organic compounds
4-(4-Chlorophenyl)-1-methyl-3-trifluoromethyl-1H-pyrazol-5-amine
aDepartment of Biology and Chemistry, Hunan University of Science and Engineering, Yongzhou, Hunan 425100, People's Republic of China, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: seikweng@um.edu.my
The five-membered ring of the title compound, C11H9ClF3N3, is almost planar (r.m.s. deviation = 0.002 Å) and the phenylene ring is aligned at 44.8 (1)°. The N atom of the amino substituent shows a pyramidal geometry and is a hydrogen-bond donor to a Cl atom and to a ring N atom, which together generate a layer motif.
Related literature
For the synthesis of the title compound, see: Coispeau (1977); Nishiwaki et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1999); cell SAINT (Bruker, 1999); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536810032435/hg2700sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810032435/hg2700Isup2.hkl
Sodium metal (0.35 g, 15 mmol) was dissolved in absolute ethanol (50 ml). To this solution was added 2-(4-chlorophenyl)acetonitrile (1.52 g, 10 mmol) followed by ethyl trifluoroacetate (1.42 g, 10 mmol). The solution was heated for 3 h. The solution was concentrated under vacuum. To the residue was added acetic acid (20 ml) followed by methylhydrazine (0.55 g, 12 mmol). The mixture was stirred for 12 h. The solution was again concentrated under vacuum. The residue was treated with water (30 ml) and the organic compound was extracted with ethyl acetate. The organic phase was washed with saturated sodium bicarbonate (230 ml) and then dried over sodium sulfate. The solvent was removed and the residue was chromatographed on a silica gel column with ethyl acetate:petroleum ether (1:10) as eluant. This gave 2 g (70%) of product as a yellow solid, which was recrystallized from ethyl acetate.
Carbon bound H-atoms were positioned geometrically and refined using the riding model, and with C–H = 0.93 to 0.96 Å and U(H) set to 1.2–1.5 Ueq(C). The amino H-atoms were located in a difference Fourier map, and were refined with a distance restraint of N–H 0.88±0.01 Å; their temperature factors were refined.
The title compound (Scheme I) is first mentioned in a synthesis by the cyclocondensation of
with 4,4,4-trifluoro-2-arylacetoacetonitriles in the context of colorants for polyacrylonitriles (Coispeau, 1977). The structure has been eluciated by carbon-13 NMR spectroscopy (Nishiwaki et al., 1995). We have used a modification of the published procedure to synthesize the compound, which is intended for further study on its pharmaceutical activity. There are no other reports on this compound aside from these studies.For the synthesis of the title compound, see: Coispeau (1977); Nishiwaki et al. (1995).
Data collection: SMART (Bruker, 1999); cell
SAINT (Bruker, 1999); data reduction: SAINT (Bruker, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. Thermal ellipsoid plot (Barbour, 2001) of C11H9ClF3N3 showing displacement ellipsoids at the 50% probability level. H-atoms are drawn as spheres of arbitrary radius. |
C11H9ClF3N3 | F(000) = 560 |
Mr = 275.66 | Dx = 1.538 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 2152 reflections |
