organic compounds
Nicotinaldehyde [2,8-bis(trifluoromethyl)quinolin-4-yl]hydrazone monohydrate
aDepartment of Physics, Yuvaraja's College (Constituent College), University of Mysore, Mysore 570 005, Karnataka, India, bDepartment of Pharmaceutical Chemistry, GITAM Institute of Pharmacy, GITAM University, Visakhapatnam 530045, Andhrapradesh, India, cDepartment of Physics, Sri D Devaraja Urs Govt. First Grade College, Hunsur 571 105, Mysore District, Karnataka, India, and dDepartment of Physics, Govt. Science College, Hassan 573 201, Karnataka, India
*Correspondence e-mail: devarajegowda@yahoo.com
In the title compound, C17H10F6N4·H2O, the pyridine ring is not coplanar with the quinoline ring system; the dihedral angle between the two planes is 21.3 (1)°. One of the trifluoromethyl group is disordered over two orientations with occupancies of 0.70 (1) and 0.30 (1). The water molecule is disordered over two positions with occupancies of 0.76 (1) and 0.24 (1). In the crystal, the water molecule is linked to the main molecule via N—H⋯O and C—H⋯O hydrogen bonds, and inversion-related pairs are linked via O—H⋯N hydrogen bonds. In addition, a weak π–π interaction is observed between the pyridine ring and the pyridine ring of the quinoline unit, with a centroid–centroid distance of 3.650 (2) Å.
Related literature
For general background to quinolines, see: Mao et al. (2009); Bermudez et al. (2004); Jayaprakash et al. (2006); Andries et al. (2005). For related structures, see: Al-eryani et al. (2010); Skörska et al. (2005).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2001); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536810030862/ci5125sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810030862/ci5125Isup2.hkl
A mixture of [2,8-bis(trifluoromethyl)quinolin-4-yl]hydrazine (10 mmol) and nicotinaldehyde (10 mmol) in glacial acetic acid (50 ml) was heated at reflux for 3 h. The reaction mixture was concentrated under reduced pressure, cooled, and the obtained solid hydrazone was filtered, washed with water and cold ethanol. The crude product was purified by
Single crystals suitable for X-ray analysis were obtained by slow evaporation of an methanol-water solution at room temperature.One of the trifluoromethyl group is disordered over two orientations with occupancies of 0.702 (8) and 0.298 (8). The C—F distances involving disordered F atoms were restrained to be equal and Uij parameters of these atoms were restrained to an approximate isotropic behaviour. The water molecule is disordered over two positions with occupancies of 0.758 (13) and 0.242 (13); the H atoms of the major disorder component were located in a difference map and refined with O–H and H···H distances of 0.84 (2) and 1.35 (2) Å, respectively. Due to disorder of the oxygen atom in water molecule, all H atoms could not be located. The N-bound H atom was located in a difference map and refined freely. The remaining H atoms were positioned at calculated positions [C–H = 0.93 Å] and refined using a riding model with Uiso(H) = 1.2Ueq(C).
2,8-Bis(trifluoromethyl)quinolin-4-yl]-(2-piperidyl)methanol (mefloquin) is a popular antimalarial drug. It also possesses important structural features required for antimicrobial activity (Mao et al. 2009; Bermudez et al. 2004; Jayaprakash et al. 2006). Quinoline is an essential structural unit found in mefloquin and recently developed antimycobacterial drugs (Andries et al. 2005). Thus, quinoline derivatives are good lead molecules to further develop drug candidates against mycobacterium tuberculosis and as antibacterial agents. On the basis of these observations we have synthesized few quinoline derivatives, in which a hydrazone group has been attached at the 4th position of the mefloquin ring system, expecting that these newly designed molecules would exhibit some antibacterial activity. The crystal structures of the mefloquine base and its salt complexes have been reported (Skörska et al. 2005). Earlier, we reported the
of 3,4-dimethoxybenzaldehyde [2,8-bis(trifluoromethyl)quinolin-4-yl]hydrazone (Al-eryani et al., 2010). We report here the of the title compound.The
of the title compound contains one nicotinaldehyde [2,8-bis(trifluoromethyl)quinolin-4-yl]hydrazone molecule and one water molecule (Fig. 1). The dihedral angle [21.3 (1)°] between the quinoline ring system and the pyridine ring indicates that these two systems are non coplanar.In the π–π interaction is observed between N4/C13–C17 pyridine ring at (-x, y, 1/2-z) and N1/C1–C5 pyridine ring of quinoline at (x,y,z), with a centroid-centroid distance of 3.650 (3) Å.
