organic compounds
5-[(E)-2-Bromobenzylidene]-8-(2-bromophenyl)-2-hydroxy-10-methyl-3,10-diazahexacyclo[10.7.1.13,7.02,11.07,11.016,20]henicosa-1(20),12,14,16,18-pentaen-6-one
aSchool of Chemical Sciences, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bInstitute for Research in Molecular Medicine, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and cX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
In the title compound, C33H26Br2N2O2, the piperidine group adopts an while the two pyrrolidine groups adopt half-chair and envelope conformations. The dihydroacenaphthylene group is almost planar, with a maximum deviation of 0.105 (1) Å. The dihedral angle between the two bromophenyl rings is 60.19 (8)°. An intramolecular O—H⋯N interaction is observed, generating an S(5) ring motif. The is stabilized by intermolecular C—H⋯O interactions. Short Br⋯Br [3.461 (1) Å] and Br⋯C [3.322 (2) Å] intermolecular contacts are observed, as well as π–π interactions [centroid–centroid distance = 3.793 (1) Å].
Related literature
For biological studies of five-membered heterocycles, pyrrolidines and piperidines, see: Shi et al. (2009); Nair & Suja (2007); Nájera & Sansano (2005); Coldham & Hufton (2005); Daly et al. (1986); El-Subbagh et al. (2000); Dimmock et al. (2001). For ring puckering analysis, see: Cremer & Pople (1975). For the graph-set description of hydrogen-bond ring motifs, see: Bernstein et al. (1995). For a closely related see: Kumar et al. (2010). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536810033295/wn2405sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810033295/wn2405Isup2.hkl
A mixture of 3,5-bis[(E)-(2-bromophenyl)methylidene]tetrahydro-4(1H)-pyridinone (0.100 g, 0.231 mmol), acenaphthenequinone (0.042 g, 0.231 mmol) and sarcosine (0.021 g, 0.231 mmol) was dissolved in methanol (10 ml) and refluxed for 1 hour. After completion of the reaction, as evident from TLC, the mixture was poured into water (50 ml). The precipitated solid was filtered, washed with water and recrystallised from a petroleum ether-ethyl acetate mixture (1:1) to yield the title compound as pale yellow crystals.
The H atom attached to O2 was located in a difference map and refined isotropically [O—H = 0.75 (3) Å]. The remaining H atoms were positioned geometrically and refined using a riding model [C—H = 0.93 Å for Csp2, 0.96 Å for methyl C, 0.97 Å for methylene C and 0.98 Å for methine C]; Uiso(H) = xUeq(C), where x = 1.5 for methyl H and 1.2 for all other H atoms. A rotating model was used for the methyl group.
Multi-component 1,3-dipolar
of ylidic species, such as with olefinic dipolarophiles, plays a key role in the construction of biologically active five-membered heterocycles (Shi et al., 2009; Nair et al., 2007; Nájera et al., 2005; Coldham et al., 2005). Highly substituted pyrrolidines have gained much importance since they form the central skeleton of many natural products (Daly et al., 1986). Heterocycles with the piperidine display important biological activities, such as cytotoxic and anticancer activities (El-Subbagh et al., 2000 ; Dimmock et al., 2001). Because of the biological importance of these heterocycles, the determination of the title compound was carried out and the results are presented in this paper.All geometrical parameters of the title compound (Fig.1) are within normal ranges and comparable with those in a previously reported structure (Kumar et al., 2010). The piperidine (N1/C8-C12) ring adopts an envelope confirmation [Q = 0.617 (2) Å, Θ = 44.6 (2)°, φ= 60.6 (2)°; Cremer & Pople, 1975]. The two five-membered pyrrolidine rings, (N1/C10-C11/C13-C14) and (N2/C10/C13/C25-C26), adopt half-chair and envelope comformations respectively [Q = 0.452 (2) Å, φ= 198.8 (2)° and Q = 0.401 (2) Å, φ= 352.9 (2)°]. The dihydroacenaphthylene group, (C13-C24) is almost planar, with a maximum deviation of 0.105 (1) Å for atom C13. The dihedral angle between the two bromophenyl rings (C1-C6) and (C27-C32) is 60.19 (8)°.
An intramolecular O2—H1O2···N2 hydrogen bond (Table 1) forms a five-membered ring, generating an S(5) hydrogen bond ring motif (Bernstein et al., 1995). In the π-π interactions with Cg1···Cg1 = 3.793 (1) Å, where Cg1 is the centroid of the C1-C6 benzene ring.
