | 0.006 (3) | −0.008 (2) | −0.001 (3) |
C10 | 0.033 (3) | 0.043 (3) | 0.037 (3) | 0.002 (2) | −0.007 (2) | 0.000 (2) |
C11 | 0.033 (3) | 0.052 (3) | 0.043 (3) | −0.001 (2) | −0.005 (2) | −0.001 (3) |
C12 | 0.036 (3) | 0.057 (4) | 0.044 (3) | 0.000 (3) | −0.007 (2) | 0.007 (3) |
C13 | 0.065 (4) | 0.056 (4) | 0.045 (3) | 0.006 (3) | −0.010 (3) | −0.010 (3) |
C14 | 0.123 (8) | 0.074 (5) | 0.061 (5) | 0.017 (5) | −0.014 (5) | −0.007 (4) |
C15 | 0.101 (9) | 0.081 (8) | 0.079 (7) | 0.003 (7) | −0.002 (6) | −0.009 (6) |
C16 | 0.162 (15) | 0.080 (9) | 0.133 (13) | 0.006 (9) | 0.028 (11) | −0.024 (8) |
C15' | 0.10 (3) | 0.08 (2) | 0.07 (2) | 0.00 (2) | 0.004 (19) | −0.006 (18) |
C16' | 0.12 (4) | 0.10 (3) | 0.10 (3) | 0.01 (3) | 0.02 (3) | 0.00 (2) |
Ni1—O10 | 2.038 (4) | C5—C6 | 1.472 (9) |
Ni1—N3 | 2.069 (4) | C6—C7 | 1.485 (17) |
Ni1—O9 | 2.071 (4) | C6—C7' | 1.60 (2) |
Ni1—N1 | 2.092 (4) | C6—H6A | 0.9700 |
Ni1—O5 | 2.092 (4) | C6—H6B | 0.9700 |
Ni1—O1 | 2.118 (4) | C6—H6'A | 0.9700 |
N1—C5 | 1.334 (7) | C6—H6'B | 0.9700 |
N1—C2 | 1.368 (7) | C7—C8 | 1.55 (3) |
N2—C5 | 1.348 (7) | C7—H7A | 0.9700 |
N2—C3 | 1.368 (7) | C7—H7B | 0.9700 |
N2—H2 | 0.8600 | C8—H8A | 0.9600 |
N3—C13 | 1.322 (8) | C8—H8B | 0.9600 |
N3—C10 | 1.366 (7) | C8—H8C | 0.9600 |
N4—C13 | 1.347 (8) | C7'—C8' | 1.50 (3) |
N4—C11 | 1.367 (8) | C7'—H7'1 | 0.9700 |
N4—H4 | 0.8600 | C7'—H7'2 | 0.9700 |
O1—C1 | 1.253 (7) | C8'—H8'1 | 0.9600 |
O2—C1 | 1.262 (7) | C8'—H8'2 | 0.9600 |
O3—C4 | 1.290 (7) | C8'—H8'3 | 0.9600 |
O3—H3 | 0.8200 | C9—C10 | 1.469 (8) |
O4—C4 | 1.227 (7) | C10—C11 | 1.376 (7) |
O5—C9 | 1.262 (7) | C11—C12 | 1.471 (8) |
O6—C9 | 1.255 (7) | C13—C14 | 1.459 (10) |
O7—C12 | 1.294 (8) | C14—C15 | 1.479 (14) |
O7—H7 | 0.8200 | C14—C15' | 1.51 (4) |
O8—C12 | 1.212 (7) | C14—H14A | 0.9700 |
O9—H9C | 0.8500 | C14—H14B | 0.9700 |
O9—H9D | 0.8501 | C14—H14C | 0.9700 |
O10—H10C | 0.8500 | C14—H14D | 0.9700 |
O10—H10D | 0.8500 | C15—C16 | 1.552 (16) |
O11—H11C | 0.8500 | C15—H15A | 0.9700 |
O11—H11D | 0.8500 | C15—H15B | 0.9700 |
O12—H12C | 0.8500 | C16—H16A | 0.9600 |
O12—H12D | 0.8500 | C16—H16B | 0.9600 |
O13—H13C | 0.8500 | C16—H16C | 0.9600 |
O13—H13D | 0.8500 | C15'—C16' | 1.52 (5) |
O14—H14G | 0.8500 | C15'—H15C | 0.9700 |
O14—H14F | 0.8500 | C15'—H15D | 0.9700 |
O14—H14H | 0.8500 | C16'—H16D | 0.9600 |
C1—C2 | 1.474 (8) | C16'—H16E | 0.9600 |
C2—C3 | 1.378 (8) | C16'—H16F | 0.9600 |
C3—C4 | 1.482 (8) | ||
O10—Ni1—N3 | 170.23 (19) | C7—C6—H6'B | 117.7 |
O10—Ni1—O9 | 89.5 (2) | C7'—C6—H6'B | 111.2 |
N3—Ni1—O9 | 87.80 (18) | H6'A—C6—H6'B | 109.4 |
