metal-organic compounds
catena-Poly[[[aquapyridinezinc(II)]-μ2-3,3′-(p-phenylene)diacrylato] pyridine solvate]
aSchool of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou, People's Republic of China
*Correspondence e-mail: zyfu@scut.edu.cn
The title compound, {[Zn(C12H8O4)(C5H5N)(H2O)]·C5H5N}n, has been prepared by hydrothermal reaction. The ZnII atom is six-coordinated by four carboxylate O atoms of two p-phenylenediacrylate (ppda2−) ligands, one N atom of a pyridine molecule and one O atom of a water molecule in a distorted octahedral environment. The carboxylate groups of the ppda2− anions are in a bridging–chelating mode, in which two O atoms chelate one Zn2+ ion. These connections result in an extended chain structure. Parallel packing of the chains forms a two-dimensional network with intermolecular edge-to-face interactions. Further linkages between the layers through O—H⋯O hydrogen-bonding interactions result in a three-dimensional supramolecular architecture with one-dimensional rectanglar channels.
Related literature
For the applications of metal-organic frameworks, see: Li et al. (2009); Zhang et al. (2010). For the rational design and synthesis of coordination polymers by covalent interactions or supramolecular contacts, see: Jose et al. (2010); Zeng et al. (2010). For a similar complex, see: Sun et al. (2009).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1998); cell SAINT (Bruker, 1998); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536810033167/pb2038sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810033167/pb2038Isup2.hkl
A mixture of H2ppda (0.0218 g, 0.1 mmol), Zn(OAc)2.2H2O (0.0219 g, 0.1 mmol), 4,4,-bpy (0.0156 g, 0.1 mmol), and py/H2O (1:3, 12 ml) was sealed in a 25 ml Teflon-lined bomb and heated at 353 K for 48 h. The reaction mixture was then allowed to cool to room temperature at a rate of 3 K/h. Colorless block-shape crystals were obtained.
H atoms were positioned geometrically and refined using a riding model, with C—H = 0.93–0.97 Å and with Uiso(H) = 1.2 (1.5 for methyl groups) times Ueq(C). The non-hydrogen atoms were refined anisotropically. 34 low-theta reflections were omitted from the data set. These Low-theta reflections which calculate large but have a near-zero Fobs, might have been obscured by the beamstop. They were omitted for a well
A restraint was applied for the O5 and H2 atom with O5—H2 = 0.82 Å.Metal-organic frameworks (MOFs) became one of the most active research areas in chemistry and materials in recent years due to their intriguing variety of architectures as well as promising applications as functional materials (Li et al., 2009; Zhang et al., 2010). One of the current interesting topics is to rationally design and synthesize coordination polymers and supramolecular organization by coordinated covalent bonds or supramolecular contacts (Zeng et al., 2010; Jose et al., 2010). Herein, we report the synthesis and characterization of a new metal organic framework with three-dimensional supramolecular structural motif. In the title compound, the ZnII center is six-coordinated in a distorted octahedral geometry (Figure 1), surrounded by O1, O2, O4 from two ppda2- ligand and O5 from a water molecule in the equatorial plane, and N1, O3 of pyridine molecule and ppda2- ligand respectively in the axial position. The ppda2- anion adopts a bridging coordination mode, interconnect with the zinc ions forming a 1-D infinite chain. The shortest distance between the neighbour zinc centers is 15.26 Å. The parallel chains are arranged into a two-dimensional network by intermolecular edge-to-face C—H···pi interactions (Figure 2). Two neighboring pyridine molecules from adjacent chains are parallel and form a dihedral angle of 58.1° with the plane of uncoordinated pyridine molecule. C—H···pi interactions exist between uncoordinated pyridine molecule and coordinated pyridine molecules. The C19—H19A and C22—H22A groups point to the center of adjacent pyridine rings, with H···centroid distances 2.9408 (3) and 3.3096 (5) Å. These two-dimensional networks are further linked via interlayer strong O—H···O hydrogen-bonding interactions, forming a three-dimensional supramolecular architecture with one-dimensional rectangle-shaped channels along the a direction (Figure 3). The H1···O4 distance is 1.8628Å and the O5—H1···O4 bond angle is 171.58°. Guest pyridine molecules are situated in the cavities.
