organic compounds
tert-Butyl 4-{[5-(4-chlorophenyl)-1-(4-fluorophenyl)-1H-pyrazol-3-yl]carbonyl}piperazine-1-carboxylate
aOrganic Chemistry Division, School of Advanced Sciences, VIT University, Vellore 632 014, Tamilnadu, India, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: edward.tiekink@gmail.com
In the title pyrazole derivative, C25H26ClFN4O3, both benzene rings are twisted out of the plane through the pyrazole ring, with dihedral angles of 67.62 (10) and 27.63 (10)° for the fluoro- and chloro-substituted rings, respectively. The dihedral angle between the two benzene rings is 64.54 (9)°. The piperazine ring (with a chair conformation) is linked to the pyrazole ring via a carbonyl spacer and is orientated to lie to one side of the pyrazole plane. In addition to an intramolecular C—H⋯N contact, there are intermolecular C—H⋯O interactions, which generate a supramolecular chain with an undulating topology along the c axis that is sustained by alternating centrosymmetric ten-membered {⋯HCNCO}2 and {⋯HC3O}2 synthons.
Related literature
For the pharmacological potential of pyrazol derivatives, see: Ragavan et al. (2009). For the synthesis, see: Ragavan et al. (2010). For a related structure, see: Samshuddin et al. (2010).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536810038560/hb5646sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810038560/hb5646Isup2.hkl
The compound was synthesized by the literature method (Ragavan et al., 2010). Colourless blocks of (I) were obtained by recrystallization from absolute ethanol; m.pt. 356.1–357.2 K.
Carbon-bound H-atoms were placed in calculated positions (C—H 0.95 to 0.99 Å) and were included in the
in the riding model approximation, with Uiso(H) set to 1.2 to 1.5Uequiv(C). In the final two low angle reflections evidently effected by the beam stop were omitted, i.e. (010) and (001).Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).C25H26ClFN4O3 | Z = 2 |
Mr = 484.95 | F(000) = 508 |
Triclinic, P1 | Dx = 1.380 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.0568 (5) Å | Cell parameters from 3796 reflections |
b = 12.0047 (10) Å | θ = 3.0–30.6° |
c = 16.2615 (13) Å | µ = 0.21 mm−1 |
α = 88.852 (1)° | T = 100 K |
β = 81.206 (1)° | Block, colourless |
γ = 87.644 (1)° | 0.35 × 0.10 × 0.10 mm |
V = 1167.37 (17) Å3 |
Bruker SMART APEX diffractometer | 5318 independent reflections |
Radiation source: fine-focus sealed tube | 4351 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
