metal-organic compounds
Aquachlorido{2-[2-(cyclohexylcarbamothioyl-κS)hydrazinylidene-κN1]propanoato(2−)}phenyltin(IV)
aFaculty of Resource Science and Technology, Universiti Malaysia Sarawak, 94300 Kota Samarahan, Sarawak, Malaysia, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: edward.tiekink@gmail.com
In the title organotin compound, [Sn(C6H5)(C10H15N3O2S)Cl(H2O)], the Sn atom is coordinated by the S, O, and imine N atoms of the dinegative tridentate ligand, a chloride ligand, the ipso-C atom of a phenyl ligand and by a water molecule in a distorted octahedral coordination environment. Coordinated water molecules link the organotin molecules by forming O—H⋯O hydrogen bonds with both carbonyl and carboxylate O atoms, leading to 12-membered {⋯OCO⋯HOH⋯}2 synthons. This results in the formation of supramolecular chains along the c axis. The chains pack in the ac plane and stack along the b axis with links between layers afforded by N—H⋯Cl hydrogen bonds.
Related literature
For background to the biological activity of tin/organotin compounds, see: Gielen & Tiekink (2005). For related studies on organotin compounds, see: Affan et al. (2009); Zukerman-Schpector et al. (2009); Affan et al. (2010).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536810031715/lh5114sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810031715/lh5114Isup2.hkl
The pyruvic acid cyclohexyl thiosemicarbazone ligand (0.243 g, 1.0 mmol) was dissolved in dry methanol (10 ml) in a Schlenk apparatus under a purified dry nitrogen atmosphere. Phenyltin(IV) trichloride (0.302 g, 1.0 mmol) dissolved in absolute methanol (10 ml) was added drop-wise. The resulting mixture was refluxed for 5 h. The resulting solid was filtered and dried in vacuo over silica gel. Re-crystallization was by slow evaporation of its methanol solution yielded light-brown crystals of (I). Yield 0.43 g, 78%: M.pt.: 477–479 K. Anal. Calc. for C16H22ClN3O3SSn: C, 39.17; H, 4.52; N, 8.56%. Found: C, 39.16; H, 4.50; N, 8.54%
Carbon-bound H-atoms were placed in calculated positions (C—H 0.95 to 1.00 Å) and were included in the
in the riding model approximation, with Uiso(H) set to 1.2 to 1.5Ueq(C). The O– and N-bound H-atoms were located in a difference Fourier map, and was refined with distance restraints of O–H = 0.84 ±0.01 Å and N–H = 0.86±0.01 Å; the Uiso values were freely refinedOrganotin compounds continue to attract considerable owing to the wide variety of biological properties (Gielen & Tiekink, 2005). In continuation of our work in this area (Affan et al., 2009; Zukerman-Schpector et al., 2009; Affan et al. 2010), the title organotin compound, (I), was synthesized and structurally characterized.
The Sn atom is coordinated via the S, O, and imine-N atoms of the dinegative tridentate ligand, thereby forming two planar five-membered chelate rings. The distorted CClNO2S octahedral coordination geometry is completed by an aqua ligand, a chloride atom, and the ipso-C atom of the phenyl group, Table 1. The greatest distortion from the ideal octahedral geometry is found in the O1–Sn–S1 angle of 153.73 (6) °, a feature which arises due to the restricted bite distances of the chelate rings.
The most notable feature of the crystal packing is the formation of O–H···O and N–H···Cl hydrogen bonds, Table 1. The water molecule hydrogen bonds to a carbonyl-O of one molecule and a carboxyl-O of another. Two-fold symmetry leads to the formation of a 12-membered {···OCO···HOH···}2 synthon and the formation of a supramolecular chain along the c axis, Fig. 2. The chains pack in the ac plane and stack along the b axis with the primary interactions between successive layers being hydrogen bonds of the type N–H···Cl, Fig. 3.