For the applications of metal-organic frameworks, see: Li et al. (2009); Zhang et al. (2010). For the rational design and synthesis of coordination polymers by coordinated covalent bonds or supramolecular contacts, see: Jose et al. (2010); Zeng et al. (2010). For a similar complex, see: Sun et al. (2009).
Data collection: SMART (Bruker, 1998); cell
SAINT (Bruker, 1998); data reduction: SAINT (Sheldrick, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).[Zn(C12H8O4)(C5H5N)(H2O)]·C5H5N | F(000) = 944 |
Mr = 457.77 | Dx = 1.446 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 3657 reflections |
a = 10.2132 (15) Å | θ = 2.9–25.0° |
b = 17.375 (3) Å | µ = 1.20 mm−1 |
c = 12.8144 (19) Å | T = 110 K |
β = 112.360 (2)° | Block, colorless |
V = 2103.0 (5) Å3 | 0.30 × 0.16 × 0.15 mm |
Z = 4 |
Bruker SMART CCD diffractometer | 3657 independent reflections |
Radiation source: fine-focus sealed tube | 2923 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
ω scans | θmax = 25.0°, θmin = 2.9° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −12→12 |
Tmin = 0.74, Tmax = 0.85 | k = −20→15 |
9012 measured reflections | l = −11→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.035 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.088 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.044P)2 + 1.4847P] where P = (Fo2 + 2Fc2)/3 |
3657 reflections | (Δ/σ)max < 0.001 |
267 parameters | Δρmax = 0.91 e Å−3 |
1 restraint | Δρmin = −0.81 e Å−3 |
[Zn(C12H8O4)(C5H5N)(H2O)]·C5H5N | V = 2103.0 (5) Å3 |
Mr = 457.77 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.2132 (15) Å | µ = 1.20 mm−1 |
b = 17.375 (3) Å | T = 110 K |
c = 12.8144 (19) Å | 0.30 × 0.16 × 0.15 mm |
β = 112.360 (2)° |
Bruker SMART CCD diffractometer | 3657 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2923 reflections with I > 2σ(I) |
Tmin = 0.74, Tmax = 0.85 | Rint = 0.026 |
9012 measured reflections |
R[F2 > 2σ(F2)] = 0.035 | 1 restraint |
wR(F2) = 0.088 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.91 e Å−3 |
3657 reflections | Δρmin = −0.81 e Å−3 |
267 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.5178 (2) | −0.01394 (13) | 0.75537 (18) | 0.0163 (5) | |
C18 | 0.9544 (3) | 0.03667 (18) | 0.3132 (2) | 0.0260 (7) | |
H18A | 0.9348 | 0.0054 | 0.3663 | 0.031* | |
Zn1 | 0.41999 (3) | 0.072906 (17) | 0.63842 (2) | 0.01285 (11) | |
C1 | 1.3097 (3) | 0.35091 (15) | 0.2483 (2) | 0.0145 (6) | |
O1 | 1.44021 (18) | 0.34052 (11) | 0.27971 (15) | 0.0177 (4) | |
O2 | 1.24483 (18) | 0.39778 (11) | 0.16907 (14) | 0.0149 (4) | |
