organic compounds
2-(Phenylcarbonothioylsulfanyl)acetic acid
aDepartamento de Química – Facultad de Ciencias, Universidad del Valle, Apartado 25360, Santiago de Cali, Colombia, and bInstituto de Física, IFSC, Universidade de São Paulo, São Carlos, Brazil
*Correspondence e-mail: rodimo26@yahoo.es
The title compound, C9H8O2S2, can be used as a agent and may be used to control the behavior of polymerization reactions. O—H⋯O hydrogen bonds of moderate character link the molecules into dimers. In the crystal, the dimers are linked into sheets by C—H⋯O interactions, forming R42(12) and R22(8) edge-fused rings running parallel to [101]. There are no intermolecular interactions involving the S atoms.
Related literature
For the use of dithiocarbonyl components as et al. (1999); Davis (2004). For related structures, see: Adiwidjaja & Voss (1977); Liang et al. (2008). For hydrogen bonding, see: Etter (1990); Nardelli (1995); Emsley (1984). For a description of the Cambridge Structural Database, see: Allen (2002).
agents in polymerization reactions, see: MayadunneExperimental
Crystal data
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Refinement
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Data collection: COLLECT (Nonius, 1998); cell SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO (Otwinowski & Minor, 1997) and SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S160053681003686X/jh2203sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681003686X/jh2203Isup2.hkl
Synthesis of 2-(phenylcarbonothioylthio)acetic acid: 12.56 g (0.08 mol) of bromobenzene was added dropwise to a solution of 50 ml of dry THF, 2.00 g (0.08 mol) of magnesium stirrings and a crystal of iodine. Once the reaction was finished, 6.09 g (0.08 mol) of CS2 were added and a dark violet solution was obtained after stirring for 2 h at room temperature. Then, a solution of 7.56 g (0.08 mol) of chloroacetic acid in 200 ml of water, was prepared and neutralized with 6.72 g (0.08 mol) of solid sodium bicarbonate, which was rapidly added through the condenser, the mixture was stirred, brought to boiling and left refluxing for 5 minutes. The resulting brownish red suspension was added to 500 g of cold water and the resulting solution was slowly acidified under stirring with concentrated hydrochloric acid. A deep-scarlet crystalline precipitate was collected after 30 minutes at 0°C, rinsed with water and then crystallized in chloroform obtaining a red solid (9.17 g, 54% yield).
1H (400 MHz) Solvent: CDCl3 NMR (p.p.m.) δ: 4.30 (s, 2 H, –CH2), 7.43 (t, 2H, m-ArH, J = 8 Hz) 7.59 (t, 1H, p-ArH, J = 8 Hz), 8.07 (d, 2H, o-ArH, J = 8 Hz), 9.14 (s, 1H, –OH).
IR: (KBr) 3200–2800 –COOH; 3000–2850, –CH; 1700, C=O; 1050, C=S.
