metal-organic compounds
Diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato-κ2N3,O4)cadmium(II) 3.5-hydrate
aCollege of Food Science and Technology, Guangdong Ocean University, Zhanjiang 524088, People's Republic of China, bCollege of Science, Guangdong Ocean University, Zhanjiang 524088, People's Republic of China, and cCollege of Medical Laboratory, Hebei North University, Zhangjiakou 075000, People's Republic of China
*Correspondence e-mail: songwd60@163.com
In the title complex, [Cd(C8H9N2O4)2(H2O)2]·3.5H2O, the CdII is coordinated by two water molecules and N,O-chelated by two 5-carboxy-2-propyl-1H-imidazole-4-carboxylate anions in a distorted octahedral geometry. The two imidazole rings are oriented to each other with a dihedral angle of 75.1 (2)°. Strong O—H⋯O hydrogen bonds between protonated and deprotonated carboxylate groups occur in the molecular structure. In the extensive O—H⋯O and N—H⋯O hydrogen bonds help to stabilize the three-dimensional supramolecular framework. The propyl groups of anions are disordered over two sites with refined occupancies of 0.768 (6):0.232 (6) and 0.642 (8):0.358 (8).
Related literature
For the potential uses and diverse structural types of metal complexes with the imidazole-4,5-dicarboxylate ligand, see: Zou et al. (2006); Li et al. (2006); Liu et al. (2004); Sun et al. (2005). For related structures, see: Yan et al. (2010); Li et al. (2010); Song et al. (2010); He et al. (2010); Fan et al. (2010).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536810031466/xu5001sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810031466/xu5001Isup2.hkl
A mixture of CdCl2 (0.5 mmol, 0.09 g) and 2-propyl-1H-imidazole-4,5-dicarboxylic acid (0.5 mmol, 0.99 g) in 15 ml water was sealed in an autoclave equipped with a Teflon liner (20 ml) and then heated at 433 K for 4 days. Crystals of the title compound were obtained by slow evaporation of the solvent at room temperature.
Water H atoms were located in a difference Fourier map and were allowed to ride on the parent atom, with Uiso(H) = 1.5Ueq(O). Carboxyl H atoms were located in a difference map and refined with distance restraints, Uiso(H) = 1.5Ueq(O). Other H atoms were placed at calculated positions and were treated as riding on parent atoms with C—H = 0.96 (methyl), 0.97 (methylene) and N—H = 0.86 Å, Uiso(H) = 1.2 or 1.5Ueq(C,N). The propyl groups of H3pimda are disordered over two sites with refined occupancies of 0.768 (6):0.232 (6) and 0.642 (8):0.358 (8). C—C distance restraints of disordered components were applied. The O3W water molecule is located close to an inversion center, its occupancy factor was refined to 0.49 (1) and was fixed as 0.5 at the final refinements.
Imidazole-4,5-dicarboxylic acid (H3IDC) has been widely used to coordinate with metal salts to obtain a series of MOFs with different structures and useful properties(Zou et al., 2006; Li et al., 2006; Liu et al., 2004; Sun et al., 2005), 2-propyl-1H-imidazole-4,5-carboxylate(H3pimda) ligand as one derivative of H3IDC with efficient N,O-donors has been used to obtain new metal-organic complexes by our research group, such as poly[diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato- k3 N3,O4,O5)calcium(II)] (Song et al., 2010), [diaquabis (5-carboxy-2-propyl-1H-imidazole-4-carboxylato-k2N3,O4) manganese(II)]N,N-dimethylformamide (Yan et al., 2010), [Diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato-k2 N3,O4)nickle(II)]N,N-dimethylformamide disolvate(Li et al., 2010), Diaquabis(4-carboxy-2-propyl-1H-imidazole-5-carboxylato- k2N3,O4)copper(II) N,N-dimethylformamide disolvate (He et al., 2010) and Diaquabis(5-carboxy-2-propyl-1H-imidazole- 4-carboxylato-k2N3,O4)nickle(II) tetrahedrate (Fan et al., 2010). In this paper, we report the structure of a new Cd(II) complex obtained under hydrothermal conditions.
As illustrated in figure 1, the title complex molecule is similar to diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato- κ2N,O)nickle(II) tetrahedrate (Fan et al. 2010), contains one CdII ion, two mono-deprotonated H2pimda- anions, two coordinated water molecules and 3.5 solvent water molecules. The CdII is six-coordinated by two N,O-bidentate H3pimda anions and two water molecules in a distorted octahedral geometry. the dihedral angle between the two imidazole rings is 75.0 (1) %A. In the the three-dimensional supramolecular framework is stabilized by extensive O—H···O and N—H···O hydrogen bonds involving the free water molecules, the coordinated water molecules, the carboxy O atoms and the protonated N atoms of H3pimda. The propyl groups of H3pimda are disordered over two sets of sites with refined occupiencies of 0.772 (6):0.228 (6) and 0.642 (8):0.358 (8).
For the potential uses and diverse structural types of metal complexes with the imidazole-4,5-dicarboxylate ligand, see: Zou et al. (2006); Li et al. (2006); Liu et al. (2004); Sun et al. (2005). For related structures, see: Yan et al. (2010); Li et al. (2010); Song et al.(2010); He et al. (2010); Fan et al. (2010).