molecules are connected by intermolecular C—H···O hydrogen bonds (Table 1, Fig. 2). Short intermolecular contacts Br2···Br2 [3.461 (1)Å] and Br1···C29 [3.322 (2)Å] are also observed. The is further stabilized byFor biological studies of five-membered heterocycles, pyrrolidines and piperidines, see: Shi et al. (2009); Nair et al. (2007); Nájera et al. (2005); Coldham et al. (2005); Daly et al. (1986); El-Subbagh et al. (2000); Dimmock et al. (2001). For ring puckering analysis, see: Cremer & Pople (1975). For graph-set descriptions of hydrogen-bond ring motifs, see: Bernstein et al. (1995). For a closely related
see: Kumar et al. (2010). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C33H26Br2N2O2 | Z = 2 |
Mr = 642.38 | F(000) = 648 |
Triclinic, P1 | Dx = 1.657 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.3334 (14) Å | Cell parameters from 9995 reflections |
b = 12.4213 (19) Å | θ = 3.3–35.1° |
c = 12.8062 (19) Å | µ = 3.19 mm−1 |
α = 80.623 (4)° | T = 100 K |
β = 79.787 (4)° | Block, yellow |
γ = 88.213 (4)° | 0.52 × 0.41 × 0.19 mm |
V = 1287.2 (3) Å3 |
Bruker APEXII DUO CCD area-detector diffractometer | 9152 independent reflections |
Radiation source: fine-focus sealed tube | 8233 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.022 |
φ and ω scans | θmax = 32.5°, θmin = 3.1° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −12→12 |
Tmin = 0.288, Tmax = 0.584 | k = −18→18 |
27238 measured reflections | l = −19→19 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.026 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.105 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.18 | w = 1/[σ2(Fo2) + (0.0672P)2 + 0.2037P] where P = (Fo2 + 2Fc2)/3 |
9152 reflections | (Δ/σ)max = 0.004 |
357 parameters | Δρmax = 0.99 e Å−3 |
0 restraints | Δρmin = −1.17 e Å−3 |
C33H26Br2N2O2 | γ = 88.213 (4)° |
Mr = 642.38 | V = 1287.2 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.3334 (14) Å | Mo Kα radiation |
b = 12.4213 (19) Å | µ = 3.19 mm−1 |
c = 12.8062 (19) Å | T = 100 K |
α = 80.623 (4)° | 0.52 × 0.41 × 0.19 mm |
β = 79.787 (4)° |
Bruker APEXII DUO CCD area-detector diffractometer | 9152 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 8233 reflections with I > 2σ(I) |
Tmin = 0.288, Tmax = 0.584 | Rint = 0.022 |
27238 measured reflections |
R[F2 > 2σ(F2)] = 0.026 | 0 restraints |
wR(F2) = 0.105 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.18 | Δρmax = 0.99 e Å−3 |
9152 reflections | Δρmin = −1.17 e Å−3 |
357 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | 0.856585 (19) | 1.068250 (12) | 0.386199 (13) | 0.01626 (5) | |
Br2 | 1.025391 (18) | 0.886819 (12) | −0.064263 (12) | 0.01437 (5) | |
O1 | 0.65922 (15) | 0.94414 (9) | 0.09019 (9) | 0.0152 (2) | |
O2 | 0.55092 (14) | 0.49704 (9) | 0.16200 (10) | 0.0131 (2) | |
N1 | 0.70944 (16) | 0.61925 (10) | 0.22074 (10) | 0.0111 (2) | |
N2 | 0.45256 (16) | 0.66041 (10) | 0.02417 (10) | 0.0109 (2) | |
C1 | 0.5433 (2) | 0.80453 (13) | 0.49862 (13) | 0.0169 (3) | |
H1A | 0.4852 | 0.7568 | 0.4705 | 0.020* | |
C2 | 0.5306 (2) | 0.79520 (14) | 0.60979 (14) | 0.0193 (3) | |