O10—Ni1—N1 | 89.03 (19) | C6—C7—C8 | 109.0 (17) |
N3—Ni1—N1 | 95.10 (18) | C6—C7—H7A | 109.9 |
O9—Ni1—N1 | 170.79 (18) | C8—C7—H7A | 109.9 |
O10—Ni1—O5 | 90.89 (18) | C6—C7—H7B | 109.9 |
N3—Ni1—O5 | 79.85 (16) | C8—C7—H7B | 109.9 |
O9—Ni1—O5 | 92.39 (19) | H7A—C7—H7B | 108.3 |
N1—Ni1—O5 | 96.72 (17) | C8'—C7'—C6 | 113.1 (18) |
O10—Ni1—O1 | 90.27 (18) | C8'—C7'—H7'1 | 109.0 |
N3—Ni1—O1 | 99.18 (17) | C6—C7'—H7'1 | 109.0 |
O9—Ni1—O1 | 91.48 (18) | C8'—C7'—H7'2 | 109.0 |
N1—Ni1—O1 | 79.43 (16) | C6—C7'—H7'2 | 109.0 |
O5—Ni1—O1 | 175.97 (16) | H7'1—C7'—H7'2 | 107.8 |
C5—N1—C2 | 106.1 (4) | C7'—C8'—H8'1 | 109.5 |
C5—N1—Ni1 | 143.1 (4) | C7'—C8'—H8'2 | 109.5 |
C2—N1—Ni1 | 110.3 (3) | H8'1—C8'—H8'2 | 109.5 |
C5—N2—C3 | 108.5 (5) | C7'—C8'—H8'3 | 109.5 |
C5—N2—H2 | 125.7 | H8'1—C8'—H8'3 | 109.5 |
C3—N2—H2 | 125.7 | H8'2—C8'—H8'3 | 109.5 |
C13—N3—C10 | 106.5 (5) | O6—C9—O5 | 124.3 (5) |
C13—N3—Ni1 | 142.9 (4) | O6—C9—C10 | 119.7 (5) |
C10—N3—Ni1 | 110.6 (3) | O5—C9—C10 | 116.0 (5) |
C13—N4—C11 | 108.6 (5) | N3—C10—C11 | 109.6 (5) |
C13—N4—H4 | 125.7 | N3—C10—C9 | 118.3 (5) |
C11—N4—H4 | 125.7 | C11—C10—C9 | 132.1 (5) |
C1—O1—Ni1 | 114.9 (4) | N4—C11—C10 | 105.0 (5) |
C4—O3—H3 | 109.5 | N4—C11—C12 | 122.5 (5) |
C9—O5—Ni1 | 115.1 (4) | C10—C11—C12 | 132.4 (6) |
C12—O7—H7 | 109.5 | O8—C12—O7 | 121.5 (6) |
Ni1—O9—H9C | 141.0 | O8—C12—C11 | 120.6 (6) |
Ni1—O9—H9D | 106.2 | O7—C12—C11 | 117.8 (5) |
H9C—O9—H9D | 108.2 | N3—C13—N4 | 110.2 (5) |
Ni1—O10—H10C | 118.9 | N3—C13—C14 | 124.8 (6) |
Ni1—O10—H10D | 130.0 | N4—C13—C14 | 124.8 (6) |
H10C—O10—H10D | 108.5 | C13—C14—C15 | 117.4 (9) |
H11C—O11—H11D | 108.6 | C13—C14—C15' | 133.9 (16) |
H12C—O12—H12D | 108.7 | C15—C14—C15' | 106.0 (16) |
H13C—O13—H13D | 110.1 | C13—C14—H14A | 107.9 |
H14G—O14—H14F | 108.6 | C15—C14—H14A | 107.9 |
H14G—O14—H14H | 108.5 | C13—C14—H14B | 107.9 |
O1—C1—O2 | 123.8 (5) | C15—C14—H14B | 107.9 |
O1—C1—C2 | 116.6 (5) | H14A—C14—H14B | 107.2 |
O2—C1—C2 | 119.6 (5) | C13—C14—H14C | 104.5 |
N1—C2—C3 | 109.8 (5) | C15'—C14—H14C | 106.3 |
N1—C2—C1 | 118.5 (5) | C13—C14—H14D | 104.7 |
C3—C2—C1 | 131.7 (5) | H14C—C14—H14D | 105.7 |
N2—C3—C2 | 105.3 (5) | C14—C15—C16 | 111.6 (11) |
N2—C3—C4 | 122.9 (5) | C14—C15—H15A | 109.3 |
C2—C3—C4 | 131.8 (5) | C16—C15—H15A | 109.3 |
O4—C4—O3 | 123.8 (5) | C14—C15—H15B | 109.3 |
O4—C4—C3 | 119.7 (6) | C16—C15—H15B | 109.3 |
O3—C4—C3 | 116.5 (5) | H15A—C15—H15B | 108.0 |
N1—C5—N2 | 110.3 (5) | C14—C15'—C16' | 113 (3) |
N1—C5—C6 | 126.2 (5) | C14—C15'—H15C | 109.0 |
N2—C5—C6 | 123.4 (5) | C16'—C15'—H15C | 109.0 |