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The structure of the title compound, showing the atomic-numbering scheme. Non-H atoms are shown with 30% probability displacement ellipsoids. |
[Cd(C8H9N2O4)2(H2O)2]·3.5H2O | Z = 2 |
Mr = 605.83 | F(000) = 618 |
Triclinic, P1 | Dx = 1.584 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 10.6228 (12) Å | Cell parameters from 3600 reflections |
b = 10.7000 (12) Å | θ = 1.4–25.0° |
c = 11.3694 (13) Å | µ = 0.93 mm−1 |
α = 83.690 (1)° | T = 296 K |
β = 81.701 (1)° | Block, colorless |
γ = 87.441 (1)° | 0.29 × 0.24 × 0.21 mm |
V = 1270.5 (2) Å3 |
Bruker APEXII area-detector diffractometer | 4494 independent reflections |
Radiation source: fine-focus sealed tube | 3730 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.034 |
φ and ω scan | θmax = 25.2°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | h = −12→12 |
Tmin = 0.775, Tmax = 0.829 | k = −12→8 |
6589 measured reflections | l = −13→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.107 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0505P)2 + 0.1685P] where P = (Fo2 + 2Fc2)/3 |
4494 reflections | (Δ/σ)max = 0.001 |
346 parameters | Δρmax = 0.46 e Å−3 |
7 restraints | Δρmin = −0.59 e Å−3 |
[Cd(C8H9N2O4)2(H2O)2]·3.5H2O | γ = 87.441 (1)° |
Mr = 605.83 | V = 1270.5 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 10.6228 (12) Å | Mo Kα radiation |
b = 10.7000 (12) Å | µ = 0.93 mm−1 |
c = 11.3694 (13) Å | T = 296 K |
α = 83.690 (1)° | 0.29 × 0.24 × 0.21 mm |
β = 81.701 (1)° |
Bruker APEXII area-detector diffractometer | 4494 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | 3730 reflections with I > 2σ(I) |
Tmin = 0.775, Tmax = 0.829 | Rint = 0.034 |
6589 measured reflections |
R[F2 > 2σ(F2)] = 0.041 | 7 restraints |
wR(F2) = 0.107 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.46 e Å−3 |
4494 reflections | Δρmin = −0.59 e Å−3 |
346 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cd1 | 0.84023 (3) | 0.29169 (3) | 0.19976 (2) | 0.04816 (13) | |
O1 | 0.8778 (4) | −0.1913 (3) | 0.5186 (3) | 0.0698 (9) | |
O2 | 0.8413 (3) | −0.1136 (3) | 0.6913 (3) | 0.0701 (9) | |
O3 | 0.8810 (3) | 0.0754 (3) | 0.1940 (2) | 0.0565 (7) | |
O4 | 0.8944 (3) | −0.1083 (3) | 0.3037 (3) | 0.0656 (8) | |
O5 | 0.7595 (3) | 0.5000 (3) | 0.2111 (3) | 0.0553 (7) | |
O6 | 0.5964 (3) | 0.6304 (3) | 0.1835 (3) | 0.0660 (8) | |
O7 | 0.3809 (3) | 0.6208 (3) | 0.1350 (3) | 0.0604 (8) | |
O8 | 0.2516 (3) | 0.4784 (3) | 0.0948 (3) | 0.0606 (8) | |
N1 | 0.8262 (3) | 0.2015 (3) | 0.3933 (3) | 0.0454 (7) | |
N2 | 0.8116 (3) | 0.1310 (3) | 0.5823 (3) | 0.0550 (9) | |
H2 | 0.8009 | 0.1302 | 0.6588 | 0.066* | |
N3 | 0.6294 (3) | 0.2956 (3) | 0.1734 (3) | 0.0438 (7) | |
N4 | 0.4358 (3) | 0.2862 (3) | 0.1287 (3) | 0.0479 (8) | |
H4 | 0.3681 | 0.2556 | 0.1112 | 0.058* | |
C1 | 0.8362 (3) | 0.0280 (4) | 0.5209 (3) | 0.0447 (9) | |
C2 | 0.8454 (3) | 0.0742 (3) | 0.4021 (3) | 0.0395 (8) | |
C3 | 0.8069 (5) | 0.2337 (4) | 0.5040 (4) | 0.0591 (11) | |
C4 | 0.8760 (4) | 0.0090 (4) | 0.2913 (3) | 0.0473 (9) | |
