organic compounds
Salicylaldehyde–4-(dimethylamino)pyridine (1/1)
aResearch Centre of Bioorganic Chemistry, Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand
*Correspondence e-mail: nongnuj.j@chula.ac.th
In the title compound, C7H10N2·C7H6O2, the components are linked by an O—H⋯N hydrogen bond. The mean planes of two molecules form a dihedral angle of 78.68 (5)°. The crystal packing exhibits weak non-classical C—H⋯O contacts.
Related literature
For background to hydrogen bonding in crystal engineering, see: Bosch (2010); Desiraju (1989); Lehn (1995). For related structures, see: Bosch (2010); Vembu et al. (2003); Lo & Ng (2009).
Experimental
Crystal data
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Refinement
|
Data collection: APEX2 (Bruker, 2008); cell SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97.
Supporting information
https://doi.org/10.1107/S1600536810034185/cv2756sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810034185/cv2756Isup2.hkl
The title cocrystal was crystallized by slow evaporation from the refluxed mixture of an equimolar solution of salicylaldehyde and 4-(dimethylamino)pyridine in a solution of methanol.
All H-atoms were geometrically positioned and refined using a riding model, with C—H = 0.93 Å (aromatic), 0.98 Å (CH3) and O–H = 0.82 Å, and Uiso(H) = 1.2Ueq (C) for aromatic and 1.5Ueq for O and Cmethyl.
Hydrogen bonding is the most important and the essential tool for both crystal engineering and supramolecular chemistry (Bosch, 2010; Desiraju, 1989 & Lehn, 1995). The non-classical C—H···N hydrogen bonds in pyridine and pyrimidine derivatives have remarkable potentials and patterns (Bosch, 2010; Desiraju, 1989; Lehn, 1995; Lo & Ng, 2009 & Vembu et al., 2003;). In order to investigate the hydrogen bonding patterns of 4-(dimethylamino)pyridine, the co-crystals with various derivatives of benzaldehyde were prepared.
We report here the structure of the title
compound (Fig.1), formed from salicylaldehyde and 4-(dimethylamino)pyridine. The contains one molecule of salicylaldehyde and one molecule of 4-(dimethylamino)pyridine linked by O—H···N hydrogen bond (Table 1). The mean planes of two molecules form a dihedral angle of 78.68 (5)°. The crystal packing exhibits weak non-classical C—H···O contacts (Table 1).For background to hydrogen bonding in crystal engineering, see: Bosch (2010); Desiraju (1989); Lehn (1995). For related structures, see: Bosch (2010); Vembu et al. (2003); Lo & Ng (2009).
Data collection: APEX2 (Bruker, 2008); cell
SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXS97 (Sheldrick, 2008).C7H10N2·C7H6O2 | Z = 2 |
Mr = 244.29 | F(000) = 260 |
Triclinic, P1 | Dx = 1.255 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.540 (3) Å | Cell parameters from 1563 reflections |
b = 8.473 (3) Å | θ = 2.8–27.8° |
c = 10.413 (4) Å | µ = 0.09 mm−1 |
α = 85.370 (11)° | T = 296 K |
β = 77.371 (10)° | Prism, yellow |
γ = 87.203 (10)° | 0.4 × 0.4 × 0.38 mm |
V = 646.7 (4) Å3 |
Bruker SMART APEXII CCD area-detector diffractometer | 2913 independent reflections |
Radiation source: Mo Kα | 1882 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.02 |
φ and ω scans | θmax = 28.3°, θmin = 2.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | h = −10→9 |