intermolecular O—H···N, N—H···O and C—H···O hydrogen bonds (Table 1) are observed. In addition, a weakFor general background to quinolines, see: Mao et al. (2009); Bermudez et al. (2004); Jayaprakash et al. (2006); Andries et al. (2005). For related structures, see: Al-eryani et al. (2010); Skörska et al. (2005).
Data collection: SMART (Bruker, 2001); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The asymmetric unit of the title compound. Displacement ellipsoids are drawn at the 50% probability level. Only the major disorder components are shown. Dashed lines indicate hydrogen bonds. |
C17H10F6N4·H2O | F(000) = 1632 |
Mr = 402.31 | Dx = 1.522 Mg m−3 |
Monoclinic, C2/c | Melting point: 486 K |
Hall symbol: -C 2yc | Mo Kα radiation, λ = 0.71073 Å |
a = 21.103 (4) Å | Cell parameters from 3416 reflections |
b = 15.120 (3) Å | θ = 1.7–26.0° |
c = 12.537 (3) Å | µ = 0.14 mm−1 |
β = 118.633 (3)° | T = 295 K |
V = 3511.1 (13) Å3 | Plate, colourless |
Z = 8 | 0.22 × 0.15 × 0.12 mm |
Bruker SMART CCD area-detector diffractometer | 3416 independent reflections |
Radiation source: fine-focus sealed tube | 2309 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.035 |
ω and φ scans | θmax = 26.0°, θmin = 1.7° |
Absorption correction: ψ scan (SADABS; Bruker, 2001) | h = −26→24 |
Tmin = 0.975, Tmax = 0.983 | k = −18→18 |
13267 measured reflections | l = −15→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.064 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.169 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0764P)2 + 2.423P] where P = (Fo2 + 2Fc2)/3 |
3416 reflections | (Δ/σ)max = 0.001 |
301 parameters | Δρmax = 0.26 e Å−3 |
54 restraints | Δρmin = −0.25 e Å−3 |
C17H10F6N4·H2O | V = 3511.1 (13) Å3 |
Mr = 402.31 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 21.103 (4) Å | µ = 0.14 mm−1 |
b = 15.120 (3) Å | T = 295 K |
c = 12.537 (3) Å | 0.22 × 0.15 × 0.12 mm |
β = 118.633 (3)° |
Bruker SMART CCD area-detector diffractometer | 3416 independent reflections |
Absorption correction: ψ scan (SADABS; Bruker, 2001) | 2309 reflections with I > 2σ(I) |
Tmin = 0.975, Tmax = 0.983 | Rint = 0.035 |
13267 measured reflections |
R[F2 > 2σ(F2)] = 0.064 | 54 restraints |
wR(F2) = 0.169 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.26 e Å−3 |
3416 reflections | Δρmin = −0.25 e Å−3 |
301 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
F1A | 0.5904 (2) | −0.0211 (2) | 0.5513 (4) | 0.0998 (17) | 0.702 (8) |
F2A | 0.6589 (4) | −0.0445 (5) | 0.4831 (7) | 0.136 (3) | 0.702 (8) |