For background to the biological activity of tin/organotin compounds, see: Gielen & Tiekink (2005). For related studies on organotin compounds, see: Affan et al. (2009); Zukerman-Schpector et al. (2009); Affan et al. (2010).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).[Sn(C6H5)(C10H15N3O2S)Cl(H2O)] | F(000) = 1968 |
Mr = 490.57 | Dx = 1.665 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 8808 reflections |
a = 16.3904 (9) Å | θ = 2.6–28.3° |
b = 19.2018 (10) Å | µ = 1.57 mm−1 |
c = 13.1127 (7) Å | T = 100 K |
β = 108.4421 (7)° | Block, light-brown |
V = 3915.0 (4) Å3 | 0.30 × 0.25 × 0.20 mm |
Z = 8 |
Bruker SMART APEX diffractometer | 4498 independent reflections |
Radiation source: fine-focus sealed tube | 3853 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.034 |
ω scan | θmax = 27.5°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −21→21 |
Tmin = 0.613, Tmax = 0.746 | k = −24→24 |
18020 measured reflections | l = −16→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.027 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.091 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.19 | w = 1/[σ2(Fo2) + (0.05P)2 + 0.5P] where P = (Fo2 + 2Fc2)/3 |
4498 reflections | (Δ/σ)max = 0.001 |
239 parameters | Δρmax = 0.54 e Å−3 |
3 restraints | Δρmin = −0.53 e Å−3 |
[Sn(C6H5)(C10H15N3O2S)Cl(H2O)] | V = 3915.0 (4) Å3 |
Mr = 490.57 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 16.3904 (9) Å | µ = 1.57 mm−1 |
b = 19.2018 (10) Å | T = 100 K |
c = 13.1127 (7) Å | 0.30 × 0.25 × 0.20 mm |
β = 108.4421 (7)° |
Bruker SMART APEX diffractometer | 4498 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3853 reflections with I > 2σ(I) |
Tmin = 0.613, Tmax = 0.746 | Rint = 0.034 |
18020 measured reflections |
R[F2 > 2σ(F2)] = 0.027 | 3 restraints |
wR(F2) = 0.091 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.19 | Δρmax = 0.54 e Å−3 |
4498 reflections | Δρmin = −0.53 e Å−3 |
239 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Sn | 0.404486 (12) | 0.620716 (10) | 0.467538 (16) | 0.01146 (8) | |
Cl1 | 0.34899 (5) | 0.69580 (4) | 0.30936 (6) | 0.01767 (16) | |
S1 | 0.32710 (5) | 0.68215 (4) | 0.57359 (6) | 0.01380 (16) | |
O1 | 0.41904 (13) | 0.54024 (11) | 0.36085 (18) | 0.0163 (5) | |
O2 | 0.34146 (15) | 0.47501 (12) | 0.22370 (19) | 0.0209 (5) | |
O1W | 0.43443 (15) | 0.53800 (13) | 0.5926 (2) | 0.0201 (5) | |
H1W | 0.475 (3) | 0.512 (3) | 0.590 (5) | 0.09 (2)* | |
H2W | 0.406 (3) | 0.531 (3) | 0.634 (3) | 0.066 (17)* | |
N1 | 0.16705 (17) | 0.65474 (14) | 0.5583 (2) | 0.0158 (5) | |
H1N | 0.176 (2) | 0.6892 (13) | 0.602 (2) | 0.019 (10)* | |
N2 | 0.21381 (16) | 0.58361 (13) | 0.4501 (2) | 0.0151 (5) | |