a = 5.8958 (5) Å | θ = 2.5–26.6° |
b = 16.8618 (13) Å | µ = 0.34 mm−1 |
c = 12.1087 (10) Å | T = 293 K |
β = 98.459 (1)° | Block, yellow |
V = 1190.68 (17) Å3 | 0.40 × 0.40 × 0.20 mm |
Z = 4 |
Bruker SMART area-detector diffractometer | 2581 independent reflections |
Radiation source: fine-focus sealed tube | 1769 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.029 |
φ and ω scans | θmax = 27.0°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −7→7 |
Tmin = 0.864, Tmax = 1.000 | k = −21→10 |
5716 measured reflections | l = −15→12 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.119 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0629P)2 + 0.1525P] where P = (Fo2 + 2Fc2)/3 |
2581 reflections | (Δ/σ)max = 0.001 |
172 parameters | Δρmax = 0.32 e Å−3 |
2 restraints | Δρmin = −0.26 e Å−3 |
C11H9ClF3N3 | V = 1190.68 (17) Å3 |
Mr = 275.66 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 5.8958 (5) Å | µ = 0.34 mm−1 |
b = 16.8618 (13) Å | T = 293 K |
c = 12.1087 (10) Å | 0.40 × 0.40 × 0.20 mm |
β = 98.459 (1)° |
Bruker SMART area-detector diffractometer | 2581 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1769 reflections with I > 2σ(I) |
Tmin = 0.864, Tmax = 1.000 | Rint = 0.029 |
5716 measured reflections |
R[F2 > 2σ(F2)] = 0.042 | 2 restraints |
wR(F2) = 0.119 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.32 e Å−3 |
2581 reflections | Δρmin = −0.26 e Å−3 |
172 parameters |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.24293 (10) | 0.63048 (3) | 0.86611 (5) | 0.03743 (19) | |
F1 | 0.9033 (3) | 0.36727 (9) | 0.43732 (12) | 0.0619 (5) | |
F2 | 0.7674 (3) | 0.46344 (8) | 0.52371 (12) | 0.0503 (4) | |
F3 | 0.5700 (3) | 0.35880 (11) | 0.48636 (14) | 0.0685 (5) | |
N1 | 1.1139 (3) | 0.27925 (10) | 0.73828 (14) | 0.0272 (4) | |
N2 | 1.0499 (3) | 0.29559 (10) | 0.62838 (14) | 0.0292 (4) | |
N3 | 1.0445 (3) | 0.31883 (12) | 0.91929 (16) | 0.0314 (4) | |
H1 | 0.929 (3) | 0.3386 (15) | 0.948 (2) | 0.054 (8)* | |
H2 | 1.087 (4) | 0.2714 (8) | 0.944 (2) | 0.044 (7)* | |
C1 | 0.6890 (4) | 0.43079 (11) | 0.77159 (17) | 0.0238 (5) | |
C2 | 0.4645 (4) | 0.43995 (12) | 0.71925 (18) | 0.0283 (5) | |
H2A | 0.4060 | 0.4049 | 0.6629 | 0.034* | |
C3 | 0.3258 (4) | 0.50032 (13) | 0.74945 (19) | 0.0293 (5) | |
H3 | 0.1767 | 0.5063 | 0.7129 | 0.035* | |
C4 | 0.4114 (4) | 0.55085 (12) | 0.83380 (19) | 0.0271 (5) | |
C5 | 0.6307 (4) | 0.54242 (12) | 0.89124 (18) | 0.0282 (5) | |
H5 | 0.6846 | 0.5763 | 0.9499 | 0.034* | |
C6 | 0.7681 (4) | 0.48252 (12) | 0.85957 (18) | 0.0266 (5) | |
H6 | 0.9161 | 0.4764 | 0.8975 | 0.032* | |
C7 | 0.8443 (4) | 0.37063 (11) | 0.73603 (18) | 0.0239 (4) | |
C8 | 0.9973 (3) | 0.32257 (12) | 0.80477 (18) | 0.0253 (5) | |
C9 | 0.8878 (4) | 0.35046 (12) | 0.62864 (18) | 0.0267 (5) | |
C10 | 0.7831 (4) | 0.38467 (14) | 0.5202 (2) | 0.0377 (6) | |
C11 | 1.2992 (4) | 0.22382 (14) | 0.7729 (2) | 0.0398 (6) | |
H11A | 1.4002 | 0.2456 | 0.8349 | 0.060* | |
H11B | 1.3831 | 0.2146 | 0.7119 | 0.060* | |
H11C | 1.2369 | 0.1746 | 0.7948 | 0.060* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0397 (3) | 0.0332 (3) | 0.0428 (4) | 0.0094 (2) | 0.0172 (3) | 0.0028 (2) |
