organic compounds
ent-5α,3,15-Dioxodolabr-4(18)-ene-16,18-diol
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bDepartment of Chemistry, Faculty of Science, Prince of Songkla University, Hat-Yai, Songkhla 90112, Thailand, and cCrystal Materials Research Unit, Department of Chemistry, Faculty of Science, Prince of Songkla University, Hat-Yai, Songkhla 90112, Thailand
*Correspondence e-mail: hkfun@usm.my
The title compound, C20H30O4, is a dolabrane diterpenoid isolated from Ceriops tagal, in which one of the three fused cyclohexane rings adopts a half-chair conformation and the other two are in the standard chair conformations. The hydroxymethylidene substituent is attached to the half-chair cyclohexane. An intramolecular O—H⋯O hydrogen bond generate an S(6) ring motif. In the crystal, molecules are arranged into screw chains along the [001] direction. The crystal is stabilized by O—H⋯O hydrogen bonds and weaker C—H⋯O interactions.
Related literature
For hydrogen-bond motifs, see: Bernstein et al. (1995). For bond-length data, see: Allen et al. (1987). For ring conformations, see: Cremer & Pople (1975). For background to see, for example: Hu et al. (2010); Zhang et al. (2005). For related structures, see: Chantrapromma et al. (2007); Fun et al. (2006). For the stability of the temperature controller used in the data collection, see Cosier & Glazer, (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536810042078/fj2353sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810042078/fj2353Isup2.hkl
The air-dried and crushed stem barks of C. tagal (4.8 kg) were extracted with methylene chloride and then concentrated in vacuo to give a residue (17.4 g). This residue was subjected to quick
over silica gel using solvents of increasing polarity from hexane through 50% acetone/hexane. The eluates were collected and combined, based on TLC, to give 20 fractions (F1—F20). Fraction F14 was further purified by repeated quick with CH2Cl2/acetone (9:1 v/v) yielding title compound (30.4 mg). Colorless block-shaped single crystals of the title compound suitable for x-ray were recrystallized from hexane/CH2Cl2 (1:1, v/v) after several days, Mp. 395–396 K.All H atoms were placed in calculated positions with d(O—H) = 0.82 Å and d(C—H) = 0.93 Å for aromatic and CH, 0.97 for CH2 and 0.96 Å for CH3 atoms. The Uiso values were constrained to be 1.5Ueq of the
for hydroxy and methyl H atoms and 1.2Ueq for the remaining H atoms. A rotating group model was used for the methyl groups. The highest residual electron density peak is located at 0.18 Å from H1B and the deepest hole is located at 0.50 Å from O2. A total of 2024 Friedel pairs were merged before final as there is no large for the determination of the absolute configuration.Ceriops tagal (Perr.) C. B. Robinson is a mangrove plant belonging to the Rhizophoraceae family.
and are the main of C. tagal (Chantrapromma et al., 2007; Hu et al., 2010; Zhang et al., 2005). During the course of our studies on the chemical constituents and bioactive compounds from Thai medicinal plants, the title dolabrane diterpenoid compound (I), which is known as Tagalsin S (Hu et al., 2010), was isolated from the the stem barks of C. tagal. We have also previously reported the crystal structures of two diterpenoid compounds isolated from the same plant (Chantrapromma et al., 2007; Fun et al., 2006). We herein report the of (I).The molecule of the title compound contains a fused three-ring system A/B/C (Fig. 1). The A/B ring junction is θ = 111.0 (3)° and φ = 92.5 (4)°, rings B and C are in standard chair conformations (Cremer & Pople 1975). The hydroxylmethylidine substituent is planarly attached to cyclohexane ring A at atom C4 as indicated by the torsion angle C3—C4—C18—O2 of 4.4 (5)° and the bond angles around atom C4 are indicative of sp2 for this atom. The orientations of the carbonyl and alcohol substituent groups at atom C13 are described by the torsion angles C13–C15—C16—O4 = 166.3 (3)° and O3–C15–C16–O4 = -11.1 (5)°. Intramolecular O2—H1O2···O1 hydrogen bond (Table 1) generates S(6) ring motif (Fig. 1) (Bernstein et al., 1995). The bond distances are of normal values (Allen et al., 1987) and are comparable with the related structures (Chantrapromma et al., 2007; Fun et al., 2006).