O3 | 0.40900 (19) | 0.18631 (11) | 0.52712 (15) | 0.0193 (4) | |
O4 | 0.58751 (18) | 0.10624 (10) | 0.60053 (14) | 0.0148 (4) | |
O5 | 0.3145 (2) | 0.00368 (12) | 0.50538 (16) | 0.0183 (4) | |
H2 | 0.239 (3) | 0.0196 (18) | 0.451 (2) | 0.031 (9)* | |
H1 | 0.351 (4) | −0.026 (2) | 0.476 (3) | 0.030 (10)* | |
C2 | 1.2295 (3) | 0.30907 (16) | 0.3060 (2) | 0.0155 (6) | |
H2A | 1.2736 | 0.2670 | 0.3539 | 0.019* | |
C3 | 1.0980 (3) | 0.32845 (15) | 0.2929 (2) | 0.0146 (6) | |
H3A | 1.0559 | 0.3692 | 0.2417 | 0.018* | |
C4 | 1.0110 (3) | 0.29379 (15) | 0.3489 (2) | 0.0144 (6) | |
C5 | 0.8720 (3) | 0.31994 (16) | 0.3217 (2) | 0.0167 (6) | |
H5A | 0.8369 | 0.3606 | 0.2688 | 0.020* | |
C6 | 0.7854 (3) | 0.28786 (16) | 0.3702 (2) | 0.0158 (6) | |
H6A | 0.6909 | 0.3058 | 0.3489 | 0.019* | |
C7 | 0.8350 (3) | 0.22904 (15) | 0.4506 (2) | 0.0137 (5) | |
C8 | 0.9737 (3) | 0.20268 (15) | 0.4779 (2) | 0.0137 (6) | |
H8A | 1.0089 | 0.1623 | 0.5313 | 0.016* | |
C9 | 1.0604 (3) | 0.23431 (15) | 0.4286 (2) | 0.0141 (5) | |
H9A | 1.1543 | 0.2157 | 0.4489 | 0.017* | |
C10 | 0.7473 (3) | 0.19340 (15) | 0.5051 (2) | 0.0138 (6) | |
H10A | 0.7887 | 0.1517 | 0.5548 | 0.017* | |
C11 | 0.6165 (3) | 0.21278 (15) | 0.4930 (2) | 0.0152 (6) | |
H11A | 0.5755 | 0.2576 | 0.4507 | 0.018* | |
C12 | 0.5322 (3) | 0.16709 (15) | 0.5429 (2) | 0.0141 (6) | |
C13 | 0.6192 (3) | 0.00035 (18) | 0.8551 (2) | 0.0309 (5) | |
H13A | 0.6482 | 0.0522 | 0.8739 | 0.037* | |
C14 | 0.6844 (4) | −0.05630 (18) | 0.9326 (3) | 0.0360 (6) | |
H14A | 0.7576 | −0.0436 | 1.0027 | 0.043* | |
C15 | 0.6423 (4) | −0.13168 (19) | 0.9073 (3) | 0.0345 (8) | |
H15A | 0.6827 | −0.1715 | 0.9607 | 0.041* | |
C16 | 0.5408 (4) | −0.14810 (19) | 0.8033 (3) | 0.0360 (6) | |
H16A | 0.5118 | −0.1996 | 0.7817 | 0.043* | |
C17 | 0.4820 (4) | −0.08740 (17) | 0.7307 (3) | 0.0309 (5) | |
H17A | 0.4116 | −0.0988 | 0.6588 | 0.037* | |
N2 | 1.0893 (3) | 0.05277 (14) | 0.3312 (2) | 0.0227 (6) | |
C19 | 1.1138 (3) | 0.09713 (18) | 0.2556 (3) | 0.0296 (7) | |
H19A | 1.2093 | 0.1091 | 0.2676 | 0.035* | |
C20 | 1.0086 (4) | 0.12641 (19) | 0.1615 (3) | 0.0344 (8) | |
H20A | 1.0309 | 0.1575 | 0.1095 | 0.041* | |
C21 | 0.8701 (3) | 0.1097 (2) | 0.1440 (3) | 0.0330 (8) | |
H21A | 0.7946 | 0.1296 | 0.0802 | 0.040* | |
C22 | 0.8431 (3) | 0.0636 (2) | 0.2209 (3) | 0.0343 (8) | |
H22A | 0.7485 | 0.0505 | 0.2102 | 0.041* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0178 (12) | 0.0153 (12) | 0.0166 (11) | 0.0013 (10) | 0.0073 (9) | 0.0012 (9) |
C18 | 0.0300 (17) | 0.0237 (16) | 0.0258 (16) | −0.0048 (13) | 0.0123 (14) | 0.0010 (13) |