ω scan | θmax = 27.5°, θmin = 2.1° |
Absorption correction: analytical (FACES; Bruker, 2009) | h = −7→7 |
Tmin = 0.931, Tmax = 0.980 | k = −15→15 |
11213 measured reflections | l = −21→21 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.145 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0829P)2 + 0.4102P] where P = (Fo2 + 2Fc2)/3 |
5318 reflections | (Δ/σ)max = 0.001 |
310 parameters | Δρmax = 0.37 e Å−3 |
0 restraints | Δρmin = −0.39 e Å−3 |
C25H26ClFN4O3 | γ = 87.644 (1)° |
Mr = 484.95 | V = 1167.37 (17) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.0568 (5) Å | Mo Kα radiation |
b = 12.0047 (10) Å | µ = 0.21 mm−1 |
c = 16.2615 (13) Å | T = 100 K |
α = 88.852 (1)° | 0.35 × 0.10 × 0.10 mm |
β = 81.206 (1)° |
Bruker SMART APEX diffractometer | 5318 independent reflections |
Absorption correction: analytical (FACES; Bruker, 2009) | 4351 reflections with I > 2σ(I) |
Tmin = 0.931, Tmax = 0.980 | Rint = 0.030 |
11213 measured reflections |
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.145 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.37 e Å−3 |
5318 reflections | Δρmin = −0.39 e Å−3 |
310 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | −0.54699 (8) | 0.35562 (4) | 0.36749 (3) | 0.02774 (15) | |
F1 | −0.3361 (2) | 0.60200 (11) | 0.83637 (8) | 0.0351 (3) | |
O1 | 0.6767 (2) | −0.00368 (11) | 0.59753 (8) | 0.0216 (3) | |
O2 | 0.6127 (2) | −0.13676 (12) | 1.00046 (8) | 0.0223 (3) | |
O3 | 0.9285 (2) | −0.21367 (11) | 0.92542 (8) | 0.0186 (3) | |
N1 | 0.1504 (2) | 0.26137 (12) | 0.66173 (9) | 0.0155 (3) | |
N2 | 0.3142 (2) | 0.20929 (13) | 0.69823 (10) | 0.0167 (3) | |
N3 | 0.6639 (2) | 0.04516 (13) | 0.73200 (9) | 0.0150 (3) | |
N4 | 0.6836 (3) | −0.11496 (14) | 0.86022 (10) | 0.0202 (3) | |
C1 | 0.0220 (3) | 0.35009 (14) | 0.70660 (10) | 0.0148 (3) | |
C2 | 0.1251 (3) | 0.44859 (15) | 0.71731 (11) | 0.0174 (4) | |
H2 | 0.2778 | 0.4572 | 0.6948 | 0.021* | |
C3 | 0.0030 (3) | 0.53487 (16) | 0.76141 (12) | 0.0225 (4) | |
H3 | 0.0699 | 0.6033 | 0.7692 | 0.027* | |
C4 | −0.2166 (3) | 0.51834 (17) | 0.79337 (12) | 0.0226 (4) | |
C5 | −0.3210 (3) | 0.42072 (17) | 0.78344 (12) | 0.0213 (4) | |
H5 | −0.4732 | 0.4122 | 0.8067 | 0.026* | |
C6 | −0.2004 (3) | 0.33534 (16) | 0.73909 (11) | 0.0183 (4) | |
H6 | −0.2690 | 0.2675 | 0.7310 | 0.022* | |
C7 | −0.0359 (3) | 0.25317 (15) | 0.53333 (11) | 0.0154 (4) | |
C8 | −0.1139 (3) | 0.36381 (15) | 0.52973 (11) | 0.0180 (4) | |