-fused and B/C is trans-fused. The cyclohexane ring A adopts half-chair conformation with puckering parameters Q = 0.539 (3) Å,In the
(Fig. 2), the molecules are arranged into screw chains along the [0 0 1] direction and the adjacent chains are further linked by weak C—H···O interactions (Table 1). The crystal packing of (I) is stabilized by intermolecular O—H···O hydrogen bonds and weak C—H···O interactions (Fig. 2 and Table 1).For hydrogen-bond motifs, see: Bernstein et al. (1995). For bond-length data, see: Allen et al. (1987). For ring conformations, see: Cremer & Pople (1975). For background to
see, for example: Hu et al. (2010); Zhang et al. (2005). For related structures, see: Chantrapromma et al. (2007); Fun et al. (2006). For the stability of the temperature controller used in the data collection, see Cosier & Glazer, (1986).Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C20H30O4 | Dx = 1.249 Mg m−3 |
Mr = 334.44 | Melting point = 495–496 K |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 2691 reflections |
a = 7.9633 (3) Å | θ = 2.0–29.0° |
b = 10.7166 (4) Å | µ = 0.09 mm−1 |
c = 20.8338 (7) Å | T = 100 K |
V = 1777.95 (11) Å3 | Plate, colourless |
Z = 4 | 0.58 × 0.51 × 0.10 mm |
F(000) = 728 |
Bruker APEXII CCD area-detector diffractometer | 2691 independent reflections |
Radiation source: sealed tube | 2084 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
φ and ω scans | θmax = 29.0°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −10→10 |
Tmin = 0.952, Tmax = 0.992 | k = −14→10 |
20568 measured reflections | l = −24→28 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.052 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.157 | H-atom parameters constrained |
S = 1.09 | w = 1/[σ2(Fo2) + (0.077P)2 + 0.7994P] where P = (Fo2 + 2Fc2)/3 |
2691 reflections | (Δ/σ)max < 0.001 |
220 parameters | Δρmax = 0.31 e Å−3 |
0 restraints | Δρmin = −0.45 e Å−3 |
C20H30O4 | V = 1777.95 (11) Å3 |
Mr = 334.44 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 7.9633 (3) Å | µ = 0.09 mm−1 |
b = 10.7166 (4) Å | T = 100 K |
c = 20.8338 (7) Å | 0.58 × 0.51 × 0.10 mm |
Bruker APEXII CCD area-detector diffractometer | 2691 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 2084 reflections with I > 2σ(I) |
Tmin = 0.952, Tmax = 0.992 | Rint = 0.030 |
20568 measured reflections |
R[F2 > 2σ(F2)] = 0.052 | 0 restraints |
wR(F2) = 0.157 | H-atom parameters constrained |
S = 1.09 | Δρmax = 0.31 e Å−3 |
2691 reflections | Δρmin = −0.45 e Å−3 |
220 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.9767 (3) | 0.4254 (2) | 0.05460 (11) | 0.0420 (6) | |
O2 | 1.2362 (4) | 0.3517 (3) | 0.10215 (15) | 0.0633 (8) | |
H1O2 | 1.1724 | 0.3988 | 0.0830 | 0.095* | |
O3 | 0.5983 (4) | 0.4271 (2) | 0.41250 (10) | 0.0413 (6) | |
