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ISSN: 2056-9890

2-(4-Meth­­oxy­phen­­oxy)pyrazine

aDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: edward.tiekink@gmail.com

(Received 6 August 2010; accepted 9 August 2010; online 18 August 2010)

In the title compound, C11H10N2O2, the aromatic rings are almost orthogonal to each other [dihedral angle = 86.97 (8)°], with the benzene ring orientated to face one of the pyrazine N atoms. In the crystal, centrosymmetrically related pairs are connected via pairs of C—H⋯π inter­actions and the dimeric units thus formed pack into undulating layers that stack along the a axis.

Related literature

For background to the fluorescence properties of compounds related to the title compound, see: Kawai et al. (2001[Kawai, M., Lee, M. J., Evans, K. O. & Norlund, T. (2001). J. Fluoresc. 11, 23-32.]); Abdullah (2005[Abdullah, Z. (2005). Int. J. Chem. Sci. 3, 9-15.]). For a related structure, see: Nasir et al. (2010[Nasir, S. B., Abdullah, Z., Fairuz, Z. A., Ng, S. W. & Tiekink, E. R. T. (2010). Acta Cryst. E66, o2187.]).

[Scheme 1]

Experimental

Crystal data
  • C11H10N2O2

  • Mr = 202.21

  • Monoclinic, P 21 /c

  • a = 5.8783 (2) Å

  • b = 10.9298 (4) Å

  • c = 15.6430 (6) Å

  • β = 97.109 (2)°

  • V = 997.32 (6) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.10 mm−1

  • T = 293 K

  • 0.35 × 0.20 × 0.10 mm

Data collection
  • Bruker SMART APEX CCD diffractometer

  • 5515 measured reflections

  • 1743 independent reflections

  • 1244 reflections with I > 2σ(I)

  • Rint = 0.026

Refinement
  • R[F2 > 2σ(F2)] = 0.036

  • wR(F2) = 0.100

  • S = 1.05

  • 1743 reflections

  • 138 parameters

  • H-atom parameters constrained

  • Δρmax = 0.13 e Å−3

  • Δρmin = −0.12 e Å−3

Table 1
Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the N1,N2,C1–C4 ring.

D—H⋯A D—H H⋯A DA D—H⋯A
C9—H9⋯Cg1i 0.93 2.87 3.6326 (18) 140
Symmetry code: (i) -x+1, -y+1, -z+1.

Data collection: APEX2 (Bruker, 2009[Bruker (2009). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.]); cell refinement: SAINT (Bruker, 2009[Bruker (2009). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.]); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); molecular graphics: ORTEP-3 (Farrugia, 1997[Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.]) and DIAMOND (Brandenburg, 2006[Brandenburg, K. (2006). DIAMOND. Crystal Impact GbR, Bonn, Germany.]); software used to prepare material for publication: publCIF (Westrip, 2010[Westrip, S. P. (2010). J. Appl. Cryst. 43, 920-925.]).

Supporting information


Comment top

On-going structural studies of heterocyclic N-containing derivatives (Nasir et al., 2010) are motivated by an investigation of their fluorescence properties (Kawai et al., 2001; Abdullah, 2005). In this connection, the title pyrazine derivative, (I), was investigated.

With respect to the benzene ring, the pyrazine ring occupies an orthogonal position with the dihedral angle formed between the rings being 86.97 (8) °. The least-squares plane through the pyrazine ring is aligned along the C5···C8 axis of the benzene ring, an arrangement that allows the benzene ring to be directed towards the pyrazine-N1 atom. The C11–O2–C8–C7 torsion angle of -176.93 (14) ° indicates the methoxy group is co-planar with the benzene ring to which it is attached.

The most prominent intermolecular interaction operating in the crystal structure of (I) is of the type C–H···π. This occurs between centrosymmetrically related molecules and involves a benzene-H and the pyrazine ring, Table 1. The dimeric aggregates pack into undulating layers in the bc plane, Fig. 2, which stack along the a axis, Fig. 3.

Related literature top

For background to the fluorescence properties of compounds related to the title compound, see: Kawai et al. (2001); Abdullah (2005). For a related structure, see: Nasir et al. (2010).

Experimental top

2-Chloropyrazine (2.5 g, 45 mmol) and 4-methoxyphenol (5.6 g, 45 mmol) were refluxed in THF (10 ml) for 5 h. The residue was dissolved in minimum of water (10 ml) and extracted with ether (3 x 10 ml). The ethereal layer was washed with water and dried over anyhydrous sodium sulfate. Recrystallization from ethyl acetate yielded colourless blocks of (I) after a few days.