H2A | 0.4666 | 0.7406 | 0.6551 | 0.023* | |
C3 | 0.6137 (2) | 0.86754 (14) | 0.65250 (13) | 0.0193 (3) | |
H3A | 0.6054 | 0.8614 | 0.7266 | 0.023* | |
C4 | 0.7092 (2) | 0.94912 (13) | 0.58513 (13) | 0.0173 (3) | |
H4A | 0.7636 | 0.9985 | 0.6138 | 0.021* | |
C5 | 0.72276 (19) | 0.95632 (12) | 0.47468 (12) | 0.0131 (2) | |
C6 | 0.64227 (19) | 0.88461 (12) | 0.42811 (12) | 0.0132 (2) | |
C7 | 0.65161 (19) | 0.89702 (12) | 0.31078 (12) | 0.0139 (3) | |
H7A | 0.6384 | 0.9672 | 0.2749 | 0.017* | |
C8 | 0.67730 (18) | 0.81722 (12) | 0.25027 (12) | 0.0124 (2) | |
C9 | 0.67026 (18) | 0.84990 (12) | 0.13230 (12) | 0.0117 (2) | |
C10 | 0.66598 (17) | 0.75367 (11) | 0.07288 (11) | 0.0104 (2) | |
C11 | 0.78932 (18) | 0.66652 (12) | 0.11188 (12) | 0.0122 (2) | |
H11A | 0.8086 | 0.6113 | 0.0655 | 0.015* | |
H11B | 0.8924 | 0.6998 | 0.1134 | 0.015* | |
C12 | 0.71804 (19) | 0.69952 (12) | 0.29215 (12) | 0.0135 (2) | |
H12A | 0.8275 | 0.6978 | 0.3084 | 0.016* | |
H12B | 0.6443 | 0.6764 | 0.3592 | 0.016* | |
C13 | 0.49859 (17) | 0.69498 (11) | 0.11969 (11) | 0.0101 (2) | |
C14 | 0.54394 (17) | 0.59505 (11) | 0.20430 (11) | 0.0106 (2) | |
C15 | 0.41293 (18) | 0.59321 (12) | 0.30260 (12) | 0.0115 (2) | |
C16 | 0.3780 (2) | 0.52059 (13) | 0.39629 (13) | 0.0161 (3) | |
H16A | 0.4395 | 0.4573 | 0.4076 | 0.019* | |
C17 | 0.2453 (2) | 0.54430 (14) | 0.47598 (13) | 0.0189 (3) | |
H17A | 0.2209 | 0.4953 | 0.5397 | 0.023* | |
C18 | 0.1516 (2) | 0.63738 (14) | 0.46208 (13) | 0.0182 (3) | |
H18A | 0.0664 | 0.6506 | 0.5161 | 0.022* | |
C19 | 0.18568 (19) | 0.71303 (12) | 0.36501 (12) | 0.0137 (2) | |
C20 | 0.10036 (19) | 0.81138 (13) | 0.33826 (13) | 0.0153 (3) | |
H20A | 0.0130 | 0.8321 | 0.3869 | 0.018* | |
C21 | 0.14739 (19) | 0.87631 (12) | 0.23970 (13) | 0.0148 (3) | |
H21A | 0.0902 | 0.9406 | 0.2237 | 0.018* | |
C22 | 0.27944 (18) | 0.84897 (12) | 0.16176 (12) | 0.0128 (2) | |
H22A | 0.3084 | 0.8945 | 0.0962 | 0.015* | |
C23 | 0.36326 (17) | 0.75363 (11) | 0.18568 (11) | 0.0106 (2) | |
C24 | 0.31619 (18) | 0.68768 (12) | 0.28712 (12) | 0.0113 (2) | |
C25 | 0.50120 (18) | 0.75089 (12) | −0.06406 (12) | 0.0128 (2) | |
H25A | 0.4250 | 0.8112 | −0.0589 | 0.015* | |
H25B | 0.5053 | 0.7274 | −0.1331 | 0.015* | |
C26 | 0.67185 (18) | 0.78475 (12) | −0.05064 (11) | 0.0112 (2) | |
H26A | 0.6810 | 0.8643 | −0.0699 | 0.013* | |
C27 | 0.81308 (18) | 0.73321 (12) | −0.11802 (11) | 0.0117 (2) | |
C28 | 0.97428 (18) | 0.76858 (12) | −0.12970 (12) | 0.0120 (2) | |
C29 | 1.10552 (19) | 0.72043 (13) | −0.18784 (12) | 0.0149 (3) | |
H29A | 1.2106 | 0.7463 | −0.1930 | 0.018* | |
C30 | 1.0790 (2) | 0.63323 (13) | −0.23832 (13) | 0.0173 (3) | |
H30A | 1.1661 | 0.5992 | −0.2762 | 0.021* | |
C31 | 0.9204 (2) | 0.59773 (13) | −0.23128 (13) | 0.0170 (3) | |
H31A | 0.9011 | 0.5409 | −0.2666 | 0.020* | |
C32 | 0.7901 (2) | 0.64644 (13) | −0.17176 (12) | 0.0150 (3) | |
H32A | 0.6851 | 0.6208 | −0.1675 | 0.018* | |
C33 | 0.28025 (18) | 0.63124 (12) | 0.03566 (12) | 0.0132 (2) | |
H33A | 0.2641 | 0.6003 | −0.0257 | 0.020* | |
H33B | 0.2139 | 0.6954 | 0.0405 | 0.020* | |
H33C | 0.2501 | 0.5789 | 0.0997 | 0.020* | |
