organic compounds
(E)-Ethyl 2-cyano-3-[5-nitro-2-(pyrrolidin-1-yl)phenyl]acrylate
aLaboratoire de Cristallographie et Physique Moléculaire, UFR–SSMT, Université de Cocody, 22 BP 582 Abidjan 22, Côte d'Ivoire, and bLaboratoire de Chimie Organique Structurale, UFR–SSMT, Université de Cocody, 22 BP 582 Abidjan 22, Côte d'Ivoire
*Correspondence e-mail: marcellin.yapo@univ-cocody.ci
The title compound, C16H17N3O4, was prepared by the reaction of 5-nitro-2-(pyrrolidin-1-yl)benzaldehyde and ethyl cyanoacetate. The molecular structure adopts an E conformation with respect to the C=C double bond. The five-membered ring has a half-chair conformation, with puckering parameters Q(2)= 0.399 (2) Å and φ = 93.1 (3)°. In the crystal, inversion dimers , linked by pairs of C—H⋯O interactions, are further connected through C—H⋯N hydrogen bonds. Weak slipped π-π interactions occur between symmetry-related benzene rings [centroid–centroid distance = 3.785 (1)Å].
Related literature
For related structures, see: Yapo et al. (2010); Zhang et al. (2009a,b). For reference bond lengths, see: Allen (2002). For ring conformation analysis, see: Cremer & Pople (1975).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: COLLECT (Nonius, 2001); cell DENZO/SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO/SCALEPACK; program(s) used to solve structure: SIR2004 (Burla et al., 2005); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003); molecular graphics: ORTEPIII (Burnett & Johnson, 1996), ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: CRYSTALS.
Supporting information
10.1107/S1600536810033374/dn2594sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810033374/dn2594Isup2.hkl
To a solution of 5-nitro-2-(pyrrolidin-1-yl)benzaldehyde (2, 9.03 mmol) in anhydrous ethanol (25 ml), ethyl cyanoacetate (2.1 ml, 10.1 mmol) was added. Maintained at room temperature and under magnetic agitation, triethylamine (3 ml) was dropped into the solution. The reaction mixture was maintained at room temperature for 30 min then heated to ethanol reflux during 2 h. After cooling, the precipitate was filtred and then washed with ethanol to obtain yellow crystals in 77% yield. The melting point is 457–458 K.
The H atoms were geometrically positioned and treated as riding with C—H in the range 0.93–0.98Å and Uiso(H) in the range 1.2–1.5 times Ueq of the parent atom.
Data collection: COLLECT (Nonius, 2001); cell
DENZO/SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO/SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SIR2004 (Burla et al., 2005); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003); molecular graphics: ORTEPIII (Burnett & Johnson, 1996), ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: CRYSTALS (Betteridge et al., 2003).C16H17N3O4 | Z = 2 |