F1 | 0.0999 (14) | 0.0632 (11) | 0.0261 (8) | 0.0360 (9) | 0.0205 (8) | 0.0060 (7) |
F2 | 0.0765 (11) | 0.0380 (8) | 0.0359 (9) | 0.0191 (7) | 0.0067 (7) | 0.0071 (6) |
F3 | 0.0630 (11) | 0.0885 (13) | 0.0445 (10) | −0.0080 (9) | −0.0238 (9) | −0.0024 (9) |
N1 | 0.0322 (10) | 0.0243 (9) | 0.0245 (10) | 0.0041 (8) | 0.0025 (8) | −0.0016 (7) |
N2 | 0.0370 (11) | 0.0260 (9) | 0.0242 (10) | −0.0007 (8) | 0.0037 (8) | −0.0031 (7) |
N3 | 0.0414 (12) | 0.0300 (11) | 0.0223 (10) | 0.0046 (9) | 0.0023 (9) | 0.0029 (8) |
C1 | 0.0276 (11) | 0.0209 (10) | 0.0230 (11) | −0.0014 (8) | 0.0040 (9) | 0.0029 (8) |
C2 | 0.0305 (12) | 0.0269 (11) | 0.0273 (12) | −0.0045 (9) | 0.0036 (9) | −0.0009 (9) |
C3 | 0.0244 (11) | 0.0300 (11) | 0.0334 (13) | −0.0007 (9) | 0.0039 (9) | 0.0074 (9) |
C4 | 0.0304 (12) | 0.0221 (10) | 0.0316 (12) | 0.0037 (9) | 0.0139 (10) | 0.0055 (9) |
C5 | 0.0333 (12) | 0.0274 (11) | 0.0243 (11) | −0.0033 (9) | 0.0057 (9) | −0.0041 (9) |
C6 | 0.0272 (11) | 0.0258 (11) | 0.0259 (12) | −0.0005 (9) | 0.0007 (9) | −0.0002 (9) |
C7 | 0.0272 (11) | 0.0212 (10) | 0.0232 (11) | −0.0017 (8) | 0.0030 (9) | −0.0003 (8) |
C8 | 0.0283 (11) | 0.0205 (10) | 0.0271 (12) | −0.0035 (8) | 0.0034 (9) | −0.0004 (9) |
C9 | 0.0312 (11) | 0.0228 (10) | 0.0257 (12) | −0.0028 (9) | 0.0026 (9) | −0.0028 (9) |
C10 | 0.0496 (15) | 0.0362 (13) | 0.0260 (13) | 0.0060 (11) | 0.0014 (11) | −0.0025 (10) |
C11 | 0.0408 (14) | 0.0353 (13) | 0.0425 (15) | 0.0127 (11) | 0.0038 (11) | −0.0030 (11) |
Cl1—C4 | 1.749 (2) | C2—C3 | 1.388 (3) |
F1—C10 | 1.344 (3) | C2—H2A | 0.9300 |
F2—C10 | 1.333 (3) | C3—C4 | 1.368 (3) |
F3—C10 | 1.336 (3) | C3—H3 | 0.9300 |
N1—C8 | 1.348 (3) | C4—C5 | 1.382 (3) |
N1—N2 | 1.357 (2) | C5—C6 | 1.384 (3) |
N1—C11 | 1.452 (3) | C5—H5 | 0.9300 |
N2—C9 | 1.331 (3) | C6—H6 | 0.9300 |
N3—C8 | 1.375 (3) | C7—C8 | 1.394 (3) |
N3—H1 | 0.88 (1) | C7—C9 | 1.404 (3) |
N3—H2 | 0.88 (1) | C9—C10 | 1.483 (3) |
C1—C2 | 1.389 (3) | C11—H11A | 0.9600 |
C1—C6 | 1.402 (3) | C11—H11B | 0.9600 |
C1—C7 | 1.473 (3) | C11—H11C | 0.9600 |
C8—N1—N2 | 112.53 (17) | C5—C6—H6 | 119.3 |
C8—N1—C11 | 127.18 (19) | C1—C6—H6 | 119.3 |
N2—N1—C11 | 120.18 (18) | C8—C7—C9 | 102.82 (18) |
C9—N2—N1 | 103.59 (17) | C8—C7—C1 | 126.98 (19) |
C8—N3—H1 | 109.5 (19) | C9—C7—C1 | 130.08 (19) |
C8—N3—H2 | 113.0 (17) | N1—C8—N3 | 122.16 (19) |
H1—N3—H2 | 114 (2) | N1—C8—C7 | 107.49 (19) |
C2—C1—C6 | 117.73 (19) | N3—C8—C7 | 130.2 (2) |
C2—C1—C7 | 122.32 (18) | N2—C9—C7 | 113.57 (19) |
C6—C1—C7 | 119.94 (19) | N2—C9—C10 | 118.3 (2) |
C3—C2—C1 | 121.3 (2) | C7—C9—C10 | 128.1 (2) |
C3—C2—H2A | 119.3 | F2—C10—F3 | 105.6 (2) |
C1—C2—H2A | 119.3 | F2—C10—F1 | 106.7 (2) |
C4—C3—C2 | 119.1 (2) | F3—C10—F1 | 105.95 (19) |
C4—C3—H3 | 120.5 | F2—C10—C9 | 112.43 (19) |
C2—C3—H3 | 120.5 | F3—C10—C9 | 113.2 (2) |
C3—C4—C5 | 121.79 (19) | F1—C10—C9 | 112.3 (2) |
C3—C4—Cl1 | 119.06 (17) | N1—C11—H11A | 109.5 |
C5—C4—Cl1 | 119.10 (17) | N1—C11—H11B | 109.5 |
C4—C5—C6 | 118.5 (2) | H11A—C11—H11B | 109.5 |
C4—C5—H5 | 120.7 | N1—C11—H11C | 109.5 |
C6—C5—H5 | 120.7 | H11A—C11—H11C | 109.5 |
C5—C6—C1 | 121.4 (2) | H11B—C11—H11C | 109.5 |
C8—N1—N2—C9 | −0.4 (2) | N2—N1—C8—C7 | 0.5 (2) |
