metal-organic compounds
Bis(pyridine-2-carbaldehyde thiosemicarbazone)zinc(II) dinitrate dihydrate
aDepartment of Chemistry and Chemical Engineering, Southeast University, Nanjing 211189, People's Republic of China
*Correspondence e-mail: cep02chl@yahoo.com.cn
The 7H8N4S)2](NO3)2·2H2O, contains two Zn(pht)2 cations (pht is pyridine-2-carbaldehyde thiosemicarbazone), four nitrate anions and four water molecules. In the cations, each ZnII ion adopts a distorted octahedral coordination geometry, being chelated by two tridentate pht ligands. In the crystal, the cations, anions and water molecules are connected via O—H⋯O and N—H⋯O hydrogen bonds into a three-dimensional network.
of the title compound, [Zn(CExperimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2000); cell SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008b); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008b); molecular graphics: ORTEPIII (Burnett & Johnson, 1996) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536810038614/bt5358sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810038614/bt5358Isup2.hkl
A mixture of pht (0.036 g, 0.2 mmol), Zn(NO3)2.6H2O (0.029 g, 0.1 mmol), and water (8 ml) were heated ina 15 ml Teflon-lined vessel at 120 ° for 3 days, followed by slow cooling (5 ° h-1) to room temperature. After filtration, colorless block crystals were collected and dried in air (0.018 g, yield ca 30.7% based on pht).
All H atoms attached to C and N atoms were fixed geometrically and treated as riding with C—H = 0.93 Å and N—H = 0.86 Å with Uiso(H) = 1.2 Ueq(C or N). H atoms of water molecules were located in difference Fourier maps and included in the subsequent
with O—H= 0.85Å with Uiso(H) = 1.2 Ueq(O).Data collection: SMART (Bruker, 2000); cell
SAINT (Bruker, 2000); data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXTL (Sheldrick, 2008b); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008b); molecular graphics: ORTEPIII (Burnett & Johnson, 1996) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008b).Fig. 1. View of the asymmetric unit of the title compoundcompound with the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level. H atoms are represented as small spheres of arbitrary radii. |
[Zn(C7H8N4S)2](NO3)2·2H2O | F(000) = 2400 |
Mr = 585.89 | Dx = 1.685 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 785 reflections |
a = 21.4623 (14) Å | θ = 2.4–28.0° |
b = 16.6324 (12) Å | µ = 1.31 mm−1 |
c = 13.2764 (10) Å | T = 120 K |
β = 102.876 (2)° | Block, colorless |
V = 4620.1 (6) Å3 | 0.25 × 0.22 × 0.20 mm |
Z = 8 |
Bruker SMART APEX CCD diffractometer | 8732 independent reflections |
Radiation source: fine-focus sealed tube | 5113 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.077 |
ϕ and ω scan | θmax = 26.0°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a) | h = −25→21 |
Tmin = 0.736, Tmax = 0.780 | k = −20→12 |
22904 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.057 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.123 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0354P)2] where P = (Fo2 + 2Fc2)/3 |
8732 reflections | (Δ/σ)max = 0.029 |
631 parameters | Δρmax = 0.81 e Å−3 |
0 restraints | Δρmin = −0.43 e Å−3 |
[Zn(C7H8N4S)2](NO3)2·2H2O | V = 4620.1 (6) Å3 |
Mr = 585.89 | Z = 8 |
Monoclinic, P21/c | Mo Kα radiation |
a = 21.4623 (14) Å | µ = 1.31 mm−1 |
b = 16.6324 (12) Å | T = 120 K |
c = 13.2764 (10) Å | 0.25 × 0.22 × 0.20 mm |