H1O2 | 0.547 (4) | 0.516 (2) | 0.104 (2) | 0.028 (7)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.01810 (8) | 0.01305 (8) | 0.01711 (8) | −0.00218 (5) | −0.00054 (6) | −0.00328 (6) |
Br2 | 0.01454 (8) | 0.01177 (8) | 0.01788 (8) | −0.00154 (5) | −0.00447 (5) | −0.00345 (5) |
O1 | 0.0200 (5) | 0.0107 (4) | 0.0152 (5) | −0.0001 (4) | −0.0042 (4) | −0.0015 (4) |
O2 | 0.0173 (5) | 0.0089 (4) | 0.0143 (5) | 0.0019 (4) | −0.0043 (4) | −0.0039 (4) |
N1 | 0.0120 (5) | 0.0103 (5) | 0.0112 (5) | 0.0008 (4) | −0.0027 (4) | −0.0017 (4) |
N2 | 0.0113 (5) | 0.0117 (5) | 0.0100 (5) | −0.0005 (4) | −0.0021 (4) | −0.0017 (4) |
C1 | 0.0182 (7) | 0.0154 (6) | 0.0167 (7) | −0.0008 (5) | −0.0006 (5) | −0.0035 (5) |
C2 | 0.0225 (7) | 0.0163 (7) | 0.0164 (7) | −0.0009 (6) | 0.0025 (6) | −0.0006 (5) |
C3 | 0.0255 (8) | 0.0194 (7) | 0.0124 (6) | 0.0030 (6) | −0.0032 (6) | −0.0016 (5) |
C4 | 0.0206 (7) | 0.0176 (7) | 0.0148 (6) | 0.0013 (5) | −0.0045 (5) | −0.0048 (5) |
C5 | 0.0141 (6) | 0.0113 (6) | 0.0137 (6) | 0.0014 (5) | −0.0021 (5) | −0.0024 (5) |
C6 | 0.0149 (6) | 0.0122 (6) | 0.0126 (6) | 0.0016 (5) | −0.0020 (5) | −0.0031 (5) |
C7 | 0.0155 (6) | 0.0122 (6) | 0.0143 (6) | 0.0001 (5) | −0.0031 (5) | −0.0027 (5) |
C8 | 0.0138 (6) | 0.0114 (6) | 0.0125 (6) | −0.0003 (5) | −0.0035 (5) | −0.0021 (5) |
C9 | 0.0107 (6) | 0.0115 (6) | 0.0135 (6) | −0.0013 (4) | −0.0026 (5) | −0.0031 (5) |
C10 | 0.0110 (5) | 0.0094 (5) | 0.0107 (6) | 0.0002 (4) | −0.0019 (4) | −0.0016 (4) |
C11 | 0.0111 (6) | 0.0120 (6) | 0.0131 (6) | 0.0015 (5) | −0.0028 (5) | −0.0008 (5) |
C12 | 0.0167 (6) | 0.0115 (6) | 0.0135 (6) | −0.0003 (5) | −0.0058 (5) | −0.0026 (5) |
C13 | 0.0112 (5) | 0.0083 (5) | 0.0105 (5) | 0.0008 (4) | −0.0014 (4) | −0.0011 (4) |
C14 | 0.0118 (6) | 0.0081 (5) | 0.0124 (6) | 0.0010 (4) | −0.0029 (4) | −0.0024 (4) |
C15 | 0.0122 (6) | 0.0103 (5) | 0.0118 (6) | 0.0002 (4) | −0.0018 (5) | −0.0011 (4) |
C16 | 0.0190 (7) | 0.0131 (6) | 0.0151 (6) | 0.0017 (5) | −0.0027 (5) | 0.0004 (5) |
C17 | 0.0198 (7) | 0.0188 (7) | 0.0146 (7) | 0.0006 (6) | 0.0007 (5) | 0.0031 (5) |
C18 | 0.0180 (7) | 0.0197 (7) | 0.0142 (6) | 0.0014 (6) | 0.0019 (5) | −0.0002 (5) |
C19 | 0.0133 (6) | 0.0135 (6) | 0.0141 (6) | 0.0007 (5) | −0.0009 (5) | −0.0031 (5) |
C20 | 0.0139 (6) | 0.0151 (6) | 0.0175 (7) | 0.0030 (5) | −0.0019 (5) | −0.0059 (5) |
C21 | 0.0145 (6) | 0.0130 (6) | 0.0178 (7) | 0.0042 (5) | −0.0039 (5) | −0.0045 (5) |
C22 | 0.0142 (6) | 0.0108 (6) | 0.0137 (6) | 0.0017 (5) | −0.0037 (5) | −0.0015 (5) |
C23 | 0.0109 (5) | 0.0095 (5) | 0.0116 (6) | 0.0008 (4) | −0.0022 (4) | −0.0024 (4) |
C24 | 0.0115 (6) | 0.0105 (5) | 0.0121 (6) | 0.0005 (4) | −0.0025 (5) | −0.0017 (5) |
C25 | 0.0126 (6) | 0.0140 (6) | 0.0112 (6) | −0.0001 (5) | −0.0024 (5) | −0.0002 (5) |
C26 | 0.0119 (6) | 0.0109 (5) | 0.0104 (6) | 0.0003 (4) | −0.0017 (4) | −0.0012 (4) |
C27 | 0.0132 (6) | 0.0110 (6) | 0.0104 (6) | −0.0011 (5) | −0.0011 (5) | −0.0010 (4) |
C28 | 0.0136 (6) | 0.0104 (6) | 0.0117 (6) | 0.0001 (5) | −0.0022 (5) | −0.0013 (5) |
C29 | 0.0132 (6) | 0.0157 (6) | 0.0147 (6) | 0.0007 (5) | −0.0006 (5) | −0.0014 (5) |