C5 | 0.8512 (4) | −0.0992 (4) | 0.5834 (4) | 0.0517 (10) | |
C6A | 0.7979 (9) | 0.3683 (10) | 0.5325 (10) | 0.085 (3) | 0.772 (6) |
H6A | 0.8215 | 0.3717 | 0.6114 | 0.102* | 0.772 (6) |
H6B | 0.8579 | 0.4174 | 0.4753 | 0.102* | 0.772 (6) |
C7A | 0.6674 (9) | 0.4249 (7) | 0.5292 (8) | 0.107 (3) | 0.772 (6) |
H7A | 0.6091 | 0.3854 | 0.5949 | 0.128* | 0.772 (6) |
H7B | 0.6379 | 0.4108 | 0.4550 | 0.128* | 0.772 (6) |
C8A | 0.6699 (11) | 0.5651 (7) | 0.5390 (9) | 0.129 (4) | 0.772 (6) |
H8A | 0.5848 | 0.5970 | 0.5604 | 0.193* | 0.772 (6) |
H8B | 0.7059 | 0.6073 | 0.4635 | 0.193* | 0.772 (6) |
H8C | 0.7207 | 0.5796 | 0.5992 | 0.193* | 0.772 (6) |
C6B | 0.740 (4) | 0.350 (4) | 0.549 (4) | 0.085 (3) | 0.228 (6) |
H6C | 0.6751 | 0.3816 | 0.5002 | 0.102* | 0.228 (6) |
H6D | 0.6998 | 0.3328 | 0.6313 | 0.102* | 0.228 (6) |
C7B | 0.844 (3) | 0.442 (3) | 0.540 (3) | 0.107 (3) | 0.228 (6) |
H7C | 0.8078 | 0.5259 | 0.5500 | 0.128* | 0.228 (6) |
H7D | 0.8951 | 0.4445 | 0.4616 | 0.128* | 0.228 (6) |
C8B | 0.924 (3) | 0.399 (3) | 0.637 (3) | 0.129 (4) | 0.228 (6) |
H8D | 0.9722 | 0.4679 | 0.6515 | 0.193* | 0.228 (6) |
H8E | 0.9808 | 0.3317 | 0.6117 | 0.193* | 0.228 (6) |
H8F | 0.8695 | 0.3699 | 0.7086 | 0.193* | 0.228 (6) |
C9 | 0.5736 (3) | 0.4138 (3) | 0.1688 (3) | 0.0397 (8) | |
C10 | 0.4529 (3) | 0.4099 (4) | 0.1405 (3) | 0.0413 (8) | |
C11 | 0.5431 (4) | 0.2209 (4) | 0.1490 (4) | 0.0509 (10) | |
C12 | 0.6485 (4) | 0.5201 (4) | 0.1898 (3) | 0.0470 (9) | |
C13 | 0.3529 (4) | 0.5090 (4) | 0.1221 (3) | 0.0481 (9) | |
C14A | 0.5509 (17) | 0.0797 (5) | 0.1655 (9) | 0.061 (3) | 0.642 (8) |
H14A | 0.6361 | 0.0508 | 0.1353 | 0.073* | 0.642 (8) |
H14B | 0.4918 | 0.0464 | 0.1201 | 0.073* | 0.642 (8) |
C15A | 0.5189 (11) | 0.0302 (8) | 0.2979 (9) | 0.081 (3) | 0.642 (8) |
H15A | 0.5740 | 0.0680 | 0.3443 | 0.098* | 0.642 (8) |
H15B | 0.4315 | 0.0537 | 0.3267 | 0.098* | 0.642 (8) |
C16A | 0.5361 (10) | −0.1097 (8) | 0.3138 (11) | 0.108 (4) | 0.642 (8) |
H16A | 0.5605 | −0.1354 | 0.3912 | 0.161* | 0.642 (8) |
H16B | 0.6013 | −0.1358 | 0.2531 | 0.161* | 0.642 (8) |
H16C | 0.4576 | −0.1479 | 0.3075 | 0.161* | 0.642 (8) |
C14B | 0.572 (3) | 0.0878 (9) | 0.119 (2) | 0.061 (3) | 0.358 (8) |
H14C | 0.6611 | 0.0664 | 0.1216 | 0.073* | 0.358 (8) |
H14D | 0.5526 | 0.0790 | 0.0400 | 0.073* | 0.358 (8) |
C15B | 0.4893 (14) | 0.0002 (15) | 0.2123 (14) | 0.081 (3) | 0.358 (8) |
H15C | 0.4005 | 0.0244 | 0.2101 | 0.098* | 0.358 (8) |
H15D | 0.5017 | −0.0851 | 0.1905 | 0.098* | 0.358 (8) |
C16B | 0.518 (3) | 0.002 (2) | 0.3363 (17) | 0.108 (4) | 0.358 (8) |
H16D | 0.4796 | −0.0688 | 0.3859 | 0.161* | 0.358 (8) |
H16E | 0.4832 | 0.0784 | 0.3669 | 0.161* | 0.358 (8) |
H16F | 0.6080 | −0.0025 | 0.3363 | 0.161* | 0.358 (8) |
O1W | 0.8927 (3) | 0.3292 (4) | 0.0015 (3) | 0.0955 (13) | |
H1W | 0.9095 | 0.2617 | −0.0314 | 0.143* | |
H2W | 0.8569 | 0.3905 | −0.0363 | 0.143* | |
O2W | 1.0419 (3) | 0.3400 (4) | 0.2218 (3) | 0.0897 (12) | |
H3W | 1.0847 | 0.4010 | 0.1869 | 0.135* | |
H4W | 1.0911 | 0.2778 | 0.2405 | 0.135* | |
O3W | 0.9149 (6) | 0.0145 (6) | 0.9607 (5) | 0.0625 (15) | 0.50 |