N3 | 0.27999 (16) | 0.56696 (13) | 0.4134 (2) | 0.0140 (5) | |
C1 | 0.0801 (2) | 0.62496 (16) | 0.5200 (3) | 0.0182 (7) | |
H1A | 0.0852 | 0.5735 | 0.5119 | 0.022* | |
C2 | 0.0277 (2) | 0.6546 (2) | 0.4129 (3) | 0.0275 (8) | |
H2A | 0.0576 | 0.6459 | 0.3593 | 0.033* | |
H2B | 0.0219 | 0.7056 | 0.4195 | 0.033* | |
C3 | −0.0616 (3) | 0.6211 (3) | 0.3750 (4) | 0.0455 (12) | |
H3A | −0.0958 | 0.6422 | 0.3058 | 0.055* | |
H3B | −0.0558 | 0.5707 | 0.3630 | 0.055* | |
C4 | −0.1082 (2) | 0.6313 (2) | 0.4576 (4) | 0.0354 (10) | |
H4A | −0.1207 | 0.6815 | 0.4625 | 0.042* | |
H4B | −0.1637 | 0.6061 | 0.4339 | 0.042* | |
C5 | −0.0553 (2) | 0.6053 (2) | 0.5669 (4) | 0.0324 (9) | |
H5A | −0.0496 | 0.5540 | 0.5644 | 0.039* | |
H5B | −0.0852 | 0.6163 | 0.6197 | 0.039* | |
C6 | 0.0344 (2) | 0.63821 (19) | 0.6035 (3) | 0.0230 (7) | |
H6A | 0.0294 | 0.6890 | 0.6133 | 0.028* | |
H6B | 0.0687 | 0.6181 | 0.6735 | 0.028* | |
C7 | 0.2306 (2) | 0.63535 (16) | 0.5207 (3) | 0.0140 (6) | |
C8 | 0.27078 (19) | 0.52131 (16) | 0.3388 (2) | 0.0147 (6) | |
C9 | 0.1909 (2) | 0.48168 (17) | 0.2862 (3) | 0.0204 (7) | |
H9A | 0.1428 | 0.5030 | 0.3041 | 0.031* | |
H9B | 0.1982 | 0.4334 | 0.3116 | 0.031* | |
H9C | 0.1789 | 0.4825 | 0.2081 | 0.031* | |
C10 | 0.34849 (19) | 0.51063 (16) | 0.3033 (3) | 0.0155 (6) | |
C11 | 0.53637 (18) | 0.64917 (15) | 0.5141 (2) | 0.0131 (6) | |
C12 | 0.5831 (2) | 0.66164 (17) | 0.6212 (3) | 0.0198 (7) | |
H12A | 0.5558 | 0.6584 | 0.6750 | 0.024* | |
C13 | 0.6698 (2) | 0.67889 (19) | 0.6493 (3) | 0.0226 (7) | |
H13 | 0.7013 | 0.6884 | 0.7222 | 0.027* | |
C14 | 0.7103 (2) | 0.68218 (19) | 0.5720 (3) | 0.0230 (7) | |
H14 | 0.7697 | 0.6935 | 0.5919 | 0.028* | |
C15 | 0.6644 (2) | 0.66898 (18) | 0.4644 (3) | 0.0221 (7) | |
H15 | 0.6923 | 0.6708 | 0.4112 | 0.027* | |
C16 | 0.5775 (2) | 0.65323 (17) | 0.4362 (3) | 0.0187 (7) | |
H16 | 0.5457 | 0.6451 | 0.3629 | 0.022* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Sn | 0.01020 (12) | 0.01204 (12) | 0.01312 (13) | 0.00088 (7) | 0.00509 (8) | −0.00039 (7) |
Cl1 | 0.0226 (4) | 0.0173 (4) | 0.0131 (4) | 0.0036 (3) | 0.0056 (3) | 0.0019 (3) |
S1 | 0.0125 (3) | 0.0155 (4) | 0.0143 (4) | 0.0011 (3) | 0.0054 (3) | −0.0021 (3) |
O1 | 0.0140 (10) | 0.0154 (11) | 0.0216 (12) | −0.0001 (8) | 0.0087 (9) | −0.0032 (9) |
O2 | 0.0226 (12) | 0.0207 (12) | 0.0239 (13) | −0.0031 (9) | 0.0137 (10) | −0.0074 (10) |
O1W | 0.0162 (11) | 0.0218 (12) | 0.0270 (13) | 0.0088 (9) | 0.0137 (10) | 0.0105 (10) |
N1 | 0.0133 (12) | 0.0166 (14) | 0.0200 (14) | 0.0002 (10) | 0.0089 (11) | −0.0040 (11) |
N2 | 0.0128 (12) | 0.0174 (13) | 0.0187 (14) | 0.0013 (10) | 0.0099 (10) | −0.0015 (11) |