All non-hydrogen atoms were identified by
The H atoms were all located in a difference map, but those attached to carbon atoms were repositioned geometrically. The H atoms were initially refined with soft restraints on the bond lengths and angles to regularize their geometry. (C—H in the range 0.93–0.97 A°) and Uiso(H) (in the range 1.2–1.5 times Ueq of the parent atom). After this, the positions were refined with riding constraints.Data collection: COLLECT (Nonius, 1998); cell
SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO (Otwinowski & Minor, 1997) and SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).C9H8O2S2 | F(000) = 440 |
Mr = 212.29 | Dx = 1.467 Mg m−3 |
Monoclinic, P21/c | Melting point: 399(1) K |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 13.1565 (7) Å | Cell parameters from 3433 reflections |
b = 4.9522 (2) Å | θ = 2.9–27.5° |
c = 17.3747 (7) Å | µ = 0.52 mm−1 |
β = 121.870 (3)° | T = 291 K |
V = 961.37 (8) Å3 | Prism, red |
Z = 4 | 0.26 × 0.22 × 0.16 mm |
Bruker–Nonius KappaCCD diffractometer | 2131 independent reflections |
Radiation source: fine-focus sealed tube | 1682 reflections with I > 2σ(I) |
Horizonally mounted graphite crystal monochromator | Rint = 0.063 |
Detector resolution: 9 pixels mm-1 | θmax = 27.5°, θmin = 3.2° |
CCD scans | h = −17→16 |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | k = −5→6 |
Tmin = 0.863, Tmax = 0.916 | l = −22→17 |
5647 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.148 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0898P)2 + 0.0835P] where P = (Fo2 + 2Fc2)/3 |
2131 reflections | (Δ/σ)max < 0.001 |
118 parameters | Δρmax = 0.23 e Å−3 |
0 restraints | Δρmin = −0.42 e Å−3 |
C9H8O2S2 | V = 961.37 (8) Å3 |
Mr = 212.29 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 13.1565 (7) Å | µ = 0.52 mm−1 |
b = 4.9522 (2) Å | T = 291 K |
c = 17.3747 (7) Å | 0.26 × 0.22 × 0.16 mm |
β = 121.870 (3)° |
Bruker–Nonius KappaCCD diffractometer | 2131 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1682 reflections with I > 2σ(I) |
Tmin = 0.863, Tmax = 0.916 | Rint = 0.063 |
5647 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.148 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.23 e Å−3 |
2131 reflections | Δρmin = −0.42 e Å−3 |
118 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S2 | 0.36260 (5) | 0.16659 (12) | 0.68630 (3) | 0.0659 (2) | |
S1 | 0.15902 (5) | −0.03907 (14) | 0.51228 (4) | 0.0750 (3) | |
O1 | 0.47853 (15) | −0.0386 (3) | 0.58577 (12) | 0.0719 (4) | |
C1 | 0.19825 (17) | −0.1776 (3) | 0.67884 (13) | 0.0517 (4) | |
O2 | 0.40702 (16) | 0.2866 (3) | 0.48242 (12) | 0.0784 (5) | |
H22 | 0.4350 | 0.1905 | 0.4597 | 0.118* | |
C7 | 0.23335 (16) | −0.0269 (4) | 0.62278 (13) | 0.0528 (4) | |
C6 | 0.11223 (19) | −0.3787 (5) | 0.64001 (15) | 0.0647 (5) | |
H6 | 0.0759 | −0.4163 | 0.5785 | 0.078* | |
C9 | 0.42419 (18) | 0.1733 (4) | 0.55576 (14) | 0.0576 (5) | |
C8 | 0.3752 (2) | 0.3384 (4) | 0.60136 (17) | 0.0686 (6) | |
H8A | 0.2966 | 0.4038 | 0.5554 | 0.082* | |
H8B | 0.4264 | 0.4947 | 0.6289 | 0.082* | |
C2 | 0.2493 (2) | −0.1244 (5) | 0.77093 (13) | 0.0637 (5) | |
H2 | 0.3063 | 0.0116 | 0.7982 | 0.076* | |
C5 | 0.0800 (2) | −0.5241 (5) | 0.69193 (19) | 0.0737 (6) | |
