organic compounds
3-(4-Chlorophenylsulfinyl)-2,5-dimethyl-1-benzofuran
aDepartment of Chemistry, Dongeui University, San 24 Kaya-dong Busanjin-gu, Busan 614-714, Republic of Korea, and bDepartment of Chemistry, Pukyong National University, 599-1 Daeyeon 3-dong, Nam-gu, Busan 608-737, Republic of Korea
*Correspondence e-mail: uklee@pknu.ac.kr
In the 16H13ClO2S, the 4-chlorophenyl ring is oriented approximately perpendicular to the benzofuran ring plane [dihedral angle = 82.45 (5)°]. In the crystal, molecules are linked by weak intermolecular C—H⋯O and C—H⋯π interactions.
of the title compound, CRelated literature
For the structures of related 3-(4-fluorophenylsulfinyl)-2,5-dimethyl-1-benzofuran derivatives, see: Choi et al. (2010a,b).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536810035932/nc2196sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810035932/nc2196Isup2.hkl
77% 3-chloroperoxybenzoic acid (269 mg, 1.2 mmol) was added in small portions to a stirred solution of 3-(4-chlorophenylsulfanyl)-2,5-dimethyl-1-benzofuran (317 mg, 1.1 mmol) in dichloromethane (40 mL) at 273 K. After being stirred at room temperature for 4h, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated at reduced pressure. The residue was purified by
(hexane–ethyl acetate, 1:1 v/v) to afford the title compound as a colorless solid [yield 77%, m.p. 440–441 K; R/f = 0.71 (hexane–ethyl acetate, 1:1 v/v)]. Single crystals suitable for X-ray diffraction were prepared by slow evaporation of the solvent from a solution of the title compound in ethyl acetate at room temperature.All H atoms were positioned geometrically and refined using a riding model, with C—H = 0.93 Å for aryl, 0.97 Å for methyl H atoms. Uiso(H) = 1.2Ueq(C)for aryl and 1.5Ueq(C) for methyl H atoms.
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C16H13ClO2S | F(000) = 632 |
Mr = 304.77 | Dx = 1.412 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 8210 reflections |
a = 12.7673 (19) Å | θ = 2.5–28.3° |
b = 11.0206 (18) Å | µ = 0.41 mm−1 |
c = 11.1232 (17) Å | T = 173 K |
β = 113.674 (6)° | Block, colourless |
V = 1433.4 (4) Å3 | 0.50 × 0.30 × 0.20 mm |
Z = 4 |
Bruker SMART APEXII CCD diffractometer | 3542 independent reflections |
Radiation source: rotating anode | 3118 reflections with I > 2σ(I) |
Graphite multilayer monochromator | Rint = 0.029 |
Detector resolution: 10.0 pixels mm-1 | θmax = 28.4°, θmin = 1.7° |
ϕ and ω scans | h = −17→16 |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | k = −14→14 |
Tmin = 0.654, Tmax = 0.746 | l = −14→13 |
12779 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.036 | H-atom parameters constrained |