N3 | 0.0147 (12) | 0.0135 (12) | 0.0163 (13) | 0.0017 (10) | 0.0083 (10) | 0.0009 (10) |
C1 | 0.0138 (15) | 0.0158 (16) | 0.0284 (19) | −0.0014 (11) | 0.0117 (14) | −0.0014 (13) |
C2 | 0.0185 (17) | 0.045 (2) | 0.0203 (18) | −0.0013 (15) | 0.0084 (14) | −0.0053 (16) |
C3 | 0.021 (2) | 0.078 (4) | 0.035 (3) | −0.0079 (19) | 0.0054 (17) | −0.024 (2) |
C4 | 0.0161 (17) | 0.045 (3) | 0.048 (3) | −0.0062 (16) | 0.0146 (17) | −0.0146 (19) |
C5 | 0.0234 (19) | 0.0272 (19) | 0.056 (3) | −0.0001 (15) | 0.0258 (19) | 0.0030 (18) |
C6 | 0.0174 (16) | 0.0292 (18) | 0.0270 (19) | 0.0058 (14) | 0.0136 (14) | 0.0069 (15) |
C7 | 0.0163 (15) | 0.0127 (14) | 0.0148 (15) | 0.0012 (11) | 0.0073 (12) | 0.0023 (12) |
C8 | 0.0147 (14) | 0.0155 (15) | 0.0151 (15) | 0.0018 (11) | 0.0066 (12) | −0.0004 (12) |
C9 | 0.0184 (16) | 0.0188 (17) | 0.0260 (18) | −0.0035 (13) | 0.0100 (14) | −0.0066 (14) |
C10 | 0.0165 (15) | 0.0137 (15) | 0.0184 (16) | 0.0006 (12) | 0.0085 (12) | 0.0009 (12) |
C11 | 0.0113 (13) | 0.0123 (14) | 0.0164 (15) | 0.0010 (11) | 0.0056 (11) | 0.0023 (12) |
C12 | 0.0166 (15) | 0.0265 (18) | 0.0186 (17) | −0.0005 (13) | 0.0090 (13) | 0.0020 (14) |
C13 | 0.0179 (16) | 0.034 (2) | 0.0126 (16) | −0.0060 (14) | −0.0001 (13) | 0.0006 (14) |
C14 | 0.0123 (15) | 0.0324 (19) | 0.0227 (18) | −0.0044 (13) | 0.0034 (13) | 0.0030 (15) |
C15 | 0.0147 (15) | 0.0342 (19) | 0.0198 (17) | −0.0017 (14) | 0.0088 (13) | 0.0030 (15) |
C16 | 0.0162 (15) | 0.0255 (18) | 0.0138 (16) | 0.0002 (13) | 0.0042 (12) | −0.0013 (13) |
Sn—C11 | 2.123 (3) | C3—H3B | 0.9900 |
Sn—O1 | 2.148 (2) | C4—C5 | 1.506 (6) |
Sn—N3 | 2.195 (3) | C4—H4A | 0.9900 |
Sn—O1w | 2.224 (2) | C4—H4B | 0.9900 |
Sn—Cl1 | 2.4524 (8) | C5—C6 | 1.532 (5) |
Sn—S1 | 2.4598 (7) | C5—H5A | 0.9900 |
S1—C7 | 1.759 (3) | C5—H5B | 0.9900 |
O1—C10 | 1.295 (4) | C6—H6A | 0.9900 |
O2—C10 | 1.223 (4) | C6—H6B | 0.9900 |
O1W—H1W | 0.84 (5) | C8—C9 | 1.482 (4) |
O1W—H2W | 0.83 (5) | C8—C10 | 1.502 (4) |
N1—C7 | 1.339 (4) | C9—H9A | 0.9800 |
N1—C1 | 1.469 (4) | C9—H9B | 0.9800 |
N1—H1N | 0.86 (3) | C9—H9C | 0.9800 |
N2—C7 | 1.326 (4) | C11—C12 | 1.391 (4) |
N2—N3 | 1.357 (3) | C11—C16 | 1.392 (4) |
N3—C8 | 1.286 (4) | C12—C13 | 1.390 (4) |
C1—C2 | 1.507 (5) | C12—H12A | 0.9500 |
C1—C6 | 1.530 (4) | C13—C14 | 1.377 (5) |
C1—H1A | 1.0000 | C13—H13 | 0.9500 |
C2—C3 | 1.531 (5) | C14—C15 | 1.395 (5) |
C2—H2A | 0.9900 | C14—H14 | 0.9500 |
C2—H2B | 0.9900 | C15—C16 | 1.387 (4) |
C3—C4 | 1.524 (6) | C15—H15 | 0.9500 |
C3—H3A | 0.9900 | C16—H16 | 0.9500 |
C11—Sn—O1 | 93.42 (10) | C5—C4—H4B | 109.3 |
C11—Sn—N3 | 166.35 (10) | C3—C4—H4B | 109.3 |
O1—Sn—N3 | 74.60 (9) | H4A—C4—H4B | 108.0 |
C11—Sn—O1W | 90.27 (10) | C4—C5—C6 | 111.6 (3) |