Tmin = 0.967, Tmax = 0.968 | k = −5→11 |
4199 measured reflections | l = −13→13 |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.049 | w = 1/[σ2(Fo2) + (0.0815P)2 + 0.0644P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.163 | (Δ/σ)max < 0.001 |
S = 1.01 | Δρmax = 0.20 e Å−3 |
2913 reflections | Δρmin = −0.15 e Å−3 |
166 parameters |
C7H10N2·C7H6O2 | γ = 87.203 (10)° |
Mr = 244.29 | V = 646.7 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.540 (3) Å | Mo Kα radiation |
b = 8.473 (3) Å | µ = 0.09 mm−1 |
c = 10.413 (4) Å | T = 296 K |
α = 85.370 (11)° | 0.4 × 0.4 × 0.38 mm |
β = 77.371 (10)° |
Bruker SMART APEXII CCD area-detector diffractometer | 2913 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | 1882 reflections with I > 2σ(I) |
Tmin = 0.967, Tmax = 0.968 | Rint = 0.02 |
4199 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | 0 restraints |
wR(F2) = 0.163 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.20 e Å−3 |
2913 reflections | Δρmin = −0.15 e Å−3 |
166 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.8429 (3) | 0.2372 (2) | 0.5097 (2) | 0.0720 (5) | |
H1 | 0.868 | 0.1401 | 0.5513 | 0.086* | |
C2 | 0.7810 (3) | 0.3587 (2) | 0.58701 (17) | 0.0638 (5) | |
H2 | 0.7635 | 0.3422 | 0.6782 | 0.077* | |
C3 | 0.7433 (2) | 0.5084 (2) | 0.52993 (15) | 0.0521 (4) | |
C4 | 0.7680 (2) | 0.5182 (2) | 0.39168 (16) | 0.0604 (4) | |
H4 | 0.7426 | 0.6132 | 0.3469 | 0.072* | |
C5 | 0.8288 (3) | 0.3893 (3) | 0.32350 (18) | 0.0693 (5) | |
H5 | 0.8428 | 0.4003 | 0.2323 | 0.083* | |
C6 | 0.6562 (3) | 0.6217 (3) | 0.74452 (19) | 0.0879 (7) | |
H6A | 0.5548 | 0.5552 | 0.7795 | 0.132* | |
H6B | 0.6298 | 0.725 | 0.777 | 0.132* | |
H6C | 0.7624 | 0.5762 | 0.7717 | 0.132* | |
C7 | 0.6590 (3) | 0.7888 (3) | 0.5390 (2) | 0.0798 (6) | |
H7A | 0.7616 | 0.8131 | 0.4686 | 0.12* | |
H7B | 0.6445 | 0.8672 | 0.6024 | 0.12* | |
H7C | 0.5513 | 0.7885 | 0.5041 | 0.12* | |
C8 | 0.9510 (2) | −0.18638 (19) | 0.10290 (14) | 0.0500 (4) | |
C9 | 0.8248 (3) | −0.2663 (2) | 0.05460 (16) | 0.0603 (5) | |
H9 | 0.8641 | −0.3511 | 0.0029 | 0.072* | |
C10 | 0.6437 (3) | −0.2223 (3) | 0.08184 (19) | 0.0724 (5) | |
H10 | 0.5604 | −0.2764 | 0.0493 | 0.087* | |
C11 | 0.5875 (3) | −0.0964 (3) | 0.1584 (2) | 0.0754 (6) | |
H11 | 0.4652 | −0.065 | 0.1763 | 0.09* | |
C12 | 0.7082 (2) | −0.0158 (2) | 0.20895 (18) | 0.0654 (5) | |
H12 | 0.6669 | 0.0687 | 0.2605 | 0.078* | |
C13 | 0.8914 (2) | −0.06070 (19) | 0.18288 (14) | 0.0515 (4) | |
C14 | 1.1435 (3) | −0.2309 (2) | 0.06846 (17) | 0.0631 (5) | |
H14 | 1.2235 | −0.1669 | 0.0951 | 0.076* | |
N1 | 0.8703 (2) | 0.2475 (2) | 0.37777 (17) | 0.0724 (5) | |
N2 | 0.6887 (2) | 0.63491 (19) | 0.60206 (13) | 0.0636 (4) | |
O1 | 1.2084 (2) | −0.34318 (19) | 0.00855 (16) | 0.0891 (5) | |
O2 | 1.01269 (17) | 0.01257 (16) | 0.23295 (13) | 0.0670 (4) | |
H2A | 0.961 | 0.0844 | 0.2765 | 0.101* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0818 (13) | 0.0592 (12) | 0.0816 (13) | −0.0101 (9) | −0.0299 (10) | −0.0061 (9) |
C2 | 0.0763 (12) | 0.0654 (12) | 0.0532 (9) | −0.0126 (9) | −0.0203 (8) | −0.0007 (8) |
C3 | 0.0488 (8) | 0.0622 (11) | 0.0477 (8) | −0.0119 (7) | −0.0121 (7) | −0.0073 (7) |
C4 | 0.0678 (10) | 0.0654 (11) | 0.0503 (9) | −0.0068 (8) | −0.0163 (8) | −0.0055 (8) |