wR(F2) = 0.124 | w = 1/[σ2(Fo2) + (0.0772P)2 + 0.5141P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max = 0.001 |
3542 reflections | Δρmax = 0.31 e Å−3 |
184 parameters | Δρmin = −0.31 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.014 (2) |
C16H13ClO2S | V = 1433.4 (4) Å3 |
Mr = 304.77 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 12.7673 (19) Å | µ = 0.41 mm−1 |
b = 11.0206 (18) Å | T = 173 K |
c = 11.1232 (17) Å | 0.50 × 0.30 × 0.20 mm |
β = 113.674 (6)° |
Bruker SMART APEXII CCD diffractometer | 3542 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 3118 reflections with I > 2σ(I) |
Tmin = 0.654, Tmax = 0.746 | Rint = 0.029 |
12779 measured reflections |
R[F2 > 2σ(F2)] = 0.036 | 0 restraints |
wR(F2) = 0.124 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.31 e Å−3 |
3542 reflections | Δρmin = −0.31 e Å−3 |
184 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl | 0.76980 (4) | 0.23428 (4) | 0.27031 (4) | 0.04162 (15) | |
S | 0.92673 (3) | 0.68708 (4) | 0.64073 (4) | 0.02874 (14) | |
O1 | 0.66438 (10) | 0.90669 (11) | 0.50482 (12) | 0.0371 (3) | |
O2 | 0.95961 (10) | 0.64186 (13) | 0.77732 (11) | 0.0398 (3) | |
C1 | 0.79481 (13) | 0.76039 (14) | 0.59101 (14) | 0.0261 (3) | |
C2 | 0.69064 (12) | 0.71954 (15) | 0.60000 (14) | 0.0264 (3) | |
C3 | 0.65623 (13) | 0.61696 (16) | 0.64794 (15) | 0.0303 (3) | |
H3 | 0.7071 | 0.5536 | 0.6850 | 0.036* | |
C4 | 0.54444 (14) | 0.61099 (19) | 0.63938 (17) | 0.0386 (4) | |
C5 | 0.47007 (15) | 0.7081 (2) | 0.5827 (2) | 0.0485 (5) | |
H5 | 0.3956 | 0.7033 | 0.5772 | 0.058* | |
C6 | 0.50216 (16) | 0.8100 (2) | 0.5347 (2) | 0.0477 (5) | |
H6 | 0.4514 | 0.8734 | 0.4970 | 0.057* | |
C7 | 0.61371 (14) | 0.81344 (16) | 0.54552 (16) | 0.0333 (4) | |
C8 | 0.77512 (14) | 0.87155 (15) | 0.53477 (15) | 0.0315 (3) | |
C9 | 0.50414 (17) | 0.5015 (2) | 0.6895 (2) | 0.0520 (5) | |
H9A | 0.5632 | 0.4410 | 0.7170 | 0.078* | |
H9B | 0.4368 | 0.4692 | 0.6209 | 0.078* | |
H9C | 0.4867 | 0.5245 | 0.7627 | 0.078* | |
C10 | 0.84732 (19) | 0.95889 (18) | 0.50136 (19) | 0.0452 (4) | |
H10A | 0.8743 | 1.0205 | 0.5679 | 0.068* | |
H10B | 0.8031 | 0.9958 | 0.4181 | 0.068* | |
H10C | 0.9114 | 0.9170 | 0.4964 | 0.068* | |
C11 | 0.87780 (11) | 0.55732 (14) | 0.53501 (14) | 0.0253 (3) | |
C12 | 0.82630 (14) | 0.57394 (16) | 0.40013 (15) | 0.0319 (3) | |
H12 | 0.8142 | 0.6517 | 0.3646 | 0.038* | |
C13 | 0.79335 (14) | 0.47361 (16) | 0.31949 (15) | 0.0324 (3) | |
H13 | 0.7581 | 0.4831 | 0.2289 | 0.039* | |
C14 | 0.81304 (12) | 0.35892 (15) | 0.37406 (15) | 0.0272 (3) | |