C30 | 0.0191 (7) | 0.0164 (7) | 0.0158 (7) | 0.0023 (5) | 0.0000 (5) | −0.0041 (5) |
C31 | 0.0211 (7) | 0.0141 (6) | 0.0159 (6) | −0.0006 (5) | −0.0009 (5) | −0.0053 (5) |
C32 | 0.0160 (6) | 0.0143 (6) | 0.0147 (6) | −0.0029 (5) | −0.0004 (5) | −0.0046 (5) |
C33 | 0.0113 (6) | 0.0137 (6) | 0.0149 (6) | −0.0007 (5) | −0.0022 (5) | −0.0037 (5) |
Br1—C5 | 1.8963 (15) | C14—C15 | 1.511 (2) |
Br2—C28 | 1.8993 (15) | C15—C16 | 1.370 (2) |
O1—C9 | 1.2144 (18) | C15—C24 | 1.410 (2) |
O2—C14 | 1.4065 (17) | C16—C17 | 1.424 (2) |
O2—H1O2 | 0.75 (3) | C16—H16A | 0.9300 |
N1—C11 | 1.4697 (19) | C17—C18 | 1.380 (2) |
N1—C12 | 1.4698 (19) | C17—H17A | 0.9300 |
N1—C14 | 1.4785 (19) | C18—C19 | 1.421 (2) |
N2—C33 | 1.4680 (19) | C18—H18A | 0.9300 |
N2—C25 | 1.4684 (19) | C19—C24 | 1.405 (2) |
N2—C13 | 1.4750 (19) | C19—C20 | 1.418 (2) |
C1—C2 | 1.395 (2) | C20—C21 | 1.382 (2) |
C1—C6 | 1.407 (2) | C20—H20A | 0.9300 |
C1—H1A | 0.9300 | C21—C22 | 1.421 (2) |
C2—C3 | 1.385 (3) | C21—H21A | 0.9300 |
C2—H2A | 0.9300 | C22—C23 | 1.3749 (19) |
C3—C4 | 1.388 (2) | C22—H22A | 0.9300 |
C3—H3A | 0.9300 | C23—C24 | 1.416 (2) |
C4—C5 | 1.387 (2) | C25—C26 | 1.542 (2) |
C4—H4A | 0.9300 | C25—H25A | 0.9700 |
C5—C6 | 1.397 (2) | C25—H25B | 0.9700 |
C6—C7 | 1.474 (2) | C26—C27 | 1.521 (2) |
C7—C8 | 1.344 (2) | C26—H26A | 0.9800 |
C7—H7A | 0.9300 | C27—C28 | 1.402 (2) |
C8—C9 | 1.510 (2) | C27—C32 | 1.405 (2) |
C8—C12 | 1.523 (2) | C28—C29 | 1.387 (2) |
C9—C10 | 1.522 (2) | C29—C30 | 1.391 (2) |
C10—C11 | 1.554 (2) | C29—H29A | 0.9300 |
C10—C26 | 1.558 (2) | C30—C31 | 1.389 (2) |
C10—C13 | 1.569 (2) | C30—H30A | 0.9300 |
C11—H11A | 0.9700 | C31—C32 | 1.394 (2) |
C11—H11B | 0.9700 | C31—H31A | 0.9300 |
C12—H12A | 0.9700 | C32—H32A | 0.9300 |
C12—H12B | 0.9700 | C33—H33A | 0.9600 |
C13—C23 | 1.526 (2) | C33—H33B | 0.9600 |
C13—C14 | 1.592 (2) | C33—H33C | 0.9600 |
C14—O2—H1O2 | 103 (2) | C16—C15—C14 | 132.30 (13) |
C11—N1—C12 | 108.02 (12) | C24—C15—C14 | 108.17 (12) |
C11—N1—C14 | 102.44 (11) | C15—C16—C17 | 118.42 (14) |
C12—N1—C14 | 115.63 (11) | C15—C16—H16A | 120.8 |
C33—N2—C25 | 112.31 (12) | C17—C16—H16A | 120.8 |
C33—N2—C13 | 114.95 (12) | C18—C17—C16 | 122.38 (15) |
C25—N2—C13 | 105.24 (11) | C18—C17—H17A | 118.8 |
C2—C1—C6 | 121.38 (16) | C16—C17—H17A | 118.8 |
C2—C1—H1A | 119.3 | C17—C18—C19 | 119.82 (14) |
C6—C1—H1A | 119.3 | C17—C18—H18A | 120.1 |
C3—C2—C1 | 119.73 (16) | C19—C18—H18A | 120.1 |
C3—C2—H2A | 120.1 | C24—C19—C20 | 116.51 (14) |
C1—C2—H2A | 120.1 | C24—C19—C18 | 116.89 (14) |
C2—C3—C4 | 120.28 (15) | C20—C19—C18 | 126.60 (14) |
C2—C3—H3A | 119.9 | C21—C20—C19 | 119.84 (14) |
C4—C3—H3A | 119.9 | C21—C20—H20A | 120.1 |
C5—C4—C3 | 119.32 (15) | C19—C20—H20A | 120.1 |
C5—C4—H4A | 120.3 | C20—C21—C22 | 122.79 (14) |
C3—C4—H4A | 120.3 | C20—C21—H21A | 118.6 |
C4—C5—C6 | 122.33 (14) | C22—C21—H21A | 118.6 |
C4—C5—Br1 | 117.66 (12) | C23—C22—C21 | 118.38 (14) |
C6—C5—Br1 | 120.00 (11) | C23—C22—H22A | 120.8 |
C5—C6—C1 | 116.92 (14) | C21—C22—H22A | 120.8 |
C5—C6—C7 | 121.47 (14) | C22—C23—C24 | 118.82 (13) |
C1—C6—C7 | 121.48 (14) | C22—C23—C13 | 132.51 (13) |
C8—C7—C6 | 126.64 (14) | C24—C23—C13 | 108.52 (12) |
