organic compounds
6-Amino-5-(1-amino-2,2-dicyanovinyl)-3,3a,4,5-tetrahydro-2H-indene-4-spiro-1′-cyclopentane-3a,7-dicarbonitrile–thiophene-2-carbaldehyde (1/0.5)
aDepartment of Chemistry, Faculty of Science, King Abdul Aziz University, PO Box 80203, Jeddah, Saudi Arabia, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: seikweng@um.edu.my
In each of the two independent indene-4-spiropentane molecules in the 19H18N6·0.5C5H4OS, the cyclohexene ring adopts a half-chair conformation and the cyclopentene and cyclopentane rings adopt envelope conformations. The mean plane through the cyclohexene/cyclopentene fused system is aligned at a dihedral angle of 77.9 (1)° with respect to the mean plane through the cyclopentane ring in one molecule and 87.0 (1)° in the other. In the crystal, adjacent indene-4-spiropentane molecules are linked by N—H⋯N hydrogen bonds into a three-dimensional network. The spaces within the network are occupied by the thiophene-2-carbaldehyde molecules. The thiophene-2-carbaldehyde unit is disordered over two positions of equal occupancy. The crystal studied was found to be a non-morohedral twin with two minor twin components of 18.4 and 9.7%.
of the title 2:1 adduct, CRelated literature
For our report of the condensation of cyclopentylidenemalononitrile and thiophene-2-carbaldehyde to form 2,5-bis(thienylidene)-1-dicyanomethylene-cyclopentane, a purple-colored compound suitable for application as a dye, see: Asiri (2003). For a related structure, see: Nesterov & Viltchinskaia (2000). For the treatment of twinned diffraction data, see: Spek (2009).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536810034434/xu5020sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810034434/xu5020Isup2.hkl
Cyclopentylidenemalononitrile (0.13 g, 1 mmol) and thiophene-2-carbaldehyde (0.22 g, 2 mmol) were heated in an oil bath for 6 h. Ethanol was added to break up the solid material. The product was collected and recrystallized from acetic acid.
Carbon-bound H-atoms were placed in calculated positions (C—H 0.95 to 0.99 Å) and were included in the
in the riding model approximation, with U(H) set to 1.2U(C). The amino H-atoms were similarly positioned (N–H 0.86 Å) by rotating them; their temperature factors were tied by a factor of 1.2. Modeling the amino group as if it was a methyl group but setting the occupancy factor of one of the three H-atoms to zero gave a satisfactory hydrogen bond scheme except for the H2n2 and H3n2 atoms, which were 1.82 Å apart.The thiophene-2-carbaldehyde molecule is disordered over two positions; as the disorder refined to nearly 1:1, the occupancy of each component was set to 0.5. The sulfur–carbon distances were restrained to 1.70±0.01 Å and the oxygen–carbon distances to 1.25±0.01 Å. The excyclic carbon–carbon distances were restrained to 1.50±0.01 Å and the endocyclic ones to 1.35±0.01 Å. All atoms of each component were restrained to lie on a plane. The temperature factors of C41' were set to those of S1, and that of S1' to those of C41 as the pair of atoms are close to each other. The anisotropic temperature factors of the disordered atoms were restrained to be nearly isotropic. The primed carbon atoms were set to those of the unprimed ones; the anisotropic temperature factors of these carbon atoms were restrained to be nearly isotropic.
The structure is a non-meohedrally twinned structure with two minor twin components of 18.5 and 9.7%. The twin domains were identified by the use of PLATON (Spek, 2009). The twinned nature led to a somewhat large weighting scheme.
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. Thermal ellipsoid plot (Barbour, 2001) of the asymmetric unit of the C19H18N6.0.5C5H4OS co-crystal at the 70% probability level; hydrogen atoms are drawn as spheres of arbitrary radius. |
C19H18N6·0.5C5H4OS | V = 1953.1 (4) Å3 |
Mr = 386.46 | Z = 4 |
Triclinic, P1 | F(000) = 812 |