H5 | 0.0228 | −0.6599 | 0.6651 | 0.088* | |
C3 | 0.2166 (2) | −0.2708 (5) | 0.82243 (15) | 0.0722 (6) | |
H3 | 0.2521 | −0.2345 | 0.8839 | 0.087* | |
C4 | 0.1313 (2) | −0.4702 (5) | 0.78224 (19) | 0.0737 (6) | |
H4 | 0.1086 | −0.5681 | 0.8165 | 0.088* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S2 | 0.0613 (4) | 0.0789 (4) | 0.0479 (3) | −0.0101 (2) | 0.0221 (3) | −0.0074 (2) |
S1 | 0.0703 (4) | 0.1042 (5) | 0.0390 (3) | −0.0052 (3) | 0.0210 (3) | −0.0069 (2) |
O1 | 0.0796 (10) | 0.0692 (9) | 0.0760 (11) | 0.0162 (8) | 0.0472 (9) | 0.0244 (7) |
C1 | 0.0490 (9) | 0.0562 (9) | 0.0446 (9) | 0.0059 (7) | 0.0210 (8) | −0.0078 (7) |
O2 | 0.0974 (12) | 0.0695 (9) | 0.0792 (11) | 0.0184 (8) | 0.0542 (10) | 0.0278 (8) |
C7 | 0.0506 (9) | 0.0583 (10) | 0.0434 (9) | 0.0086 (8) | 0.0207 (8) | −0.0054 (7) |
C6 | 0.0602 (11) | 0.0739 (12) | 0.0511 (11) | −0.0039 (10) | 0.0233 (9) | −0.0136 (9) |
C9 | 0.0550 (10) | 0.0556 (10) | 0.0573 (11) | −0.0045 (8) | 0.0263 (9) | 0.0085 (8) |
C8 | 0.0771 (14) | 0.0578 (11) | 0.0687 (13) | −0.0022 (10) | 0.0370 (12) | 0.0027 (9) |
C2 | 0.0667 (12) | 0.0718 (12) | 0.0462 (10) | −0.0068 (10) | 0.0255 (9) | −0.0115 (9) |
C5 | 0.0754 (14) | 0.0721 (13) | 0.0770 (16) | −0.0107 (11) | 0.0425 (13) | −0.0106 (11) |
C3 | 0.0836 (15) | 0.0831 (14) | 0.0525 (12) | 0.0008 (13) | 0.0378 (11) | −0.0039 (11) |
C4 | 0.0866 (15) | 0.0719 (13) | 0.0762 (16) | 0.0031 (11) | 0.0521 (14) | 0.0021 (11) |
S2—C7 | 1.745 (2) | C9—C8 | 1.500 (3) |
S2—C8 | 1.786 (2) | C8—H8A | 0.9700 |
S1—C7 | 1.6319 (19) | C8—H8B | 0.9700 |
O1—C9 | 1.221 (2) | C2—C3 | 1.385 (3) |
C1—C6 | 1.386 (3) | C2—H2 | 0.9300 |
C1—C2 | 1.395 (3) | C5—C4 | 1.368 (4) |
C1—C7 | 1.481 (3) | C5—H5 | 0.9300 |
O2—C9 | 1.298 (2) | C3—C4 | 1.376 (4) |
O2—H22 | 0.8200 | C3—H3 | 0.9300 |
C6—C5 | 1.385 (3) | C4—H4 | 0.9300 |
C6—H6 | 0.9300 | ||
C7—S2—C8 | 102.92 (10) | S2—C8—H8A | 108.4 |
C6—C1—C2 | 118.0 (2) | C9—C8—H8B | 108.4 |
C6—C1—C7 | 119.99 (18) | S2—C8—H8B | 108.4 |
C2—C1—C7 | 122.03 (18) | H8A—C8—H8B | 107.5 |
C9—O2—H22 | 109.5 | C3—C2—C1 | 121.1 (2) |
C1—C7—S1 | 123.62 (15) | C3—C2—H2 | 119.5 |
C1—C7—S2 | 113.50 (14) | C1—C2—H2 | 119.5 |
S1—C7—S2 | 122.88 (12) | C4—C5—C6 | 120.7 (2) |
C5—C6—C1 | 120.6 (2) | C4—C5—H5 | 119.7 |
C5—C6—H6 | 119.7 | C6—C5—H5 | 119.7 |
C1—C6—H6 | 119.7 | C4—C3—C2 | 119.7 (2) |
O1—C9—O2 | 123.3 (2) | C4—C3—H3 | 120.1 |
O1—C9—C8 | 124.10 (19) | C2—C3—H3 | 120.1 |
O2—C9—C8 | 112.49 (17) | C5—C4—C3 | 119.9 (2) |
C9—C8—S2 | 115.50 (14) | C5—C4—H4 | 120.0 |
C9—C8—H8A | 108.4 | C3—C4—H4 | 120.0 |
C6—C1—C7—S1 | 12.5 (2) | O2—C9—C8—S2 | 165.81 (16) |
C2—C1—C7—S1 | −167.52 (16) | C7—S2—C8—C9 | −78.01 (18) |
C6—C1—C7—S2 | −167.49 (14) | C6—C1—C2—C3 | 1.0 (3) |
C2—C1—C7—S2 | 12.5 (2) | C7—C1—C2—C3 | −178.9 (2) |
C8—S2—C7—C1 | −176.11 (13) | C1—C6—C5—C4 | 0.7 (4) |
C8—S2—C7—S1 | 3.88 (15) | C1—C2—C3—C4 | −0.8 (4) |
C2—C1—C6—C5 | −1.0 (3) | C6—C5—C4—C3 | −0.5 (4) |
C7—C1—C6—C5 | 178.96 (19) | C2—C3—C4—C5 | 0.5 (4) |
O1—C9—C8—S2 | −17.0 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H22···O1i | 0.82 | 1.85 | 2.658 (2) | 167 |
C8—H8B···O1ii | 0.97 | 2.63 | 3.439 (3) | 141 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) x, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | C9H8O2S2 |