Mr = 315.33 | F(000) = 332 |
Triclinic, P1 | Dx = 1.366 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.4137 (3) Å | Cell parameters from 12261 reflections |
b = 9.9517 (4) Å | θ = 4–29° |
c = 10.3731 (5) Å | µ = 0.10 mm−1 |
α = 73.065 (1)° | T = 223 K |
β = 71.388 (2)° | Prism, yellow |
γ = 72.523 (4)° | 0.15 × 0.05 × 0.05 mm |
V = 766.56 (6) Å3 |
Nonius KappaCCD diffractometer | Rint = 0.04 |
Graphite monochromator | θmax = 29.1°, θmin = 2.1° |
ϕ & ω scans | h = 0→11 |
12261 measured reflections | k = −12→13 |
3925 independent reflections | l = −12→14 |
2436 reflections with I > 3σ(I) |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.045 | H-atom parameters constrained |
wR(F2) = 0.098 | w = 1/[σ2(F2) + (0.04P)2 + 0.41P] where P = [max(Fo2,0) + 2Fc2]/3 |
S = 1.01 | (Δ/σ)max = 0.000211 |
2436 reflections | Δρmax = 0.29 e Å−3 |
208 parameters | Δρmin = −0.19 e Å−3 |
0 restraints |
C16H17N3O4 | γ = 72.523 (4)° |
Mr = 315.33 | V = 766.56 (6) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.4137 (3) Å | Mo Kα radiation |
b = 9.9517 (4) Å | µ = 0.10 mm−1 |
c = 10.3731 (5) Å | T = 223 K |
α = 73.065 (1)° | 0.15 × 0.05 × 0.05 mm |
β = 71.388 (2)° |
Nonius KappaCCD diffractometer | 2436 reflections with I > 3σ(I) |
12261 measured reflections | Rint = 0.04 |
3925 independent reflections |
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.098 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.29 e Å−3 |
2436 reflections | Δρmin = −0.19 e Å−3 |
208 parameters |
x | y | z | Uiso*/Ueq | ||
O4 | 0.24506 (16) | 0.75552 (14) | 0.34637 (12) | 0.0392 | |
C6 | 0.6744 (2) | 0.54044 (17) | 0.08814 (16) | 0.0272 | |
O3 | 0.38346 (18) | 0.74040 (16) | 0.50501 (13) | 0.0501 | |
N1 | 0.58761 (18) | 0.70320 (15) | −0.12042 (14) | 0.0318 | |
C11 | 0.5357 (2) | 0.61576 (17) | 0.18686 (16) | 0.0288 | |
C10 | 0.8072 (2) | 0.48737 (19) | −0.14342 (18) | 0.0349 | |
O2 | 1.03617 (19) | 0.19215 (16) | 0.22812 (15) | 0.0536 | |
C14 | 0.3815 (2) | 0.71447 (18) | 0.39891 (17) | 0.0335 | |
C5 | 0.6844 (2) | 0.58161 (18) | −0.05898 (16) | 0.0281 | |
C7 | 0.7910 (2) | 0.41913 (18) | 0.13881 (17) | 0.0302 | |
C8 | 0.9117 (2) | 0.33592 (18) | 0.05070 (18) | 0.0323 | |
N2 | 1.0334 (2) | 0.21267 (17) | 0.10625 (17) | 0.0405 | |
C12 | 0.5355 (2) | 0.63394 (17) | 0.31088 (16) | 0.0295 | |
O1 | 1.1330 (2) | 0.13387 (17) | 0.02781 (17) | 0.0640 | |
C13 | 0.6834 (2) | 0.5867 (2) | 0.36710 (18) | 0.0355 | |
N3 | 0.7983 (2) | 0.5498 (2) | 0.41549 (19) | 0.0528 | |
C9 | 0.9177 (2) | 0.3684 (2) | −0.09019 (18) | 0.0361 | |
C1 | 0.6073 (3) | 0.7384 (2) | −0.27297 (18) | 0.0420 | |
C4 | 0.4900 (2) | 0.83167 (19) | −0.06191 (18) | 0.0374 | |
C16 | −0.0507 (3) | 0.8668 (2) | 0.3594 (2) | 0.0538 | |
C15 | 0.0917 (3) | 0.8417 (3) | 0.4249 (2) | 0.0524 | |