H5W | 0.9951 | 0.0020 | 0.9528 | 0.094* | 0.50 |
H6W | 0.9090 | 0.0145 | 1.0360 | 0.094* | 0.50 |
O4W | 0.7737 (5) | 0.1534 (4) | 0.8233 (3) | 0.1211 (17) | |
H7W | 0.8269 | 0.1083 | 0.8598 | 0.182* | |
H8W | 0.7288 | 0.2197 | 0.8353 | 0.182* | |
O5W | 0.1097 (3) | 0.2735 (3) | 0.8678 (3) | 0.0718 (9) | |
H9W | 0.1608 | 0.3312 | 0.8299 | 0.108* | |
H10W | 0.1151 | 0.2123 | 0.8255 | 0.108* | |
O6W | 0.2598 (4) | 0.1582 (4) | 0.0406 (4) | 0.1044 (13) | |
H11W | 0.2130 | 0.0949 | 0.0534 | 0.157* | |
H12W | 0.2045 | 0.2161 | 0.0283 | 0.157* | |
H1 | 0.876 (8) | −0.162 (7) | 0.449 (2) | 0.157* | |
H7 | 0.453 (3) | 0.632 (7) | 0.149 (7) | 0.157* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.04170 (18) | 0.0518 (2) | 0.0479 (2) | 0.00347 (13) | −0.00891 (12) | 0.01025 (13) |
O1 | 0.091 (2) | 0.0495 (19) | 0.067 (2) | −0.0007 (16) | −0.0173 (19) | 0.0084 (16) |
O2 | 0.070 (2) | 0.079 (2) | 0.0510 (19) | 0.0116 (17) | −0.0047 (15) | 0.0254 (15) |
O3 | 0.0718 (19) | 0.0587 (18) | 0.0362 (15) | 0.0191 (14) | −0.0077 (13) | −0.0008 (13) |
O4 | 0.096 (2) | 0.0453 (18) | 0.0579 (18) | 0.0127 (16) | −0.0199 (16) | −0.0092 (14) |
O5 | 0.0471 (16) | 0.0495 (17) | 0.0723 (19) | −0.0052 (13) | −0.0187 (14) | −0.0049 (14) |
O6 | 0.0647 (19) | 0.0398 (17) | 0.096 (2) | 0.0045 (14) | −0.0164 (17) | −0.0127 (16) |
O7 | 0.0518 (17) | 0.0510 (18) | 0.077 (2) | 0.0153 (14) | −0.0098 (15) | −0.0072 (15) |
O8 | 0.0370 (15) | 0.069 (2) | 0.071 (2) | 0.0022 (13) | −0.0108 (13) | 0.0172 (15) |
N1 | 0.0490 (18) | 0.0434 (19) | 0.0429 (18) | 0.0051 (14) | −0.0080 (14) | −0.0005 (14) |
N2 | 0.063 (2) | 0.064 (2) | 0.0355 (17) | 0.0098 (17) | −0.0058 (15) | −0.0041 (16) |
N3 | 0.0387 (17) | 0.0403 (18) | 0.0517 (19) | 0.0014 (14) | −0.0099 (14) | 0.0012 (14) |
N4 | 0.0384 (17) | 0.050 (2) | 0.055 (2) | −0.0057 (14) | −0.0133 (14) | 0.0032 (15) |
C1 | 0.038 (2) | 0.049 (2) | 0.044 (2) | 0.0000 (16) | −0.0035 (16) | 0.0043 (18) |
C2 | 0.0334 (18) | 0.044 (2) | 0.041 (2) | 0.0010 (15) | −0.0074 (15) | −0.0007 (16) |
C3 | 0.076 (3) | 0.053 (3) | 0.050 (3) | 0.009 (2) | −0.014 (2) | −0.006 (2) |
C4 | 0.047 (2) | 0.050 (2) | 0.045 (2) | 0.0074 (17) | −0.0120 (17) | −0.0020 (18) |
C5 | 0.043 (2) | 0.061 (3) | 0.047 (2) | 0.0004 (18) | −0.0083 (18) | 0.014 (2) |
C6A | 0.109 (9) | 0.068 (5) | 0.078 (5) | 0.011 (6) | −0.009 (6) | −0.021 (4) |
C7A | 0.133 (8) | 0.069 (5) | 0.115 (7) | 0.011 (5) | −0.004 (5) | −0.017 (5) |
C8A | 0.174 (10) | 0.067 (5) | 0.136 (8) | 0.020 (5) | 0.006 (7) | −0.012 (5) |
C6B | 0.109 (9) | 0.068 (5) | 0.078 (5) | 0.011 (6) | −0.009 (6) | −0.021 (4) |
C7B | 0.133 (8) | 0.069 (5) | 0.115 (7) | 0.011 (5) | −0.004 (5) | −0.017 (5) |
C8B | 0.174 (10) | 0.067 (5) | 0.136 (8) | 0.020 (5) | 0.006 (7) | −0.012 (5) |
C9 | 0.0391 (19) | 0.039 (2) | 0.0383 (19) | 0.0003 (15) | −0.0029 (15) | 0.0024 (15) |
C10 | 0.039 (2) | 0.044 (2) | 0.0378 (19) | −0.0004 (16) | 0.0002 (15) | 0.0032 (16) |
C11 | 0.048 (2) | 0.043 (2) | 0.061 (3) | −0.0025 (18) | −0.0127 (19) | 0.0029 (19) |
C12 | 0.048 (2) | 0.046 (2) | 0.047 (2) | 0.0007 (18) | −0.0077 (17) | −0.0012 (17) |