β = 102.876 (2)° |
Bruker SMART APEX CCD diffractometer | 8732 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a) | 5113 reflections with I > 2σ(I) |
Tmin = 0.736, Tmax = 0.780 | Rint = 0.077 |
22904 measured reflections |
R[F2 > 2σ(F2)] = 0.057 | 0 restraints |
wR(F2) = 0.123 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.81 e Å−3 |
8732 reflections | Δρmin = −0.43 e Å−3 |
631 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.25244 (3) | 0.23919 (3) | 0.57658 (4) | 0.02381 (17) | |
Zn2 | 0.22452 (3) | 0.75501 (3) | 0.82766 (4) | 0.02208 (17) | |
S1 | 0.18156 (7) | 0.30117 (8) | 0.42437 (10) | 0.0301 (4) | |
S2 | 0.32904 (7) | 0.17217 (8) | 0.48824 (11) | 0.0330 (4) | |
S3 | 0.14317 (7) | 0.65650 (8) | 0.85347 (10) | 0.0280 (3) | |
S4 | 0.30520 (7) | 0.65526 (8) | 0.80976 (10) | 0.0280 (4) | |
C1 | 0.3251 (3) | 0.1529 (3) | 0.7846 (4) | 0.0339 (15) | |
H1A | 0.3582 | 0.1887 | 0.7831 | 0.041* | |
C2 | 0.3318 (3) | 0.0998 (3) | 0.8668 (4) | 0.0378 (16) | |
H2A | 0.3684 | 0.1004 | 0.9195 | 0.045* | |
C3 | 0.2829 (3) | 0.0460 (3) | 0.8692 (4) | 0.0386 (16) | |
H3A | 0.2863 | 0.0094 | 0.9231 | 0.046* | |
C4 | 0.2294 (3) | 0.0477 (3) | 0.7902 (4) | 0.0332 (15) | |
H4A | 0.1959 | 0.0123 | 0.7900 | 0.040* | |
C5 | 0.2258 (3) | 0.1028 (3) | 0.7106 (4) | 0.0266 (13) | |
C6 | 0.1702 (3) | 0.1088 (3) | 0.6264 (4) | 0.0277 (13) | |
H6A | 0.1362 | 0.0731 | 0.6202 | 0.033* | |
C8 | 0.1178 (2) | 0.2397 (3) | 0.4168 (4) | 0.0223 (12) | |
C9 | 0.1696 (3) | 0.3390 (3) | 0.7026 (4) | 0.0270 (13) | |
H9A | 0.1368 | 0.3033 | 0.6752 | 0.032* | |
C10 | 0.1577 (3) | 0.4020 (3) | 0.7660 (4) | 0.0285 (14) | |
H10A | 0.1173 | 0.4086 | 0.7797 | 0.034* | |
C11 | 0.2065 (3) | 0.4540 (3) | 0.8076 (4) | 0.0330 (15) | |
H11A | 0.1996 | 0.4961 | 0.8499 | 0.040* | |
C12 | 0.2655 (3) | 0.4431 (3) | 0.7859 (4) | 0.0298 (14) | |
H12A | 0.2992 | 0.4773 | 0.8137 | 0.036* | |
C13 | 0.2735 (3) | 0.3807 (3) | 0.7222 (3) | 0.0200 (12) | |
C14 | 0.3341 (3) | 0.3668 (3) | 0.6934 (4) | 0.0256 (13) | |
H14A | 0.3701 | 0.3973 | 0.7214 | 0.031* | |
C16 | 0.3920 (3) | 0.2337 (3) | 0.5309 (4) | 0.0288 (13) | |
C17 | 0.3197 (3) | 0.8776 (3) | 0.7546 (4) | 0.0286 (14) | |
H17A | 0.3479 | 0.8639 | 0.8161 | 0.034* | |
C18 | 0.3399 (3) | 0.9322 (3) | 0.6897 (4) | 0.0300 (14) | |
H18A | 0.3812 | 0.9530 | 0.7059 | 0.036* | |
C19 | 0.2978 (3) | 0.9545 (3) | 0.6017 (4) | 0.0334 (15) | |
H19A | 0.3097 | 0.9922 | 0.5577 | 0.040* | |
C20 | 0.2369 (3) | 0.9208 (3) | 0.5776 (4) | 0.0291 (14) | |
H20A | 0.2073 | 0.9359 | 0.5182 | 0.035* | |
C21 | 0.2214 (2) | 0.8643 (3) | 0.6445 (4) | 0.0207 (12) | |
C22 | 0.1609 (3) | 0.8202 (3) | 0.6203 (4) | 0.0256 (13) | |
H22A | 0.1292 | 0.8320 | 0.5621 | 0.031* | |
C24 | 0.0965 (3) | 0.6578 (3) | 0.7329 (4) | 0.0232 (13) | |
C25 | 0.1337 (3) | 0.8917 (3) | 0.8776 (4) | 0.0278 (13) | |
H25A | 0.1075 | 0.8782 | 0.8141 | 0.033* | |
C26 | 0.1147 (3) | 0.9538 (3) | 0.9340 (4) | 0.0285 (14) | |
H26A | 0.0771 | 0.9819 | 0.9077 | 0.034* | |
C27 | 0.1520 (3) | 0.9729 (3) | 1.0289 (4) | 0.0320 (14) | |
H27A | 0.1398 | 1.0135 | 1.0686 | 0.038* | |
C28 | 0.2086 (3) | 0.9305 (3) | 1.0648 (4) | 0.0320 (14) | |
H28A | 0.2350 | 0.9427 | 1.1286 | 0.038* | |
C29 | 0.2246 (3) | 0.8702 (3) | 1.0038 (4) | 0.0235 (13) | |
C30 | 0.2841 (3) | 0.8244 (3) | 1.0344 (4) | 0.0258 (13) | |
H30A | 0.3132 | 0.8343 | 1.0963 | 0.031* | |
C32 | 0.3575 (3) | 0.6699 (3) | 0.9239 (4) | 0.0242 (13) | |