F3A | 0.5538 (5) | −0.0032 (4) | 0.3634 (5) | 0.175 (4) | 0.702 (8) |
F1B | 0.6012 (6) | −0.0127 (6) | 0.3579 (8) | 0.091 (3) | 0.298 (8) |
F2B | 0.5395 (6) | 0.0067 (8) | 0.4374 (17) | 0.130 (5) | 0.298 (8) |
F3B | 0.6570 (7) | −0.0477 (7) | 0.5238 (10) | 0.110 (6) | 0.298 (8) |
F4 | 0.80847 (12) | 0.08843 (14) | 0.83893 (19) | 0.0933 (7) | |
F5 | 0.71855 (14) | 0.12394 (18) | 0.8610 (2) | 0.1087 (8) | |
F6 | 0.81994 (15) | 0.18889 (16) | 0.96395 (17) | 0.1198 (10) | |
N1 | 0.68113 (12) | 0.11985 (15) | 0.6073 (2) | 0.0554 (6) | |
N2 | 0.61107 (14) | 0.31173 (19) | 0.3332 (2) | 0.0623 (7) | |
N3 | 0.56960 (13) | 0.28345 (17) | 0.2162 (2) | 0.0607 (7) | |
N4 | 0.42311 (17) | 0.3601 (2) | −0.1996 (3) | 0.0905 (10) | |
C1 | 0.63497 (15) | 0.10370 (18) | 0.4929 (2) | 0.0558 (7) | |
C2 | 0.60955 (15) | 0.16393 (18) | 0.3984 (2) | 0.0550 (7) | |
H2 | 0.5766 | 0.1468 | 0.3198 | 0.066* | |
C3 | 0.63410 (14) | 0.24976 (18) | 0.4233 (2) | 0.0509 (7) | |
C4 | 0.68355 (14) | 0.27268 (18) | 0.5461 (2) | 0.0505 (7) | |
C5 | 0.70505 (14) | 0.20455 (17) | 0.6345 (2) | 0.0499 (7) | |
C6 | 0.75344 (16) | 0.22617 (19) | 0.7576 (2) | 0.0581 (8) | |
C7 | 0.77952 (18) | 0.3094 (2) | 0.7890 (3) | 0.0692 (9) | |
H7 | 0.8118 | 0.3222 | 0.8698 | 0.083* | |
C8 | 0.75865 (18) | 0.3761 (2) | 0.7019 (3) | 0.0729 (9) | |
H8 | 0.7769 | 0.4330 | 0.7248 | 0.087* | |
C9 | 0.71174 (17) | 0.35831 (19) | 0.5837 (3) | 0.0641 (8) | |
H9 | 0.6980 | 0.4035 | 0.5265 | 0.077* | |
C10 | 0.6071 (2) | 0.0102 (2) | 0.4681 (3) | 0.0809 (11) | |
C11 | 0.7746 (2) | 0.1574 (2) | 0.8540 (3) | 0.0750 (10) | |
C12 | 0.54235 (17) | 0.3419 (2) | 0.1340 (3) | 0.0699 (9) | |
H12 | 0.5489 | 0.4015 | 0.1546 | 0.084* | |
C13 | 0.50072 (17) | 0.3156 (2) | 0.0070 (3) | 0.0639 (8) | |
C14 | 0.49612 (17) | 0.2291 (2) | −0.0322 (3) | 0.0662 (9) | |
H14 | 0.5209 | 0.1843 | 0.0232 | 0.079* | |
C15 | 0.45503 (19) | 0.2098 (2) | −0.1525 (3) | 0.0755 (10) | |
H15 | 0.4508 | 0.1519 | −0.1798 | 0.091* | |
C16 | 0.4200 (2) | 0.2770 (3) | −0.2323 (3) | 0.0813 (11) | |
H16 | 0.3926 | 0.2631 | −0.3142 | 0.098* | |
C17 | 0.4624 (2) | 0.3780 (2) | −0.0816 (3) | 0.0893 (12) | |
H17 | 0.4642 | 0.4364 | −0.0570 | 0.107* | |
O1W | 0.6581 (3) | 0.4946 (2) | 0.3473 (4) | 0.088 (2) | 0.758 (13) |
H1W | 0.631 (3) | 0.537 (3) | 0.315 (6) | 0.132* | 0.758 (13) |
H2W | 0.695 (2) | 0.498 (4) | 0.341 (7) | 0.132* | 0.758 (13) |
O2W | 0.6032 (15) | 0.5042 (8) | 0.3654 (12) | 0.119 (10) | 0.242 (13) |
H2N | 0.6237 (16) | 0.368 (2) | 0.345 (3) | 0.065 (9)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1A | 0.121 (3) | 0.070 (2) | 0.112 (3) | −0.0409 (19) | 0.059 (3) | −0.0055 (18) |