Zn1 | 0.01274 (17) | 0.01317 (17) | 0.01527 (17) | 0.00028 (13) | 0.00828 (12) | 0.00003 (13) |
C1 | 0.0161 (14) | 0.0127 (14) | 0.0160 (13) | −0.0010 (11) | 0.0075 (11) | −0.0045 (11) |
O1 | 0.0132 (10) | 0.0198 (10) | 0.0219 (10) | 0.0013 (8) | 0.0088 (8) | 0.0035 (8) |
O2 | 0.0149 (9) | 0.0156 (9) | 0.0166 (9) | −0.0006 (8) | 0.0087 (8) | 0.0029 (8) |
O3 | 0.0166 (10) | 0.0215 (11) | 0.0244 (10) | 0.0026 (8) | 0.0130 (8) | 0.0056 (8) |
O4 | 0.0153 (9) | 0.0145 (10) | 0.0174 (9) | 0.0008 (8) | 0.0093 (8) | 0.0014 (8) |
O5 | 0.0181 (11) | 0.0179 (11) | 0.0179 (10) | 0.0039 (9) | 0.0058 (9) | −0.0049 (9) |
C2 | 0.0159 (14) | 0.0166 (14) | 0.0161 (13) | 0.0002 (11) | 0.0084 (11) | 0.0021 (11) |
C3 | 0.0156 (13) | 0.0154 (14) | 0.0128 (13) | −0.0010 (11) | 0.0055 (11) | 0.0009 (11) |
C4 | 0.0127 (13) | 0.0178 (14) | 0.0131 (13) | −0.0024 (11) | 0.0056 (11) | −0.0018 (11) |
C5 | 0.0175 (14) | 0.0161 (14) | 0.0157 (13) | −0.0014 (11) | 0.0056 (11) | 0.0032 (11) |
C6 | 0.0107 (13) | 0.0206 (15) | 0.0170 (13) | 0.0012 (11) | 0.0063 (11) | −0.0006 (11) |
C7 | 0.0124 (13) | 0.0158 (14) | 0.0134 (13) | −0.0030 (11) | 0.0053 (10) | −0.0021 (11) |
C8 | 0.0174 (14) | 0.0106 (13) | 0.0106 (12) | −0.0006 (11) | 0.0024 (11) | 0.0009 (10) |
C9 | 0.0110 (13) | 0.0157 (14) | 0.0157 (13) | 0.0002 (11) | 0.0054 (10) | −0.0028 (11) |
C10 | 0.0155 (13) | 0.0143 (14) | 0.0104 (12) | −0.0027 (11) | 0.0038 (10) | −0.0003 (10) |
C11 | 0.0190 (14) | 0.0118 (13) | 0.0163 (13) | −0.0007 (11) | 0.0082 (11) | 0.0016 (11) |
C12 | 0.0141 (14) | 0.0162 (14) | 0.0138 (13) | −0.0026 (11) | 0.0073 (11) | −0.0051 (11) |
C13 | 0.0386 (13) | 0.0196 (12) | 0.0240 (11) | −0.0022 (10) | 0.0002 (10) | −0.0009 (9) |
C14 | 0.0455 (14) | 0.0231 (12) | 0.0272 (12) | −0.0026 (11) | 0.0000 (11) | −0.0008 (10) |
C15 | 0.047 (2) | 0.0245 (17) | 0.0240 (16) | 0.0069 (15) | 0.0042 (15) | 0.0071 (13) |
C16 | 0.0455 (14) | 0.0231 (12) | 0.0272 (12) | −0.0026 (11) | 0.0000 (11) | −0.0008 (10) |
C17 | 0.0386 (13) | 0.0196 (12) | 0.0240 (11) | −0.0022 (10) | 0.0002 (10) | −0.0009 (9) |
N2 | 0.0251 (14) | 0.0194 (13) | 0.0230 (13) | 0.0037 (10) | 0.0084 (11) | −0.0013 (10) |
C19 | 0.0239 (16) | 0.0305 (18) | 0.0362 (18) | −0.0024 (14) | 0.0135 (14) | 0.0017 (14) |
C20 | 0.039 (2) | 0.0326 (19) | 0.0330 (18) | 0.0029 (15) | 0.0154 (15) | 0.0118 (15) |
C21 | 0.0267 (17) | 0.0352 (19) | 0.0313 (17) | 0.0053 (15) | 0.0042 (14) | 0.0083 (15) |
C22 | 0.0227 (17) | 0.039 (2) | 0.0382 (19) | −0.0055 (15) | 0.0081 (15) | 0.0018 (16) |