N1 | 0.2738 (2) | 0.1546 (2) | 0.7083 (3) | 0.0270 (11) | |
N2 | 0.1698 (2) | 0.1650 (2) | 0.5611 (3) | 0.0234 (10) | |
N3 | 0.1180 (2) | 0.1775 (2) | 0.4824 (3) | 0.0273 (11) | |
H3B | 0.0855 | 0.1460 | 0.4745 | 0.033* | |
N4 | 0.06559 (19) | 0.2474 (2) | 0.3439 (3) | 0.0275 (11) | |
H4B | 0.0346 | 0.2140 | 0.3405 | 0.033* | |
H4C | 0.0624 | 0.2858 | 0.2997 | 0.033* | |
N5 | 0.2263 (2) | 0.3291 (2) | 0.6810 (3) | 0.0225 (10) | |
N6 | 0.3358 (2) | 0.3111 (2) | 0.6284 (3) | 0.0243 (11) | |
N7 | 0.3911 (2) | 0.2952 (2) | 0.5973 (3) | 0.0287 (11) | |
H7A | 0.4247 | 0.3239 | 0.6195 | 0.034* | |
N8 | 0.4457 (2) | 0.2266 (3) | 0.4975 (4) | 0.0427 (13) | |
H8A | 0.4766 | 0.2598 | 0.5183 | 0.051* | |
H8B | 0.4495 | 0.1888 | 0.4552 | 0.051* | |
N9 | 0.2622 (2) | 0.8438 (2) | 0.7334 (3) | 0.0231 (10) | |
N10 | 0.15389 (19) | 0.7643 (2) | 0.6836 (3) | 0.0195 (10) | |
N11 | 0.1020 (2) | 0.7152 (2) | 0.6629 (3) | 0.0244 (11) | |
H11B | 0.0732 | 0.7204 | 0.6067 | 0.029* | |
N12 | 0.0521 (2) | 0.6028 (2) | 0.7020 (3) | 0.0316 (12) | |
H12B | 0.0286 | 0.6047 | 0.6404 | 0.038* | |
H12C | 0.0466 | 0.5650 | 0.7433 | 0.038* | |
N13 | 0.1877 (2) | 0.8507 (2) | 0.9102 (3) | 0.0229 (10) | |
N14 | 0.2938 (2) | 0.7703 (2) | 0.9722 (3) | 0.0212 (10) | |
N15 | 0.3479 (2) | 0.7262 (2) | 0.9943 (3) | 0.0256 (11) | |
H15A | 0.3757 | 0.7333 | 1.0511 | 0.031* | |
N16 | 0.4098 (2) | 0.6278 (2) | 0.9496 (3) | 0.0328 (12) | |
H16A | 0.4360 | 0.6362 | 1.0079 | 0.039* | |
H16B | 0.4182 | 0.5916 | 0.9083 | 0.039* | |
N17 | 0.5277 (3) | 0.4141 (3) | 0.5916 (4) | 0.0421 (13) | |
N18 | 0.5183 (2) | 0.9676 (3) | 0.6417 (3) | 0.0291 (11) | |
N19 | −0.0127 (3) | 0.0485 (3) | 0.3698 (4) | 0.0358 (12) | |
N20 | −0.0031 (2) | 0.6531 (3) | 0.4316 (4) | 0.0358 (12) | |
O1 | 0.4955 (2) | 0.4005 (3) | 0.6560 (3) | 0.0628 (14) | |
O2 | 0.5329 (2) | 0.3626 (3) | 0.5256 (4) | 0.0677 (15) | |
O3 | 0.5557 (2) | 0.4799 (3) | 0.5909 (3) | 0.0544 (13) | |
O4 | 0.57090 (17) | 0.9985 (2) | 0.6837 (3) | 0.0329 (10) | |
O5 | 0.46998 (18) | 1.0110 (2) | 0.6105 (3) | 0.0406 (11) | |
O6 | 0.51370 (17) | 0.8926 (2) | 0.6304 (3) | 0.0335 (10) | |
O7 | −0.01433 (19) | 0.1186 (2) | 0.4029 (3) | 0.0448 (11) | |
O8 | 0.0395 (2) | 0.0142 (3) | 0.3794 (3) | 0.0516 (12) | |
O9 | −0.0623 (2) | 0.0145 (3) | 0.3268 (3) | 0.0648 (15) | |
O10 | 0.02421 (18) | 0.7177 (2) | 0.4717 (3) | 0.0395 (11) | |
O11 | −0.01805 (19) | 0.6012 (2) | 0.4904 (3) | 0.0430 (11) | |
O12 | −0.01414 (18) | 0.6431 (2) | 0.3370 (3) | 0.0441 (11) | |
O1W | 0.62343 (19) | 0.4712 (3) | 0.4129 (3) | 0.0608 (13) | |
H1WA | 0.6112 | 0.4562 | 0.3504 | 0.073* | |
H1WB | 0.6057 | 0.4444 | 0.4533 | 0.073* | |
O2W | 0.52013 (19) | 0.6250 (3) | 0.7187 (3) | 0.0588 (13) | |
H2WA | 0.5064 | 0.6175 | 0.7733 | 0.071* | |
H2WB | 0.5496 | 0.5995 | 0.6990 | 0.071* | |
O3W | 0.04209 (17) | 0.3374 (2) | 0.1575 (3) | 0.0400 (10) | |
H3WA | 0.0152 | 0.3325 | 0.1001 | 0.048* | |
H3WB | 0.0337 | 0.3847 | 0.1746 | 0.048* | |
O4W | 0.43806 (18) | 0.7533 (2) | 0.6735 (3) | 0.0542 (12) | |
H4WA | 0.4679 | 0.7266 | 0.6564 | 0.065* | |
H4WB | 0.4545 | 0.7897 | 0.7161 | 0.065* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.0256 (4) | 0.0197 (3) | 0.0261 (3) | −0.0050 (3) | 0.0059 (3) | −0.0023 (3) |
Zn2 | 0.0243 (4) | 0.0183 (3) | 0.0222 (3) | 0.0012 (3) | 0.0023 (3) | −0.0007 (3) |
S1 | 0.0311 (10) | 0.0296 (8) | 0.0283 (7) | −0.0100 (7) | 0.0039 (7) | 0.0025 (6) |
S2 | 0.0338 (10) | 0.0279 (8) | 0.0388 (8) | −0.0050 (7) | 0.0116 (7) | −0.0111 (6) |