F2A | 0.200 (6) | 0.079 (4) | 0.169 (7) | 0.015 (3) | 0.120 (5) | −0.009 (4) |
F3A | 0.186 (6) | 0.087 (3) | 0.093 (3) | −0.068 (4) | −0.062 (3) | 0.022 (3) |
F1B | 0.098 (6) | 0.065 (4) | 0.089 (6) | −0.019 (5) | 0.027 (5) | −0.040 (4) |
F2B | 0.117 (8) | 0.105 (7) | 0.198 (12) | −0.053 (5) | 0.099 (8) | −0.042 (7) |
F3B | 0.150 (9) | 0.039 (4) | 0.060 (5) | −0.002 (5) | −0.014 (5) | 0.019 (4) |
F4 | 0.0962 (15) | 0.0700 (13) | 0.0804 (14) | 0.0121 (11) | 0.0155 (12) | 0.0131 (10) |
F5 | 0.1159 (19) | 0.126 (2) | 0.0824 (15) | −0.0115 (15) | 0.0462 (14) | 0.0322 (13) |
F6 | 0.156 (2) | 0.0963 (16) | 0.0446 (11) | −0.0156 (14) | −0.0024 (12) | 0.0008 (10) |
N1 | 0.0587 (14) | 0.0482 (13) | 0.0457 (13) | −0.0017 (11) | 0.0141 (11) | 0.0017 (10) |
N2 | 0.0664 (17) | 0.0551 (16) | 0.0467 (13) | −0.0082 (12) | 0.0122 (12) | 0.0045 (11) |
N3 | 0.0571 (15) | 0.0648 (15) | 0.0470 (13) | −0.0053 (12) | 0.0144 (12) | 0.0066 (11) |
N4 | 0.098 (2) | 0.087 (2) | 0.0532 (16) | −0.0108 (17) | 0.0094 (16) | 0.0226 (16) |
C1 | 0.0562 (17) | 0.0488 (16) | 0.0488 (15) | 0.0003 (13) | 0.0142 (13) | −0.0010 (12) |
C2 | 0.0518 (16) | 0.0546 (17) | 0.0428 (14) | −0.0016 (13) | 0.0099 (12) | −0.0031 (12) |
C3 | 0.0465 (15) | 0.0529 (16) | 0.0458 (15) | 0.0019 (12) | 0.0162 (12) | 0.0028 (12) |
C4 | 0.0456 (15) | 0.0509 (16) | 0.0490 (15) | −0.0003 (12) | 0.0178 (13) | −0.0010 (12) |
C5 | 0.0463 (15) | 0.0503 (16) | 0.0455 (14) | 0.0014 (12) | 0.0158 (12) | 0.0003 (12) |
C6 | 0.0588 (18) | 0.0577 (17) | 0.0464 (15) | −0.0016 (14) | 0.0160 (13) | −0.0028 (13) |
C7 | 0.071 (2) | 0.065 (2) | 0.0496 (16) | −0.0067 (16) | 0.0111 (15) | −0.0099 (15) |
C8 | 0.076 (2) | 0.0534 (18) | 0.064 (2) | −0.0126 (16) | 0.0141 (17) | −0.0098 (15) |
C9 | 0.0663 (19) | 0.0486 (17) | 0.0614 (18) | −0.0040 (14) | 0.0177 (15) | 0.0032 (13) |
C10 | 0.093 (3) | 0.053 (2) | 0.063 (2) | 0.0027 (19) | 0.010 (2) | −0.0039 (17) |
C11 | 0.086 (3) | 0.068 (2) | 0.0471 (18) | −0.0073 (19) | 0.0134 (17) | 0.0009 (15) |
C12 | 0.071 (2) | 0.0597 (19) | 0.0548 (18) | −0.0084 (15) | 0.0108 (16) | 0.0102 (14) |
C13 | 0.0595 (18) | 0.066 (2) | 0.0538 (17) | −0.0075 (14) | 0.0174 (15) | 0.0150 (14) |
C14 | 0.065 (2) | 0.069 (2) | 0.0581 (18) | 0.0049 (16) | 0.0240 (16) | 0.0125 (15) |
C15 | 0.082 (2) | 0.080 (2) | 0.059 (2) | 0.0000 (19) | 0.0292 (18) | −0.0011 (17) |
C16 | 0.080 (2) | 0.100 (3) | 0.0503 (18) | −0.007 (2) | 0.0203 (17) | 0.0073 (19) |
C17 | 0.098 (3) | 0.070 (2) | 0.062 (2) | −0.014 (2) | 0.0081 (19) | 0.0199 (17) |