C13 | 0.041 (2) | 0.056 (3) | 0.040 (2) | 0.0088 (18) | 0.0033 (16) | 0.0075 (18) |
C14A | 0.061 (7) | 0.036 (3) | 0.087 (9) | −0.006 (3) | −0.022 (7) | 0.007 (4) |
C15A | 0.062 (5) | 0.058 (5) | 0.121 (8) | −0.003 (4) | −0.028 (5) | 0.023 (5) |
C16A | 0.101 (7) | 0.059 (5) | 0.157 (10) | −0.007 (5) | −0.023 (6) | 0.023 (6) |
C14B | 0.061 (7) | 0.036 (3) | 0.087 (9) | −0.006 (3) | −0.022 (7) | 0.007 (4) |
C15B | 0.062 (5) | 0.058 (5) | 0.121 (8) | −0.003 (4) | −0.028 (5) | 0.023 (5) |
C16B | 0.101 (7) | 0.059 (5) | 0.157 (10) | −0.007 (5) | −0.023 (6) | 0.023 (6) |
O1W | 0.085 (3) | 0.121 (3) | 0.059 (2) | 0.052 (2) | 0.0107 (18) | 0.035 (2) |
O2W | 0.0499 (19) | 0.100 (3) | 0.110 (3) | −0.0224 (18) | −0.0251 (18) | 0.057 (2) |
O3W | 0.065 (4) | 0.075 (4) | 0.048 (3) | 0.008 (3) | −0.007 (3) | −0.013 (3) |
O4W | 0.156 (4) | 0.142 (4) | 0.072 (2) | 0.058 (3) | −0.030 (3) | −0.048 (3) |
O5W | 0.0623 (19) | 0.069 (2) | 0.084 (2) | −0.0175 (16) | 0.0083 (16) | −0.0255 (17) |
O6W | 0.101 (3) | 0.098 (3) | 0.131 (4) | −0.001 (2) | −0.064 (3) | −0.025 (3) |
Cd1—O1W | 2.238 (3) | C6B—H6D | 0.9700 |
Cd1—O2W | 2.281 (3) | C7B—C8B | 1.512 (14) |
Cd1—N1 | 2.290 (3) | C7B—H7C | 0.9700 |
Cd1—N3 | 2.300 (3) | C7B—H7D | 0.9700 |
Cd1—O3 | 2.341 (3) | C8B—H8D | 0.9600 |
Cd1—O5 | 2.362 (3) | C8B—H8E | 0.9600 |
O1—C5 | 1.291 (5) | C8B—H8F | 0.9600 |
O1—H1 | 0.82 (3) | C9—C10 | 1.370 (5) |
O2—C5 | 1.209 (5) | C9—C12 | 1.476 (5) |
O3—C4 | 1.243 (5) | C10—C13 | 1.487 (5) |
O4—C4 | 1.257 (5) | C11—C14A | 1.502 (7) |
O5—C12 | 1.243 (5) | C11—C14B | 1.507 (9) |
O6—C12 | 1.280 (5) | C14A—C15A | 1.534 (12) |
O7—C13 | 1.275 (5) | C14A—H14A | 0.9700 |
O7—H7 | 0.82 (4) | C14A—H14B | 0.9700 |
O8—C13 | 1.229 (5) | C15A—C16A | 1.495 (10) |
N1—C3 | 1.327 (5) | C15A—H15A | 0.9700 |
N1—C2 | 1.363 (5) | C15A—H15B | 0.9700 |
N2—C3 | 1.341 (5) | C16A—H16A | 0.9600 |
N2—C1 | 1.364 (5) | C16A—H16B | 0.9600 |
N2—H2 | 0.8600 | C16A—H16C | 0.9600 |
N3—C11 | 1.320 (5) | C14B—C15B | 1.532 (14) |
N3—C9 | 1.371 (5) | C14B—H14C | 0.9700 |
N4—C11 | 1.346 (5) | C14B—H14D | 0.9700 |
N4—C10 | 1.368 (5) | C15B—C16B | 1.486 (13) |
N4—H4 | 0.8600 | C15B—H15C | 0.9700 |
C1—C2 | 1.377 (5) | C15B—H15D | 0.9700 |
C1—C5 | 1.478 (6) | C16B—H16D | 0.9600 |
C2—C4 | 1.495 (5) | C16B—H16E | 0.9600 |
C3—C6A | 1.506 (11) | C16B—H16F | 0.9600 |
C3—C6B | 1.51 (4) | O1W—H1W | 0.8499 |
C6A—C7A | 1.492 (12) | O1W—H2W | 0.8500 |
C6A—H6A | 0.9700 | O2W—H3W | 0.8405 |
C6A—H6B | 0.9700 | O2W—H4W | 0.8547 |
C7A—C8A | 1.518 (10) | O3W—H5W | 0.8500 |
C7A—H7A | 0.9700 | O3W—H6W | 0.8501 |
C7A—H7B | 0.9700 | O4W—H7W | 0.8503 |
C8A—H8A | 0.9600 | O4W—H8W | 0.8498 |
C8A—H8B | 0.9600 | O5W—H9W | 0.8741 |
C8A—H8C | 0.9600 | O5W—H10W | 0.8500 |
C6B—C7B | 1.498 (15) | O6W—H11W | 0.8452 |
C6B—H6C | 0.9700 | O6W—H12W | 0.8490 |
O1W—Cd1—O2W | 88.94 (14) | C8B—C7B—H7C | 110.3 |
O1W—Cd1—N1 | 162.70 (12) | C6B—C7B—H7D | 110.3 |
O2W—Cd1—N1 | 85.50 (12) | C8B—C7B—H7D | 110.3 |
O1W—Cd1—N3 | 89.03 (13) | H7C—C7B—H7D | 108.5 |
O2W—Cd1—N3 | 165.95 (12) | C7B—C8B—H8D | 109.5 |
N1—Cd1—N3 | 100.21 (11) | C7B—C8B—H8E | 109.5 |