Refinement top

Carbon-bound H-atoms were placed in calculated positions (C—H 0.93 to 0.96 Å) and were included in the refinement in the riding model approximation, with Uiso(H) set to 1.2 to 1.5Uequiv(C). Some disorder was noted in the benzene ring (manifested in the shorter than usual average C–C bond distance of 1.37 Å). However, multiple sites were not resolved for this ring.

Structure description top

On-going structural studies of heterocyclic N-containing derivatives (Nasir et al., 2010) are motivated by an investigation of their fluorescence properties (Kawai et al., 2001; Abdullah, 2005). In this connection, the title pyrazine derivative, (I), was investigated.

With respect to the benzene ring, the pyrazine ring occupies an orthogonal position with the dihedral angle formed between the rings being 86.97 (8) °. The least-squares plane through the pyrazine ring is aligned along the C5···C8 axis of the benzene ring, an arrangement that allows the benzene ring to be directed towards the pyrazine-N1 atom. The C11–O2–C8–C7 torsion angle of -176.93 (14) ° indicates the methoxy group is co-planar with the benzene ring to which it is attached.

The most prominent intermolecular interaction operating in the crystal structure of (I) is of the type C–H···π. This occurs between centrosymmetrically related molecules and involves a benzene-H and the pyrazine ring, Table 1. The dimeric aggregates pack into undulating layers in the bc plane, Fig. 2, which stack along the a axis, Fig. 3.

For background to the fluorescence properties of compounds related to the title compound, see: Kawai et al. (2001); Abdullah (2005). For a related structure, see: Nasir et al. (2010).

Computing details top

Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).