C16 | 0.89862 (12) | 0.44303 (15) | 0.58916 (15) | 0.0293 (3) | |
H16 | 0.9347 | 0.4336 | 0.6797 | 0.035* | |
C15 | 0.86562 (14) | 0.34154 (16) | 0.50817 (16) | 0.0314 (3) | |
H15 | 0.8787 | 0.2637 | 0.5435 | 0.038* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl | 0.0453 (3) | 0.0364 (3) | 0.0423 (3) | −0.00681 (17) | 0.0167 (2) | −0.01106 (18) |
S | 0.0214 (2) | 0.0302 (2) | 0.0333 (2) | −0.00229 (13) | 0.00965 (15) | −0.00328 (15) |
O1 | 0.0419 (6) | 0.0266 (6) | 0.0358 (6) | 0.0078 (5) | 0.0084 (5) | −0.0007 (5) |
O2 | 0.0369 (6) | 0.0435 (7) | 0.0287 (6) | 0.0039 (5) | 0.0025 (5) | −0.0033 (5) |
C1 | 0.0274 (7) | 0.0247 (7) | 0.0260 (7) | 0.0000 (5) | 0.0106 (5) | −0.0024 (6) |
C2 | 0.0236 (6) | 0.0305 (8) | 0.0239 (6) | 0.0025 (5) | 0.0084 (5) | −0.0040 (6) |
C3 | 0.0254 (7) | 0.0368 (9) | 0.0285 (7) | −0.0012 (6) | 0.0106 (6) | −0.0007 (6) |
C4 | 0.0296 (8) | 0.0552 (12) | 0.0337 (8) | −0.0072 (7) | 0.0155 (6) | −0.0082 (8) |
C5 | 0.0261 (8) | 0.0683 (14) | 0.0529 (11) | 0.0017 (8) | 0.0177 (8) | −0.0129 (10) |
C6 | 0.0315 (8) | 0.0547 (12) | 0.0513 (11) | 0.0167 (8) | 0.0106 (8) | −0.0075 (9) |
C7 | 0.0323 (8) | 0.0319 (9) | 0.0326 (8) | 0.0053 (6) | 0.0097 (6) | −0.0066 (6) |
C8 | 0.0389 (8) | 0.0262 (8) | 0.0264 (7) | −0.0010 (6) | 0.0099 (6) | −0.0048 (6) |
C9 | 0.0408 (10) | 0.0737 (15) | 0.0464 (10) | −0.0196 (10) | 0.0226 (8) | −0.0039 (10) |
C10 | 0.0619 (12) | 0.0323 (10) | 0.0402 (9) | −0.0122 (8) | 0.0193 (8) | 0.0001 (8) |
C11 | 0.0206 (6) | 0.0290 (7) | 0.0289 (7) | 0.0005 (5) | 0.0128 (5) | −0.0009 (6) |
C12 | 0.0385 (8) | 0.0286 (8) | 0.0291 (7) | 0.0031 (6) | 0.0141 (6) | 0.0056 (6) |
C13 | 0.0361 (8) | 0.0362 (9) | 0.0252 (7) | 0.0021 (6) | 0.0125 (6) | 0.0028 (6) |
C14 | 0.0238 (6) | 0.0300 (8) | 0.0300 (7) | −0.0009 (5) | 0.0132 (6) | −0.0027 (6) |
C16 | 0.0285 (7) | 0.0326 (8) | 0.0257 (7) | 0.0035 (6) | 0.0097 (6) | 0.0048 (6) |
C15 | 0.0325 (7) | 0.0276 (8) | 0.0331 (8) | 0.0020 (6) | 0.0122 (6) | 0.0035 (6) |
Cl—C14 | 1.7355 (16) | C8—C10 | 1.480 (2) |
S—O2 | 1.4902 (13) | C9—H9A | 0.9600 |
S—C1 | 1.7457 (15) | C9—H9B | 0.9600 |
S—C11 | 1.7966 (16) | C9—H9C | 0.9600 |
O1—C8 | 1.372 (2) | C10—H10A | 0.9600 |
O1—C7 | 1.384 (2) | C10—H10B | 0.9600 |
C1—C8 | 1.352 (2) | C10—H10C | 0.9600 |
C1—C2 | 1.445 (2) | C11—C16 | 1.375 (2) |
C2—C7 | 1.387 (2) | C11—C12 | 1.387 (2) |
C2—C3 | 1.394 (2) | C12—C13 | 1.379 (2) |
C3—C4 | 1.393 (2) | C12—H12 | 0.9300 |
C3—H3 | 0.9300 | C13—C14 | 1.381 (2) |
C4—C5 | 1.401 (3) | C13—H13 | 0.9300 |
C4—C9 | 1.504 (3) | C14—C15 | 1.381 (2) |
C5—C6 | 1.375 (3) | C16—C15 | 1.391 (2) |
C5—H5 | 0.9300 | C16—H16 | 0.9300 |
C6—C7 | 1.381 (3) | C15—H15 | 0.9300 |