Hall symbol: -P 1 | Dx = 1.314 Mg m−3 |
a = 12.0181 (14) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 13.8109 (15) Å | µ = 0.14 mm−1 |
c = 13.9000 (15) Å | T = 100 K |
α = 60.703 (1)° | Prism, colorless |
β = 77.841 (2)° | 0.45 × 0.05 × 0.05 mm |
γ = 89.879 (2)° |
Bruker SMART APEX diffractometer | 8916 independent reflections |
Radiation source: fine-focus sealed tube | 5141 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.068 |
ω scans | θmax = 27.5°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −15→15 |
Tmin = 0.942, Tmax = 0.993 | k = −17→17 |
18784 measured reflections | l = −18→18 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.074 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.216 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.1073P)2 + 0.3194P] where P = (Fo2 + 2Fc2)/3 |
8916 reflections | (Δ/σ)max = 0.001 |
571 parameters | Δρmax = 0.59 e Å−3 |
94 restraints | Δρmin = −0.50 e Å−3 |
C19H18N6·0.5C5H4OS | γ = 89.879 (2)° |
Mr = 386.46 | V = 1953.1 (4) Å3 |
Triclinic, P1 | Z = 4 |
a = 12.0181 (14) Å | Mo Kα radiation |
b = 13.8109 (15) Å | µ = 0.14 mm−1 |
c = 13.9000 (15) Å | T = 100 K |
α = 60.703 (1)° | 0.45 × 0.05 × 0.05 mm |
β = 77.841 (2)° |
Bruker SMART APEX diffractometer | 8916 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 5141 reflections with I > 2σ(I) |
Tmin = 0.942, Tmax = 0.993 | Rint = 0.068 |
18784 measured reflections |
R[F2 > 2σ(F2)] = 0.074 | 94 restraints |
wR(F2) = 0.216 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.59 e Å−3 |
8916 reflections | Δρmin = −0.50 e Å−3 |
571 parameters |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
N1 | 0.4315 (3) | 0.5673 (3) | 0.3804 (3) | 0.0226 (7) | |
N2 | 0.3308 (2) | 0.4683 (2) | 0.6776 (3) | 0.0185 (7) | |
H2N1 | 0.3882 | 0.4725 | 0.6262 | 0.022* | |
H2N2 | 0.2992 | 0.4002 | 0.7194 | 0.022* | |
N3 | 0.0952 (2) | 0.3434 (2) | 0.8014 (3) | 0.0188 (7) | |
H3N1 | 0.0890 | 0.2827 | 0.8652 | 0.023* | |
H3N2 | 0.1512 | 0.3434 | 0.7514 | 0.023* | |
N4 | 0.0331 (3) | 0.2262 (2) | 1.0946 (3) | 0.0251 (7) | |
N5 | 0.1735 (3) | 0.5862 (3) | 0.9363 (3) | 0.0265 (8) | |
N6 | 0.2511 (3) | 0.8177 (2) | 0.5964 (3) | 0.0208 (7) | |
N7 | 0.1317 (3) | 1.0660 (3) | 0.3768 (3) | 0.0232 (7) | |
N8 | 0.0847 (2) | 0.9640 (2) | 0.6749 (3) | 0.0166 (6) | |
H8N1 | 0.0700 | 0.9439 | 0.6288 | 0.020* | |
H8N2 | 0.0894 | 0.9057 | 0.7372 | 0.020* | |
N9 | 0.2564 (2) | 0.8396 (2) | 0.8127 (3) | 0.0167 (6) | |
H9N1 | 0.2118 | 0.7820 | 0.8678 | 0.020* | |
H9N2 | 0.2489 | 0.8475 | 0.7491 | 0.020* | |
N10 | 0.1724 (3) | 0.7429 (3) | 1.1069 (3) | 0.0308 (8) | |
N11 | 0.1138 (3) | 1.0999 (3) | 0.9271 (3) | 0.0283 (8) | |
N12 | 0.2061 (3) | 1.3168 (2) | 0.5990 (3) | 0.0199 (7) | |
C1 | 0.1173 (3) | 0.7121 (3) | 0.5405 (3) | 0.0138 (7) | |
C2 | 0.0404 (3) | 0.7911 (3) | 0.4653 (3) | 0.0182 (8) | |
H2A | −0.0368 | 0.7515 | 0.4857 | 0.022* | |
H2B | 0.0323 | 0.8573 | 0.4751 | 0.022* | |
C3 | 0.1023 (3) | 0.8262 (3) | 0.3422 (3) | 0.0247 (9) | |
H3A | 0.0473 | 0.8245 | 0.2990 | 0.030* | |
H3B | 0.1441 | 0.9023 | 0.3028 | 0.030* | |
C4 | 0.1835 (3) | 0.7411 (3) | 0.3552 (3) | 0.0195 (8) | |
H4 | 0.2238 | 0.7320 | 0.2941 | 0.023* | |
C5 | 0.1931 (3) | 0.6794 (3) | 0.4618 (3) | 0.0135 (7) | |
C6 | 0.2654 (3) | 0.5934 (3) | 0.5125 (3) | 0.0133 (7) | |
C7 | 0.2539 (3) | 0.5343 (3) | 0.6275 (3) | 0.0139 (7) | |
C8 | 0.1539 (3) | 0.5441 (3) | 0.7069 (3) | 0.0141 (7) | |
H8 | 0.1863 | 0.5919 | 0.7323 | 0.017* | |
C9 | 0.0552 (3) | 0.6065 (3) | 0.6523 (3) | 0.0149 (7) | |
C10 | −0.0223 (3) | 0.5370 (3) | 0.6247 (3) | 0.0162 (7) | |
H10A | −0.0112 | 0.5705 | 0.5416 | 0.019* | |
H10B | −0.0036 | 0.4590 | 0.6567 | 0.019* | |
C11 | −0.1455 (3) | 0.5403 (3) | 0.6799 (3) | 0.0286 (9) | |
H11A | −0.1788 | 0.6042 | 0.6259 | 0.034* | |
H11B | −0.1941 | 0.4702 | 0.7057 | 0.034* | |
C12 | −0.1362 (4) | 0.5532 (4) | 0.7792 (4) | 0.0334 (10) | |