O1—Sn—O1W | 85.55 (9) | C4—C5—H5A | 109.3 |
N3—Sn—O1W | 82.43 (9) | C6—C5—H5A | 109.3 |
C11—Sn—Cl1 | 99.40 (8) | C4—C5—H5B | 109.3 |
O1—Sn—Cl1 | 87.71 (6) | C6—C5—H5B | 109.3 |
N3—Sn—Cl1 | 86.84 (7) | H5A—C5—H5B | 108.0 |
O1W—Sn—Cl1 | 168.53 (7) | C1—C6—C5 | 110.2 (3) |
C11—Sn—S1 | 111.98 (8) | C1—C6—H6A | 109.6 |
O1—Sn—S1 | 153.73 (6) | C5—C6—H6A | 109.6 |
N3—Sn—S1 | 79.37 (7) | C1—C6—H6B | 109.6 |
O1W—Sn—S1 | 87.63 (6) | C5—C6—H6B | 109.6 |
Cl1—Sn—S1 | 94.39 (3) | H6A—C6—H6B | 108.1 |
C7—S1—Sn | 95.30 (10) | N2—C7—N1 | 116.8 (3) |
C10—O1—Sn | 115.62 (18) | N2—C7—S1 | 128.3 (2) |
Sn—O1W—H1W | 113 (4) | N1—C7—S1 | 114.8 (2) |
Sn—O1W—H2W | 124 (4) | N3—C8—C9 | 125.3 (3) |
H1W—O1W—H2W | 123 (5) | N3—C8—C10 | 114.9 (3) |
C7—N1—C1 | 123.4 (3) | C9—C8—C10 | 119.8 (3) |
C7—N1—H1N | 119 (3) | C8—C9—H9A | 109.5 |
C1—N1—H1N | 118 (2) | C8—C9—H9B | 109.5 |
C7—N2—N3 | 114.3 (2) | H9A—C9—H9B | 109.5 |
C8—N3—N2 | 121.0 (3) | C8—C9—H9C | 109.5 |
C8—N3—Sn | 116.1 (2) | H9A—C9—H9C | 109.5 |
N2—N3—Sn | 122.70 (19) | H9B—C9—H9C | 109.5 |
N1—C1—C2 | 112.1 (3) | O2—C10—O1 | 124.6 (3) |
N1—C1—C6 | 109.4 (3) | O2—C10—C8 | 118.7 (3) |
C2—C1—C6 | 109.9 (3) | O1—C10—C8 | 116.6 (3) |
N1—C1—H1A | 108.4 | C12—C11—C16 | 119.4 (3) |
C2—C1—H1A | 108.4 | C12—C11—Sn | 121.3 (2) |
C6—C1—H1A | 108.4 | C16—C11—Sn | 119.2 (2) |
C1—C2—C3 | 110.4 (3) | C13—C12—C11 | 119.9 (3) |
C1—C2—H2A | 109.6 | C13—C12—H12A | 120.0 |
C3—C2—H2A | 109.6 | C11—C12—H12A | 120.0 |
C1—C2—H2B | 109.6 | C14—C13—C12 | 120.4 (3) |
C3—C2—H2B | 109.6 | C14—C13—H13 | 119.8 |
H2A—C2—H2B | 108.1 | C12—C13—H13 | 119.8 |
C4—C3—C2 | 111.0 (3) | C13—C14—C15 | 120.3 (3) |
C4—C3—H3A | 109.4 | C13—C14—H14 | 119.9 |
C2—C3—H3A | 109.4 | C15—C14—H14 | 119.9 |
C4—C3—H3B | 109.4 | C16—C15—C14 | 119.3 (3) |
C2—C3—H3B | 109.4 | C16—C15—H15 | 120.3 |
H3A—C3—H3B | 108.0 | C14—C15—H15 | 120.3 |
C5—C4—C3 | 111.5 (3) | C15—C16—C11 | 120.7 (3) |
C5—C4—H4A | 109.3 | C15—C16—H16 | 119.7 |
C3—C4—H4A | 109.3 | C11—C16—H16 | 119.7 |
C11—Sn—S1—C7 | −173.02 (13) | N3—N2—C7—S1 | −1.7 (4) |
O1—Sn—S1—C7 | −8.72 (18) | C1—N1—C7—N2 | −4.2 (5) |
N3—Sn—S1—C7 | −0.95 (12) | C1—N1—C7—S1 | 176.4 (2) |
O1W—Sn—S1—C7 | −83.69 (12) | Sn—S1—C7—N2 | 1.9 (3) |
Cl1—Sn—S1—C7 | 85.00 (10) | Sn—S1—C7—N1 | −178.8 (2) |
C11—Sn—O1—C10 | −173.8 (2) | N2—N3—C8—C9 | −0.9 (5) |
N3—Sn—O1—C10 | 12.9 (2) | Sn—N3—C8—C9 | −176.5 (2) |
O1W—Sn—O1—C10 | 96.2 (2) | N2—N3—C8—C10 | 177.5 (3) |
Cl1—Sn—O1—C10 | −74.5 (2) | Sn—N3—C8—C10 | 1.9 (3) |
S1—Sn—O1—C10 | 20.8 (3) | Sn—O1—C10—O2 | 164.0 (3) |
C7—N2—N3—C8 | −174.9 (3) | Sn—O1—C10—C8 | −16.3 (3) |
C7—N2—N3—Sn | 0.4 (4) | N3—C8—C10—O2 | −170.7 (3) |
C11—Sn—N3—C8 | −36.8 (6) | C9—C8—C10—O2 | 7.9 (5) |