O1W—Cd1—O3 | 91.83 (12) | H8D—C8B—H8E | 109.5 |
O2W—Cd1—O3 | 96.11 (12) | C7B—C8B—H8F | 109.5 |
N1—Cd1—O3 | 72.55 (10) | H8D—C8B—H8F | 109.5 |
N3—Cd1—O3 | 97.85 (10) | H8E—C8B—H8F | 109.5 |
O1W—Cd1—O5 | 90.99 (12) | C10—C9—N3 | 110.1 (3) |
O2W—Cd1—O5 | 94.05 (12) | C10—C9—C12 | 131.2 (3) |
N1—Cd1—O5 | 105.72 (10) | N3—C9—C12 | 118.6 (3) |
N3—Cd1—O5 | 72.08 (10) | N4—C10—C9 | 105.1 (3) |
O3—Cd1—O5 | 169.50 (10) | N4—C10—C13 | 122.2 (3) |
C5—O1—H1 | 107 (6) | C9—C10—C13 | 132.6 (4) |
C4—O3—Cd1 | 117.3 (2) | N3—C11—N4 | 111.0 (3) |
C12—O5—Cd1 | 115.9 (2) | N3—C11—C14A | 125.1 (8) |
C13—O7—H7 | 118 (6) | N4—C11—C14A | 122.8 (8) |
C3—N1—C2 | 106.7 (3) | N3—C11—C14B | 123.8 (15) |
C3—N1—Cd1 | 140.1 (3) | N4—C11—C14B | 123.8 (16) |
C2—N1—Cd1 | 113.2 (2) | O5—C12—O6 | 122.5 (4) |
C3—N2—C1 | 108.9 (3) | O5—C12—C9 | 119.3 (3) |
C3—N2—H2 | 125.6 | O6—C12—C9 | 118.2 (4) |
C1—N2—H2 | 125.6 | O8—C13—O7 | 125.1 (4) |
C11—N3—C9 | 105.6 (3) | O8—C13—C10 | 118.7 (4) |
C11—N3—Cd1 | 140.3 (3) | O7—C13—C10 | 116.2 (4) |
C9—N3—Cd1 | 113.7 (2) | C11—C14A—C15A | 110.9 (6) |
C11—N4—C10 | 108.1 (3) | C11—C14A—H14A | 109.5 |
C11—N4—H4 | 125.9 | C15A—C14A—H14A | 109.5 |
C10—N4—H4 | 125.9 | C11—C14A—H14B | 109.5 |
N2—C1—C2 | 105.1 (3) | C15A—C14A—H14B | 109.5 |
N2—C1—C5 | 121.4 (4) | H14A—C14A—H14B | 108.0 |
C2—C1—C5 | 133.4 (4) | C16A—C15A—C14A | 110.3 (8) |
N1—C2—C1 | 109.3 (3) | C16A—C15A—H15A | 109.6 |
N1—C2—C4 | 119.8 (3) | C14A—C15A—H15A | 109.6 |
C1—C2—C4 | 130.8 (4) | C16A—C15A—H15B | 109.6 |
N1—C3—N2 | 110.0 (4) | C14A—C15A—H15B | 109.6 |
N1—C3—C6A | 123.2 (6) | H15A—C15A—H15B | 108.1 |
N2—C3—C6A | 126.4 (6) | C11—C14B—C15B | 108.1 (13) |
N1—C3—C6B | 129 (2) | C11—C14B—H14C | 110.1 |
N2—C3—C6B | 117.6 (18) | C15B—C14B—H14C | 110.1 |
O3—C4—O4 | 125.2 (4) | C11—C14B—H14D | 110.1 |
O3—C4—C2 | 117.2 (4) | C15B—C14B—H14D | 110.1 |
O4—C4—C2 | 117.6 (3) | H14C—C14B—H14D | 108.4 |
O2—C5—O1 | 122.4 (4) | C16B—C15B—C14B | 113.8 (19) |
O2—C5—C1 | 119.9 (4) | C16B—C15B—H15C | 108.8 |
O1—C5—C1 | 117.6 (4) | C14B—C15B—H15C | 108.8 |
C7A—C6A—C3 | 112.3 (8) | C16B—C15B—H15D | 108.8 |
C7A—C6A—H6A | 109.2 | C14B—C15B—H15D | 108.8 |
C3—C6A—H6A | 109.2 | H15C—C15B—H15D | 107.7 |
C7A—C6A—H6B | 109.2 | C15B—C16B—H16D | 109.5 |
C3—C6A—H6B | 109.2 | C15B—C16B—H16E | 109.5 |
H6A—C6A—H6B | 107.9 | H16D—C16B—H16E | 109.5 |
C6A—C7A—C8A | 109.4 (8) | C15B—C16B—H16F | 109.5 |
C6A—C7A—H7A | 109.8 | H16D—C16B—H16F | 109.5 |
C8A—C7A—H7A | 109.8 | H16E—C16B—H16F | 109.5 |
C6A—C7A—H7B | 109.8 | Cd1—O1W—H1W | 112.0 |
C8A—C7A—H7B | 109.8 | Cd1—O1W—H2W | 119.5 |
H7A—C7A—H7B | 108.2 | H1W—O1W—H2W | 118.7 |
C7B—C6B—C3 | 104 (3) | Cd1—O2W—H3W | 127.7 |
C7B—C6B—H6C | 111.0 | Cd1—O2W—H4W | 116.0 |
C3—C6B—H6C | 111.0 | H3W—O2W—H4W | 110.5 |
C7B—C6B—H6D | 111.0 | H5W—O3W—H6W | 92.8 |
C3—C6B—H6D | 111.0 | H7W—O4W—H8W | 136.0 |
H6C—C6B—H6D | 109.0 | H9W—O5W—H10W | 107.5 |
C6B—C7B—C8B | 107 (3) | H11W—O6W—H12W | 100.2 |
C6B—C7B—H7C | 110.3 |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O4W | 0.86 | 1.89 | 2.747 (5) | 172 |
N4—H4···O6W | 0.86 | 1.90 | 2.729 (5) | 161 |