H12A | −0.1285 | 0.4807 | 0.8445 | 0.040* | |
H12B | −0.2041 | 0.5839 | 0.8033 | 0.040* | |
C13 | −0.0279 (3) | 0.6350 (3) | 0.7332 (3) | 0.0173 (8) | |
H13A | 0.0057 | 0.6258 | 0.7960 | 0.021* | |
H13B | −0.0453 | 0.7131 | 0.6918 | 0.021* | |
C14 | 0.1147 (3) | 0.4307 (3) | 0.8139 (3) | 0.0150 (7) | |
C15 | 0.1041 (3) | 0.4207 (3) | 0.9191 (3) | 0.0168 (8) | |
C16 | 0.0647 (3) | 0.3143 (3) | 1.0194 (3) | 0.0202 (8) | |
C17 | 0.1406 (3) | 0.5114 (3) | 0.9310 (3) | 0.0195 (8) | |
C18 | 0.3565 (3) | 0.5790 (3) | 0.4394 (3) | 0.0157 (7) | |
C19 | 0.1922 (3) | 0.7745 (3) | 0.5698 (3) | 0.0159 (7) | |
C20 | 0.3623 (3) | 1.2092 (3) | 0.5421 (3) | 0.0133 (7) | |
C21 | 0.4758 (3) | 1.2877 (3) | 0.4679 (3) | 0.0180 (8) | |
H21A | 0.4808 | 1.3517 | 0.4810 | 0.022* | |
H21B | 0.5430 | 1.2466 | 0.4856 | 0.022* | |
C22 | 0.4708 (3) | 1.3282 (3) | 0.3445 (3) | 0.0255 (9) | |
H22A | 0.4475 | 1.4044 | 0.3088 | 0.031* | |
H22B | 0.5462 | 1.3284 | 0.2987 | 0.031* | |
C23 | 0.3825 (3) | 1.2450 (3) | 0.3546 (3) | 0.0202 (8) | |
H23 | 0.3701 | 1.2394 | 0.2921 | 0.024* | |
C24 | 0.3239 (3) | 1.1801 (3) | 0.4614 (3) | 0.0146 (7) | |
C25 | 0.2275 (3) | 1.0928 (3) | 0.5128 (3) | 0.0134 (7) | |
C26 | 0.1841 (3) | 1.0304 (3) | 0.6278 (3) | 0.0127 (7) | |
C27 | 0.2436 (3) | 1.0412 (3) | 0.7085 (3) | 0.0122 (7) | |
H27 | 0.2003 | 1.0924 | 0.7300 | 0.015* | |
C28 | 0.3695 (3) | 1.0996 (3) | 0.6531 (3) | 0.0129 (7) | |
C29 | 0.4198 (3) | 1.1257 (3) | 0.7329 (3) | 0.0163 (7) | |
H29A | 0.4215 | 1.2063 | 0.7082 | 0.020* | |
H29B | 0.3731 | 1.0822 | 0.8120 | 0.020* | |
C30 | 0.5411 (3) | 1.0923 (3) | 0.7248 (4) | 0.0271 (9) | |
H30A | 0.5963 | 1.1539 | 0.6596 | 0.033* | |
H30B | 0.5658 | 1.0714 | 0.7954 | 0.033* | |
C31 | 0.5307 (3) | 0.9926 (3) | 0.7078 (4) | 0.0279 (9) | |
H31A | 0.4947 | 0.9244 | 0.7803 | 0.033* | |
H31B | 0.6067 | 0.9788 | 0.6758 | 0.033* | |
C32 | 0.4547 (3) | 1.0274 (3) | 0.6243 (3) | 0.0167 (8) | |
H32A | 0.4128 | 0.9608 | 0.6331 | 0.020* | |
H32B | 0.5013 | 1.0714 | 0.5452 | 0.020* | |
C33 | 0.2289 (3) | 0.9305 (3) | 0.8186 (3) | 0.0127 (7) | |
C34 | 0.1865 (3) | 0.9270 (3) | 0.9199 (3) | 0.0165 (8) | |
C35 | 0.1772 (3) | 0.8260 (3) | 1.0245 (3) | 0.0206 (8) | |
C36 | 0.1474 (3) | 1.0222 (3) | 0.9246 (3) | 0.0193 (8) | |
C37 | 0.1739 (3) | 1.0779 (3) | 0.4380 (3) | 0.0162 (7) | |
C38 | 0.2760 (3) | 1.2720 (3) | 0.5729 (3) | 0.0150 (7) | |
S1 | 0.5191 (4) | 0.2016 (3) | 0.9487 (3) | 0.0527 (7) | 0.50 |
O1 | 0.3269 (6) | 0.0090 (5) | 1.0456 (5) | 0.0475 (17) | 0.50 |
C39 | 0.3016 (8) | 0.0856 (6) | 1.0644 (6) | 0.038 (2) | 0.50 |
H39 | 0.2264 | 0.0802 | 1.1067 | 0.046* | 0.50 |
C40 | 0.3831 (6) | 0.1866 (7) | 1.0241 (5) | 0.038 (2) | 0.50 |
C41 | 0.3604 (14) | 0.2732 (10) | 1.0424 (10) | 0.0546 (8) | 0.50 |
H41 | 0.2887 | 0.2782 | 1.0833 | 0.066* | 0.50 |
C42 | 0.4531 (9) | 0.3522 (9) | 0.9949 (8) | 0.065 (3) | 0.50 |
H42 | 0.4536 | 0.4191 | 0.9987 | 0.078* | 0.50 |
C43 | 0.5438 (10) | 0.3246 (6) | 0.9423 (7) | 0.054 (3) | 0.50 |
H43 | 0.6154 | 0.3704 | 0.9048 | 0.064* | 0.50 |
S1' | 0.3563 (4) | 0.2909 (3) | 1.0178 (3) | 0.0546 (8) | 0.50 |
O1' | 0.5647 (7) | 0.4697 (6) | 0.9167 (6) | 0.072 (2) | 0.50 |
C39' | 0.5830 (9) | 0.3837 (7) | 0.9125 (7) | 0.053 (3) | 0.50 |
H39' | 0.6586 | 0.3787 | 0.8789 | 0.063* | 0.50 |
C40' | 0.4948 (6) | 0.2880 (8) | 0.9564 (5) | 0.041 (3) | 0.50 |
C41' | 0.5067 (14) | 0.1919 (10) | 0.9553 (9) | 0.0527 (7) | 0.50 |
H41' | 0.5776 | 0.1758 | 0.9243 | 0.063* | 0.50 |
C42' | 0.4095 (8) | 0.1200 (8) | 1.0020 (7) | 0.044 (2) | 0.50 |
H42' | 0.4042 | 0.0486 | 1.0078 | 0.053* | 0.50 |
C43' | 0.3215 (9) | 0.1629 (7) | 1.0391 (6) | 0.051 (3) | 0.50 |
H43' | 0.2462 | 0.1243 | 1.0744 | 0.061* | 0.50 |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0205 (16) | 0.0246 (16) | 0.0219 (19) | 0.0060 (13) | −0.0030 (14) | −0.0118 (15) |
N2 | 0.0155 (15) | 0.0125 (14) | 0.0216 (18) | 0.0030 (11) | −0.0023 (13) | −0.0048 (13) |