H8 | −0.0618 | 0.4178 | 0.5634 | 0.022* | |
C9 | −0.2670 (3) | 0.39586 (16) | 0.47737 (12) | 0.0199 (4) | |
H9 | −0.3181 | 0.4715 | 0.4747 | 0.024* | |
C10 | −0.3444 (3) | 0.31675 (16) | 0.42920 (11) | 0.0183 (4) | |
C11 | −0.2662 (3) | 0.20696 (16) | 0.43007 (12) | 0.0212 (4) | |
H11 | −0.3183 | 0.1535 | 0.3960 | 0.025* | |
C12 | −0.1106 (3) | 0.17607 (16) | 0.48145 (11) | 0.0188 (4) | |
H12 | −0.0536 | 0.1011 | 0.4814 | 0.023* | |
C13 | 0.1254 (3) | 0.21355 (14) | 0.58746 (11) | 0.0147 (3) | |
C14 | 0.2801 (3) | 0.12616 (15) | 0.57692 (11) | 0.0166 (4) | |
H14 | 0.3060 | 0.0757 | 0.5319 | 0.020* | |
C15 | 0.3920 (3) | 0.12677 (14) | 0.64627 (11) | 0.0150 (3) | |
C16 | 0.5851 (3) | 0.04965 (14) | 0.65783 (11) | 0.0149 (3) | |
C17 | 0.5275 (3) | 0.06276 (15) | 0.81360 (11) | 0.0168 (4) | |
H17A | 0.3856 | 0.1031 | 0.8066 | 0.020* | |
H17B | 0.6083 | 0.1087 | 0.8482 | 0.020* | |
C18 | 0.4778 (3) | −0.04902 (16) | 0.85671 (12) | 0.0194 (4) | |
H18A | 0.3988 | −0.0365 | 0.9139 | 0.023* | |
H18B | 0.3788 | −0.0904 | 0.8261 | 0.023* | |
C19 | 0.8221 (3) | −0.13264 (16) | 0.77930 (11) | 0.0190 (4) | |
H19A | 0.7429 | −0.1786 | 0.7441 | 0.023* | |
H19B | 0.9640 | −0.1726 | 0.7869 | 0.023* | |
C20 | 0.8709 (3) | −0.02034 (16) | 0.73720 (11) | 0.0180 (4) | |
H20A | 0.9664 | 0.0214 | 0.7690 | 0.022* | |
H20B | 0.9537 | −0.0320 | 0.6805 | 0.022* | |
C21 | 0.7328 (3) | −0.15410 (15) | 0.93439 (11) | 0.0165 (4) | |
C22 | 1.0055 (3) | −0.26720 (16) | 0.99898 (11) | 0.0191 (4) | |
C23 | 1.2187 (3) | −0.32815 (17) | 0.96125 (13) | 0.0250 (4) | |
H23A | 1.1842 | −0.3848 | 0.9231 | 0.038* | |
H23B | 1.2900 | −0.3642 | 1.0056 | 0.038* | |
H23C | 1.3205 | −0.2750 | 0.9306 | 0.038* | |
C24 | 0.8349 (3) | −0.34893 (18) | 1.03985 (14) | 0.0285 (5) | |
H24A | 0.7967 | −0.3989 | 0.9977 | 0.043* | |
H24B | 0.6998 | −0.3076 | 1.0655 | 0.043* | |
H24C | 0.8984 | −0.3928 | 1.0826 | 0.043* | |
C25 | 1.0532 (3) | −0.17857 (18) | 1.05902 (12) | 0.0236 (4) | |
H25A | 1.1630 | −0.1278 | 1.0301 | 0.035* | |
H25B | 1.1128 | −0.2146 | 1.1061 | 0.035* | |
H25C | 0.9145 | −0.1363 | 1.0795 | 0.035* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0254 (3) | 0.0297 (3) | 0.0319 (3) | −0.0024 (2) | −0.0172 (2) | 0.0069 (2) |
F1 | 0.0380 (7) | 0.0319 (7) | 0.0337 (7) | 0.0169 (6) | −0.0032 (6) | −0.0137 (6) |
O1 | 0.0250 (7) | 0.0246 (7) | 0.0150 (6) | 0.0078 (6) | −0.0038 (5) | −0.0048 (5) |
O2 | 0.0206 (7) | 0.0289 (7) | 0.0157 (7) | 0.0027 (5) | 0.0011 (5) | 0.0025 (6) |