O1—H1···O4 | 0.82 (3) | 1.67 (3) | 2.490 (5) | 172 (7) |
O7—H7···O6 | 0.82 (4) | 1.63 (4) | 2.440 (5) | 171 (8) |
O1W—H1W···O5Wi | 0.85 | 2.27 | 2.654 (5) | 108 |
O1W—H2W···O8ii | 0.85 | 1.90 | 2.737 (5) | 168 |
O2W—H3W···O8iii | 0.84 | 2.08 | 2.852 (5) | 152 |
O2W—H4W···O2iv | 0.86 | 1.99 | 2.818 (5) | 163 |
O3W—H5W···O3iv | 0.85 | 2.19 | 2.794 (7) | 128 |
O3W—H6W···O3v | 0.85 | 1.96 | 2.770 (6) | 160 |
O4W—H7W···O3W | 0.85 | 1.78 | 2.620 (8) | 169 |
O4W—H8W···O7vi | 0.85 | 2.05 | 2.904 (6) | 180 |
O5W—H9W···O5vi | 0.87 | 2.01 | 2.841 (5) | 159 |
O5W—H10W···O4vii | 0.85 | 1.95 | 2.778 (5) | 163 |
O6W—H11W···O3Wvii | 0.85 | 1.87 | 2.679 (8) | 160 |
O6W—H12W···O5Wviii | 0.85 | 2.22 | 2.850 (5) | 130 |
Symmetry codes: (i) x+1, y, z−1; (ii) −x+1, −y+1, −z; (iii) x+1, y, z; (iv) −x+2, −y, −z+1; (v) x, y, z+1; (vi) −x+1, −y+1, −z+1; (vii) −x+1, −y, −z+1; (viii) x, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | [Cd(C8H9N2O4)2(H2O)2]·3.5H2O |
Mr | 605.83 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 10.6228 (12), 10.7000 (12), 11.3694 (13) |
α, β, γ (°) | 83.690 (1), 81.701 (1), 87.441 (1) |
V (Å3) | 1270.5 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.93 |
Crystal size (mm) | 0.29 × 0.24 × 0.21 |
Data collection | |
Diffractometer | Bruker APEXII area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2004) |
Tmin, Tmax | 0.775, 0.829 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6589, 4494, 3730 |
Rint | 0.034 |
(sin θ/λ)max (Å−1) | 0.599 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.041, 0.107, 1.05 |
No. of reflections | 4494 |
No. of parameters | 346 |
No. of restraints | 7 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.46, −0.59 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O4W | 0.86 | 1.89 | 2.747 (5) | 172 |
N4—H4···O6W | 0.86 | 1.90 | 2.729 (5) | 161 |
O1—H1···O4 | 0.82 (3) | 1.67 (3) | 2.490 (5) | 172 (7) |
O7—H7···O6 | 0.82 (4) | 1.63 (4) | 2.440 (5) | 171 (8) |
O1W—H1W···O5Wi | 0.85 | 2.27 | 2.654 (5) | 108 |
O1W—H2W···O8ii | 0.85 | 1.90 | 2.737 (5) | 168 |
O2W—H3W···O8iii | 0.84 | 2.08 | 2.852 (5) | 152 |
O2W—H4W···O2iv | 0.86 | 1.99 | 2.818 (5) | 163 |
O3W—H5W···O3iv | 0.85 | 2.19 | 2.794 (7) | 128 |
O3W—H6W···O3v | 0.85 | 1.96 | 2.770 (6) | 160 |
O4W—H7W···O3W | 0.85 | 1.78 | 2.620 (8) | 169 |
O4W—H8W···O7vi | 0.85 | 2.05 | 2.904 (6) | 180 |
O5W—H9W···O5vi | 0.87 | 2.01 | 2.841 (5) | 159 |
O5W—H10W···O4vii | 0.85 | 1.95 | 2.778 (5) | 163 |
O6W—H11W···O3Wvii | 0.85 | 1.87 | 2.679 (8) | 160 |
O6W—H12W···O5Wviii | 0.85 | 2.22 | 2.850 (5) | 130 |
Symmetry codes: (i) x+1, y, z−1; (ii) −x+1, −y+1, −z; (iii) x+1, y, z; (iv) −x+2, −y, −z+1; (v) x, y, z+1; (vi) −x+1, −y+1, −z+1; (vii) −x+1, −y, −z+1; (viii) x, y, z−1. |
Acknowledgements
This work was supported by the Nonprofit Industry Foundation of the National Ocean Administration of China (grant No. 2000905021), Guangdong Oceanic Fisheries Technology Promotion Project [grant No. A2009003-018(c)] and Guangdong Chinese Academy of Science Comprehensive Strategic Cooperation Project (grant No. 2009B091300121).