N3 | 0.0218 (16) | 0.0111 (14) | 0.0191 (18) | 0.0012 (11) | −0.0015 (13) | −0.0054 (13) |
N4 | 0.0316 (18) | 0.0172 (16) | 0.0164 (18) | −0.0003 (13) | −0.0026 (14) | −0.0019 (14) |
N5 | 0.040 (2) | 0.0175 (16) | 0.0218 (19) | 0.0057 (14) | −0.0104 (15) | −0.0088 (14) |
N6 | 0.0261 (17) | 0.0133 (14) | 0.0215 (18) | 0.0028 (12) | −0.0055 (14) | −0.0077 (14) |
N7 | 0.0260 (17) | 0.0238 (16) | 0.0239 (19) | 0.0025 (13) | −0.0096 (14) | −0.0136 (15) |
N8 | 0.0219 (15) | 0.0101 (13) | 0.0157 (17) | 0.0016 (11) | −0.0090 (13) | −0.0032 (12) |
N9 | 0.0236 (16) | 0.0116 (13) | 0.0129 (16) | 0.0024 (11) | −0.0070 (13) | −0.0035 (12) |
N10 | 0.044 (2) | 0.0232 (17) | 0.021 (2) | 0.0066 (15) | −0.0112 (16) | −0.0067 (16) |
N11 | 0.041 (2) | 0.0181 (16) | 0.0217 (19) | 0.0016 (14) | −0.0001 (15) | −0.0093 (15) |
N12 | 0.0275 (17) | 0.0113 (14) | 0.0208 (18) | 0.0018 (12) | −0.0070 (14) | −0.0074 (13) |
C1 | 0.0172 (16) | 0.0097 (15) | 0.0162 (19) | 0.0040 (12) | −0.0050 (14) | −0.0075 (14) |
C2 | 0.0199 (18) | 0.0136 (16) | 0.020 (2) | 0.0069 (13) | −0.0064 (15) | −0.0068 (15) |
C3 | 0.032 (2) | 0.0210 (19) | 0.018 (2) | 0.0074 (16) | −0.0072 (17) | −0.0074 (17) |
C4 | 0.0238 (19) | 0.0185 (17) | 0.015 (2) | 0.0029 (14) | −0.0045 (15) | −0.0073 (16) |
C5 | 0.0164 (16) | 0.0097 (15) | 0.0152 (19) | 0.0023 (12) | −0.0046 (14) | −0.0065 (14) |
C6 | 0.0151 (16) | 0.0092 (15) | 0.0140 (19) | 0.0028 (12) | −0.0038 (14) | −0.0045 (14) |
C7 | 0.0159 (16) | 0.0080 (15) | 0.017 (2) | 0.0014 (12) | −0.0044 (14) | −0.0055 (14) |
C8 | 0.0177 (17) | 0.0118 (15) | 0.0130 (19) | 0.0021 (13) | −0.0034 (14) | −0.0064 (14) |
C9 | 0.0178 (17) | 0.0109 (15) | 0.0147 (19) | 0.0039 (13) | −0.0057 (14) | −0.0047 (14) |
C10 | 0.0205 (18) | 0.0126 (16) | 0.018 (2) | 0.0042 (13) | −0.0078 (15) | −0.0081 (15) |
C11 | 0.0220 (19) | 0.034 (2) | 0.027 (2) | −0.0009 (17) | −0.0042 (17) | −0.0133 (19) |
C12 | 0.028 (2) | 0.038 (2) | 0.033 (3) | −0.0014 (18) | 0.0011 (19) | −0.021 (2) |
C13 | 0.0214 (18) | 0.0168 (17) | 0.016 (2) | 0.0073 (14) | −0.0045 (15) | −0.0105 (15) |
C14 | 0.0116 (16) | 0.0140 (16) | 0.018 (2) | 0.0035 (12) | −0.0030 (14) | −0.0071 (15) |
C15 | 0.0217 (18) | 0.0112 (16) | 0.016 (2) | 0.0033 (13) | −0.0061 (15) | −0.0047 (15) |
C16 | 0.0219 (19) | 0.0192 (18) | 0.021 (2) | 0.0046 (15) | −0.0031 (16) | −0.0114 (17) |
C17 | 0.0229 (19) | 0.0200 (18) | 0.016 (2) | 0.0070 (15) | −0.0034 (15) | −0.0103 (16) |
C18 | 0.0185 (17) | 0.0107 (15) | 0.0159 (19) | 0.0019 (13) | −0.0052 (15) | −0.0048 (14) |
C19 | 0.0197 (17) | 0.0080 (15) | 0.015 (2) | 0.0033 (13) | −0.0008 (14) | −0.0039 (14) |
C20 | 0.0166 (16) | 0.0078 (14) | 0.0142 (19) | 0.0010 (12) | −0.0061 (14) | −0.0036 (14) |
C21 | 0.0202 (18) | 0.0141 (16) | 0.017 (2) | −0.0029 (13) | −0.0049 (15) | −0.0054 (15) |
C22 | 0.032 (2) | 0.0214 (19) | 0.014 (2) | −0.0091 (16) | 0.0002 (16) | −0.0038 (16) |
C23 | 0.0273 (19) | 0.0185 (18) | 0.014 (2) | −0.0028 (15) | −0.0043 (15) | −0.0073 (16) |
C24 | 0.0173 (17) | 0.0136 (16) | 0.0158 (19) | 0.0019 (13) | −0.0047 (14) | −0.0093 (15) |
C25 | 0.0166 (16) | 0.0105 (15) | 0.0159 (19) | 0.0023 (13) | −0.0070 (14) | −0.0076 (14) |
C26 | 0.0150 (16) | 0.0087 (15) | 0.0161 (19) | 0.0054 (12) | −0.0071 (14) | −0.0063 (14) |
C27 | 0.0159 (16) | 0.0080 (14) | 0.0109 (18) | 0.0023 (12) | −0.0046 (13) | −0.0029 (14) |
C28 | 0.0177 (17) | 0.0083 (15) | 0.0122 (18) | 0.0006 (12) | −0.0046 (14) | −0.0042 (14) |
C29 | 0.0191 (17) | 0.0159 (17) | 0.0139 (19) | 0.0000 (13) | −0.0068 (14) | −0.0065 (15) |
C30 | 0.024 (2) | 0.028 (2) | 0.034 (2) | 0.0049 (16) | −0.0169 (18) | −0.0156 (19) |
C31 | 0.028 (2) | 0.025 (2) | 0.036 (3) | 0.0131 (16) | −0.0181 (19) | −0.0155 (19) |
C32 | 0.0166 (17) | 0.0118 (16) | 0.019 (2) | 0.0024 (13) | −0.0056 (15) | −0.0050 (15) |
C33 | 0.0142 (16) | 0.0095 (15) | 0.0110 (18) | −0.0011 (12) | −0.0047 (13) | −0.0019 (14) |