C5—C6—C7 | 123.6 (9) | C14—C15'—H15D | 109.0 |
C5—C6—H6A | 106.4 | C16'—C15'—H15D | 109.0 |
C7—C6—H6A | 106.4 | H15C—C15'—H15D | 107.8 |
C5—C6—H6B | 106.4 | C15'—C16'—H16D | 109.5 |
C7—C6—H6B | 106.4 | C15'—C16'—H16E | 109.5 |
H6A—C6—H6B | 106.5 | H16D—C16'—H16E | 109.5 |
C5—C6—H6'A | 111.6 | C15'—C16'—H16F | 109.5 |
C7'—C6—H6'A | 112.5 | H16D—C16'—H16F | 109.5 |
H6B—C6—H6'A | 131.5 | H16E—C16'—H16F | 109.5 |
C5—C6—H6'B | 111.7 | ||
O10—Ni1—N1—C5 | −83.4 (6) | C2—N1—C5—C6 | 177.5 (6) |
N3—Ni1—N1—C5 | 87.7 (6) | Ni1—N1—C5—C6 | −12.2 (11) |
O5—Ni1—N1—C5 | 7.4 (6) | C3—N2—C5—N1 | −0.6 (6) |
O1—Ni1—N1—C5 | −173.9 (7) | C3—N2—C5—C6 | −177.5 (6) |
O10—Ni1—N1—C2 | 86.6 (4) | N1—C5—C6—C7 | −121.2 (12) |
N3—Ni1—N1—C2 | −102.3 (4) | N2—C5—C6—C7 | 55.2 (13) |
O5—Ni1—N1—C2 | 177.4 (3) | N1—C5—C6—C7' | −89.1 (10) |
O1—Ni1—N1—C2 | −3.8 (3) | N2—C5—C6—C7' | 87.3 (10) |
O9—Ni1—N3—C13 | −82.1 (7) | C5—C6—C7—C8 | 64.8 (16) |
N1—Ni1—N3—C13 | 89.1 (7) | C7'—C6—C7—C8 | 5.8 (18) |
O5—Ni1—N3—C13 | −174.9 (7) | C5—C6—C7'—C8' | 176.0 (15) |
O1—Ni1—N3—C13 | 9.1 (7) | C7—C6—C7'—C8' | −50.6 (17) |
O9—Ni1—N3—C10 | 95.9 (4) | Ni1—O5—C9—O6 | −177.5 (5) |
N1—Ni1—N3—C10 | −92.8 (4) | Ni1—O5—C9—C10 | 4.1 (6) |
O5—Ni1—N3—C10 | 3.1 (3) | C13—N3—C10—C11 | −1.3 (6) |
O1—Ni1—N3—C10 | −172.9 (3) | Ni1—N3—C10—C11 | 180.0 (3) |
O10—Ni1—O1—C1 | −85.5 (4) | C13—N3—C10—C9 | 176.6 (5) |
N3—Ni1—O1—C1 | 97.0 (4) | Ni1—N3—C10—C9 | −2.1 (6) |
O9—Ni1—O1—C1 | −175.0 (4) | O6—C9—C10—N3 | −179.8 (5) |
N1—Ni1—O1—C1 | 3.5 (4) | O5—C9—C10—N3 | −1.3 (7) |
O10—Ni1—O5—C9 | 179.0 (4) | O6—C9—C10—C11 | −2.5 (9) |
N3—Ni1—O5—C9 | −4.1 (4) | O5—C9—C10—C11 | 176.0 (5) |
O9—Ni1—O5—C9 | −91.4 (4) | C13—N4—C11—C10 | 0.0 (7) |
N1—Ni1—O5—C9 | 89.9 (4) | C13—N4—C11—C12 | −178.7 (5) |
Ni1—O1—C1—O2 | 176.4 (4) | N3—C10—C11—N4 | 0.8 (6) |
Ni1—O1—C1—C2 | −2.3 (6) | C9—C10—C11—N4 | −176.7 (6) |
C5—N1—C2—C3 | −0.6 (6) | N3—C10—C11—C12 | 179.3 (6) |
Ni1—N1—C2—C3 | −174.4 (4) | C9—C10—C11—C12 | 1.8 (10) |
C5—N1—C2—C1 | 177.9 (5) | N4—C11—C12—O8 | 1.2 (9) |
Ni1—N1—C2—C1 | 4.1 (6) | C10—C11—C12—O8 | −177.1 (6) |
O1—C1—C2—N1 | −1.3 (7) | N4—C11—C12—O7 | 178.0 (5) |
O2—C1—C2—N1 | 179.9 (5) | C10—C11—C12—O7 | −0.4 (9) |
O1—C1—C2—C3 | 176.7 (5) | C10—N3—C13—N4 | 1.3 (7) |
O2—C1—C2—C3 | −2.1 (9) | Ni1—N3—C13—N4 | 179.3 (5) |
C5—N2—C3—C2 | 0.2 (6) | C10—N3—C13—C14 | −173.9 (7) |
C5—N2—C3—C4 | −177.9 (5) | Ni1—N3—C13—C14 | 4.2 (12) |
N1—C2—C3—N2 | 0.2 (6) | C11—N4—C13—N3 | −0.8 (7) |
C1—C2—C3—N2 | −177.9 (5) | C11—N4—C13—C14 | 174.3 (7) |
N1—C2—C3—C4 | 178.1 (5) | N3—C13—C14—C15 | −98.7 (10) |