S3 | 0.0340 (10) | 0.0228 (7) | 0.0260 (7) | −0.0015 (7) | 0.0038 (6) | 0.0007 (6) |
S4 | 0.0302 (9) | 0.0229 (7) | 0.0279 (7) | 0.0048 (7) | 0.0005 (6) | −0.0041 (6) |
C1 | 0.040 (4) | 0.024 (3) | 0.034 (3) | −0.002 (3) | 0.001 (3) | −0.003 (3) |
C2 | 0.059 (5) | 0.025 (3) | 0.028 (3) | 0.016 (3) | 0.006 (3) | −0.005 (3) |
C3 | 0.065 (5) | 0.021 (3) | 0.036 (3) | 0.007 (3) | 0.025 (3) | 0.004 (3) |
C4 | 0.045 (4) | 0.021 (3) | 0.038 (3) | 0.008 (3) | 0.019 (3) | 0.003 (3) |
C5 | 0.035 (4) | 0.017 (3) | 0.034 (3) | 0.004 (3) | 0.019 (3) | 0.001 (2) |
C6 | 0.029 (4) | 0.015 (3) | 0.043 (3) | −0.005 (3) | 0.015 (3) | −0.001 (3) |
C8 | 0.023 (3) | 0.020 (3) | 0.025 (3) | 0.002 (3) | 0.008 (2) | −0.006 (2) |
C9 | 0.038 (4) | 0.018 (3) | 0.025 (3) | −0.004 (3) | 0.008 (3) | 0.004 (2) |
C10 | 0.032 (4) | 0.031 (3) | 0.026 (3) | 0.010 (3) | 0.012 (3) | 0.012 (2) |
C11 | 0.055 (5) | 0.018 (3) | 0.025 (3) | 0.007 (3) | 0.005 (3) | 0.000 (2) |
C12 | 0.041 (4) | 0.019 (3) | 0.028 (3) | −0.002 (3) | 0.004 (3) | −0.003 (2) |
C13 | 0.023 (4) | 0.019 (3) | 0.017 (3) | 0.002 (3) | 0.004 (2) | 0.003 (2) |
C14 | 0.030 (4) | 0.021 (3) | 0.023 (3) | −0.005 (3) | 0.001 (3) | 0.002 (2) |
C16 | 0.029 (4) | 0.024 (3) | 0.034 (3) | 0.002 (3) | 0.009 (3) | −0.001 (2) |
C17 | 0.027 (4) | 0.022 (3) | 0.035 (3) | 0.005 (3) | 0.004 (3) | −0.005 (3) |
C18 | 0.025 (4) | 0.023 (3) | 0.044 (3) | −0.003 (3) | 0.012 (3) | −0.005 (3) |
C19 | 0.051 (4) | 0.021 (3) | 0.034 (3) | −0.013 (3) | 0.022 (3) | −0.006 (3) |
C20 | 0.040 (4) | 0.026 (3) | 0.023 (3) | −0.005 (3) | 0.013 (3) | 0.000 (2) |
C21 | 0.023 (3) | 0.014 (3) | 0.027 (3) | 0.002 (2) | 0.008 (2) | −0.003 (2) |
C22 | 0.031 (4) | 0.024 (3) | 0.022 (3) | 0.002 (3) | 0.006 (3) | 0.001 (2) |
C24 | 0.030 (4) | 0.016 (3) | 0.027 (3) | 0.002 (3) | 0.012 (3) | −0.004 (2) |
C25 | 0.025 (4) | 0.026 (3) | 0.033 (3) | −0.002 (3) | 0.007 (3) | 0.003 (3) |
C26 | 0.024 (4) | 0.024 (3) | 0.039 (3) | 0.006 (3) | 0.011 (3) | 0.002 (3) |
C27 | 0.034 (4) | 0.022 (3) | 0.043 (3) | 0.001 (3) | 0.015 (3) | −0.009 (3) |
C28 | 0.037 (4) | 0.022 (3) | 0.038 (3) | −0.005 (3) | 0.010 (3) | −0.011 (3) |
C29 | 0.028 (4) | 0.017 (3) | 0.028 (3) | 0.002 (3) | 0.012 (3) | 0.001 (2) |
C30 | 0.033 (4) | 0.024 (3) | 0.021 (3) | 0.000 (3) | 0.007 (3) | −0.005 (2) |
C32 | 0.019 (3) | 0.020 (3) | 0.035 (3) | 0.000 (3) | 0.010 (3) | 0.001 (2) |
N1 | 0.030 (3) | 0.019 (2) | 0.034 (3) | 0.003 (2) | 0.011 (2) | 0.000 (2) |
N2 | 0.027 (3) | 0.016 (2) | 0.029 (2) | −0.002 (2) | 0.009 (2) | 0.0015 (19) |
N3 | 0.025 (3) | 0.020 (2) | 0.036 (3) | −0.009 (2) | 0.005 (2) | −0.003 (2) |
N4 | 0.021 (3) | 0.025 (3) | 0.034 (2) | −0.004 (2) | 0.001 (2) | 0.001 (2) |
N5 | 0.024 (3) | 0.019 (2) | 0.025 (2) | 0.001 (2) | 0.007 (2) | −0.0008 (19) |
N6 | 0.026 (3) | 0.021 (2) | 0.028 (2) | 0.001 (2) | 0.011 (2) | 0.003 (2) |
N7 | 0.023 (3) | 0.028 (3) | 0.035 (3) | −0.005 (2) | 0.005 (2) | −0.006 (2) |
N8 | 0.032 (3) | 0.042 (3) | 0.057 (3) | −0.006 (3) | 0.017 (3) | −0.016 (3) |
N9 | 0.020 (3) | 0.019 (2) | 0.031 (2) | −0.002 (2) | 0.007 (2) | −0.0047 (19) |
N10 | 0.020 (3) | 0.017 (2) | 0.022 (2) | −0.001 (2) | 0.0064 (19) | −0.0004 (18) |
N11 | 0.022 (3) | 0.026 (3) | 0.023 (2) | −0.010 (2) | 0.000 (2) | 0.0038 (19) |
N12 | 0.030 (3) | 0.026 (3) | 0.039 (3) | −0.011 (2) | 0.007 (2) | 0.002 (2) |
N13 | 0.023 (3) | 0.018 (2) | 0.029 (2) | 0.001 (2) | 0.009 (2) | −0.0018 (19) |