O1—Sn—N3—C8 | −7.6 (2) | N3—C8—C10—O1 | 9.6 (4) |
O1W—Sn—N3—C8 | −95.0 (2) | C9—C8—C10—O1 | −171.9 (3) |
Cl1—Sn—N3—C8 | 80.9 (2) | O1—Sn—C11—C12 | −135.8 (3) |
S1—Sn—N3—C8 | 176.0 (2) | N3—Sn—C11—C12 | −107.6 (5) |
C11—Sn—N3—N2 | 147.7 (4) | O1W—Sn—C11—C12 | −50.2 (3) |
O1—Sn—N3—N2 | 176.9 (2) | Cl1—Sn—C11—C12 | 136.0 (2) |
O1W—Sn—N3—N2 | 89.5 (2) | S1—Sn—C11—C12 | 37.3 (3) |
Cl1—Sn—N3—N2 | −94.6 (2) | O1—Sn—C11—C16 | 42.1 (3) |
S1—Sn—N3—N2 | 0.5 (2) | N3—Sn—C11—C16 | 70.3 (5) |
C7—N1—C1—C2 | −77.7 (4) | O1W—Sn—C11—C16 | 127.7 (3) |
C7—N1—C1—C6 | 160.1 (3) | Cl1—Sn—C11—C16 | −46.1 (3) |
N1—C1—C2—C3 | 178.8 (3) | S1—Sn—C11—C16 | −144.8 (2) |
C6—C1—C2—C3 | −59.3 (4) | C16—C11—C12—C13 | 0.9 (5) |
C1—C2—C3—C4 | 57.3 (5) | Sn—C11—C12—C13 | 178.8 (3) |
C2—C3—C4—C5 | −54.5 (5) | C11—C12—C13—C14 | −1.5 (5) |
C3—C4—C5—C6 | 54.2 (5) | C12—C13—C14—C15 | 0.7 (6) |
N1—C1—C6—C5 | −178.0 (3) | C13—C14—C15—C16 | 0.7 (5) |
C2—C1—C6—C5 | 58.5 (4) | C14—C15—C16—C11 | −1.3 (5) |
C4—C5—C6—C1 | −56.1 (4) | C12—C11—C16—C15 | 0.5 (5) |
N3—N2—C7—N1 | 178.9 (3) | Sn—C11—C16—C15 | −177.5 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1w—H1w···O1i | 0.84 (5) | 1.94 (3) | 2.733 (3) | 159 (6) |
O1w—H2w···O2ii | 0.83 (5) | 1.81 (2) | 2.645 (3) | 174 (5) |
N1—H1n···Cl1iii | 0.86 (3) | 2.59 (2) | 3.407 (3) | 161 (3) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, −y+1, z+1/2; (iii) −x+1/2, −y+3/2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Sn(C6H5)(C10H15N3O2S)Cl(H2O)] |
Mr | 490.57 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 100 |
a, b, c (Å) | 16.3904 (9), 19.2018 (10), 13.1127 (7) |
β (°) | 108.4421 (7) |
V (Å3) | 3915.0 (4) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 1.57 |
Crystal size (mm) | 0.30 × 0.25 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART APEX diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.613, 0.746 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 18020, 4498, 3853 |
Rint | 0.034 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.027, 0.091, 1.19 |
No. of reflections | 4498 |
No. of parameters | 239 |
No. of restraints | 3 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.54, −0.53 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
Sn—C11 | 2.123 (3) | Sn—O1w | 2.224 (2) |
Sn—O1 | 2.148 (2) | Sn—Cl1 | 2.4524 (8) |
Sn—N3 | 2.195 (3) | Sn—S1 | 2.4598 (7) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1w—H1w···O1i | 0.84 (5) | 1.94 (3) | 2.733 (3) | 159 (6) |
O1w—H2w···O2ii | 0.83 (5) | 1.81 (2) | 2.645 (3) | 174 (5) |
N1—H1n···Cl1iii | 0.86 (3) | 2.587 (16) | 3.407 (3) | 161 (3) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, −y+1, z+1/2; (iii) −x+1/2, −y+3/2, −z+1. |