Mr | 212.29 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 291 |
a, b, c (Å) | 13.1565 (7), 4.9522 (2), 17.3747 (7) |
β (°) | 121.870 (3) |
V (Å3) | 961.37 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.52 |
Crystal size (mm) | 0.26 × 0.22 × 0.16 |
Data collection | |
Diffractometer | Bruker–Nonius KappaCCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.863, 0.916 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5647, 2131, 1682 |
Rint | 0.063 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.148, 1.05 |
No. of reflections | 2131 |
No. of parameters | 118 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.23, −0.42 |
Computer programs: COLLECT (Nonius, 1998), DENZO (Otwinowski & Minor, 1997) and SCALEPACK (Otwinowski & Minor, 1997), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H22···O1i | 0.82 | 1.85 | 2.658 (2) | 167.1 |
C8—H8B···O1ii | 0.97 | 2.63 | 3.439 (3) | 141.1 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) x, y+1, z. |
Acknowledgements
RMF is grateful to the Spanish Research Council (CSIC) for the use of a free-of-charge licence to the Cambridge Structural Database (Allen, 2002). RMF and FZ also thank the Universidad del Valle, Colombia, and the Instituto de Física de São Carlos, USP, Brazil, for partial financial support.
References
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Controlled behavior in a polymerization reaction can be achieved with the presence of a dithiocarbonyl component, used as a chain transfer agent (CTA). These agents have the ability to react by changing the activity of a growing polymer to another molecule, producing new polymer chains (Mayadunne et al., 1999; Davis, 2004) and reducing the average molecular weight at the final polymer. Continuing research on these materials, the Polymer group of the Universidad of Valle, synthesized the 2-(phenylcarbonothioylthio) acetic acid molecule. A displacement ellipsoid plot of the title molecule with the atomic numbering scheme is shown in Figure 1. Carboxylic acids usually exist as dimeric pairs. Indeed, a hydrogen bond of moderate character (Emsley, 1984) between the O2 atom at (x,y,z) and the O1 atom at (1 - x,-y, 1 - z) in the title molecular complex is observed. The O2···O1 distance is 2.658 (3) Å and the O2—H2···O1 angle is 167.1 (2)°. The dimers of the title molecule, are linked into sheets by a weak C—H···O intermolecular interactions (Table 1)(Nardelli, 1995). Indeed, the C8 atom at (x,y,z) acts as hydrogen bond donor to carboxyl O1 atom in the molecule at (x, y + 1,z) forming R42(12) and R22(8) edge-fused rings (Etter, 1990) running parallel to the [101] direction (see Fig 2). The title compound shows a C1=S7 distance of 1.6319 (19) Å suggesting a double-bond character and C2—S7 and C2—S8 distances of 1.745 (2) and 1.786 (2) Å respectivelly, suggesting a single bond character. A dihedral angle of 12.37 (12)° between the plane formed by the atoms C8/S2/C7/S1 and the plane of benzene is observed. The behavior of these bond lengths is similar to that observed in the Methyl 4 - t-butyldithiobenzoate and methylene bis(dithiobenzoate) structures (Adiwidjaja & Voss, 1977; Liang et al., 2008). There are no intermolecular interactions from S atoms.