N14 | 0.017 (3) | 0.021 (2) | 0.025 (2) | 0.002 (2) | 0.0043 (19) | −0.0006 (19) |
N15 | 0.028 (3) | 0.023 (2) | 0.021 (2) | 0.001 (2) | −0.004 (2) | −0.0029 (18) |
N16 | 0.031 (3) | 0.028 (3) | 0.036 (3) | 0.007 (2) | 0.000 (2) | −0.010 (2) |
N17 | 0.041 (4) | 0.041 (3) | 0.042 (3) | −0.006 (3) | 0.006 (3) | −0.006 (3) |
N18 | 0.026 (3) | 0.031 (3) | 0.028 (3) | −0.003 (3) | 0.002 (2) | 0.004 (2) |
N19 | 0.037 (4) | 0.031 (3) | 0.039 (3) | −0.005 (3) | 0.009 (3) | 0.007 (2) |
N20 | 0.032 (3) | 0.031 (3) | 0.041 (3) | 0.010 (3) | 0.000 (3) | −0.001 (2) |
O1 | 0.063 (3) | 0.077 (4) | 0.059 (3) | −0.036 (3) | 0.038 (3) | −0.026 (3) |
O2 | 0.081 (4) | 0.059 (3) | 0.075 (3) | −0.013 (3) | 0.042 (3) | −0.022 (3) |
O3 | 0.053 (3) | 0.046 (3) | 0.061 (3) | −0.020 (3) | 0.006 (2) | −0.003 (2) |
O4 | 0.023 (2) | 0.030 (2) | 0.043 (2) | −0.0044 (19) | 0.0008 (19) | 0.0046 (18) |
O5 | 0.028 (3) | 0.033 (2) | 0.054 (3) | 0.005 (2) | −0.005 (2) | 0.001 (2) |
O6 | 0.038 (3) | 0.019 (2) | 0.045 (2) | −0.0062 (19) | 0.012 (2) | −0.0087 (18) |
O7 | 0.051 (3) | 0.021 (2) | 0.072 (3) | −0.004 (2) | 0.036 (2) | −0.008 (2) |
O8 | 0.049 (3) | 0.047 (3) | 0.058 (3) | 0.019 (3) | 0.011 (2) | 0.006 (2) |
O9 | 0.065 (3) | 0.059 (3) | 0.058 (3) | −0.045 (3) | −0.014 (3) | 0.015 (2) |
O10 | 0.047 (3) | 0.027 (2) | 0.037 (2) | −0.004 (2) | −0.007 (2) | 0.0000 (18) |
O11 | 0.046 (3) | 0.037 (2) | 0.046 (3) | −0.008 (2) | 0.010 (2) | 0.007 (2) |
O12 | 0.046 (3) | 0.046 (3) | 0.033 (2) | 0.008 (2) | −0.006 (2) | −0.005 (2) |
O1W | 0.066 (3) | 0.076 (3) | 0.040 (3) | −0.008 (3) | 0.010 (2) | 0.004 (2) |
O2W | 0.048 (3) | 0.070 (3) | 0.061 (3) | 0.002 (3) | 0.018 (2) | 0.005 (2) |
O3W | 0.046 (3) | 0.034 (2) | 0.040 (2) | −0.001 (2) | 0.012 (2) | −0.0074 (19) |
O4W | 0.046 (3) | 0.053 (3) | 0.055 (3) | −0.010 (2) | −0.008 (2) | 0.004 (2) |
Zn1—N6 | 2.133 (4) | C21—C22 | 1.463 (7) |
Zn1—N2 | 2.133 (4) | C22—N10 | 1.283 (6) |
Zn1—N5 | 2.196 (4) | C22—H22A | 0.9300 |
Zn1—N1 | 2.211 (4) | C24—N12 | 1.319 (6) |
Zn1—S1 | 2.4678 (15) | C24—N11 | 1.356 (6) |
Zn1—S2 | 2.4860 (16) | C25—N13 | 1.331 (6) |
Zn2—N10 | 2.165 (4) | C25—C26 | 1.389 (7) |
Zn2—N14 | 2.165 (4) | C25—H25A | 0.9300 |
Zn2—N13 | 2.178 (4) | C26—C27 | 1.372 (7) |
Zn2—N9 | 2.203 (4) | C26—H26A | 0.9300 |
Zn2—S4 | 2.4475 (15) | C27—C28 | 1.393 (7) |
Zn2—S3 | 2.4733 (15) | C27—H27A | 0.9300 |
S1—C8 | 1.692 (5) | C28—C29 | 1.380 (7) |
S2—C16 | 1.689 (6) | C28—H28A | 0.9300 |
S3—C24 | 1.688 (5) | C29—N13 | 1.356 (6) |
S4—C32 | 1.690 (5) | C29—C30 | 1.464 (7) |
C1—N1 | 1.319 (6) | C30—N14 | 1.270 (6) |
C1—C2 | 1.386 (7) | C30—H30A | 0.9300 |
C1—H1A | 0.9300 | C32—N16 | 1.304 (6) |
C2—C3 | 1.385 (7) | C32—N15 | 1.369 (6) |
C2—H2A | 0.9300 | N2—N3 | 1.361 (5) |
C3—C4 | 1.372 (7) | N3—H3B | 0.8600 |
C3—H3A | 0.9300 | N4—H4B | 0.8600 |
C4—C5 | 1.388 (7) | N4—H4C | 0.8600 |
C4—H4A | 0.9300 | N6—N7 | 1.367 (5) |
C5—N1 | 1.349 (6) | N7—H7A | 0.8600 |
C5—C6 | 1.445 (7) | N8—H8A | 0.8600 |
C6—N2 | 1.273 (6) | N8—H8B | 0.8600 |
C6—H6A | 0.9300 | N10—N11 | 1.359 (5) |
C8—N4 | 1.314 (6) | N11—H11B | 0.8600 |
C8—N3 | 1.353 (6) | N12—H12B | 0.8600 |
C9—N5 | 1.322 (6) | N12—H12C | 0.8600 |
C9—C10 | 1.404 (7) | N14—N15 | 1.348 (5) |
C9—H9A | 0.9300 | N15—H15A | 0.8600 |
C10—C11 | 1.375 (7) | N16—H16A | 0.8600 |
C10—H10A | 0.9300 | N16—H16B | 0.8600 |
C11—C12 | 1.371 (7) | N17—O1 | 1.233 (6) |
C11—H11A | 0.9300 | N17—O2 | 1.249 (6) |
C12—C13 | 1.375 (6) | N17—O3 | 1.250 (6) |