C2 | 0.4880 (3) | 0.8854 (2) | −0.2995 (2) | 0.0520 | |
C3 | 0.4940 (3) | 0.9553 (2) | −0.18931 (19) | 0.0458 | |
H111 | 0.4299 | 0.6579 | 0.1601 | 0.0408* | |
H101 | 0.8112 | 0.5097 | −0.2402 | 0.0501* | |
H71 | 0.7850 | 0.3922 | 0.2355 | 0.0416* | |
H91 | 1.0005 | 0.3059 | −0.1485 | 0.0499* | |
H11 | 0.7291 | 0.7413 | −0.3221 | 0.0611* | |
H12 | 0.5771 | 0.6646 | −0.3001 | 0.0612* | |
H41 | 0.5454 | 0.8431 | 0.0025 | 0.0516* | |
H42 | 0.3687 | 0.8243 | −0.0126 | 0.0529* | |
H161 | −0.1516 | 0.9310 | 0.4046 | 0.0975* | |
H162 | −0.0169 | 0.9098 | 0.2594 | 0.0977* | |
H163 | −0.0794 | 0.7744 | 0.3742 | 0.0981* | |
H151 | 0.1190 | 0.9366 | 0.4202 | 0.0740* | |
H152 | 0.0663 | 0.7875 | 0.5221 | 0.0730* | |
H21 | 0.5289 | 0.9403 | −0.3927 | 0.0751* | |
H22 | 0.3698 | 0.8790 | −0.2855 | 0.0754* | |
H31 | 0.6032 | 0.9898 | −0.2180 | 0.0663* | |
H32 | 0.3939 | 1.0346 | −0.1743 | 0.0659* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O4 | 0.0392 (7) | 0.0457 (8) | 0.0277 (6) | 0.0026 (6) | −0.0057 (5) | −0.0162 (5) |
C6 | 0.0280 (8) | 0.0315 (9) | 0.0230 (8) | −0.0089 (7) | −0.0040 (6) | −0.0078 (6) |
O3 | 0.0563 (9) | 0.0652 (10) | 0.0332 (7) | −0.0074 (7) | −0.0099 (6) | −0.0257 (7) |
N1 | 0.0394 (8) | 0.0349 (8) | 0.0223 (7) | −0.0071 (6) | −0.0101 (6) | −0.0070 (6) |
C11 | 0.0311 (8) | 0.0297 (9) | 0.0234 (8) | −0.0071 (7) | −0.0044 (6) | −0.0054 (6) |
C10 | 0.0393 (10) | 0.0416 (10) | 0.0250 (8) | −0.0098 (8) | −0.0041 (7) | −0.0132 (7) |
O2 | 0.0579 (9) | 0.0499 (9) | 0.0435 (8) | 0.0042 (7) | −0.0192 (7) | −0.0063 (6) |
C14 | 0.0419 (10) | 0.0331 (9) | 0.0239 (8) | −0.0076 (7) | −0.0058 (7) | −0.0076 (7) |
C5 | 0.0286 (8) | 0.0332 (9) | 0.0254 (8) | −0.0107 (7) | −0.0053 (6) | −0.0085 (7) |
C7 | 0.0320 (9) | 0.0330 (9) | 0.0259 (8) | −0.0091 (7) | −0.0056 (7) | −0.0073 (7) |
C8 | 0.0298 (9) | 0.0312 (9) | 0.0349 (9) | −0.0063 (7) | −0.0060 (7) | −0.0091 (7) |
N2 | 0.0365 (9) | 0.0372 (9) | 0.0431 (9) | −0.0042 (7) | −0.0065 (7) | −0.0099 (7) |
C12 | 0.0349 (9) | 0.0290 (8) | 0.0238 (8) | −0.0086 (7) | −0.0063 (7) | −0.0045 (6) |
O1 | 0.0590 (9) | 0.0562 (10) | 0.0616 (10) | 0.0174 (8) | −0.0105 (8) | −0.0274 (8) |
C13 | 0.0427 (10) | 0.0390 (10) | 0.0266 (9) | −0.0133 (8) | −0.0060 (8) | −0.0086 (7) |
N3 | 0.0521 (11) | 0.0654 (12) | 0.0484 (10) | −0.0155 (9) | −0.0213 (9) | −0.0120 (9) |
C9 | 0.0359 (10) | 0.0375 (10) | 0.0345 (9) | −0.0089 (8) | −0.0015 (7) | −0.0149 (8) |
C1 | 0.0566 (12) | 0.0467 (11) | 0.0233 (9) | −0.0082 (9) | −0.0149 (8) | −0.0069 (8) |
C4 | 0.0435 (10) | 0.0360 (10) | 0.0300 (9) | −0.0026 (8) | −0.0103 (8) | −0.0090 (7) |
C16 | 0.0431 (11) | 0.0587 (14) | 0.0599 (14) | −0.0028 (10) | −0.0097 (10) | −0.0260 (11) |
C15 | 0.0436 (12) | 0.0621 (14) | 0.0447 (12) | 0.0086 (10) | −0.0054 (9) | −0.0295 (10) |