C5 | 0.0764 (12) | 0.0813 (15) | 0.0542 (10) | −0.0080 (10) | −0.0162 (9) | −0.0188 (9) |
C6 | 0.1038 (16) | 0.1054 (19) | 0.0546 (11) | 0.0003 (13) | −0.0119 (10) | −0.0232 (11) |
C7 | 0.0877 (14) | 0.0677 (14) | 0.0813 (13) | 0.0053 (10) | −0.0114 (11) | −0.0126 (10) |
C8 | 0.0633 (10) | 0.0484 (9) | 0.0393 (7) | −0.0072 (7) | −0.0137 (7) | 0.0023 (6) |
C9 | 0.0776 (12) | 0.0578 (11) | 0.0483 (9) | −0.0128 (8) | −0.0154 (8) | −0.0085 (7) |
C10 | 0.0688 (12) | 0.0883 (15) | 0.0667 (11) | −0.0241 (10) | −0.0209 (9) | −0.0136 (10) |
C11 | 0.0588 (11) | 0.0952 (16) | 0.0755 (12) | −0.0095 (10) | −0.0163 (9) | −0.0173 (11) |
C12 | 0.0636 (11) | 0.0681 (12) | 0.0668 (11) | −0.0022 (9) | −0.0141 (8) | −0.0187 (9) |
C13 | 0.0615 (10) | 0.0502 (9) | 0.0455 (8) | −0.0089 (7) | −0.0170 (7) | −0.0008 (7) |
C14 | 0.0698 (11) | 0.0637 (12) | 0.0600 (10) | −0.0001 (9) | −0.0218 (8) | −0.0105 (8) |
N1 | 0.0745 (10) | 0.0704 (12) | 0.0794 (11) | −0.0065 (8) | −0.0232 (8) | −0.0264 (8) |
N2 | 0.0734 (9) | 0.0667 (10) | 0.0507 (8) | −0.0049 (7) | −0.0103 (7) | −0.0114 (7) |
O1 | 0.0889 (10) | 0.0822 (11) | 0.1002 (11) | 0.0161 (8) | −0.0239 (8) | −0.0325 (8) |
O2 | 0.0665 (8) | 0.0665 (9) | 0.0756 (8) | −0.0047 (6) | −0.0244 (6) | −0.0235 (6) |
C1—N1 | 1.340 (3) | C7—H7B | 0.96 |
C1—C2 | 1.359 (3) | C7—H7C | 0.96 |
C1—H1 | 0.93 | C8—C9 | 1.394 (2) |
C2—C3 | 1.400 (3) | C8—C13 | 1.401 (2) |
C2—H2 | 0.93 | C8—C14 | 1.455 (3) |
C3—N2 | 1.355 (2) | C9—C10 | 1.372 (3) |
C3—C4 | 1.407 (2) | C9—H9 | 0.93 |
C4—C5 | 1.357 (3) | C10—C11 | 1.378 (3) |
C4—H4 | 0.93 | C10—H10 | 0.93 |
C5—N1 | 1.339 (3) | C11—C12 | 1.378 (3) |
C5—H5 | 0.93 | C11—H11 | 0.93 |
C6—N2 | 1.446 (2) | C12—C13 | 1.389 (3) |
C6—H6A | 0.96 | C12—H12 | 0.93 |
C6—H6B | 0.96 | C13—O2 | 1.3452 (18) |
C6—H6C | 0.96 | C14—O1 | 1.205 (2) |
C7—N2 | 1.442 (3) | C14—H14 | 0.93 |
C7—H7A | 0.96 | O2—H2A | 0.82 |
N1—C1—C2 | 124.69 (19) | C9—C8—C13 | 119.44 (16) |
N1—C1—H1 | 117.7 | C9—C8—C14 | 120.36 (16) |
C2—C1—H1 | 117.7 | C13—C8—C14 | 120.19 (14) |
C1—C2—C3 | 120.29 (17) | C10—C9—C8 | 121.25 (17) |
C1—C2—H2 | 119.9 | C10—C9—H9 | 119.4 |
C3—C2—H2 | 119.9 | C8—C9—H9 | 119.4 |
N2—C3—C2 | 122.62 (15) | C9—C10—C11 | 118.68 (17) |
N2—C3—C4 | 122.36 (16) | C9—C10—H10 | 120.7 |
C2—C3—C4 | 115.02 (16) | C11—C10—H10 | 120.7 |
C5—C4—C3 | 120.10 (18) | C10—C11—C12 | 121.63 (19) |
C5—C4—H4 | 120 | C10—C11—H11 | 119.2 |
C3—C4—H4 | 120 | C12—C11—H11 | 119.2 |
N1—C5—C4 | 124.86 (17) | C11—C12—C13 | 119.98 (18) |
N1—C5—H5 | 117.6 | C11—C12—H12 | 120 |
C4—C5—H5 | 117.6 | C13—C12—H12 | 120 |
N2—C6—H6A | 109.5 | O2—C13—C12 | 121.78 (16) |
N2—C6—H6B | 109.5 | O2—C13—C8 | 119.24 (15) |
H6A—C6—H6B | 109.5 | C12—C13—C8 | 118.99 (15) |
N2—C6—H6C | 109.5 | O1—C14—C8 | 125.87 (17) |
H6A—C6—H6C | 109.5 | O1—C14—H14 | 117.1 |
H6B—C6—H6C | 109.5 | C8—C14—H14 | 117.1 |
N2—C7—H7A | 109.5 | C5—N1—C1 | 114.99 (16) |
N2—C7—H7B | 109.5 | C3—N2—C7 | 120.92 (15) |
H7A—C7—H7B | 109.5 | C3—N2—C6 | 121.81 (17) |
N2—C7—H7C | 109.5 | C7—N2—C6 | 117.26 (16) |
H7A—C7—H7C | 109.5 | C13—O2—H2A | 109.5 |
H7B—C7—H7C | 109.5 | ||
N1—C1—C2—C3 | −1.0 (3) | C9—C8—C13—O2 | 177.74 (14) |
C1—C2—C3—N2 | −177.17 (16) | C14—C8—C13—O2 | −3.5 (2) |
C1—C2—C3—C4 | 2.3 (2) | C9—C8—C13—C12 | −1.9 (2) |