C34 | 0.0224 (18) | 0.0137 (16) | 0.0127 (19) | −0.0012 (13) | −0.0056 (15) | −0.0054 (15) |
C35 | 0.029 (2) | 0.0166 (18) | 0.019 (2) | 0.0004 (15) | −0.0079 (16) | −0.0096 (17) |
C36 | 0.0255 (19) | 0.0165 (17) | 0.0100 (19) | −0.0024 (14) | −0.0007 (15) | −0.0036 (15) |
C37 | 0.0202 (17) | 0.0107 (15) | 0.0155 (19) | 0.0021 (13) | −0.0051 (15) | −0.0045 (14) |
C38 | 0.0218 (18) | 0.0091 (15) | 0.016 (2) | 0.0005 (13) | −0.0096 (15) | −0.0061 (15) |
S1 | 0.0638 (17) | 0.0479 (14) | 0.0463 (14) | 0.0097 (11) | −0.0051 (12) | −0.0267 (11) |
O1 | 0.060 (4) | 0.040 (3) | 0.054 (4) | 0.014 (3) | −0.027 (3) | −0.026 (3) |
C39 | 0.041 (5) | 0.043 (5) | 0.032 (5) | 0.007 (4) | −0.020 (4) | −0.016 (4) |
C40 | 0.050 (6) | 0.035 (5) | 0.038 (5) | 0.011 (4) | −0.021 (4) | −0.021 (4) |
C41 | 0.0418 (12) | 0.0609 (18) | 0.077 (2) | 0.0194 (12) | −0.0207 (14) | −0.0436 (17) |
C42 | 0.070 (7) | 0.052 (6) | 0.083 (7) | 0.003 (5) | −0.023 (6) | −0.040 (5) |
C43 | 0.051 (7) | 0.044 (6) | 0.062 (7) | −0.014 (5) | −0.001 (5) | −0.029 (5) |
S1' | 0.0418 (12) | 0.0609 (18) | 0.077 (2) | 0.0194 (12) | −0.0207 (14) | −0.0436 (17) |
O1' | 0.074 (5) | 0.054 (4) | 0.080 (5) | 0.013 (4) | −0.010 (4) | −0.031 (4) |
C39' | 0.047 (6) | 0.053 (6) | 0.056 (6) | 0.019 (5) | −0.016 (5) | −0.023 (5) |
C40' | 0.039 (5) | 0.042 (5) | 0.037 (5) | 0.008 (4) | −0.014 (4) | −0.015 (4) |
C41' | 0.0638 (17) | 0.0479 (14) | 0.0463 (14) | 0.0097 (11) | −0.0051 (12) | −0.0267 (11) |
C42' | 0.058 (6) | 0.050 (5) | 0.034 (5) | 0.007 (4) | −0.021 (4) | −0.024 (4) |
C43' | 0.057 (6) | 0.050 (6) | 0.055 (6) | 0.010 (5) | −0.027 (5) | −0.029 (5) |
N1—C18 | 1.152 (4) | C20—C24 | 1.515 (5) |
N2—C7 | 1.349 (4) | C20—C21 | 1.555 (4) |
N2—H2N1 | 0.8600 | C20—C28 | 1.565 (4) |
N2—H2N2 | 0.8600 | C21—C22 | 1.538 (5) |
N3—C14 | 1.327 (4) | C21—H21A | 0.9900 |
N3—H3N1 | 0.8600 | C21—H21B | 0.9900 |
N3—H3N2 | 0.8600 | C22—C23 | 1.499 (5) |
N4—C16 | 1.144 (4) | C22—H22A | 0.9900 |
N5—C17 | 1.148 (4) | C22—H22B | 0.9900 |
N6—C19 | 1.149 (4) | C23—C24 | 1.328 (5) |
N7—C37 | 1.152 (4) | C23—H23 | 0.9500 |
N8—C26 | 1.336 (4) | C24—C25 | 1.456 (4) |
N8—H8N1 | 0.8600 | C25—C26 | 1.369 (5) |
N8—H8N2 | 0.8600 | C25—C37 | 1.425 (5) |
N9—C33 | 1.335 (4) | C26—C27 | 1.514 (5) |
N9—H9N1 | 0.8600 | C27—C33 | 1.519 (4) |
N9—H9N2 | 0.8600 | C27—C28 | 1.562 (4) |
N10—C35 | 1.148 (5) | C27—H27 | 1.0000 |
N11—C36 | 1.159 (5) | C28—C29 | 1.550 (5) |
N12—C38 | 1.145 (4) | C28—C32 | 1.554 (5) |
C1—C19 | 1.490 (5) | C29—C30 | 1.526 (5) |
C1—C5 | 1.514 (5) | C29—H29A | 0.9900 |
C1—C9 | 1.548 (4) | C29—H29B | 0.9900 |
C1—C2 | 1.557 (5) | C30—C31 | 1.516 (5) |
C2—C3 | 1.539 (5) | C30—H30A | 0.9900 |
C2—H2A | 0.9900 | C30—H30B | 0.9900 |
C2—H2B | 0.9900 | C31—C32 | 1.520 (5) |
C3—C4 | 1.492 (5) | C31—H31A | 0.9900 |
C3—H3A | 0.9900 | C31—H31B | 0.9900 |
C3—H3B | 0.9900 | C32—H32A | 0.9900 |
C4—C5 | 1.332 (5) | C32—H32B | 0.9900 |
C4—H4 | 0.9500 | C33—C34 | 1.370 (5) |
C5—C6 | 1.447 (5) | C34—C35 | 1.421 (5) |
C6—C7 | 1.368 (5) | C34—C36 | 1.422 (5) |
C6—C18 | 1.414 (5) | S1—C43 | 1.681 (8) |
C7—C8 | 1.505 (5) | S1—C40 | 1.698 (8) |
C8—C14 | 1.522 (4) | O1—C39 | 1.231 (8) |
C8—C9 | 1.569 (5) | C39—C40 | 1.492 (8) |
C8—H8 | 1.0000 | C39—H39 | 0.9500 |
C9—C13 | 1.542 (5) | C40—C41 | 1.355 (10) |
C9—C10 | 1.564 (4) | C41—C42 | 1.364 (10) |
C10—C11 | 1.530 (5) | C41—H41 | 0.9500 |
C10—H10A | 0.9900 | C42—C43 | 1.343 (9) |
C10—H10B | 0.9900 | C42—H42 | 0.9500 |
C11—C12 | 1.502 (6) | C43—H43 | 0.9500 |
C11—H11A | 0.9900 | S1'—C43' | 1.682 (8) |
C11—H11B | 0.9900 | S1'—C40' | 1.714 (8) |
C12—C13 | 1.526 (5) | O1'—C39' | 1.234 (8) |
C12—H12A | 0.9900 | C39'—C40' | 1.479 (8) |
C12—H12B | 0.9900 | C39'—H39' | 0.9500 |
C13—H13A | 0.9900 | C40'—C41' | 1.340 (10) |
C13—H13B | 0.9900 | C41'—C42' | 1.351 (10) |
C14—C15 | 1.378 (5) | C41'—H41' | 0.9500 |
C15—C17 | 1.423 (5) | C42'—C43' | 1.342 (9) |
C15—C16 | 1.430 (5) | C42'—H42' | 0.9500 |
C20—C38 | 1.478 (5) | C43'—H43' | 0.9500 |