O3 | 0.0179 (6) | 0.0224 (7) | 0.0154 (6) | 0.0036 (5) | −0.0036 (5) | 0.0020 (5) |
N1 | 0.0174 (7) | 0.0153 (7) | 0.0146 (7) | 0.0012 (6) | −0.0054 (6) | 0.0004 (6) |
N2 | 0.0159 (7) | 0.0155 (7) | 0.0192 (8) | 0.0029 (6) | −0.0057 (6) | 0.0019 (6) |
N3 | 0.0150 (7) | 0.0178 (7) | 0.0117 (7) | 0.0035 (6) | −0.0017 (5) | 0.0005 (6) |
N4 | 0.0211 (8) | 0.0230 (8) | 0.0148 (7) | 0.0073 (6) | −0.0001 (6) | 0.0034 (6) |
C1 | 0.0170 (8) | 0.0150 (8) | 0.0123 (8) | 0.0057 (6) | −0.0037 (6) | −0.0006 (6) |
C2 | 0.0180 (8) | 0.0198 (9) | 0.0147 (8) | −0.0006 (7) | −0.0031 (7) | 0.0003 (7) |
C3 | 0.0299 (10) | 0.0169 (9) | 0.0221 (9) | 0.0012 (8) | −0.0090 (8) | −0.0037 (7) |
C4 | 0.0274 (10) | 0.0216 (10) | 0.0185 (9) | 0.0107 (8) | −0.0049 (8) | −0.0044 (7) |
C5 | 0.0173 (9) | 0.0276 (10) | 0.0182 (9) | 0.0042 (7) | −0.0018 (7) | 0.0011 (8) |
C6 | 0.0197 (9) | 0.0179 (9) | 0.0178 (9) | 0.0005 (7) | −0.0043 (7) | 0.0002 (7) |
C7 | 0.0141 (8) | 0.0172 (9) | 0.0145 (8) | 0.0000 (6) | −0.0015 (6) | 0.0024 (7) |
C8 | 0.0202 (9) | 0.0176 (9) | 0.0166 (8) | −0.0001 (7) | −0.0040 (7) | −0.0003 (7) |
C9 | 0.0211 (9) | 0.0193 (9) | 0.0194 (9) | 0.0007 (7) | −0.0043 (7) | 0.0024 (7) |
C10 | 0.0150 (8) | 0.0245 (10) | 0.0157 (8) | 0.0009 (7) | −0.0048 (7) | 0.0044 (7) |
C11 | 0.0236 (9) | 0.0215 (10) | 0.0203 (9) | −0.0035 (7) | −0.0083 (7) | −0.0007 (7) |
C12 | 0.0226 (9) | 0.0185 (9) | 0.0153 (8) | 0.0005 (7) | −0.0037 (7) | 0.0007 (7) |
C13 | 0.0161 (8) | 0.0147 (8) | 0.0134 (8) | −0.0002 (6) | −0.0023 (6) | −0.0005 (6) |
C14 | 0.0185 (8) | 0.0160 (9) | 0.0155 (8) | −0.0010 (7) | −0.0033 (7) | 0.0002 (7) |
C15 | 0.0160 (8) | 0.0127 (8) | 0.0162 (8) | 0.0017 (6) | −0.0028 (7) | 0.0000 (7) |
C16 | 0.0159 (8) | 0.0139 (8) | 0.0148 (8) | −0.0005 (6) | −0.0019 (6) | 0.0005 (7) |
C17 | 0.0184 (8) | 0.0183 (9) | 0.0126 (8) | 0.0042 (7) | −0.0004 (7) | −0.0016 (7) |
C18 | 0.0167 (8) | 0.0233 (10) | 0.0169 (9) | 0.0040 (7) | −0.0008 (7) | 0.0039 (7) |
C19 | 0.0210 (9) | 0.0204 (9) | 0.0141 (8) | 0.0087 (7) | −0.0006 (7) | −0.0021 (7) |
C20 | 0.0142 (8) | 0.0243 (10) | 0.0152 (8) | 0.0043 (7) | −0.0024 (7) | 0.0013 (7) |
C21 | 0.0160 (8) | 0.0139 (8) | 0.0199 (9) | 0.0003 (6) | −0.0039 (7) | 0.0001 (7) |
C22 | 0.0194 (9) | 0.0220 (9) | 0.0167 (9) | 0.0008 (7) | −0.0061 (7) | 0.0041 (7) |
C23 | 0.0226 (10) | 0.0252 (10) | 0.0276 (10) | 0.0059 (8) | −0.0070 (8) | 0.0011 (8) |