O1W | 0.102 (4) | 0.064 (2) | 0.081 (2) | −0.010 (2) | 0.029 (2) | 0.0169 (17) |
O2W | 0.18 (2) | 0.062 (7) | 0.093 (9) | 0.001 (8) | 0.047 (10) | 0.014 (6) |
F1A—C10 | 1.337 (5) | C4—C9 | 1.408 (4) |
F2A—C10 | 1.312 (6) | C4—C5 | 1.419 (4) |
F3A—C10 | 1.269 (5) | C5—C6 | 1.422 (4) |
F1B—C10 | 1.370 (7) | C6—C7 | 1.354 (4) |
F2B—C10 | 1.288 (8) | C6—C11 | 1.491 (4) |
F3B—C10 | 1.288 (8) | C7—C8 | 1.394 (5) |
F4—C11 | 1.328 (4) | C7—H7 | 0.93 |
F5—C11 | 1.328 (4) | C8—C9 | 1.357 (4) |
F6—C11 | 1.334 (4) | C8—H8 | 0.93 |
N1—C1 | 1.314 (3) | C9—H9 | 0.93 |
N1—C5 | 1.359 (3) | C12—C13 | 1.457 (4) |
N2—C3 | 1.365 (4) | C12—H12 | 0.93 |
N2—N3 | 1.367 (3) | C13—C14 | 1.384 (5) |
N2—H2N | 0.88 (3) | C13—C17 | 1.385 (4) |
N3—C12 | 1.268 (4) | C14—C15 | 1.363 (4) |
N4—C16 | 1.314 (5) | C14—H14 | 0.93 |
N4—C17 | 1.332 (4) | C15—C16 | 1.368 (5) |
C1—C2 | 1.383 (4) | C15—H15 | 0.93 |
C1—C10 | 1.505 (4) | C16—H16 | 0.93 |
C2—C3 | 1.377 (4) | C17—H17 | 0.93 |
C2—H2 | 0.93 | O1W—H1W | 0.83 (2) |
C3—C4 | 1.429 (4) | O1W—H2W | 0.81 (2) |
C1—N1—C5 | 116.2 (2) | F2B—C10—F1A | 63.3 (8) |
C3—N2—N3 | 117.6 (3) | F3B—C10—F1A | 77.7 (8) |
C3—N2—H2N | 124 (2) | F2A—C10—F1A | 100.2 (4) |
N3—N2—H2N | 118 (2) | F3A—C10—F1B | 46.4 (5) |
C12—N3—N2 | 117.5 (3) | F2B—C10—F1B | 97.8 (8) |
C16—N4—C17 | 116.9 (3) | F3B—C10—F1B | 91.8 (8) |
N1—C1—C2 | 126.4 (3) | F2A—C10—F1B | 69.6 (6) |
N1—C1—C10 | 114.4 (2) | F1A—C10—F1B | 140.0 (5) |
C2—C1—C10 | 119.2 (3) | F3A—C10—C1 | 115.4 (3) |
C3—C2—C1 | 118.5 (2) | F2B—C10—C1 | 111.6 (6) |
C3—C2—H2 | 120.7 | F3B—C10—C1 | 112.9 (7) |
C1—C2—H2 | 120.7 | F2A—C10—C1 | 110.3 (5) |
N2—C3—C2 | 120.9 (3) | F1A—C10—C1 | 113.2 (3) |
N2—C3—C4 | 120.8 (3) | F1B—C10—C1 | 106.5 (5) |
C2—C3—C4 | 118.3 (2) | F4—C11—F5 | 105.5 (3) |
C9—C4—C5 | 118.7 (2) | F4—C11—F6 | 105.0 (3) |
C9—C4—C3 | 123.8 (3) | F5—C11—F6 | 106.7 (3) |
C5—C4—C3 | 117.5 (2) | F4—C11—C6 | 113.9 (3) |
N1—C5—C4 | 123.2 (2) | F5—C11—C6 | 112.9 (3) |
N1—C5—C6 | 118.5 (2) | F6—C11—C6 | 112.1 (3) |
C4—C5—C6 | 118.4 (3) | N3—C12—C13 | 120.0 (3) |
C7—C6—C5 | 120.7 (3) | N3—C12—H12 | 120.0 |
C7—C6—C11 | 119.3 (3) | C13—C12—H12 | 120.0 |
C5—C6—C11 | 120.0 (3) | C14—C13—C17 | 116.4 (3) |
C6—C7—C8 | 120.8 (3) | C14—C13—C12 | 123.3 (3) |
C6—C7—H7 | 119.6 | C17—C13—C12 | 120.3 (3) |
C8—C7—H7 | 119.6 | C15—C14—C13 | 119.6 (3) |
C9—C8—C7 | 120.2 (3) | C15—C14—H14 | 120.2 |
C9—C8—H8 | 119.9 | C13—C14—H14 | 120.2 |
C7—C8—H8 | 119.9 | C14—C15—C16 | 119.1 (4) |
C8—C9—C4 | 121.2 (3) | C14—C15—H15 | 120.5 |
C8—C9—H9 | 119.4 | C16—C15—H15 | 120.5 |