C11—N1—N2—C9 | −176.89 (19) | C11—N1—C8—C7 | 176.7 (2) |
C6—C1—C2—C3 | 2.8 (3) | C9—C7—C8—N1 | −0.3 (2) |
C7—C1—C2—C3 | −175.81 (19) | C1—C7—C8—N1 | −176.80 (19) |
C1—C2—C3—C4 | −1.1 (3) | C9—C7—C8—N3 | 175.8 (2) |
C2—C3—C4—C5 | −1.3 (3) | C1—C7—C8—N3 | −0.6 (4) |
C2—C3—C4—Cl1 | 176.15 (16) | N1—N2—C9—C7 | 0.2 (2) |
C3—C4—C5—C6 | 2.0 (3) | N1—N2—C9—C10 | 177.86 (18) |
Cl1—C4—C5—C6 | −175.48 (16) | C8—C7—C9—N2 | 0.1 (2) |
C4—C5—C6—C1 | −0.2 (3) | C1—C7—C9—N2 | 176.4 (2) |
C2—C1—C6—C5 | −2.1 (3) | C8—C7—C9—C10 | −177.3 (2) |
C7—C1—C6—C5 | 176.54 (19) | C1—C7—C9—C10 | −1.0 (4) |
C2—C1—C7—C8 | −138.4 (2) | N2—C9—C10—F2 | −134.0 (2) |
C6—C1—C7—C8 | 43.0 (3) | C7—C9—C10—F2 | 43.3 (3) |
C2—C1—C7—C9 | 46.1 (3) | N2—C9—C10—F3 | 106.4 (2) |
C6—C1—C7—C9 | −132.4 (2) | C7—C9—C10—F3 | −76.3 (3) |
N2—N1—C8—N3 | −176.08 (18) | N2—C9—C10—F1 | −13.6 (3) |
C11—N1—C8—N3 | 0.1 (3) | C7—C9—C10—F1 | 163.7 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H1···Cl1i | 0.88 (1) | 2.65 (2) | 3.413 (2) | 146 (2) |
N3—H2···N2ii | 0.88 (1) | 2.54 (2) | 3.180 (3) | 130 (2) |
Symmetry codes: (i) −x+1, −y+1, −z+2; (ii) x, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C11H9ClF3N3 |
Mr | 275.66 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 5.8958 (5), 16.8618 (13), 12.1087 (10) |
β (°) | 98.459 (1) |
V (Å3) | 1190.68 (17) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.34 |
Crystal size (mm) | 0.40 × 0.40 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.864, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5716, 2581, 1769 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.640 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.119, 1.02 |
No. of reflections | 2581 |
No. of parameters | 172 |
No. of restraints | 2 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.32, −0.26 |
Computer programs: SMART (Bruker, 1999), SAINT (Bruker, 1999), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H1···Cl1i | 0.88 (1) | 2.65 (2) | 3.413 (2) | 146 (2) |
N3—H2···N2ii | 0.88 (1) | 2.54 (2) | 3.180 (3) | 130 (2) |
Symmetry codes: (i) −x+1, −y+1, −z+2; (ii) x, −y+1/2, z+1/2. |
Acknowledgements
The authors thank Hunan University of Science and Engineering and the University of Malaya for supporting this study.
References
Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–211. CrossRef CAS Google Scholar
Bruker (1999). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Coispeau, G. (1977). Ger. Patent DE 76-2643640. Google Scholar
Nishiwaki, T., Arakawa, H. & Kikukawa, H. (1995). J. Chem. Res. (S), pp. 198–199. Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
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The title compound (Scheme I) is first mentioned in a synthesis by the cyclocondensation of hydrazines with 4,4,4-trifluoro-2-arylacetoacetonitriles in the context of colorants for polyacrylonitriles (Coispeau, 1977). The structure has been eluciated by carbon-13 NMR spectroscopy (Nishiwaki et al., 1995). We have used a modification of the published procedure to synthesize the compound, which is intended for further study on its pharmaceutical activity. There are no other reports on this compound aside from these studies.