C1—C2—C3—C4 | 0.0 (10) | N4—C13—C14—C15 | 86.8 (10) |
N2—C3—C4—O4 | 0.7 (8) | N3—C13—C14—C15' | 103 (2) |
C2—C3—C4—O4 | −177.0 (6) | N4—C13—C14—C15' | −72 (2) |
N2—C3—C4—O3 | 179.5 (5) | C13—C14—C15—C16 | 173.4 (9) |
C2—C3—C4—O3 | 1.8 (9) | C15'—C14—C15—C16 | −22.4 (18) |
C2—N1—C5—N2 | 0.7 (6) | C13—C14—C15'—C16' | 48 (4) |
Ni1—N1—C5—N2 | 171.0 (4) | C15—C14—C15'—C16' | −112 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O13i | 0.86 | 1.91 | 2.745 (7) | 162 |
N4—H4···O12 | 0.86 | 1.88 | 2.734 (7) | 171 |
O3—H3···O2 | 0.82 | 1.65 | 2.466 (6) | 176 |
O7—H7···O6 | 0.82 | 1.70 | 2.523 (6) | 180 |
O9—H9C···O4ii | 0.85 | 2.11 | 2.960 (6) | 174 |
O9—H9D···O8iii | 0.85 | 1.96 | 2.807 (6) | 173 |
O10—H10C···O4iv | 0.85 | 1.87 | 2.724 (6) | 177 |
O10—H10D···O11v | 0.85 | 1.83 | 2.675 (7) | 177 |
O11—H11C···O1vi | 0.85 | 2.06 | 2.904 (6) | 172 |
O11—H11C···O2vi | 0.85 | 2.62 | 3.197 (7) | 127 |
O11—H11D···O6i | 0.85 | 1.99 | 2.830 (6) | 172 |
O12—H12C···O14 | 0.85 | 1.84 | 2.676 (10) | 166 |
O12—H12D···O3vi | 0.85 | 2.07 | 2.904 (7) | 167 |
O13—H13C···O11vii | 0.85 | 2.23 | 2.889 (9) | 134 |
O13—H13D···O8 | 0.85 | 2.44 | 3.068 (9) | 131 |
O14—H14G···O13 | 0.85 | 1.99 | 2.488 (11) | 117 |
O14—H14H···O14viii | 0.85 | 1.54 | 2.355 (17) | 160 |
O14—H14F···O5ix | 0.85 | 2.19 | 2.778 (9) | 127 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x−1, y, z; (iii) −x, −y+1, −z+1; (iv) −x+1, −y, −z+2; (v) x−1, y, z+1; (vi) −x+1, −y, −z+1; (vii) −x+1, −y+1, −z; (viii) −x, −y+1, −z; (ix) x, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | [Ni(C8H9N2O4)2(H2O)2]·4H2O |
Mr | 561.15 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 10.466 (1), 10.5829 (11), 11.3011 (13) |
α, β, γ (°) | 81.585 (1), 83.580 (1), 86.869 (2) |
V (Å3) | 1229.5 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.86 |
Crystal size (mm) | 0.48 × 0.40 × 0.33 |
Data collection | |
Diffractometer | Bruker SMART 1000 CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2007) |
Tmin, Tmax | 0.682, 0.764 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6402, 4280, 2986 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.066, 0.208, 1.05 |
No. of reflections | 4280 |
No. of parameters | 358 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.75, −1.16 |
Computer programs: SMART (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O13i | 0.86 | 1.91 | 2.745 (7) | 162.1 |
N4—H4···O12 | 0.86 | 1.88 | 2.734 (7) | 170.5 |
O3—H3···O2 | 0.82 | 1.65 | 2.466 (6) | 176.1 |
O7—H7···O6 | 0.82 | 1.70 | 2.523 (6) | 179.7 |