C4—C9—H9 | 119.4 | N4—C16—C15 | 123.6 (3) |
F3A—C10—F2B | 51.7 (6) | N4—C16—H16 | 118.2 |
F3A—C10—F3B | 122.8 (7) | C15—C16—H16 | 118.2 |
F2B—C10—F3B | 129.4 (10) | N4—C17—C13 | 124.5 (4) |
F3A—C10—F2A | 108.2 (6) | N4—C17—H17 | 117.8 |
F2B—C10—F2A | 138.2 (7) | C13—C17—H17 | 117.8 |
F3B—C10—F2A | 23.7 (8) | H1W—O1W—H2W | 112 (4) |
F3A—C10—F1A | 108.5 (6) | ||
C3—N2—N3—C12 | 173.2 (3) | N1—C1—C10—F3A | 168.6 (8) |
C5—N1—C1—C2 | 1.0 (5) | C2—C1—C10—F3A | −9.6 (9) |
C5—N1—C1—C10 | −177.1 (3) | N1—C1—C10—F2B | 112.0 (9) |
N1—C1—C2—C3 | 0.3 (5) | C2—C1—C10—F2B | −66.2 (10) |
C10—C1—C2—C3 | 178.2 (3) | N1—C1—C10—F3B | −43.1 (9) |
N3—N2—C3—C2 | −7.4 (4) | C2—C1—C10—F3B | 138.7 (8) |
N3—N2—C3—C4 | 173.6 (3) | N1—C1—C10—F2A | −68.5 (5) |
C1—C2—C3—N2 | 179.6 (3) | C2—C1—C10—F2A | 113.3 (5) |
C1—C2—C3—C4 | −1.3 (4) | N1—C1—C10—F1A | 42.9 (4) |
N2—C3—C4—C9 | 0.1 (5) | C2—C1—C10—F1A | −135.3 (4) |
C2—C3—C4—C9 | −179.0 (3) | N1—C1—C10—F1B | −142.3 (6) |
N2—C3—C4—C5 | −179.9 (3) | C2—C1—C10—F1B | 39.5 (7) |
C2—C3—C4—C5 | 1.0 (4) | C7—C6—C11—F4 | −120.2 (3) |
C1—N1—C5—C4 | −1.3 (4) | C5—C6—C11—F4 | 61.1 (4) |
C1—N1—C5—C6 | 178.2 (3) | C7—C6—C11—F5 | 119.5 (4) |
C9—C4—C5—N1 | −179.7 (3) | C5—C6—C11—F5 | −59.1 (4) |
C3—C4—C5—N1 | 0.3 (4) | C7—C6—C11—F6 | −1.1 (5) |
C9—C4—C5—C6 | 0.8 (4) | C5—C6—C11—F6 | −179.7 (3) |
C3—C4—C5—C6 | −179.1 (3) | N2—N3—C12—C13 | 176.9 (3) |
N1—C5—C6—C7 | 179.1 (3) | N3—C12—C13—C14 | −8.3 (5) |
C4—C5—C6—C7 | −1.4 (5) | N3—C12—C13—C17 | 170.9 (4) |
N1—C5—C6—C11 | −2.3 (4) | C17—C13—C14—C15 | −0.3 (5) |
C4—C5—C6—C11 | 177.2 (3) | C12—C13—C14—C15 | 179.0 (3) |
C5—C6—C7—C8 | 1.1 (5) | C13—C14—C15—C16 | 1.0 (5) |
C11—C6—C7—C8 | −177.5 (3) | C17—N4—C16—C15 | −0.5 (6) |
C6—C7—C8—C9 | −0.1 (6) | C14—C15—C16—N4 | −0.6 (6) |
C7—C8—C9—C4 | −0.5 (5) | C16—N4—C17—C13 | 1.3 (6) |
C5—C4—C9—C8 | 0.1 (5) | C14—C13—C17—N4 | −0.9 (6) |
C3—C4—C9—C8 | −180.0 (3) | C12—C13—C17—N4 | 179.8 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2N···O1W | 0.88 (3) | 2.04 (3) | 2.914 (5) | 169 (3) |
O1W—H1W···N4i | 0.83 (5) | 2.06 (6) | 2.855 (5) | 163 (7) |
C9—H9···O1W | 0.93 | 2.42 | 3.331 (5) | 167 |
Symmetry code: (i) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | C17H10F6N4·H2O |
Mr | 402.31 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 295 |
a, b, c (Å) | 21.103 (4), 15.120 (3), 12.537 (3) |
β (°) | 118.633 (3) |
V (Å3) | 3511.1 (13) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.14 |
Crystal size (mm) | 0.22 × 0.15 × 0.12 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | ψ scan (SADABS; Bruker, 2001) |