N1—C13 | 1.327 (4) | C5—H5A | 0.9500 |
N1—C17 | 1.332 (4) | C6—C7 | 1.402 (4) |
Zn1—N1 | 2.093 (2) | C6—H6A | 0.9500 |
C18—N2 | 1.336 (4) | C7—C8 | 1.401 (4) |
C18—C22 | 1.374 (4) | C7—C10 | 1.466 (4) |
C18—H18A | 0.9500 | C8—C9 | 1.382 (4) |
Zn1—O5 | 2.0288 (19) | C8—H8A | 0.9500 |
Zn1—O4 | 2.0324 (18) | C9—H9A | 0.9500 |
Zn1—O2i | 2.0368 (18) | C10—C11 | 1.328 (4) |
Zn1—O1i | 2.3019 (18) | C10—H10A | 0.9500 |
Zn1—O3 | 2.4099 (19) | C11—C12 | 1.484 (4) |
Zn1—C1i | 2.492 (3) | C11—H11A | 0.9500 |
Zn1—C12 | 2.560 (3) | C13—C14 | 1.377 (4) |
C1—O1 | 1.250 (3) | C13—H13A | 0.9500 |
C1—O2 | 1.273 (3) | C14—C15 | 1.378 (4) |
C1—C2 | 1.485 (4) | C14—H14A | 0.9500 |
C1—Zn1ii | 2.492 (3) | C15—C16 | 1.371 (4) |
O1—Zn1ii | 2.3019 (18) | C15—H15A | 0.9500 |
O2—Zn1ii | 2.0368 (18) | C16—C17 | 1.383 (4) |
O3—C12 | 1.241 (3) | C16—H16A | 0.9500 |
O4—C12 | 1.291 (3) | C17—H17A | 0.9500 |
O5—H2 | 0.864 (18) | N2—C19 | 1.334 (4) |
O5—H1 | 0.80 (4) | C19—C20 | 1.372 (4) |
C2—C3 | 1.333 (4) | C19—H19A | 0.9500 |
C2—H2A | 0.9500 | C20—C21 | 1.377 (5) |
C3—C4 | 1.466 (4) | C20—H20A | 0.9500 |
C3—H3A | 0.9500 | C21—C22 | 1.377 (5) |
C4—C5 | 1.403 (4) | C21—H21A | 0.9500 |
C4—C9 | 1.405 (4) | C22—H22A | 0.9500 |
C5—C6 | 1.377 (4) | ||
C13—N1—C17 | 116.8 (2) | C6—C5—C4 | 121.3 (2) |
C13—N1—Zn1 | 122.7 (2) | C6—C5—H5A | 119.3 |
C17—N1—Zn1 | 120.53 (19) | C4—C5—H5A | 119.3 |
N2—C18—C22 | 122.6 (3) | C5—C6—C7 | 120.8 (2) |
N2—C18—H18A | 118.7 | C5—C6—H6A | 119.6 |
C22—C18—H18A | 118.7 | C7—C6—H6A | 119.6 |
O5—Zn1—O4 | 101.20 (8) | C8—C7—C6 | 118.0 (2) |
O5—Zn1—O2i | 94.92 (8) | C8—C7—C10 | 119.1 (2) |
O4—Zn1—O2i | 148.85 (8) | C6—C7—C10 | 122.9 (2) |
N1—Zn1—O5 | 97.50 (9) | C9—C8—C7 | 121.3 (2) |
O4—Zn1—N1 | 99.25 (8) | C9—C8—H8A | 119.4 |
O2i—Zn1—N1 | 104.90 (8) | C7—C8—H8A | 119.4 |
O5—Zn1—O1i | 155.29 (8) | C8—C9—C4 | 120.6 (2) |
O4—Zn1—O1i | 99.78 (7) | C8—C9—H9A | 119.7 |
O1i—Zn1—O2i | 60.49 (7) | C4—C9—H9A | 119.7 |
N1—Zn1—O1i | 91.86 (8) | C11—C10—C7 | 127.3 (2) |
O5—Zn1—O3 | 95.57 (7) | C11—C10—H10A | 116.3 |
O3—Zn1—O4 | 58.64 (7) | C7—C10—H10A | 116.3 |
O2i—Zn1—O3 | 93.61 (7) | C10—C11—C12 | 122.5 (2) |
N1—Zn1—O3 | 156.24 (8) | C10—C11—H11A | 118.8 |
O1i—Zn1—O3 | 84.33 (7) | C12—C11—H11A | 118.8 |
O5—Zn1—C1i | 125.46 (8) | O3—C12—O4 | 120.6 (2) |
O4—Zn1—C1i | 125.88 (8) | O3—C12—C11 | 120.3 (2) |
O2i—Zn1—C1i | 30.61 (8) | O4—C12—C11 | 119.0 (2) |
N1—Zn1—C1i | 99.99 (8) | O3—C12—Zn1 | 68.89 (14) |
O1i—Zn1—C1i | 29.89 (7) | O4—C12—Zn1 | 51.76 (12) |
O3—Zn1—C1i | 88.32 (7) | C11—C12—Zn1 | 170.73 (19) |