C7—N2—H2N1 | 109.5 | C20—C21—H21B | 110.7 |
C7—N2—H2N2 | 109.5 | H21A—C21—H21B | 108.8 |
H2N1—N2—H2N2 | 109.5 | C23—C22—C21 | 104.2 (3) |
C14—N3—H3N1 | 109.5 | C23—C22—H22A | 110.9 |
C14—N3—H3N2 | 109.5 | C21—C22—H22A | 110.9 |
H3N1—N3—H3N2 | 109.5 | C23—C22—H22B | 110.9 |
C26—N8—H8N1 | 109.5 | C21—C22—H22B | 110.9 |
C26—N8—H8N2 | 109.5 | H22A—C22—H22B | 108.9 |
H8N1—N8—H8N2 | 109.5 | C24—C23—C22 | 111.9 (3) |
C33—N9—H9N1 | 109.5 | C24—C23—H23 | 124.1 |
C33—N9—H9N2 | 109.5 | C22—C23—H23 | 124.1 |
H9N1—N9—H9N2 | 109.5 | C23—C24—C25 | 132.4 (3) |
C19—C1—C5 | 107.9 (3) | C23—C24—C20 | 112.1 (3) |
C19—C1—C9 | 107.8 (3) | C25—C24—C20 | 115.4 (3) |
C5—C1—C9 | 110.4 (3) | C26—C25—C37 | 119.9 (3) |
C19—C1—C2 | 110.7 (3) | C26—C25—C24 | 122.7 (3) |
C5—C1—C2 | 103.0 (3) | C37—C25—C24 | 117.3 (3) |
C9—C1—C2 | 116.8 (3) | N8—C26—C25 | 123.0 (3) |
C3—C2—C1 | 105.4 (3) | N8—C26—C27 | 116.3 (3) |
C3—C2—H2A | 110.7 | C25—C26—C27 | 120.5 (3) |
C1—C2—H2A | 110.7 | C26—C27—C33 | 110.9 (3) |
C3—C2—H2B | 110.7 | C26—C27—C28 | 114.1 (3) |
C1—C2—H2B | 110.7 | C33—C27—C28 | 114.6 (3) |
H2A—C2—H2B | 108.8 | C26—C27—H27 | 105.4 |
C4—C3—C2 | 103.9 (3) | C33—C27—H27 | 105.4 |
C4—C3—H3A | 111.0 | C28—C27—H27 | 105.4 |
C2—C3—H3A | 111.0 | C29—C28—C32 | 104.7 (3) |
C4—C3—H3B | 111.0 | C29—C28—C27 | 112.1 (3) |
C2—C3—H3B | 111.0 | C32—C28—C27 | 113.7 (2) |
H3A—C3—H3B | 109.0 | C29—C28—C20 | 111.3 (2) |
C5—C4—C3 | 112.5 (3) | C32—C28—C20 | 110.4 (3) |
C5—C4—H4 | 123.8 | C27—C28—C20 | 104.8 (3) |
C3—C4—H4 | 123.8 | C30—C29—C28 | 105.8 (3) |
C4—C5—C6 | 131.9 (3) | C30—C29—H29A | 110.6 |
C4—C5—C1 | 111.7 (3) | C28—C29—H29A | 110.6 |
C6—C5—C1 | 116.2 (3) | C30—C29—H29B | 110.6 |
C7—C6—C18 | 119.9 (3) | C28—C29—H29B | 110.6 |
C7—C6—C5 | 121.5 (3) | H29A—C29—H29B | 108.7 |
C18—C6—C5 | 118.2 (3) | C31—C30—C29 | 103.4 (3) |
N2—C7—C6 | 123.9 (3) | C31—C30—H30A | 111.1 |
N2—C7—C8 | 115.4 (3) | C29—C30—H30A | 111.1 |
C6—C7—C8 | 120.6 (3) | C31—C30—H30B | 111.1 |
C7—C8—C14 | 109.5 (3) | C29—C30—H30B | 111.1 |
C7—C8—C9 | 116.0 (3) | H30A—C30—H30B | 109.0 |
C14—C8—C9 | 114.8 (3) | C30—C31—C32 | 103.3 (3) |
C7—C8—H8 | 105.1 | C30—C31—H31A | 111.1 |
C14—C8—H8 | 105.1 | C32—C31—H31A | 111.1 |
C9—C8—H8 | 105.1 | C30—C31—H31B | 111.1 |
C13—C9—C1 | 112.5 (3) | C32—C31—H31B | 111.1 |
C13—C9—C10 | 104.9 (3) | H31A—C31—H31B | 109.1 |
C1—C9—C10 | 109.4 (3) | C31—C32—C28 | 105.9 (3) |
C13—C9—C8 | 111.2 (3) | C31—C32—H32A | 110.6 |
C1—C9—C8 | 104.7 (3) | C28—C32—H32A | 110.6 |
C10—C9—C8 | 114.3 (3) | C31—C32—H32B | 110.6 |
C11—C10—C9 | 105.6 (3) | C28—C32—H32B | 110.6 |
C11—C10—H10A | 110.6 | H32A—C32—H32B | 108.7 |
C9—C10—H10A | 110.6 | N9—C33—C34 | 122.3 (3) |
C11—C10—H10B | 110.6 | N9—C33—C27 | 118.5 (3) |
C9—C10—H10B | 110.6 | C34—C33—C27 | 119.2 (3) |
H10A—C10—H10B | 108.8 | C33—C34—C35 | 120.5 (3) |
C12—C11—C10 | 104.8 (3) | C33—C34—C36 | 121.7 (3) |
C12—C11—H11A | 110.8 | C35—C34—C36 | 117.8 (3) |
C10—C11—H11A | 110.8 | N10—C35—C34 | 177.5 (4) |
C12—C11—H11B | 110.8 | N11—C36—C34 | 178.6 (4) |
C10—C11—H11B | 110.8 | N7—C37—C25 | 179.3 (4) |
H11A—C11—H11B | 108.9 | N12—C38—C20 | 177.2 (3) |
C11—C12—C13 | 103.6 (3) | C43—S1—C40 | 89.2 (5) |
C11—C12—H12A | 111.0 | O1—C39—C40 | 123.4 (9) |
C13—C12—H12A | 111.0 | O1—C39—H39 | 118.3 |
C11—C12—H12B | 111.0 | C40—C39—H39 | 118.3 |
C13—C12—H12B | 111.0 | C41—C40—C39 | 126.1 (9) |
H12A—C12—H12B | 109.0 | C41—C40—S1 | 113.0 (9) |
C12—C13—C9 | 105.6 (3) | C39—C40—S1 | 120.9 (7) |
C12—C13—H13A | 110.6 | C40—C41—C42 | 111.7 (13) |
C9—C13—H13A | 110.6 | C40—C41—H41 | 124.1 |
C12—C13—H13B | 110.6 | C42—C41—H41 | 124.1 |
C9—C13—H13B | 110.6 | C43—C42—C41 | 112.2 (12) |
H13A—C13—H13B | 108.8 | C43—C42—H42 | 123.9 |
N3—C14—C15 | 122.2 (3) | C41—C42—H42 | 123.9 |
N3—C14—C8 | 117.8 (3) | C42—C43—S1 | 113.9 (8) |
C15—C14—C8 | 119.9 (3) | C42—C43—H43 | 123.1 |
C14—C15—C17 | 121.6 (3) | S1—C43—H43 | 123.1 |
C14—C15—C16 | 119.6 (3) | C43'—S1'—C40' | 89.4 (5) |