C12—H12A | 0.9300 | N18—O4 | 1.252 (5) |
C13—N5 | 1.347 (6) | N18—O5 | 1.256 (5) |
C13—C14 | 1.452 (7) | N18—O6 | 1.258 (5) |
C14—N6 | 1.273 (6) | N19—O9 | 1.229 (5) |
C14—H14A | 0.9300 | N19—O8 | 1.238 (5) |
C16—N8 | 1.329 (6) | N19—O7 | 1.249 (5) |
C16—N7 | 1.354 (6) | N20—O12 | 1.236 (5) |
C17—N9 | 1.328 (6) | N20—O11 | 1.252 (5) |
C17—C18 | 1.387 (7) | N20—O10 | 1.281 (5) |
C17—H17A | 0.9300 | O1W—H1WA | 0.8500 |
C18—C19 | 1.359 (7) | O1W—H1WB | 0.8501 |
C18—H18A | 0.9300 | O2W—H2WA | 0.8499 |
C19—C20 | 1.394 (7) | O2W—H2WB | 0.8500 |
C19—H19A | 0.9300 | O3W—H3WA | 0.8502 |
C20—C21 | 1.383 (6) | O3W—H3WB | 0.8500 |
C20—H20A | 0.9300 | O4W—H4WA | 0.8500 |
C21—N9 | 1.347 (6) | O4W—H4WB | 0.8502 |
N6—Zn1—N2 | 167.04 (16) | N10—C22—C21 | 116.6 (5) |
N6—Zn1—N5 | 74.23 (16) | N10—C22—H22A | 121.7 |
N2—Zn1—N5 | 97.52 (16) | C21—C22—H22A | 121.7 |
N6—Zn1—N1 | 95.16 (16) | N12—C24—N11 | 116.2 (5) |
N2—Zn1—N1 | 74.32 (16) | N12—C24—S3 | 121.4 (4) |
N5—Zn1—N1 | 88.34 (15) | N11—C24—S3 | 122.4 (4) |
N6—Zn1—S1 | 110.45 (11) | N13—C25—C26 | 123.0 (5) |
N2—Zn1—S1 | 79.34 (12) | N13—C25—H25A | 118.5 |
N5—Zn1—S1 | 91.99 (11) | C26—C25—H25A | 118.5 |
N1—Zn1—S1 | 153.47 (13) | C27—C26—C25 | 119.1 (5) |
N6—Zn1—S2 | 78.96 (12) | C27—C26—H26A | 120.5 |
N2—Zn1—S2 | 108.58 (11) | C25—C26—H26A | 120.5 |
N5—Zn1—S2 | 153.14 (12) | C26—C27—C28 | 118.9 (5) |
N1—Zn1—S2 | 92.62 (11) | C26—C27—H27A | 120.6 |
S1—Zn1—S2 | 98.79 (5) | C28—C27—H27A | 120.6 |
N10—Zn2—N14 | 169.14 (15) | C29—C28—C27 | 118.6 (5) |
N10—Zn2—N13 | 97.54 (15) | C29—C28—H28A | 120.7 |
N14—Zn2—N13 | 73.92 (16) | C27—C28—H28A | 120.7 |
N10—Zn2—N9 | 73.97 (15) | N13—C29—C28 | 122.7 (5) |
N14—Zn2—N9 | 99.09 (15) | N13—C29—C30 | 115.1 (4) |
N13—Zn2—N9 | 90.90 (15) | C28—C29—C30 | 122.1 (5) |
N10—Zn2—S4 | 109.51 (11) | N14—C30—C29 | 116.6 (5) |
N14—Zn2—S4 | 78.71 (11) | N14—C30—H30A | 121.7 |
N13—Zn2—S4 | 152.61 (12) | C29—C30—H30A | 121.7 |
N9—Zn2—S4 | 92.42 (11) | N16—C32—N15 | 116.1 (5) |
N10—Zn2—S3 | 78.04 (11) | N16—C32—S4 | 121.2 (4) |
N14—Zn2—S3 | 108.77 (11) | N15—C32—S4 | 122.7 (4) |
N13—Zn2—S3 | 93.90 (11) | C1—N1—C5 | 118.7 (5) |
N9—Zn2—S3 | 151.99 (12) | C1—N1—Zn1 | 127.7 (4) |
S4—Zn2—S3 | 95.80 (5) | C5—N1—Zn1 | 113.5 (3) |
C8—S1—Zn1 | 97.99 (18) | C6—N2—N3 | 121.0 (4) |
C16—S2—Zn1 | 97.7 (2) | C6—N2—Zn1 | 118.6 (4) |
C24—S3—Zn2 | 98.53 (19) | N3—N2—Zn1 | 120.4 (3) |
C32—S4—Zn2 | 99.06 (19) | C8—N3—N2 | 119.7 (4) |
N1—C1—C2 | 122.7 (6) | C8—N3—H3B | 120.2 |
N1—C1—H1A | 118.6 | N2—N3—H3B | 120.2 |
C2—C1—H1A | 118.6 | C8—N4—H4B | 120.0 |
C3—C2—C1 | 119.0 (6) | C8—N4—H4C | 120.0 |
C3—C2—H2A | 120.5 | H4B—N4—H4C | 120.0 |
C1—C2—H2A | 120.5 | C9—N5—C13 | 118.6 (4) |
C4—C3—C2 | 118.5 (5) | C9—N5—Zn1 | 126.8 (3) |
C4—C3—H3A | 120.7 | C13—N5—Zn1 | 114.6 (3) |
C2—C3—H3A | 120.7 | C14—N6—N7 | 120.2 (5) |
C3—C4—C5 | 119.4 (6) | C14—N6—Zn1 | 118.6 (4) |
C3—C4—H4A | 120.3 | N7—N6—Zn1 | 121.1 (3) |
C5—C4—H4A | 120.3 | C16—N7—N6 | 118.8 (4) |
N1—C5—C4 | 121.7 (5) | C16—N7—H7A | 120.6 |
N1—C5—C6 | 116.2 (5) | N6—N7—H7A | 120.6 |
C4—C5—C6 | 122.1 (5) | C16—N8—H8A | 120.0 |
N2—C6—C5 | 117.2 (5) | C16—N8—H8B | 120.0 |
N2—C6—H6A | 121.4 | H8A—N8—H8B | 120.0 |
C5—C6—H6A | 121.4 | C17—N9—C21 | 118.1 (4) |
N4—C8—N3 | 115.3 (5) | C17—N9—Zn2 | 127.2 (3) |
N4—C8—S1 | 122.1 (4) | C21—N9—Zn2 | 114.7 (3) |
N3—C8—S1 | 122.6 (4) | C22—N10—N11 | 120.9 (4) |
N5—C9—C10 | 121.5 (5) | C22—N10—Zn2 | 117.9 (4) |
N5—C9—H9A | 119.3 | N11—N10—Zn2 | 121.1 (3) |
C10—C9—H9A | 119.3 | C24—N11—N10 | 118.5 (4) |