Footnotes
‡Additional correspondence author, e-mail: maaffan@frst.unimas.my.
Acknowledgements
This work was financially supported by the Ministry of Science Technology and Innovation (MOSTI) under a research grant (No. 06–01-09-SF0046). The authors would like to thank Universiti Malaysia Sarawak (UNIMAS) for the facilities to carry out the research work and the University of Malaya for support of the crystallographic facility.
References
Affan, M. A., Sam, N. B., Ahmad, F. B. & Tiekink, E. R. T. (2010). Acta Cryst. E66, m924. Web of Science CSD CrossRef IUCr Journals Google Scholar
Affan, M. A., Wan Foo, S., Jusoh, I., Hanapi, S. & Tiekink, E. R. T. (2009). Inorg. Chim. Acta, 362, 5031–5037. Web of Science CSD CrossRef CAS Google Scholar
Brandenburg, K. (2006). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Bruker (2009). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Gielen, M. & Tiekink, E. R. T. (2005). Editors. Metallotherapeutic Drugs and Metal- Based Diagnostic Agents: The Use of Metals in Medicine, pp. 421–439. Chichester: John Wiley & Sons. Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
Zukerman-Schpector, J., Affan, M. A., Foo, S. W. & Tiekink, E. R. T. (2009). Acta Cryst. E65, o2951. Web of Science CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Organotin compounds continue to attract considerable owing to the wide variety of biological properties (Gielen & Tiekink, 2005). In continuation of our work in this area (Affan et al., 2009; Zukerman-Schpector et al., 2009; Affan et al. 2010), the title organotin compound, (I), was synthesized and structurally characterized.
The Sn atom is coordinated via the S, O, and imine-N atoms of the dinegative tridentate ligand, thereby forming two planar five-membered chelate rings. The distorted CClNO2S octahedral coordination geometry is completed by an aqua ligand, a chloride atom, and the ipso-C atom of the phenyl group, Table 1. The greatest distortion from the ideal octahedral geometry is found in the O1–Sn–S1 angle of 153.73 (6) °, a feature which arises due to the restricted bite distances of the chelate rings.
The most notable feature of the crystal packing is the formation of O–H···O and N–H···Cl hydrogen bonds, Table 1. The water molecule hydrogen bonds to a carbonyl-O of one molecule and a carboxyl-O of another. Two-fold symmetry leads to the formation of a 12-membered {···OCO···HOH···}2 synthon and the formation of a supramolecular chain along the c axis, Fig. 2. The chains pack in the ac plane and stack along the b axis with the primary interactions between successive layers being hydrogen bonds of the type N–H···Cl, Fig. 3.