Figures top
[Figure 1] Fig. 1. The molecular structure of (I) showing displacement ellipsoids at the 35% probability level.
[Figure 2] Fig. 2. Undulating supramolecular layer in (I) showing C–H···π interactions (purple dashed lines) between centrosymmetrically related molecules.
[Figure 3] Fig. 3. Unit-cell contents shown in projection down the c axis in (I), highlighting the stacking of undulating layers. The C–H···π interaction are shown as purple dashed lines.
2-(4-Methoxyphenoxy)pyrazine top
Crystal data top
C11H10N2O2F(000) = 424
Mr = 202.21Dx = 1.347 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1293 reflections
a = 5.8783 (2) Åθ = 2.3–22.4°
b = 10.9298 (4) ŵ = 0.10 mm1
c = 15.6430 (6) ÅT = 293 K
β = 97.109 (2)°Block, colourless
V = 997.32 (6) Å30.35 × 0.20 × 0.10 mm
Z = 4
Data collection top
Bruker SMART APEX CCD
diffractometer
1244 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.026
Graphite monochromatorθmax = 25.0°, θmin = 2.3°
ω scansh = 66
5515 measured reflectionsk = 1212
1743 independent reflectionsl = 1818
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.036H-atom parameters constrained
wR(F2) = 0.100 w = 1/[σ2(Fo2) + (0.0486P)2 + 0.0504P]
where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
1743 reflectionsΔρmax = 0.13 e Å3
138 parametersΔρmin = 0.12 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.042 (4)
Crystal data top
C11H10N2O2V = 997.32 (6) Å3
Mr = 202.21Z = 4
Monoclinic, P21/cMo Kα radiation
a = 5.8783 (2) ŵ = 0.10 mm1
b = 10.9298 (4) ÅT = 293 K
c = 15.6430 (6) Å0.35 × 0.20 × 0.10 mm
β = 97.109 (2)°
Data collection top
Bruker SMART APEX CCD
diffractometer
1244 reflections with I > 2σ(I)
5515 measured reflectionsRint = 0.026
1743 independent reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0360 restraints
wR(F2) = 0.100H-atom parameters constrained
S = 1.05Δρmax = 0.13 e Å3
1743 reflectionsΔρmin = 0.12 e Å3
138 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.80138 (19)0.41576 (11)0.38163 (8)0.0650 (4)
O20.0132 (2)0.59432 (11)0.19506 (8)0.0638 (4)
N10.6059 (2)0.26379 (12)0.44535 (9)0.0494 (4)
N21.0286 (2)0.18218 (14)0.52555 (9)0.0599 (4)
C10.7989 (3)0.31704 (15)0.43404 (10)0.0442 (4)
C21.0109 (3)0.27760 (17)0.47408 (11)0.0544 (5)
H21.14260.31970.46420.065*
C30.8320 (3)0.12604 (17)0.53716 (12)0.0579 (5)
H30.83640.05780.57290.069*
C40.6268 (3)0.16632 (15)0.49808 (12)0.0559 (5)
H40.49480.12470.50820.067*
C50.5920 (3)0.45725 (15)0.33748 (11)0.0489 (4)
C60.5262 (3)0.41868 (15)0.25481 (12)0.0548 (5)
H60.61220.36030.22990.066*
C70.3328 (3)0.46665 (16)0.20906 (11)0.0554 (5)
H70.28810.44070.15290.066*
C80.2035 (3)0.55333 (14)0.24574 (10)0.0458 (4)
C90.2718 (3)0.59135 (15)0.32910 (11)0.0516 (5)
H90.18630.64940.35470.062*
C100.4674 (3)0.54303 (16)0.37434 (10)0.0548 (5)
H100.51450.56920.43030.066*
C110.1195 (3)0.68815 (16)0.22838 (12)0.0637 (5)
H11A0.25090.70590.18750.096*
H11B0.02780.76060.23860.096*
H11C0.16910.66110.28150.096*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0391 (7)0.0747 (9)0.0790 (9)0.0056 (6)0.0008 (6)0.0292 (7)
O20.0585 (8)0.0683 (8)0.0606 (8)0.0168 (6)0.0080 (6)0.0020 (6)
N10.0386 (8)0.0495 (8)0.0588 (9)0.0018 (6)0.0009 (6)0.0061 (7)
N20.0492 (9)0.0715 (10)0.0566 (9)0.0120 (8)0.0032 (7)0.0042 (8)
C10.0373 (9)0.0497 (10)0.0447 (9)0.0013 (7)0.0010 (7)0.0008 (8)
C20.0382 (10)0.0698 (12)0.0539 (10)0.0005 (8)0.0003 (8)0.0011 (10)
C30.0598 (12)0.0538 (11)0.0584 (11)0.0097 (9)0.0007 (9)0.0081 (9)
C40.0482 (11)0.0502 (10)0.0682 (12)0.0001 (8)0.0035 (9)0.0089 (9)
C50.0404 (10)0.0500 (10)0.0553 (10)0.0039 (8)0.0028 (8)0.0146 (9)
C60.0483 (11)0.0525 (11)0.0641 (11)0.0066 (8)0.0086 (9)0.0053 (9)
C70.0571 (12)0.0596 (11)0.0484 (10)0.0020 (9)0.0018 (8)0.0104 (9)
C80.0450 (10)0.0440 (9)0.0476 (9)0.0007 (7)0.0026 (8)0.0036 (8)
C90.0553 (11)0.0511 (10)0.0490 (10)0.0072 (8)0.0082 (8)0.0028 (8)
C100.0591 (11)0.0640 (11)0.0401 (9)0.0019 (9)0.0017 (8)0.0008 (9)
C110.0519 (11)0.0621 (11)0.0772 (13)0.0109 (9)0.0088 (10)0.0112 (10)
Geometric parameters (Å, º) top
O1—C11.3563 (19)C5—C101.361 (2)
O1—C51.4096 (19)C5—C61.370 (2)
O2—C81.3639 (18)C6—C71.371 (2)
O2—C111.426 (2)C6—H60.9300
N1—C11.3062 (19)C7—C81.383 (2)
N1—C41.344 (2)C7—H70.9300
N2—C21.314 (2)C8—C91.380 (2)
N2—C31.341 (2)C9—C101.378 (2)
C1—C21.392 (2)C9—H90.9300
C2—H20.9300C10—H100.9300
C3—C41.357 (2)C11—H11A0.9600
C3—H30.9300C11—H11B0.9600
C4—H40.9300C11—H11C0.9600
C1—O1—C5118.56 (12)C5—C6—H6120.2
C8—O2—C11118.05 (13)C7—C6—H6120.2
C1—N1—C4114.95 (14)C6—C7—C8120.56 (16)
C2—N2—C3116.22 (15)C6—C7—H7119.7
N1—C1—O1120.72 (14)C8—C7—H7119.7
N1—C1—C2123.03 (16)O2—C8—C9124.90 (15)
O1—C1—C2116.26 (14)O2—C8—C7115.92 (15)
N2—C2—C1121.37 (16)C9—C8—C7119.17 (16)
N2—C2—H2119.3C10—C9—C8119.77 (15)
C1—C2—H2119.3C10—C9—H9120.1
N2—C3—C4121.60 (17)C8—C9—H9120.1
N2—C3—H3119.2C5—C10—C9120.31 (16)
C4—C3—H3119.2C5—C10—H10119.8
N1—C4—C3122.83 (16)C9—C10—H10119.8
N1—C4—H4118.6O2—C11—H11A109.5
C3—C4—H4118.6O2—C11—H11B109.5
C10—C5—C6120.54 (16)H11A—C11—H11B109.5
C10—C5—O1119.79 (16)O2—C11—H11C109.5
C6—C5—O1119.42 (16)H11A—C11—H11C109.5
C5—C6—C7119.64 (16)H11B—C11—H11C109.5
C4—N1—C1—O1179.38 (14)C10—C5—C6—C70.2 (3)
C4—N1—C1—C20.8 (2)O1—C5—C6—C7174.50 (14)
C5—O1—C1—N12.0 (2)C5—C6—C7—C80.2 (3)
C5—O1—C1—C2178.13 (14)C11—O2—C8—C93.5 (2)
C3—N2—C2—C10.2 (2)C11—O2—C8—C7176.93 (14)
N1—C1—C2—N20.8 (3)C6—C7—C8—O2179.41 (15)
O1—C1—C2—N2179.37 (15)C6—C7—C8—C90.2 (3)
C2—N2—C3—C40.3 (3)O2—C8—C9—C10179.76 (15)
C1—N1—C4—C30.3 (2)C7—C8—C9—C100.2 (2)
N2—C3—C4—N10.3 (3)C6—C5—C10—C90.6 (3)
C1—O1—C5—C1090.59 (19)O1—C5—C10—C9174.88 (14)
C1—O1—C5—C695.10 (18)C8—C9—C10—C50.6 (3)
Hydrogen-bond geometry (Å, º) top
Cg1 is the centroid of the N1,N2,C1–C4 ring.
D—H···AD—HH···AD···AD—H···A
C9—H9···Cg1i0.932.873.6326 (18)140
Symmetry code: (i) x+1, y+1, z+1.