O9—H9C···O4ii | 0.85 | 2.11 | 2.960 (6) | 173.6 |
O9—H9D···O8iii | 0.85 | 1.96 | 2.807 (6) | 173.0 |
O10—H10C···O4iv | 0.85 | 1.87 | 2.724 (6) | 177.3 |
O10—H10D···O11v | 0.85 | 1.83 | 2.675 (7) | 176.9 |
O11—H11C···O1vi | 0.85 | 2.06 | 2.904 (6) | 172.0 |
O11—H11C···O2vi | 0.85 | 2.62 | 3.197 (7) | 126.7 |
O11—H11D···O6i | 0.85 | 1.99 | 2.830 (6) | 171.9 |
O12—H12C···O14 | 0.85 | 1.84 | 2.676 (10) | 165.6 |
O12—H12D···O3vi | 0.85 | 2.07 | 2.904 (7) | 167.4 |
O13—H13C···O11vii | 0.85 | 2.23 | 2.889 (9) | 134.1 |
O13—H13D···O8 | 0.85 | 2.44 | 3.068 (9) | 130.8 |
O14—H14G···O13 | 0.85 | 1.99 | 2.488 (11) | 116.9 |
O14—H14H···O14viii | 0.85 | 1.54 | 2.355 (17) | 159.7 |
O14—H14F···O5ix | 0.85 | 2.19 | 2.778 (9) | 126.6 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x−1, y, z; (iii) −x, −y+1, −z+1; (iv) −x+1, −y, −z+2; (v) x−1, y, z+1; (vi) −x+1, −y, −z+1; (vii) −x+1, −y+1, −z; (viii) −x, −y+1, −z; (ix) x, y, z−1. |
Acknowledgements
The authors acknowledge Guang Dong Ocean University for supporting this work.
References
Bruker (2007). SMART, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
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Recently, imidazole-4,5-dicarboxylic acid (H3IDC) with two nitrogen and four oxygen atoms has drawn great interest in coordination chemistry due to the fact that H3IDC can be deprotonated to form H2IDC-, HIDC2- and IDC3- anions at different pH values. H3IDC has been widely used to coordinate with metal salts to obtain a series of MOFs with different structures and useful properties (Zou et al. , 2006; Li et al. , 2006; Liu et al. , 2004; Sun et al. , 2005), Therefore, we chose H3pimda to obtain a new NiII complex, whose structure is be reported herein.
As illustrated in Fig. 1, the title compound contains an NiII ion, coordinated by two mono-deprotonated H2pimda- anions and two coordinated water molecules in a slightly distorted octahedral geometry. Four solvent water molecules complete the formula unit. The dihedral angle between the two imidazole rings is 95.11 (17)°. In the crystal structure, a three-dimensional framework is formed by intermolecular O-H···O and N-H···O hydrogen bonds involving the solvent water molecules, coordinated water molecules, carboxy O atoms and the protonated N atoms of H3pimda ligands. The propyl groups of each H3pimda ligands are disordered over two sets of sites with refined occupancies of 0.50 (2):0.50 (2) and 0.762 (11):0.238 (11). In one water solvent molecule, one of the H atoms was refined as disordered over two sites with equall occupancies.