C8—C7—H7A | 116.7 | C19—C24—C15 | 122.94 (13) |
C6—C7—H7A | 116.7 | C19—C24—C23 | 123.65 (13) |
C7—C8—C9 | 116.44 (13) | C15—C24—C23 | 113.41 (13) |
C7—C8—C12 | 124.44 (14) | N2—C25—C26 | 105.15 (11) |
C9—C8—C12 | 119.08 (12) | N2—C25—H25A | 110.7 |
O1—C9—C8 | 122.98 (13) | C26—C25—H25A | 110.7 |
O1—C9—C10 | 123.03 (13) | N2—C25—H25B | 110.7 |
C8—C9—C10 | 113.85 (12) | C26—C25—H25B | 110.7 |
C9—C10—C11 | 108.11 (12) | H25A—C25—H25B | 108.8 |
C9—C10—C26 | 114.98 (11) | C27—C26—C25 | 114.83 (12) |
C11—C10—C26 | 117.57 (11) | C27—C26—C10 | 113.94 (12) |
C9—C10—C13 | 106.44 (11) | C25—C26—C10 | 102.43 (11) |
C11—C10—C13 | 101.86 (11) | C27—C26—H26A | 108.4 |
C26—C10—C13 | 106.49 (11) | C25—C26—H26A | 108.4 |
N1—C11—C10 | 104.01 (11) | C10—C26—H26A | 108.4 |
N1—C11—H11A | 111.0 | C28—C27—C32 | 115.83 (13) |
C10—C11—H11A | 111.0 | C28—C27—C26 | 122.18 (13) |
N1—C11—H11B | 111.0 | C32—C27—C26 | 121.98 (13) |
C10—C11—H11B | 111.0 | C29—C28—C27 | 123.13 (14) |
H11A—C11—H11B | 109.0 | C29—C28—Br2 | 115.84 (11) |
N1—C12—C8 | 116.67 (12) | C27—C28—Br2 | 121.03 (11) |
N1—C12—H12A | 108.1 | C28—C29—C30 | 119.60 (15) |
C8—C12—H12A | 108.1 | C28—C29—H29A | 120.2 |
N1—C12—H12B | 108.1 | C30—C29—H29A | 120.2 |
C8—C12—H12B | 108.1 | C31—C30—C29 | 119.04 (15) |
H12A—C12—H12B | 107.3 | C31—C30—H30A | 120.5 |
N2—C13—C23 | 114.26 (12) | C29—C30—H30A | 120.5 |
N2—C13—C10 | 102.66 (11) | C30—C31—C32 | 120.60 (15) |
C23—C13—C10 | 119.66 (11) | C30—C31—H31A | 119.7 |
N2—C13—C14 | 112.84 (11) | C32—C31—H31A | 119.7 |
C23—C13—C14 | 103.45 (11) | C31—C32—C27 | 121.75 (15) |
C10—C13—C14 | 103.78 (11) | C31—C32—H32A | 119.1 |
O2—C14—N1 | 108.22 (11) | C27—C32—H32A | 119.1 |
O2—C14—C15 | 112.29 (12) | N2—C33—H33A | 109.5 |
N1—C14—C15 | 114.63 (12) | N2—C33—H33B | 109.5 |
O2—C14—C13 | 110.91 (11) | H33A—C33—H33B | 109.5 |
N1—C14—C13 | 105.17 (11) | N2—C33—H33C | 109.5 |
C15—C14—C13 | 105.37 (11) | H33A—C33—H33C | 109.5 |
C16—C15—C24 | 119.53 (14) | H33B—C33—H33C | 109.5 |
C6—C1—C2—C3 | 1.5 (3) | C10—C13—C14—C15 | 135.81 (11) |
C1—C2—C3—C4 | 0.0 (3) | O2—C14—C15—C16 | 51.9 (2) |
C2—C3—C4—C5 | −1.0 (3) | N1—C14—C15—C16 | −72.2 (2) |
C3—C4—C5—C6 | 0.5 (2) | C13—C14—C15—C16 | 172.71 (16) |
C3—C4—C5—Br1 | −179.35 (13) | O2—C14—C15—C24 | −128.68 (13) |
C4—C5—C6—C1 | 1.0 (2) | N1—C14—C15—C24 | 107.29 (14) |
Br1—C5—C6—C1 | −179.16 (11) | C13—C14—C15—C24 | −7.84 (15) |
C4—C5—C6—C7 | 176.88 (15) | C24—C15—C16—C17 | −0.9 (2) |
Br1—C5—C6—C7 | −3.2 (2) | C14—C15—C16—C17 | 178.52 (16) |
C2—C1—C6—C5 | −2.0 (2) | C15—C16—C17—C18 | −0.1 (3) |
C2—C1—C6—C7 | −177.90 (15) | C16—C17—C18—C19 | 0.5 (3) |
C5—C6—C7—C8 | 135.05 (17) | C17—C18—C19—C24 | 0.0 (2) |
C1—C6—C7—C8 | −49.2 (2) | C17—C18—C19—C20 | 179.44 (16) |
C6—C7—C8—C9 | 175.99 (14) | C24—C19—C20—C21 | 0.0 (2) |
C6—C7—C8—C12 | −6.2 (3) | C18—C19—C20—C21 | −179.40 (16) |
C7—C8—C9—O1 | 7.5 (2) | C19—C20—C21—C22 | 0.2 (2) |
C12—C8—C9—O1 | −170.38 (14) | C20—C21—C22—C23 | 0.2 (2) |
C7—C8—C9—C10 | −168.33 (13) | C21—C22—C23—C24 | −0.9 (2) |
C12—C8—C9—C10 | 13.77 (19) | C21—C22—C23—C13 | 174.12 (15) |
O1—C9—C10—C11 | 142.12 (15) | N2—C13—C23—C22 | −61.5 (2) |