C17—C15—C16 | 118.6 (3) | O1'—C39'—C40' | 124.3 (10) |
N4—C16—C15 | 175.1 (4) | O1'—C39'—H39' | 117.9 |
N5—C17—C15 | 177.1 (4) | C40'—C39'—H39' | 117.9 |
N1—C18—C6 | 179.4 (4) | C41'—C40'—C39' | 128.4 (9) |
N6—C19—C1 | 176.7 (4) | C41'—C40'—S1' | 111.0 (10) |
C38—C20—C24 | 108.4 (3) | C39'—C40'—S1' | 120.6 (8) |
C38—C20—C21 | 109.8 (3) | C40'—C41'—C42' | 114.6 (14) |
C24—C20—C21 | 102.9 (3) | C40'—C41'—H41' | 122.7 |
C38—C20—C28 | 108.4 (3) | C42'—C41'—H41' | 122.7 |
C24—C20—C28 | 109.8 (2) | C43'—C42'—C41' | 110.9 (12) |
C21—C20—C28 | 117.2 (3) | C43'—C42'—H42' | 124.5 |
C22—C21—C20 | 105.1 (3) | C41'—C42'—H42' | 124.5 |
C22—C21—H21A | 110.7 | C42'—C43'—S1' | 114.1 (9) |
C20—C21—H21A | 110.7 | C42'—C43'—H43' | 123.0 |
C22—C21—H21B | 110.7 | S1'—C43'—H43' | 123.0 |
C19—C1—C2—C3 | 97.7 (3) | C38—C20—C24—C25 | −72.8 (3) |
C5—C1—C2—C3 | −17.4 (3) | C21—C20—C24—C25 | 170.9 (3) |
C9—C1—C2—C3 | −138.5 (3) | C28—C20—C24—C25 | 45.5 (4) |
C1—C2—C3—C4 | 18.0 (3) | C23—C24—C25—C26 | 175.6 (4) |
C2—C3—C4—C5 | −12.2 (4) | C20—C24—C25—C26 | −8.6 (5) |
C3—C4—C5—C6 | −175.7 (3) | C23—C24—C25—C37 | −7.9 (6) |
C3—C4—C5—C1 | 0.8 (4) | C20—C24—C25—C37 | 167.9 (3) |
C19—C1—C5—C4 | −106.3 (3) | C37—C25—C26—N8 | −8.1 (5) |
C9—C1—C5—C4 | 136.1 (3) | C24—C25—C26—N8 | 168.3 (3) |
C2—C1—C5—C4 | 10.7 (4) | C37—C25—C26—C27 | 176.9 (3) |
C19—C1—C5—C6 | 70.8 (3) | C24—C25—C26—C27 | −6.6 (5) |
C9—C1—C5—C6 | −46.8 (4) | N8—C26—C27—C33 | 37.1 (4) |
C2—C1—C5—C6 | −172.1 (3) | C25—C26—C27—C33 | −147.6 (3) |
C4—C5—C6—C7 | −174.7 (3) | N8—C26—C27—C28 | 168.3 (3) |
C1—C5—C6—C7 | 8.9 (4) | C25—C26—C27—C28 | −16.4 (4) |
C4—C5—C6—C18 | 11.5 (5) | C26—C27—C28—C29 | 170.8 (3) |
C1—C5—C6—C18 | −164.9 (3) | C33—C27—C28—C29 | −59.8 (4) |
C18—C6—C7—N2 | 6.0 (5) | C26—C27—C28—C32 | −70.7 (4) |
C5—C6—C7—N2 | −167.6 (3) | C33—C27—C28—C32 | 58.7 (4) |
C18—C6—C7—C8 | −176.8 (3) | C26—C27—C28—C20 | 49.9 (3) |
C5—C6—C7—C8 | 9.5 (4) | C33—C27—C28—C20 | 179.3 (3) |
N2—C7—C8—C14 | −39.7 (4) | C38—C20—C28—C29 | −67.2 (3) |
C6—C7—C8—C14 | 142.9 (3) | C24—C20—C28—C29 | 174.5 (3) |
N2—C7—C8—C9 | −171.6 (3) | C21—C20—C28—C29 | 57.7 (4) |
C6—C7—C8—C9 | 11.0 (4) | C38—C20—C28—C32 | 177.0 (2) |
C19—C1—C9—C13 | 65.2 (3) | C24—C20—C28—C32 | 58.7 (3) |
C5—C1—C9—C13 | −177.2 (3) | C21—C20—C28—C32 | −58.1 (4) |
C2—C1—C9—C13 | −60.1 (4) | C38—C20—C28—C27 | 54.2 (3) |
C19—C1—C9—C10 | −178.6 (3) | C24—C20—C28—C27 | −64.1 (3) |
C5—C1—C9—C10 | −61.0 (3) | C21—C20—C28—C27 | 179.1 (3) |
C2—C1—C9—C10 | 56.1 (4) | C32—C28—C29—C30 | 12.5 (3) |
C19—C1—C9—C8 | −55.7 (3) | C27—C28—C29—C30 | 136.3 (3) |
C5—C1—C9—C8 | 61.9 (3) | C20—C28—C29—C30 | −106.7 (3) |
C2—C1—C9—C8 | 179.0 (3) | C28—C29—C30—C31 | −33.5 (4) |
C7—C8—C9—C13 | −167.1 (3) | C29—C30—C31—C32 | 41.6 (4) |
C14—C8—C9—C13 | 63.5 (3) | C30—C31—C32—C28 | −33.9 (4) |
C7—C8—C9—C1 | −45.3 (3) | C29—C28—C32—C31 | 13.1 (3) |
C14—C8—C9—C1 | −174.7 (3) | C27—C28—C32—C31 | −109.6 (3) |
C7—C8—C9—C10 | 74.4 (3) | C20—C28—C32—C31 | 133.0 (3) |
C14—C8—C9—C10 | −55.0 (4) | C26—C27—C33—N9 | 52.2 (4) |
C13—C9—C10—C11 | 6.0 (4) | C28—C27—C33—N9 | −78.8 (4) |
C1—C9—C10—C11 | −114.9 (3) | C26—C27—C33—C34 | −126.9 (3) |
C8—C9—C10—C11 | 128.0 (3) | C28—C27—C33—C34 | 102.1 (4) |
C9—C10—C11—C12 | −28.3 (4) | N9—C33—C34—C35 | 4.2 (5) |
C10—C11—C12—C13 | 39.6 (4) | C27—C33—C34—C35 | −176.8 (3) |
C11—C12—C13—C9 | −35.8 (4) | N9—C33—C34—C36 | −173.9 (3) |
C1—C9—C13—C12 | 136.9 (3) | C27—C33—C34—C36 | 5.1 (5) |
C10—C9—C13—C12 | 18.0 (4) | C28—C20—C38—N12 | −52 (8) |
C8—C9—C13—C12 | −106.0 (3) | O1—C39—C40—C41 | −179.8 (2) |
C7—C8—C14—N3 | −50.7 (4) | O1—C39—C40—S1 | −0.3 (3) |
C9—C8—C14—N3 | 81.8 (4) | C43—S1—C40—C41 | −0.2 (2) |
C7—C8—C14—C15 | 127.3 (3) | C43—S1—C40—C39 | −179.7 (2) |
C9—C8—C14—C15 | −100.2 (4) | C39—C40—C41—C42 | 179.7 (2) |
N3—C14—C15—C17 | 171.0 (3) | S1—C40—C41—C42 | 0.2 (3) |
C8—C14—C15—C17 | −6.9 (5) | C40—C41—C42—C43 | −0.2 (4) |