C24 | 0.0262 (10) | 0.0279 (11) | 0.0319 (11) | −0.0026 (8) | −0.0070 (9) | 0.0127 (9) |
C25 | 0.0196 (9) | 0.0335 (11) | 0.0175 (9) | 0.0018 (8) | −0.0030 (7) | −0.0020 (8) |
Cl1—C10 | 1.7439 (18) | C9—H9 | 0.9500 |
F1—C4 | 1.355 (2) | C10—C11 | 1.383 (3) |
O1—C16 | 1.228 (2) | C11—C12 | 1.387 (2) |
O2—C21 | 1.218 (2) | C11—H11 | 0.9500 |
O3—C21 | 1.349 (2) | C12—H12 | 0.9500 |
O3—C22 | 1.475 (2) | C13—C14 | 1.373 (2) |
N1—N2 | 1.357 (2) | C14—C15 | 1.402 (2) |
N1—C13 | 1.379 (2) | C14—H14 | 0.9500 |
N1—C1 | 1.436 (2) | C15—C16 | 1.494 (2) |
N2—C15 | 1.338 (2) | C17—C18 | 1.521 (3) |
N3—C16 | 1.363 (2) | C17—H17A | 0.9900 |
N3—C20 | 1.465 (2) | C17—H17B | 0.9900 |
N3—C17 | 1.466 (2) | C18—H18A | 0.9900 |
N4—C21 | 1.356 (2) | C18—H18B | 0.9900 |
N4—C18 | 1.457 (2) | C19—C20 | 1.519 (3) |
N4—C19 | 1.463 (2) | C19—H19A | 0.9900 |
C1—C6 | 1.387 (3) | C19—H19B | 0.9900 |
C1—C2 | 1.386 (2) | C20—H20A | 0.9900 |
C2—C3 | 1.392 (3) | C20—H20B | 0.9900 |
C2—H2 | 0.9500 | C22—C23 | 1.509 (3) |
C3—C4 | 1.373 (3) | C22—C24 | 1.523 (3) |
C3—H3 | 0.9500 | C22—C25 | 1.524 (3) |
C4—C5 | 1.378 (3) | C23—H23A | 0.9800 |
C5—C6 | 1.382 (3) | C23—H23B | 0.9800 |
C5—H5 | 0.9500 | C23—H23C | 0.9800 |
C6—H6 | 0.9500 | C24—H24A | 0.9800 |
C7—C8 | 1.394 (3) | C24—H24B | 0.9800 |
C7—C12 | 1.398 (2) | C24—H24C | 0.9800 |
C7—C13 | 1.471 (2) | C25—H25A | 0.9800 |
C8—C9 | 1.390 (2) | C25—H25B | 0.9800 |
C8—H8 | 0.9500 | C25—H25C | 0.9800 |
C9—C10 | 1.384 (3) | ||
C21—O3—C22 | 119.64 (14) | C14—C15—C16 | 124.05 (16) |
N2—N1—C13 | 112.50 (14) | O1—C16—N3 | 121.74 (16) |
N2—N1—C1 | 117.44 (14) | O1—C16—C15 | 118.02 (15) |
C13—N1—C1 | 129.91 (14) | N3—C16—C15 | 120.11 (15) |
C15—N2—N1 | 104.23 (14) | N3—C17—C18 | 109.81 (14) |
C16—N3—C20 | 118.19 (14) | N3—C17—H17A | 109.7 |
C16—N3—C17 | 125.08 (14) | C18—C17—H17A | 109.7 |
C20—N3—C17 | 112.72 (14) | N3—C17—H17B | 109.7 |
C21—N4—C18 | 120.10 (15) | C18—C17—H17B | 109.7 |
C21—N4—C19 | 125.57 (15) | H17A—C17—H17B | 108.2 |
C18—N4—C19 | 114.33 (14) | N4—C18—C17 | 110.80 (15) |
C6—C1—C2 | 121.44 (16) | N4—C18—H18A | 109.5 |
C6—C1—N1 | 119.72 (16) | C17—C18—H18A | 109.5 |
C2—C1—N1 | 118.84 (16) | N4—C18—H18B | 109.5 |
C1—C2—C3 | 119.41 (17) | C17—C18—H18B | 109.5 |
C1—C2—H2 | 120.3 | H18A—C18—H18B | 108.1 |
C3—C2—H2 | 120.3 | N4—C19—C20 | 109.09 (15) |
C4—C3—C2 | 118.21 (18) | N4—C19—H19A | 109.9 |
C4—C3—H3 | 120.9 | C20—C19—H19A | 109.9 |
C2—C3—H3 | 120.9 | N4—C19—H19B | 109.9 |
F1—C4—C3 | 118.44 (18) | C20—C19—H19B | 109.9 |