C11—C10—C9 | 119.1 (5) | C24—N11—H11B | 120.7 |
C11—C10—H10A | 120.5 | N10—N11—H11B | 120.7 |
C9—C10—H10A | 120.5 | C24—N12—H12B | 120.0 |
C12—C11—C10 | 119.3 (5) | C24—N12—H12C | 120.0 |
C12—C11—H11A | 120.4 | H12B—N12—H12C | 120.0 |
C10—C11—H11A | 120.4 | C25—N13—C29 | 117.7 (4) |
C11—C12—C13 | 118.5 (5) | C25—N13—Zn2 | 126.7 (3) |
C11—C12—H12A | 120.7 | C29—N13—Zn2 | 115.6 (3) |
C13—C12—H12A | 120.7 | C30—N14—N15 | 120.2 (4) |
N5—C13—C12 | 123.0 (5) | C30—N14—Zn2 | 118.6 (4) |
N5—C13—C14 | 115.3 (4) | N15—N14—Zn2 | 121.1 (3) |
C12—C13—C14 | 121.7 (5) | N14—N15—C32 | 118.4 (4) |
N6—C14—C13 | 117.2 (5) | N14—N15—H15A | 120.8 |
N6—C14—H14A | 121.4 | C32—N15—H15A | 120.8 |
C13—C14—H14A | 121.4 | C32—N16—H16A | 120.0 |
N8—C16—N7 | 115.1 (5) | C32—N16—H16B | 120.0 |
N8—C16—S2 | 121.5 (4) | H16A—N16—H16B | 120.0 |
N7—C16—S2 | 123.3 (4) | O1—N17—O2 | 120.8 (5) |
N9—C17—C18 | 123.4 (5) | O1—N17—O3 | 120.7 (5) |
N9—C17—H17A | 118.3 | O2—N17—O3 | 118.5 (6) |
C18—C17—H17A | 118.3 | O4—N18—O5 | 120.5 (4) |
C19—C18—C17 | 118.2 (5) | O4—N18—O6 | 120.0 (5) |
C19—C18—H18A | 120.9 | O5—N18—O6 | 119.5 (5) |
C17—C18—H18A | 120.9 | O9—N19—O8 | 120.5 (5) |
C18—C19—C20 | 119.8 (5) | O9—N19—O7 | 120.2 (6) |
C18—C19—H19A | 120.1 | O8—N19—O7 | 119.3 (5) |
C20—C19—H19A | 120.1 | O12—N20—O11 | 121.5 (5) |
C21—C20—C19 | 118.3 (5) | O12—N20—O10 | 120.1 (5) |
C21—C20—H20A | 120.9 | O11—N20—O10 | 118.4 (5) |
C19—C20—H20A | 120.9 | H1WA—O1W—H1WB | 112.2 |
N9—C21—C20 | 122.1 (5) | H2WA—O2W—H2WB | 127.8 |
N9—C21—C22 | 115.9 (4) | H3WA—O3W—H3WB | 100.8 |
C20—C21—C22 | 121.9 (5) | H4WA—O4W—H4WB | 108.9 |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3B···O7 | 0.86 | 2.19 | 2.966 (6) | 150 |
N4—H4B···O7 | 0.86 | 2.17 | 2.957 (6) | 153 |
N4—H4C···O3W | 0.86 | 2.03 | 2.840 (5) | 157 |
N7—H7A···O1 | 0.86 | 1.96 | 2.813 (6) | 172 |
N8—H8A···O2 | 0.86 | 2.08 | 2.906 (6) | 160 |
N8—H8B···O6i | 0.86 | 2.04 | 2.870 (6) | 163 |
N11—H11B···O10 | 0.86 | 1.87 | 2.710 (5) | 167 |
N12—H12B···O11 | 0.86 | 2.02 | 2.876 (6) | 173 |
N12—H12C···O8ii | 0.86 | 2.27 | 3.114 (6) | 168 |
N15—H15A···O4Wiii | 0.86 | 1.87 | 2.733 (5) | 178 |
N16—H16A···O6iii | 0.86 | 2.11 | 2.909 (6) | 155 |
N16—H16B···O4iv | 0.86 | 2.02 | 2.873 (5) | 173 |
O1W—H1WA···O4v | 0.85 | 2.32 | 3.042 (5) | 144 |
O1W—H1WB···O3 | 0.85 | 2.39 | 3.041 (6) | 134 |
O2W—H2WA···O5iv | 0.85 | 2.33 | 2.927 (6) | 128 |
O2W—H2WB···O3 | 0.85 | 2.47 | 3.141 (6) | 136 |
O3W—H3WA···O10vi | 0.85 | 2.22 | 2.800 (5) | 126 |
O3W—H3WB···O9vii | 0.85 | 2.24 | 2.978 (6) | 145 |
O4W—H4WA···O2W | 0.85 | 2.09 | 2.746 (6) | 133 |
O4W—H4WB···O6 | 0.85 | 2.55 | 2.958 (5) | 111 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, −y+1/2, z+1/2; (iii) x, −y+3/2, z+1/2; (iv) −x+1, y−1/2, −z+3/2; (v) x, −y+3/2, z−1/2; (vi) −x, y−1/2, −z+1/2; (vii) −x, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C7H8N4S)2](NO3)2·2H2O |
Mr | 585.89 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 120 |
a, b, c (Å) | 21.4623 (14), 16.6324 (12), 13.2764 (10) |
β (°) | 102.876 (2) |
V (Å3) | 4620.1 (6) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 1.31 |
Crystal size (mm) | 0.25 × 0.22 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2008a) |
Tmin, Tmax | 0.736, 0.780 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 22904, 8732, 5113 |
Rint | 0.077 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.057, 0.123, 1.02 |
No. of reflections | 8732 |