C8—C9—C10—C11 | −42.03 (16) | C10—C13—C23—C22 | 60.7 (2) |
O1—C9—C10—C26 | 8.5 (2) | C14—C13—C23—C22 | 175.42 (15) |
C8—C9—C10—C26 | −175.62 (12) | N2—C13—C23—C24 | 113.85 (13) |
O1—C9—C10—C13 | −109.10 (16) | C10—C13—C23—C24 | −123.91 (13) |
C8—C9—C10—C13 | 66.74 (15) | C14—C13—C23—C24 | −9.21 (15) |
C12—N1—C11—C10 | −73.52 (14) | C20—C19—C24—C15 | 179.51 (14) |
C14—N1—C11—C10 | 49.00 (13) | C18—C19—C24—C15 | −1.0 (2) |
C9—C10—C11—N1 | 73.21 (14) | C20—C19—C24—C23 | −0.8 (2) |
C26—C10—C11—N1 | −154.57 (12) | C18—C19—C24—C23 | 178.75 (15) |
C13—C10—C11—N1 | −38.68 (13) | C16—C15—C24—C19 | 1.5 (2) |
C11—N1—C12—C8 | 44.67 (17) | C14—C15—C24—C19 | −178.07 (14) |
C14—N1—C12—C8 | −69.37 (17) | C16—C15—C24—C23 | −178.31 (14) |
C7—C8—C12—N1 | 168.00 (15) | C14—C15—C24—C23 | 2.16 (17) |
C9—C8—C12—N1 | −14.3 (2) | C22—C23—C24—C19 | 1.2 (2) |
C33—N2—C13—C23 | −31.95 (17) | C13—C23—C24—C19 | −174.92 (14) |
C25—N2—C13—C23 | 92.16 (14) | C22—C23—C24—C15 | −179.05 (14) |
C33—N2—C13—C10 | −163.06 (11) | C13—C23—C24—C15 | 4.84 (17) |
C25—N2—C13—C10 | −38.96 (13) | C33—N2—C25—C26 | 169.39 (11) |
C33—N2—C13—C14 | 85.87 (14) | C13—N2—C25—C26 | 43.64 (14) |
C25—N2—C13—C14 | −150.02 (12) | N2—C25—C26—C27 | 95.36 (14) |
C9—C10—C13—N2 | 143.27 (11) | N2—C25—C26—C10 | −28.69 (13) |
C11—C10—C13—N2 | −103.58 (12) | C9—C10—C26—C27 | 122.63 (13) |
C26—C10—C13—N2 | 20.15 (13) | C11—C10—C26—C27 | −6.42 (18) |
C9—C10—C13—C23 | 15.49 (17) | C13—C10—C26—C27 | −119.76 (13) |
C11—C10—C13—C23 | 128.64 (13) | C9—C10—C26—C25 | −112.74 (13) |
C26—C10—C13—C23 | −107.63 (14) | C11—C10—C26—C25 | 118.21 (13) |
C9—C10—C13—C14 | −99.04 (12) | C13—C10—C26—C25 | 4.87 (13) |
C11—C10—C13—C14 | 14.11 (13) | C25—C26—C27—C28 | 168.94 (13) |
C26—C10—C13—C14 | 137.84 (11) | C10—C26—C27—C28 | −73.35 (17) |
C11—N1—C14—O2 | 79.77 (13) | C25—C26—C27—C32 | −11.6 (2) |
C12—N1—C14—O2 | −163.02 (12) | C10—C26—C27—C32 | 106.11 (16) |
C11—N1—C14—C15 | −154.06 (12) | C32—C27—C28—C29 | −1.7 (2) |
C12—N1—C14—C15 | −36.85 (17) | C26—C27—C28—C29 | 177.82 (14) |
C11—N1—C14—C13 | −38.81 (13) | C32—C27—C28—Br2 | 178.85 (11) |
C12—N1—C14—C13 | 78.40 (14) | C26—C27—C28—Br2 | −1.7 (2) |
N2—C13—C14—O2 | 7.93 (16) | C27—C28—C29—C30 | 0.5 (2) |
C23—C13—C14—O2 | 131.93 (12) | Br2—C28—C29—C30 | 179.96 (12) |
C10—C13—C14—O2 | −102.44 (13) | C28—C29—C30—C31 | 1.4 (2) |
N2—C13—C14—N1 | 124.69 (12) | C29—C30—C31—C32 | −2.0 (3) |
C23—C13—C14—N1 | −111.31 (12) | C30—C31—C32—C27 | 0.7 (3) |
C10—C13—C14—N1 | 14.32 (13) | C28—C27—C32—C31 | 1.1 (2) |
N2—C13—C14—C15 | −113.81 (13) | C26—C27—C32—C31 | −178.41 (15) |
C23—C13—C14—C15 | 10.19 (14) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···N2 | 0.75 (3) | 2.12 (3) | 2.6735 (18) | 132 (3) |
C32—H32A···O2i | 0.93 | 2.47 | 3.374 (2) | 163 |
C33—H33A···O2i | 0.96 | 2.55 | 3.292 (2) | 134 |
Symmetry code: (i) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | C33H26Br2N2O2 |
Mr | 642.38 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 8.3334 (14), 12.4213 (19), 12.8062 (19) |
α, β, γ (°) | 80.623 (4), 79.787 (4), 88.213 (4) |
V (Å3) | 1287.2 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 3.19 |