O5—Zn1—C12 | 99.68 (8) | N1—C13—C14 | 123.2 (3) |
O4—Zn1—C12 | 29.91 (8) | N1—C13—H13A | 118.4 |
O2i—Zn1—C12 | 121.19 (8) | C14—C13—H13A | 118.4 |
N1—Zn1—C12 | 128.66 (9) | C13—C14—C15 | 119.1 (3) |
O1i—Zn1—C12 | 92.05 (7) | C13—C14—H14A | 120.4 |
O3—Zn1—C12 | 28.72 (7) | C15—C14—H14A | 120.4 |
C1i—Zn1—C12 | 108.13 (8) | C16—C15—C14 | 118.7 (3) |
O1—C1—O2 | 121.1 (2) | C16—C15—H15A | 120.7 |
O1—C1—C2 | 119.4 (2) | C14—C15—H15A | 120.7 |
O2—C1—C2 | 119.4 (2) | C15—C16—C17 | 118.0 (3) |
O1—C1—Zn1ii | 66.61 (14) | C15—C16—H16A | 121.0 |
O2—C1—Zn1ii | 54.53 (12) | C17—C16—H16A | 121.0 |
C2—C1—Zn1ii | 173.96 (19) | N1—C17—C16 | 124.2 (3) |
C1—O1—Zn1ii | 83.50 (15) | N1—C17—H17A | 117.9 |
C1—O2—Zn1ii | 94.86 (15) | C16—C17—H17A | 117.9 |
C12—O3—Zn1 | 82.39 (15) | C19—N2—C18 | 117.5 (3) |
C12—O4—Zn1 | 98.33 (15) | N2—C19—C20 | 123.5 (3) |
Zn1—O5—H2 | 121 (2) | N2—C19—H19A | 118.3 |
Zn1—O5—H1 | 125 (2) | C20—C19—H19A | 118.3 |
H2—O5—H1 | 105 (3) | C19—C20—C21 | 118.5 (3) |
C3—C2—C1 | 122.3 (3) | C19—C20—H20A | 120.7 |
C3—C2—H2A | 118.8 | C21—C20—H20A | 120.7 |
C1—C2—H2A | 118.8 | C20—C21—C22 | 118.7 (3) |
C2—C3—C4 | 127.2 (3) | C20—C21—H21A | 120.7 |
C2—C3—H3A | 116.4 | C22—C21—H21A | 120.7 |
C4—C3—H3A | 116.4 | C21—C22—C18 | 119.2 (3) |
C5—C4—C9 | 117.9 (2) | C21—C22—H22A | 120.4 |
C5—C4—C3 | 119.3 (2) | C18—C22—H22A | 120.4 |
C9—C4—C3 | 122.8 (2) |
Symmetry codes: (i) x−1, −y+1/2, z+1/2; (ii) x+1, −y+1/2, z−1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H1···O4iii | 0.80 (4) | 1.94 (4) | 2.743 (4) | 172 (4) |
Symmetry code: (iii) −x+1, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C12H8O4)(C5H5N)(H2O)]·C5H5N |
Mr | 457.77 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 110 |
a, b, c (Å) | 10.2132 (15), 17.375 (3), 12.8144 (19) |
β (°) | 112.360 (2) |
V (Å3) | 2103.0 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.20 |
Crystal size (mm) | 0.30 × 0.16 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART CCD |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.74, 0.85 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9012, 3657, 2923 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.035, 0.088, 1.05 |
No. of reflections | 3657 |
No. of parameters | 267 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.91, −0.81 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1998), SAINT (Sheldrick, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Zn1—N1 | 2.093 (2) | Zn1—O1i | 2.3019 (18) |
Zn1—O5 | 2.0288 (19) | Zn1—O3 | 2.4099 (19) |
Zn1—O4 | 2.0324 (18) | Zn1—C1i | 2.492 (3) |