No. of parameters | 631 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.81, −0.43 |
Computer programs: SMART (Bruker, 2000), SAINT (Bruker, 2000), SHELXTL (Sheldrick, 2008b), SHELXL97 (Sheldrick, 2008b), ORTEPIII (Burnett & Johnson, 1996) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3B···O7 | 0.86 | 2.19 | 2.966 (6) | 150.3 |
N4—H4B···O7 | 0.86 | 2.17 | 2.957 (6) | 152.6 |
N4—H4C···O3W | 0.86 | 2.03 | 2.840 (5) | 156.5 |
N7—H7A···O1 | 0.86 | 1.96 | 2.813 (6) | 171.9 |
N8—H8A···O2 | 0.86 | 2.08 | 2.906 (6) | 160.1 |
N8—H8B···O6i | 0.86 | 2.04 | 2.870 (6) | 163.1 |
N11—H11B···O10 | 0.86 | 1.87 | 2.710 (5) | 166.7 |
N12—H12B···O11 | 0.86 | 2.02 | 2.876 (6) | 173.0 |
N12—H12C···O8ii | 0.86 | 2.27 | 3.114 (6) | 167.5 |
N15—H15A···O4Wiii | 0.86 | 1.87 | 2.733 (5) | 178.3 |
N16—H16A···O6iii | 0.86 | 2.11 | 2.909 (6) | 154.5 |
N16—H16B···O4iv | 0.86 | 2.02 | 2.873 (5) | 172.8 |
O1W—H1WA···O4v | 0.85 | 2.32 | 3.042 (5) | 143.7 |
O1W—H1WB···O3 | 0.85 | 2.39 | 3.041 (6) | 133.9 |
O2W—H2WA···O5iv | 0.85 | 2.33 | 2.927 (6) | 127.6 |
O2W—H2WB···O3 | 0.85 | 2.47 | 3.141 (6) | 136.0 |
O3W—H3WA···O10vi | 0.85 | 2.22 | 2.800 (5) | 125.8 |
O3W—H3WB···O9vii | 0.85 | 2.24 | 2.978 (6) | 144.5 |
O4W—H4WA···O2W | 0.85 | 2.09 | 2.746 (6) | 133.2 |
O4W—H4WB···O6 | 0.85 | 2.55 | 2.958 (5) | 110.9 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, −y+1/2, z+1/2; (iii) x, −y+3/2, z+1/2; (iv) −x+1, y−1/2, −z+3/2; (v) x, −y+3/2, z−1/2; (vi) −x, y−1/2, −z+1/2; (vii) −x, y+1/2, −z+1/2. |
Acknowledgements
The authors thank the Program for Young Excellent Talents in Southeast University for financial support.
References
Ainscough, E. W., Brodie, A. M., Denny, W. A., Finlay, G. J. & Ranford, J. D. (1998). J. Inorg. Biochem. 70, 175–185. Web of Science CrossRef CAS PubMed Google Scholar
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Bruker (2000). SMART and SAINT-Plus. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Burnett, M. N. & Johnson, C. K. (1996). ORTEPIII. Report ORNL-6895. Oak Ridge National Laboratory, Tennessee, USA. Google Scholar
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The examination of the antitumor properties of N-heterocyclic carboxaldehyde thiosemicarbazones has been extended to the consideration of some of their first-row transition metal complexes (Antholine et al. 1977, Ainscough et al. 1998). Meanwhile, zinc plays an important role in various biological systems and is a vital component an essential cofactor, critical for numerous cellular processes and may be a major regulatory ion in the metabolism of cells. Herein, we report a ZnII complex, Zn(pht)2.2NO3.2H2O (pht= 2-(pyridine-2-carbaldehyde)hydrazinecarbothioamide).
The asymmetric unit of the title compound, contains two Zn(pht)2 cations (pht = 2-(pyridine-2-carbaldehyde)hydrazinecarbothioamide), which have the similar structure, four nitrates and four free water molecules. In the Zn(pht)2 cations, each ZnII ions adopts a distorted octahedral coordination geometry, being chelated by two tridentate pht ligands. In a pht, all the atoms are approximatively coplanar, and the distances of the C=N bond are 1.269 (6)–1.283 (6) Å, which are shorter than those of C—N bond (1.303 (7)–1.369 (6) Å), being considered to have full double-bond character. In packing, All the Zn(pht)2 cations, nitrates and water molecules are linked each other via O—H···O and N—H···O hydrogen bonds into a three-dimensional supramolecular network.