Crystal size (mm) | 0.52 × 0.41 × 0.19 |
Data collection | |
Diffractometer | Bruker APEXII DUO CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.288, 0.584 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 27238, 9152, 8233 |
Rint | 0.022 |
(sin θ/λ)max (Å−1) | 0.756 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.026, 0.105, 1.18 |
No. of reflections | 9152 |
No. of parameters | 357 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.99, −1.17 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···N2 | 0.75 (3) | 2.12 (3) | 2.6735 (18) | 132 (3) |
C32—H32A···O2i | 0.93 | 2.47 | 3.374 (2) | 163 |
C33—H33A···O2i | 0.96 | 2.55 | 3.292 (2) | 134 |
Symmetry code: (i) −x+1, −y+1, −z. |
Acknowledgements
The synthetic chemistry work was funded by Universiti Sains Malaysia (USM) under University Research Grant No. 1001/PKIMIA/811016 and RSK thanks Universiti Sains Malaysia for the award of a post-doctoral fellowship. HKF thanks Universiti Sains Malaysia for the Research University Grant No. 1001/PFIZIK/811160.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Multi-component 1,3-dipolar cycloaddition of ylidic species, such as azomethine ylides with olefinic dipolarophiles, plays a key role in the construction of biologically active five-membered heterocycles (Shi et al., 2009; Nair et al., 2007; Nájera et al., 2005; Coldham et al., 2005). Highly substituted pyrrolidines have gained much importance since they form the central skeleton of many natural products (Daly et al., 1986). Heterocycles with the piperidine substructure display important biological activities, such as cytotoxic and anticancer activities (El-Subbagh et al., 2000 ; Dimmock et al., 2001). Because of the biological importance of these heterocycles, the crystal structure determination of the title compound was carried out and the results are presented in this paper.
All geometrical parameters of the title compound (Fig.1) are within normal ranges and comparable with those in a previously reported structure (Kumar et al., 2010). The piperidine (N1/C8-C12) ring adopts an envelope confirmation [Q = 0.617 (2) Å, Θ = 44.6 (2)°, φ= 60.6 (2)°; Cremer & Pople, 1975]. The two five-membered pyrrolidine rings, (N1/C10-C11/C13-C14) and (N2/C10/C13/C25-C26), adopt half-chair and envelope comformations respectively [Q = 0.452 (2) Å, φ= 198.8 (2)° and Q = 0.401 (2) Å, φ= 352.9 (2)°]. The dihydroacenaphthylene group, (C13-C24) is almost planar, with a maximum deviation of 0.105 (1) Å for atom C13. The dihedral angle between the two bromophenyl rings (C1-C6) and (C27-C32) is 60.19 (8)°.
An intramolecular O2—H1O2···N2 hydrogen bond (Table 1) forms a five-membered ring, generating an S(5) hydrogen bond ring motif (Bernstein et al., 1995). In the crystal structure, molecules are connected by intermolecular C—H···O hydrogen bonds (Table 1, Fig. 2). Short intermolecular contacts Br2···Br2 [3.461 (1)Å] and Br1···C29 [3.322 (2)Å] are also observed. The crystal structure is further stabilized by π-π interactions with Cg1···Cg1 = 3.793 (1) Å, where Cg1 is the centroid of the C1-C6 benzene ring.