Tmin, Tmax | 0.975, 0.983 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13267, 3416, 2309 |
Rint | 0.035 |
(sin θ/λ)max (Å−1) | 0.616 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.064, 0.169, 1.04 |
No. of reflections | 3416 |
No. of parameters | 301 |
No. of restraints | 54 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.26, −0.25 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2N···O1W | 0.88 (3) | 2.04 (3) | 2.914 (5) | 169 (3) |
O1W—H1W···N4i | 0.83 (5) | 2.06 (6) | 2.855 (5) | 163 (7) |
C9—H9···O1W | 0.93 | 2.42 | 3.331 (5) | 167 |
Symmetry code: (i) −x+1, −y+1, −z. |
Acknowledgements
The authors thank the DST, India, for the funding under DST–FIST (Level II) for the X-ray diffraction facility at SSCU, IISc, Bangalore.
References
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2,8-Bis(trifluoromethyl)quinolin-4-yl]-(2-piperidyl)methanol (mefloquin) is a popular antimalarial drug. It also possesses important structural features required for antimicrobial activity (Mao et al. 2009; Bermudez et al. 2004; Jayaprakash et al. 2006). Quinoline is an essential structural unit found in mefloquin and recently developed antimycobacterial drugs (Andries et al. 2005). Thus, quinoline derivatives are good lead molecules to further develop drug candidates against mycobacterium tuberculosis and as antibacterial agents. On the basis of these observations we have synthesized few quinoline derivatives, in which a hydrazone group has been attached at the 4th position of the mefloquin ring system, expecting that these newly designed molecules would exhibit some antibacterial activity. The crystal structures of the mefloquine base and its salt complexes have been reported (Skörska et al. 2005). Earlier, we reported the crystal structure of 3,4-dimethoxybenzaldehyde [2,8-bis(trifluoromethyl)quinolin-4-yl]hydrazone (Al-eryani et al., 2010). We report here the crystal structure of the title compound.
The asymmetric unit of the title compound contains one nicotinaldehyde [2,8-bis(trifluoromethyl)quinolin-4-yl]hydrazone molecule and one water molecule (Fig. 1). The dihedral angle [21.3 (1)°] between the quinoline ring system and the pyridine ring indicates that these two systems are non coplanar.
In the crystal structure, intermolecular O—H···N, N—H···O and C—H···O hydrogen bonds (Table 1) are observed. In addition, a weak π–π interaction is observed between N4/C13–C17 pyridine ring at (-x, y, 1/2-z) and N1/C1–C5 pyridine ring of quinoline at (x,y,z), with a centroid-centroid distance of 3.650 (3) Å.