C2 | 0.0677 (14) | 0.0514 (12) | 0.0346 (10) | −0.0045 (10) | −0.0237 (10) | −0.0036 (9) |
C3 | 0.0582 (13) | 0.0381 (11) | 0.0362 (10) | −0.0049 (9) | −0.0159 (9) | −0.0027 (8) |
O4—C14 | 1.330 (2) | C12—C13 | 1.436 (2) |
O4—C15 | 1.462 (2) | C13—N3 | 1.145 (2) |
C6—C11 | 1.460 (2) | C9—H91 | 0.963 |
C6—C5 | 1.442 (2) | C1—C2 | 1.511 (3) |
C6—C7 | 1.394 (2) | C1—H11 | 0.993 |
O3—C14 | 1.207 (2) | C1—H12 | 0.982 |
N1—C5 | 1.350 (2) | C4—C3 | 1.520 (3) |
N1—C1 | 1.483 (2) | C4—H41 | 0.976 |
N1—C4 | 1.477 (2) | C4—H42 | 0.999 |
C11—C12 | 1.350 (2) | C16—C15 | 1.483 (3) |
C11—H111 | 0.955 | C16—H161 | 0.971 |
C10—C5 | 1.426 (2) | C16—H162 | 0.983 |
C10—C9 | 1.363 (2) | C16—H163 | 0.977 |
C10—H101 | 0.955 | C15—H151 | 1.021 |
O2—N2 | 1.227 (2) | C15—H152 | 0.984 |
C14—C12 | 1.484 (2) | C2—C3 | 1.521 (3) |
C7—C8 | 1.377 (2) | C2—H21 | 0.972 |
C7—H71 | 0.948 | C2—H22 | 0.977 |
C8—N2 | 1.448 (2) | C3—H31 | 1.003 |
C8—C9 | 1.389 (2) | C3—H32 | 0.972 |
N2—O1 | 1.233 (2) | ||
C14—O4—C15 | 114.97 (14) | N1—C1—H11 | 109.3 |
C11—C6—C5 | 121.29 (14) | C2—C1—H11 | 111.6 |
C11—C6—C7 | 119.04 (14) | N1—C1—H12 | 110.4 |
C5—C6—C7 | 119.46 (14) | C2—C1—H12 | 113.0 |
C5—N1—C1 | 120.85 (14) | H11—C1—H12 | 108.5 |
C5—N1—C4 | 127.13 (13) | N1—C4—C3 | 103.67 (14) |
C1—N1—C4 | 110.08 (13) | N1—C4—H41 | 110.4 |
C6—C11—C12 | 129.25 (16) | C3—C4—H41 | 111.7 |
C6—C11—H111 | 115.4 | N1—C4—H42 | 110.9 |
C12—C11—H111 | 115.3 | C3—C4—H42 | 110.4 |
C5—C10—C9 | 122.08 (16) | H41—C4—H42 | 109.6 |
C5—C10—H101 | 118.2 | C15—C16—H161 | 109.4 |
C9—C10—H101 | 119.7 | C15—C16—H162 | 110.6 |
O4—C14—O3 | 124.77 (16) | H161—C16—H162 | 109.5 |
O4—C14—C12 | 112.45 (14) | C15—C16—H163 | 108.3 |
O3—C14—C12 | 122.77 (16) | H161—C16—H163 | 108.3 |
C6—C5—C10 | 116.84 (15) | H162—C16—H163 | 110.7 |
C6—C5—N1 | 124.27 (15) | C16—C15—O4 | 107.71 (16) |
C10—C5—N1 | 118.89 (15) | C16—C15—H151 | 111.3 |
C6—C7—C8 | 120.77 (15) | O4—C15—H151 | 107.9 |
C6—C7—H71 | 119.6 | C16—C15—H152 | 111.9 |
C8—C7—H71 | 119.6 | O4—C15—H152 | 107.8 |
C7—C8—N2 | 119.31 (15) | H151—C15—H152 | 110.0 |
C7—C8—C9 | 120.95 (16) | C1—C2—C3 | 103.20 (15) |
N2—C8—C9 | 119.74 (15) | C1—C2—H21 | 111.2 |
C8—N2—O2 | 119.06 (15) | C3—C2—H21 | 111.1 |
C8—N2—O1 | 118.37 (16) | C1—C2—H22 | 112.1 |
O2—N2—O1 | 122.55 (16) | C3—C2—H22 | 109.2 |
C14—C12—C11 | 122.22 (15) | H21—C2—H22 | 109.9 |
C14—C12—C13 | 113.25 (14) | C2—C3—C4 | 102.37 (16) |
C11—C12—C13 | 124.43 (16) | C2—C3—H31 | 110.2 |
C12—C13—N3 | 178.06 (19) | C4—C3—H31 | 111.5 |
C8—C9—C10 | 119.72 (16) | C2—C3—H32 | 110.2 |
C8—C9—H91 | 119.1 | C4—C3—H32 | 111.6 |
C10—C9—H91 | 121.2 | H31—C3—H32 | 110.7 |
N1—C1—C2 | 103.93 (15) |
D—H···A | D—H | H···A | D···A | D—H···A |
C15—H152···O2i | 0.98 | 2.50 | 3.356 (2) | 145 |