C6—H6 | 0.9300 | ||
O2—S—C1 | 108.59 (7) | C4—C9—H9B | 109.5 |
O2—S—C11 | 106.42 (8) | H9A—C9—H9B | 109.5 |
C1—S—C11 | 97.08 (7) | C4—C9—H9C | 109.5 |
C8—O1—C7 | 106.41 (13) | H9A—C9—H9C | 109.5 |
C8—C1—C2 | 107.99 (14) | H9B—C9—H9C | 109.5 |
C8—C1—S | 122.84 (12) | C8—C10—H10A | 109.5 |
C2—C1—S | 129.17 (12) | C8—C10—H10B | 109.5 |
C7—C2—C3 | 119.70 (14) | H10A—C10—H10B | 109.5 |
C7—C2—C1 | 104.31 (14) | C8—C10—H10C | 109.5 |
C3—C2—C1 | 135.99 (14) | H10A—C10—H10C | 109.5 |
C4—C3—C2 | 118.93 (16) | H10B—C10—H10C | 109.5 |
C4—C3—H3 | 120.5 | C16—C11—C12 | 121.26 (15) |
C2—C3—H3 | 120.5 | C16—C11—S | 119.15 (11) |
C3—C4—C5 | 119.02 (18) | C12—C11—S | 119.47 (12) |
C3—C4—C9 | 120.41 (18) | C13—C12—C11 | 119.08 (15) |
C5—C4—C9 | 120.57 (17) | C13—C12—H12 | 120.5 |
C6—C5—C4 | 123.03 (17) | C11—C12—H12 | 120.5 |
C6—C5—H5 | 118.5 | C12—C13—C14 | 119.60 (14) |
C4—C5—H5 | 118.5 | C12—C13—H13 | 120.2 |
C5—C6—C7 | 116.50 (17) | C14—C13—H13 | 120.2 |
C5—C6—H6 | 121.8 | C13—C14—C15 | 121.69 (15) |
C7—C6—H6 | 121.8 | C13—C14—Cl | 118.62 (12) |
C6—C7—O1 | 126.38 (17) | C15—C14—Cl | 119.68 (13) |
C6—C7—C2 | 122.83 (18) | C11—C16—C15 | 119.85 (14) |
O1—C7—C2 | 110.79 (14) | C11—C16—H16 | 120.1 |
C1—C8—O1 | 110.50 (14) | C15—C16—H16 | 120.1 |
C1—C8—C10 | 133.36 (16) | C14—C15—C16 | 118.51 (15) |
O1—C8—C10 | 116.14 (16) | C14—C15—H15 | 120.7 |
C4—C9—H9A | 109.5 | C16—C15—H15 | 120.7 |
O2—S—C1—C8 | 131.30 (14) | C1—C2—C7—O1 | 0.08 (17) |
C11—S—C1—C8 | −118.68 (14) | C2—C1—C8—O1 | −0.52 (17) |
O2—S—C1—C2 | −48.63 (16) | S—C1—C8—O1 | 179.54 (10) |
C11—S—C1—C2 | 61.39 (15) | C2—C1—C8—C10 | 179.19 (17) |
C8—C1—C2—C7 | 0.26 (17) | S—C1—C8—C10 | −0.7 (3) |
S—C1—C2—C7 | −179.80 (12) | C7—O1—C8—C1 | 0.56 (17) |
C8—C1—C2—C3 | −179.12 (17) | C7—O1—C8—C10 | −179.21 (14) |
S—C1—C2—C3 | 0.8 (3) | O2—S—C11—C16 | −13.00 (13) |
C7—C2—C3—C4 | 0.3 (2) | C1—S—C11—C16 | −124.81 (12) |
C1—C2—C3—C4 | 179.60 (16) | O2—S—C11—C12 | 171.00 (12) |
C2—C3—C4—C5 | 0.1 (2) | C1—S—C11—C12 | 59.20 (13) |
C2—C3—C4—C9 | 179.73 (16) | C16—C11—C12—C13 | 1.4 (2) |
C3—C4—C5—C6 | −0.1 (3) | S—C11—C12—C13 | 177.30 (12) |
C9—C4—C5—C6 | −179.70 (19) | C11—C12—C13—C14 | −0.6 (2) |
C4—C5—C6—C7 | −0.3 (3) | C12—C13—C14—C15 | −0.3 (2) |
C5—C6—C7—O1 | −179.62 (17) | C12—C13—C14—Cl | 179.56 (12) |
C5—C6—C7—C2 | 0.8 (3) | C12—C11—C16—C15 | −1.3 (2) |
C8—O1—C7—C6 | 179.97 (17) | S—C11—C16—C15 | −177.26 (12) |
C8—O1—C7—C2 | −0.38 (17) | C13—C14—C15—C16 | 0.3 (2) |
C3—C2—C7—C6 | −0.7 (2) | Cl—C14—C15—C16 | −179.50 (11) |
C1—C2—C7—C6 | 179.74 (16) | C11—C16—C15—C14 | 0.5 (2) |
C3—C2—C7—O1 | 179.58 (13) |