F1—C4—C5 | 118.57 (18) | H19A—C19—H19B | 108.3 |
C3—C4—C5 | 122.99 (18) | N3—C20—C19 | 111.15 (14) |
C4—C5—C6 | 118.84 (18) | N3—C20—H20A | 109.4 |
C4—C5—H5 | 120.6 | C19—C20—H20A | 109.4 |
C6—C5—H5 | 120.6 | N3—C20—H20B | 109.4 |
C5—C6—C1 | 119.12 (17) | C19—C20—H20B | 109.4 |
C5—C6—H6 | 120.4 | H20A—C20—H20B | 108.0 |
C1—C6—H6 | 120.4 | O2—C21—O3 | 124.94 (16) |
C8—C7—C12 | 118.48 (16) | O2—C21—N4 | 123.32 (17) |
C8—C7—C13 | 123.44 (16) | O3—C21—N4 | 111.74 (15) |
C12—C7—C13 | 118.06 (16) | O3—C22—C23 | 102.28 (14) |
C9—C8—C7 | 120.63 (17) | O3—C22—C24 | 110.27 (15) |
C9—C8—H8 | 119.7 | C23—C22—C24 | 110.76 (17) |
C7—C8—H8 | 119.7 | O3—C22—C25 | 109.96 (15) |
C10—C9—C8 | 119.52 (17) | C23—C22—C25 | 110.84 (16) |
C10—C9—H9 | 120.2 | C24—C22—C25 | 112.29 (17) |
C8—C9—H9 | 120.2 | C22—C23—H23A | 109.5 |
C11—C10—C9 | 121.10 (16) | C22—C23—H23B | 109.5 |
C11—C10—Cl1 | 119.40 (14) | H23A—C23—H23B | 109.5 |
C9—C10—Cl1 | 119.49 (14) | C22—C23—H23C | 109.5 |
C10—C11—C12 | 118.99 (17) | H23A—C23—H23C | 109.5 |
C10—C11—H11 | 120.5 | H23B—C23—H23C | 109.5 |
C12—C11—H11 | 120.5 | C22—C24—H24A | 109.5 |
C11—C12—C7 | 121.22 (17) | C22—C24—H24B | 109.5 |
C11—C12—H12 | 119.4 | H24A—C24—H24B | 109.5 |
C7—C12—H12 | 119.4 | C22—C24—H24C | 109.5 |
C14—C13—N1 | 105.62 (15) | H24A—C24—H24C | 109.5 |
C14—C13—C7 | 129.58 (16) | H24B—C24—H24C | 109.5 |
N1—C13—C7 | 124.79 (16) | C22—C25—H25A | 109.5 |
C13—C14—C15 | 105.83 (16) | C22—C25—H25B | 109.5 |
C13—C14—H14 | 127.1 | H25A—C25—H25B | 109.5 |
C15—C14—H14 | 127.1 | C22—C25—H25C | 109.5 |
N2—C15—C14 | 111.80 (15) | H25A—C25—H25C | 109.5 |
N2—C15—C16 | 124.02 (15) | H25B—C25—H25C | 109.5 |
C13—N1—N2—C15 | −0.52 (19) | N1—C13—C14—C15 | −0.33 (19) |
C1—N1—N2—C15 | 175.46 (15) | C7—C13—C14—C15 | 179.05 (17) |
N2—N1—C1—C6 | −110.40 (18) | N1—N2—C15—C14 | 0.29 (19) |
C13—N1—C1—C6 | 64.8 (2) | N1—N2—C15—C16 | 176.34 (16) |
N2—N1—C1—C2 | 68.8 (2) | C13—C14—C15—N2 | 0.0 (2) |
C13—N1—C1—C2 | −116.1 (2) | C13—C14—C15—C16 | −176.02 (16) |
C6—C1—C2—C3 | −0.2 (3) | C20—N3—C16—O1 | 3.6 (3) |
N1—C1—C2—C3 | −179.36 (16) | C17—N3—C16—O1 | −152.18 (17) |
C1—C2—C3—C4 | 0.5 (3) | C20—N3—C16—C15 | −172.10 (15) |
C2—C3—C4—F1 | 179.97 (16) | C17—N3—C16—C15 | 32.1 (2) |
C2—C3—C4—C5 | −0.3 (3) | N2—C15—C16—O1 | −162.19 (17) |
F1—C4—C5—C6 | 179.53 (16) | C14—C15—C16—O1 | 13.4 (3) |
C3—C4—C5—C6 | −0.3 (3) | N2—C15—C16—N3 | 13.6 (3) |
C4—C5—C6—C1 | 0.5 (3) | C14—C15—C16—N3 | −170.78 (16) |