N2—C3—C4—C5 | 177.77 (16) | C14—C8—C13—C12 | 176.90 (16) |
C2—C3—C4—C5 | −1.7 (2) | C9—C8—C14—O1 | −6.8 (3) |
C3—C4—C5—N1 | −0.3 (3) | C13—C8—C14—O1 | 174.44 (18) |
C13—C8—C9—C10 | 1.3 (2) | C4—C5—N1—C1 | 1.7 (3) |
C14—C8—C9—C10 | −177.51 (16) | C2—C1—N1—C5 | −1.1 (3) |
C8—C9—C10—C11 | 0.1 (3) | C2—C3—N2—C7 | 177.21 (17) |
C9—C10—C11—C12 | −0.8 (3) | C4—C3—N2—C7 | −2.2 (3) |
C10—C11—C12—C13 | 0.2 (3) | C2—C3—N2—C6 | −3.3 (3) |
C11—C12—C13—O2 | −178.43 (16) | C4—C3—N2—C6 | 177.28 (17) |
C11—C12—C13—C8 | 1.2 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2A···N1 | 0.82 | 1.82 | 2.637 (2) | 174 |
C9—H9···O1i | 0.93 | 2.69 | 3.456 (3) | 140 |
C5—H5···O1ii | 0.93 | 2.7 | 3.583 (3) | 158 |
Symmetry codes: (i) −x+2, −y−1, −z; (ii) −x+2, −y, −z. |
Experimental details
Crystal data | |
Chemical formula | C7H10N2·C7H6O2 |
Mr | 244.29 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 7.540 (3), 8.473 (3), 10.413 (4) |
α, β, γ (°) | 85.370 (11), 77.371 (10), 87.203 (10) |
V (Å3) | 646.7 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.4 × 0.4 × 0.38 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2008) |
Tmin, Tmax | 0.967, 0.968 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4199, 2913, 1882 |
Rint | 0.02 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.163, 1.01 |
No. of reflections | 2913 |
No. of parameters | 166 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.20, −0.15 |
Computer programs: APEX2 (Bruker, 2008), SAINT (Bruker, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2A···N1 | 0.82 | 1.82 | 2.637 (2) | 173.6 |
C9—H9···O1i | 0.93 | 2.69 | 3.456 (3) | 140.1 |
C5—H5···O1ii | 0.93 | 2.7 | 3.583 (3) | 158.1 |
Symmetry codes: (i) −x+2, −y−1, −z; (ii) −x+2, −y, −z. |
Acknowledgements
This work was supported by the Research Funds from the Faculty of Science (A1B1), the Thailand Research Fund (RSA4680016) to NM, and the Thai Government Stimulus Package 2 (TKK2555) under the Project for Establishment of Comprehensive Center for Innovative Food, Health Products and Agrigulture and Center for Petroleum Petrochemicals and Advanced Materials.
References
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Desiraju, G. R. (1989). Crystal Engineering: The Design of Organic Solids. Amsterdam: Elsevier. Google Scholar
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Hydrogen bonding is the most important and the essential tool for both crystal engineering and supramolecular chemistry (Bosch, 2010; Desiraju, 1989 & Lehn, 1995). The non-classical C—H···N hydrogen bonds in pyridine and pyrimidine derivatives have remarkable potentials and patterns (Bosch, 2010; Desiraju, 1989; Lehn, 1995; Lo & Ng, 2009 & Vembu et al., 2003;). In order to investigate the hydrogen bonding patterns of 4-(dimethylamino)pyridine, the co-crystals with various derivatives of benzaldehyde were prepared.
We report here the structure of the title co-crystal compound (Fig.1), formed from salicylaldehyde and 4-(dimethylamino)pyridine. The asymmetric unit contains one molecule of salicylaldehyde and one molecule of 4-(dimethylamino)pyridine linked by O—H···N hydrogen bond (Table 1). The mean planes of two molecules form a dihedral angle of 78.68 (5)°. The crystal packing exhibits weak non-classical C—H···O contacts (Table 1).