Cg1 is the centroid of the C1, C2, C7, O1, C8 furan ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C10—H10A···O2i | 0.96 | 2.51 | 3.366 (2) | 148 |
C15—H15···O2ii | 0.93 | 2.60 | 3.353 (2) | 139 |
C13—H13···Cg1iii | 0.93 | 2.85 | 3.566 (2) | 135 |
Symmetry codes: (i) −x+2, y+1/2, −z+3/2; (ii) −x+2, y−1/2, −z+3/2; (iii) x, −y+3/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C16H13ClO2S |
Mr | 304.77 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 173 |
a, b, c (Å) | 12.7673 (19), 11.0206 (18), 11.1232 (17) |
β (°) | 113.674 (6) |
V (Å3) | 1433.4 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.41 |
Crystal size (mm) | 0.50 × 0.30 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.654, 0.746 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12779, 3542, 3118 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.669 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.036, 0.124, 1.03 |
No. of reflections | 3542 |
No. of parameters | 184 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.31, −0.31 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998).
Cg1 is the centroid of the C1, C2, C7, O1, C8 furan ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C10—H10A···O2i | 0.96 | 2.51 | 3.366 (2) | 147.9 |
C15—H15···O2ii | 0.93 | 2.60 | 3.353 (2) | 138.9 |
C13—H13···Cg1iii | 0.93 | 2.85 | 3.566 (2) | 134.6 |
Symmetry codes: (i) −x+2, y+1/2, −z+3/2; (ii) −x+2, y−1/2, −z+3/2; (iii) x, −y+3/2, z−1/2. |
Acknowledgements
This work was supported by Blue-Bio Industry RIC at Dongeui University as a RIC program under the Ministry of Knowledge Economy and Busan city.
References
Brandenburg, K. (1998). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Bruker (2009). APEX2. SADABS and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2010a). Acta Cryst. E66, o472. Web of Science CSD CrossRef IUCr Journals Google Scholar
Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2010b). Acta Cryst. E66, o543. Web of Science CSD CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As a part of our study on the substituent effect on the solid state structures of 3-(4-fluorophenylsulfinyl)-2,5-dimethyl-1-benzofuran analogues (Choi et al., 2010a, b/), we report the crystal structure of the title compound (Fig. 1).
The benzofuran unit is essentially planar, with a mean deviation of 0.004 (2) Å from the least-squares plane defined by the nine constituent atoms. The 4-chlorophenyl ring is nearly perpendicular to the benzofuran plane with a dihedral angle of 82.45 (5)°. In the crystal structure weak intermolecular C—H···O hydrogen bonding and C—H···π interaction are found (Fig. 2 and Table 1).