C2—C1—C6—C5 | −0.3 (3) | C16—N3—C17—C18 | 101.11 (19) |
N1—C1—C6—C5 | 178.85 (15) | C20—N3—C17—C18 | −55.79 (19) |
C12—C7—C8—C9 | 1.7 (3) | C21—N4—C18—C17 | 124.53 (18) |
C13—C7—C8—C9 | −179.81 (17) | C19—N4—C18—C17 | −55.4 (2) |
C7—C8—C9—C10 | 0.8 (3) | N3—C17—C18—N4 | 53.54 (19) |
C8—C9—C10—C11 | −2.3 (3) | C21—N4—C19—C20 | −124.91 (19) |
C8—C9—C10—Cl1 | 176.78 (14) | C18—N4—C19—C20 | 55.0 (2) |
C9—C10—C11—C12 | 1.2 (3) | C16—N3—C20—C19 | −101.57 (18) |
Cl1—C10—C11—C12 | −177.88 (14) | C17—N3—C20—C19 | 57.07 (19) |
C10—C11—C12—C7 | 1.4 (3) | N4—C19—C20—N3 | −54.33 (19) |
C8—C7—C12—C11 | −2.9 (3) | C22—O3—C21—O2 | 2.6 (3) |
C13—C7—C12—C11 | 178.60 (17) | C22—O3—C21—N4 | −177.38 (15) |
N2—N1—C13—C14 | 0.5 (2) | C18—N4—C21—O2 | −0.3 (3) |
C1—N1—C13—C14 | −174.80 (17) | C19—N4—C21—O2 | 179.57 (17) |
N2—N1—C13—C7 | −178.88 (16) | C18—N4—C21—O3 | 179.63 (15) |
C1—N1—C13—C7 | 5.8 (3) | C19—N4—C21—O3 | −0.5 (3) |
C8—C7—C13—C14 | −151.42 (19) | C21—O3—C22—C23 | 177.25 (15) |
C12—C7—C13—C14 | 27.0 (3) | C21—O3—C22—C24 | 59.4 (2) |
C8—C7—C13—N1 | 27.9 (3) | C21—O3—C22—C25 | −64.9 (2) |
C12—C7—C13—N1 | −153.69 (17) |
D—H···A | D—H | H···A | D···A | D—H···A |
C17—H17a···N2 | 0.99 | 2.24 | 2.950 (2) | 128 |
C14—H14···O1i | 0.95 | 2.28 | 3.192 (2) | 161 |
C18—H18a···O2ii | 0.99 | 2.52 | 3.223 (2) | 128 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+1, −y, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C25H26ClFN4O3 |
Mr | 484.95 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 6.0568 (5), 12.0047 (10), 16.2615 (13) |
α, β, γ (°) | 88.852 (1), 81.206 (1), 87.644 (1) |
V (Å3) | 1167.37 (17) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.21 |
Crystal size (mm) | 0.35 × 0.10 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART APEX diffractometer |
Absorption correction | Analytical (FACES; Bruker, 2009) |
Tmin, Tmax | 0.931, 0.980 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11213, 5318, 4351 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.145, 1.06 |
No. of reflections | 5318 |
No. of parameters | 310 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.37, −0.39 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
C17—H17a···N2 | 0.99 | 2.24 | 2.950 (2) | 128 |
C14—H14···O1i | 0.95 | 2.28 | 3.192 (2) | 161 |
C18—H18a···O2ii | 0.99 | 2.52 | 3.223 (2) | 128 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+1, −y, −z+2. |
Footnotes
‡Additional correspondence author, e-mail: kvpsvijayakumar@gmail.com.