C16—H163···N3ii | 0.98 | 2.60 | 3.574 (3) | 172 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C16H17N3O4 |
Mr | 315.33 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 223 |
a, b, c (Å) | 8.4137 (3), 9.9517 (4), 10.3731 (5) |
α, β, γ (°) | 73.065 (1), 71.388 (2), 72.523 (4) |
V (Å3) | 766.56 (6) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.15 × 0.05 × 0.05 |
Data collection | |
Diffractometer | Nonius KappaCCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 3σ(I)] reflections | 12261, 3925, 2436 |
Rint | 0.04 |
(sin θ/λ)max (Å−1) | 0.683 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.098, 1.01 |
No. of reflections | 2436 |
No. of parameters | 208 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.29, −0.19 |
Computer programs: COLLECT (Nonius, 2001), DENZO/SCALEPACK (Otwinowski & Minor, 1997), SIR2004 (Burla et al., 2005), CRYSTALS (Betteridge et al., 2003), ORTEPIII (Burnett & Johnson, 1996), ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C15—H152···O2i | 0.98 | 2.50 | 3.356 (2) | 145 |
C16—H163···N3ii | 0.98 | 2.60 | 3.574 (3) | 172 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x−1, y, z. |
Acknowledgements
The authors wish to thank the Laboratoire de Physique des Interactions Ioniques et Moléculaires of Provence University (France) for the use of the diffractometer.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Recently, the synthesis and structure of tricyclic quinoline derivative have been widely investigated (Yapo et al., 2010). We report herein the crystal structure of the title compound C16H17N3O4 (I). In fact, it is an intermediate compound on which chemical reactions will be made to obtain tricyclic quinoline derivative containing in its molecular structure two coupled rings: quinoline ring and pyrrolidine ring.
The molecular structure of the title complex displays a E conformation with respect to the C11═C12 double bond. The bond distance C12— C13=1.436 (2)Å agrees with recently reported structures (Zhang et al., 2009a; Zhang et al., 2009b) and is characteristic of single bond occuring between carbone sp1 and carbone sp2 [C(sp1)—C(sp2)]. All other bond lengths and angles are not unusual (Allen, 2002).
The pyrrolidine ring has half-chair conformation with puckering parameters Q(2)= 0.399 (2)Å and ϕ= 93.1 (3)° (Cremer & Pople, 1975)
In the crystal packing, centrosymmetrically related molecules are linked by intermolecular C—H···O hydrogen bonding interactions building pseudo dimers which are further connected through C-H···N hydrogen bonds (Table 1 and Figure 2). Weak π-π interactions occur between symmetry related phenyl rings (Centroid-to-centroid = 3.785 (1)Å, interplanar distance= 3.509Å and a slippage of 1.417Å with symmetry code: (i) 2-x,1-y,-z).