References
Bruker (2004). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Fan, R.-Z., Li, S.-J., Song, W.-D., Miao, D.-L. & Hu, S.-W. (2010). Acta Cryst. E66, m897–m898. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
He, L.-Z., Li, S.-J., Song, W.-D. & Miao, D.-L. (2010). Acta Cryst. E66, m896. Web of Science CrossRef IUCr Journals Google Scholar
Li, C.-J., Hu, S., Li, W., Lam, C. K., Zheng, Y.-Z. & Tong, M.-L. (2006). Eur. J. Inorg. Chem. pp. 1931–1935. Web of Science CSD CrossRef Google Scholar
Li, S.-J., Yan, J.-B., Song, W.-D., Wang, H. & Miao, D.-L. (2010). Acta Cryst. E66, m280. Web of Science CSD CrossRef IUCr Journals Google Scholar
Liu, Y.-L., Kravtsov, V., Walsh, R. D., Poddar, P., Srikanth, H. & Eddaoudi, M. (2004). Chem. Commun. pp. 2806–2807. Web of Science CSD CrossRef Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Song, W.-D., Yan, J.-B., Li, S.-J., Miao, D.-L. & Li, X.-F. (2010). Acta Cryst. E66, m53. Web of Science CSD CrossRef IUCr Journals Google Scholar
Sun, Y.-Q., Zhang, J., Chen, Y.-M. & Yang, G.-Y. (2005). Angew. Chem. Int. Ed. 44, 5814–5817. Web of Science CSD CrossRef CAS Google Scholar
Yan, J.-B., Li, S.-J., Song, W.-D., Wang, H. & Miao, D.-L. (2010). Acta Cryst. E66, m99. Web of Science CSD CrossRef IUCr Journals Google Scholar
Zou, R.-Q., Sakurai, H. & Xu, Q. (2006). Angew. Chem. Int. Ed. 45, 2542–2546. Web of Science CSD CrossRef CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Imidazole-4,5-dicarboxylic acid (H3IDC) has been widely used to coordinate with metal salts to obtain a series of MOFs with different structures and useful properties(Zou et al., 2006; Li et al., 2006; Liu et al., 2004; Sun et al., 2005), 2-propyl-1H-imidazole-4,5-carboxylate(H3pimda) ligand as one derivative of H3IDC with efficient N,O-donors has been used to obtain new metal-organic complexes by our research group, such as poly[diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato- k3 N3,O4,O5)calcium(II)] (Song et al., 2010), [diaquabis (5-carboxy-2-propyl-1H-imidazole-4-carboxylato-k2N3,O4) manganese(II)]N,N-dimethylformamide (Yan et al., 2010), [Diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato-k2 N3,O4)nickle(II)]N,N-dimethylformamide disolvate(Li et al., 2010), Diaquabis(4-carboxy-2-propyl-1H-imidazole-5-carboxylato- k2N3,O4)copper(II) N,N-dimethylformamide disolvate (He et al., 2010) and Diaquabis(5-carboxy-2-propyl-1H-imidazole- 4-carboxylato-k2N3,O4)nickle(II) tetrahedrate (Fan et al., 2010). In this paper, we report the structure of a new Cd(II) complex obtained under hydrothermal conditions.
As illustrated in figure 1, the title complex molecule is similar to diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato- κ2N,O)nickle(II) tetrahedrate (Fan et al. 2010), contains one CdII ion, two mono-deprotonated H2pimda- anions, two coordinated water molecules and 3.5 solvent water molecules. The CdII is six-coordinated by two N,O-bidentate H3pimda anions and two water molecules in a distorted octahedral geometry. the dihedral angle between the two imidazole rings is 75.0 (1) %A. In the crystal structure, the three-dimensional supramolecular framework is stabilized by extensive O—H···O and N—H···O hydrogen bonds involving the free water molecules, the coordinated water molecules, the carboxy O atoms and the protonated N atoms of H3pimda. The propyl groups of H3pimda are disordered over two sets of sites with refined occupiencies of 0.772 (6):0.228 (6) and 0.642 (8):0.358 (8).