N3—C14—C15—C16 | −3.5 (5) | C41—C42—C43—S1 | 0.1 (4) |
C8—C14—C15—C16 | 178.5 (3) | C40—S1—C43—C42 | 0.1 (2) |
C38—C20—C21—C22 | −96.4 (3) | O1'—C39'—C40'—C41' | 179.9 (2) |
C24—C20—C21—C22 | 18.8 (4) | O1'—C39'—C40'—S1' | 0.2 (3) |
C28—C20—C21—C22 | 139.4 (3) | C43'—S1'—C40'—C41' | 0.1 (2) |
C20—C21—C22—C23 | −18.8 (4) | C43'—S1'—C40'—C39' | 179.8 (2) |
C21—C22—C23—C24 | 12.0 (4) | C39'—C40'—C41'—C42' | −179.9 (2) |
C22—C23—C24—C25 | 176.3 (4) | S1'—C40'—C41'—C42' | −0.2 (4) |
C22—C23—C24—C20 | 0.4 (4) | C40'—C41'—C42'—C43' | 0.2 (4) |
C38—C20—C24—C23 | 103.8 (3) | C41'—C42'—C43'—S1' | −0.1 (3) |
C21—C20—C24—C23 | −12.4 (4) | C40'—S1'—C43'—C42' | 0.0 (2) |
C28—C20—C24—C23 | −137.9 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2n1···N1i | 0.86 | 2.23 | 2.909 (4) | 136 |
N3—H3n1···N11ii | 0.86 | 2.28 | 2.970 (4) | 138 |
N3—H3n2···N12ii | 0.86 | 2.29 | 3.042 (4) | 147 |
N8—H8n1···N7iii | 0.86 | 2.45 | 2.921 (4) | 115 |
N8—H8n2···N4iv | 0.86 | 2.31 | 3.006 (4) | 138 |
N9—H9n1···N5 | 0.86 | 2.39 | 3.098 (4) | 139 |
N9—H9n2···N6 | 0.86 | 2.35 | 3.178 (4) | 163 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, y−1, z; (iii) −x, −y+2, −z+1; (iv) −x, −y+1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C19H18N6·0.5C5H4OS |
Mr | 386.46 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 12.0181 (14), 13.8109 (15), 13.9000 (15) |
α, β, γ (°) | 60.703 (1), 77.841 (2), 89.879 (2) |
V (Å3) | 1953.1 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.14 |
Crystal size (mm) | 0.45 × 0.05 × 0.05 |
Data collection | |
Diffractometer | Bruker SMART APEX diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.942, 0.993 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 18784, 8916, 5141 |
Rint | 0.068 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.074, 0.216, 1.02 |
No. of reflections | 8916 |
No. of parameters | 571 |
No. of restraints | 94 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.59, −0.50 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2n1···N1i | 0.86 | 2.23 | 2.909 (4) | 136 |
N3—H3n1···N11ii | 0.86 | 2.28 | 2.970 (4) | 138 |
N3—H3n2···N12ii | 0.86 | 2.29 | 3.042 (4) | 147 |
N8—H8n1···N7iii | 0.86 | 2.45 | 2.921 (4) | 115 |
N8—H8n2···N4iv | 0.86 | 2.31 | 3.006 (4) | 138 |
N9—H9n1···N5 | 0.86 | 2.39 | 3.098 (4) | 139 |
N9—H9n2···N6 | 0.86 | 2.35 | 3.178 (4) | 163 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, y−1, z; (iii) −x, −y+2, −z+1; (iv) −x, −y+1, −z+2. |
Acknowledgements
We thank King Abdul Aziz University and the University of Malaya for supporting this study.
References
Asiri, A. M. (2003). Bull. Korean Chem. Soc. 24, 426–430. CAS Google Scholar
Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191. CrossRef CAS Google Scholar
Bruker (2009). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Nesterov, V. N. & Viltchinskaia, E. A. (2000). Acta Cryst. C56, 872–873. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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We have previously reported the condensation of cyclopentylidenemalononitrile and thiophene-2-carbaldehyde to form 2,5-bis(thienylidene)-1-dicyanomethylene-cyclopentane, a purple-colored compound suitable for application as a dye (Asiri, 2003). For reasons that we are not clear of, our attempted synthesis gave only colorless crystals. We examined a plate-like specimen and identified it as 6-amino-5,5,7-tricyano-3,3a,4,5- tetrahydro-2H-indene-4-spirocyclo-pentane, whose structure has already been reported (Nesterov & Viltchinskaia, 2000). We identified a prismatic specimen as the title 1: 0.5 co-crystal (Scheme I, Fig. 1); the second component is unchanged thiophene-2-carbaldehyde. The first component differs from the reported compound in having an aminodicyanovinyl group (along with a methine hydrogen) in place of the two cyano groups in the 5-position. Additionally, the compound has another cyano group in the 3a position.