Acknowledgements
VV is grateful to the DST, India, for funding through the Young Scientist Scheme (Fast Track Proposal). The authors are also grateful to the University of Malaya for support of the crystallographic facility.
References
Brandenburg, K. (2006). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Bruker (2009). FACES, APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Ragavan, R. V., Vijayakumar, V. & Kumari, N. S. (2009). Eur. J. Med. Chem. 44, 3852–3857. PubMed CAS Google Scholar
Ragavan, R. V., Vijayakumar, V. & Kumari, N. S. (2010). Eur. J. Med. Chem. 45, 1173–1180. Web of Science CrossRef CAS PubMed Google Scholar
Samshuddin, S., Narayana, B., Yathirajan, H. S., Safwan, A. P. & Tiekink, E. R. T. (2010). Acta Cryst. E66, o1279–o1280. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The anti-bacterial and anti-fungal activities of the azoles are well known and some derivatives are used clinically as anti-microbial agents. However, the emergence of azole-resistant strains of microbes requires the development of new anti-microbial compounds. Pyrazole forms an important class of heterocyclic compounds and many pyrazole derivatives are reported to display a broad spectrum of biological activities, such as anti-inflammatory, anti-fungal, herbicidal, anti-tumour, cytotoxic, and anti-viral activities. Since the high electronegativity of halogens (particularly chlorine and fluorine) in aromatic rings of drug molecules plays an important role in enhancing biological activity, we are interested to have 4-fluoro or 4-chloro substitution in the aryl rings of 1,5-diaryl pyrazoles. As part of our on-going research aimed at the synthesis of new anti-microbial compounds based on pyrazole (Ragavan et al., 2009, 2010) and reflecting our interest in pyrazole structures (Samshuddin et al., 2010), herein we report the crystallographic characterization of a novel pyrazole derivative, (I).
The pyrazole ring in (I), Fig. 1, is planar (r.m.s. deviation = 0.003 Å) and is connected to two halo-substituted benzene rings. Whereas the chloro-substituted ring is slightly twisted out of the plane of the pyrazoyl ring [dihedral angle = 27.63 (10) °], the fluoro-substituted ring is almost orthogonal [dihedral angle = 67.62 (10) °]; the dihedral angle between the two benzene rings = 64.54 (9) °. The ester derivatized piperazine ring (with a chair conformation) is linked to the pyrazoyl ring via a carbonyl spacer [the N2—C15—C16—N3 torsion angle = 13.6 (3) °] and is orientated to lie to one side of the pyrazoyl plane. Finally, the ester group is co-planar with the C18—N4—C19 plane as seen in the C18—N4—C21—O2 torsion angle of -0.3 (3) °.
In addition to an intramolecular C—H···N bond, there are two significant intermolecular C—H···O contacts of note, Table 1. The latter lead to the formation of an undulating supramolecular chain along the c axis comprising alternating centrosymmetric 10-membered {···HCNCO}2 and {···HC3O}2 synthons, Fig. 2. Chains pack in the ac plane and these stack along the b axis, Fig. 3.