Experimental details

Crystal data
Chemical formulaC11H10N2O2
Mr202.21
Crystal system, space groupMonoclinic, P21/c
Temperature (K)293
a, b, c (Å)5.8783 (2), 10.9298 (4), 15.6430 (6)
β (°) 97.109 (2)
V3)997.32 (6)
Z4
Radiation typeMo Kα
µ (mm1)0.10
Crystal size (mm)0.35 × 0.20 × 0.10
Data collection
DiffractometerBruker SMART APEX CCD
Absorption correction
No. of measured, independent and
observed [I > 2σ(I)] reflections
5515, 1743, 1244
Rint0.026
(sin θ/λ)max1)0.595
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.036, 0.100, 1.05
No. of reflections1743
No. of parameters138
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å3)0.13, 0.12

Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).

Hydrogen-bond geometry (Å, º) top
Cg1 is the centroid of the N1,N2,C1–C4 ring.
D—H···AD—HH···AD···AD—H···A
C9—H9···Cg1i0.932.873.6326 (18)140
Symmetry code: (i) x+1, y+1, z+1.
 

Footnotes

Additional correspondence author, e-mail: zana@um.edu.my.

Acknowledgements

AZ thanks the Ministry of Higher Education, Malaysia, for research grants (FP047/2008 C and FP001/2010 A). The authors are also grateful to the University of Malaya for support of the crystallographic facility.

References

First citationAbdullah, Z. (2005). Int. J. Chem. Sci. 3, 9–15.  CAS Google Scholar
First citationBrandenburg, K. (2006). DIAMOND. Crystal Impact GbR, Bonn, Germany.  Google Scholar
First citationBruker (2009). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.  Google Scholar
First citationFarrugia, L. J. (1997). J. Appl. Cryst. 30, 565.  CrossRef IUCr Journals Google Scholar
First citationKawai, M., Lee, M. J., Evans, K. O. & Norlund, T. (2001). J. Fluoresc. 11, 23–32.  Web of Science CrossRef CAS Google Scholar
First citationNasir, S. B., Abdullah, Z., Fairuz, Z. A., Ng, S. W. & Tiekink, E. R. T. (2010). Acta Cryst. E66, o2187.  Web of Science CSD CrossRef IUCr Journals Google Scholar
First citationSheldrick, G. M. (2008). Acta Cryst. A64, 112–122.  Web of Science CrossRef CAS IUCr Journals Google Scholar
First citationWestrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.  Web of Science CrossRef CAS IUCr Journals Google Scholar

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