Zn1—O2i | 2.0368 (18) | Zn1—C12 | 2.560 (3) |
N1—Zn1—O5 | 97.50 (9) | O3—Zn1—O4 | 58.64 (7) |
O1i—Zn1—O2i | 60.49 (7) |
Symmetry code: (i) x−1, −y+1/2, z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H1···O4ii | 0.80 (4) | 1.94 (4) | 2.743 (4) | 172 (4) |
Symmetry code: (ii) −x+1, −y, −z+1. |
Acknowledgements
The authors thank the NNSFC (No. 20701014), the Fundamental Research Funds for the Central Universities (2009ZM0030) and the SRP program of the SCUT for financial support.
References
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Metal-organic frameworks (MOFs) became one of the most active research areas in chemistry and materials in recent years due to their intriguing variety of architectures as well as promising applications as functional materials (Li et al., 2009; Zhang et al., 2010). One of the current interesting topics is to rationally design and synthesize coordination polymers and supramolecular organization by coordinated covalent bonds or supramolecular contacts (Zeng et al., 2010; Jose et al., 2010). Herein, we report the synthesis and characterization of a new metal organic framework with three-dimensional supramolecular structural motif. In the title compound, the ZnII center is six-coordinated in a distorted octahedral geometry (Figure 1), surrounded by O1, O2, O4 from two ppda2- ligand and O5 from a water molecule in the equatorial plane, and N1, O3 of pyridine molecule and ppda2- ligand respectively in the axial position. The ppda2- anion adopts a bridging coordination mode, interconnect with the zinc ions forming a 1-D infinite chain. The shortest distance between the neighbour zinc centers is 15.26 Å. The parallel chains are arranged into a two-dimensional network by intermolecular edge-to-face C—H···pi interactions (Figure 2). Two neighboring pyridine molecules from adjacent chains are parallel and form a dihedral angle of 58.1° with the plane of uncoordinated pyridine molecule. C—H···pi interactions exist between uncoordinated pyridine molecule and coordinated pyridine molecules. The C19—H19A and C22—H22A groups point to the center of adjacent pyridine rings, with H···centroid distances 2.9408 (3) and 3.3096 (5) Å. These two-dimensional networks are further linked via interlayer strong O—H···O hydrogen-bonding interactions, forming a three-dimensional supramolecular architecture with one-dimensional rectangle-shaped channels along the a direction (Figure 3). The H1···O4 distance is 1.8628Å and the O5—H1···O4 bond angle is 171.58°. Guest pyridine molecules are situated in the cavities.