O4 | 0.6697 (4) | 0.3378 (2) | 0.52946 (11) | 0.0552 (8) | |
H1O4 | 0.6102 | 0.4000 | 0.5273 | 0.083* | |
C1 | 0.6196 (4) | 0.2200 (3) | 0.09423 (15) | 0.0360 (8) | |
H1A | 0.5759 | 0.1550 | 0.0665 | 0.043* | |
H1B | 0.5242 | 0.2658 | 0.1110 | 0.043* | |
C2 | 0.7243 (4) | 0.3092 (3) | 0.05327 (15) | 0.0379 (8) | |
H2A | 0.7218 | 0.2792 | 0.0094 | 0.045* | |
H2B | 0.6696 | 0.3900 | 0.0537 | 0.045* | |
C3 | 0.9026 (4) | 0.3276 (3) | 0.07172 (13) | 0.0294 (7) | |
C4 | 0.9885 (3) | 0.2325 (3) | 0.10845 (12) | 0.0221 (5) | |
C5 | 0.8927 (4) | 0.1186 (3) | 0.13108 (13) | 0.0230 (6) | |
C6 | 0.9782 (4) | 0.0532 (3) | 0.18765 (13) | 0.0301 (7) | |
H6A | 0.9239 | −0.0267 | 0.1947 | 0.036* | |
H6B | 1.0944 | 0.0370 | 0.1765 | 0.036* | |
C7 | 0.9731 (4) | 0.1276 (3) | 0.24997 (14) | 0.0272 (6) | |
H7A | 1.0337 | 0.2054 | 0.2446 | 0.033* | |
H7B | 1.0269 | 0.0805 | 0.2840 | 0.033* | |
C8 | 0.7911 (4) | 0.1547 (2) | 0.26801 (13) | 0.0226 (6) | |
H8A | 0.7344 | 0.0737 | 0.2708 | 0.027* | |
C9 | 0.6987 (3) | 0.2298 (2) | 0.21580 (13) | 0.0200 (5) | |
C10 | 0.7108 (4) | 0.1569 (3) | 0.15117 (13) | 0.0241 (6) | |
H10A | 0.6510 | 0.0783 | 0.1585 | 0.029* | |
C11 | 0.5122 (4) | 0.2385 (3) | 0.23683 (14) | 0.0318 (7) | |
H11A | 0.4514 | 0.2889 | 0.2059 | 0.038* | |
H11B | 0.4636 | 0.1555 | 0.2363 | 0.038* | |
C12 | 0.4884 (4) | 0.2955 (3) | 0.30434 (14) | 0.0338 (7) | |
H12A | 0.5200 | 0.3828 | 0.3030 | 0.041* | |
H12B | 0.3705 | 0.2912 | 0.3157 | 0.041* | |
C13 | 0.5915 (4) | 0.2302 (3) | 0.35673 (14) | 0.0276 (6) | |
C14 | 0.7769 (4) | 0.2146 (2) | 0.33451 (13) | 0.0227 (6) | |
H14A | 0.8305 | 0.2958 | 0.3336 | 0.027* | |
H14B | 0.8364 | 0.1633 | 0.3654 | 0.027* | |
C15 | 0.6017 (4) | 0.3139 (3) | 0.41616 (14) | 0.0290 (6) | |
C16 | 0.6242 (5) | 0.2539 (3) | 0.48109 (14) | 0.0394 (8) | |
H16A | 0.5201 | 0.2133 | 0.4932 | 0.047* | |
H16B | 0.7100 | 0.1900 | 0.4778 | 0.047* | |
C17 | 0.5129 (5) | 0.1042 (3) | 0.37320 (18) | 0.0463 (9) | |
H17A | 0.4050 | 0.1172 | 0.3926 | 0.070* | |
H17B | 0.5844 | 0.0603 | 0.4026 | 0.070* | |
H17C | 0.4998 | 0.0559 | 0.3347 | 0.070* | |
C18 | 1.1538 (4) | 0.2500 (3) | 0.11951 (15) | 0.0342 (7) | |
H18A | 1.2130 | 0.1872 | 0.1404 | 0.041* | |
C19 | 0.8839 (5) | 0.0238 (3) | 0.07522 (15) | 0.0352 (7) | |
H19A | 0.9938 | −0.0099 | 0.0674 | 0.053* | |
H19B | 0.8441 | 0.0649 | 0.0372 | 0.053* | |
H19C | 0.8085 | −0.0427 | 0.0864 | 0.053* | |
C20 | 0.7677 (4) | 0.3630 (2) | 0.21044 (13) | 0.0236 (6) | |
H20A | 0.7370 | 0.4095 | 0.2480 | 0.035* | |
H20B | 0.7213 | 0.4026 | 0.1731 | 0.035* | |
H20C | 0.8878 | 0.3602 | 0.2068 | 0.035* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0564 (16) | 0.0328 (12) | 0.0369 (12) | 0.0036 (12) | 0.0098 (12) | 0.0126 (10) |
O2 | 0.0435 (16) | 0.0705 (19) | 0.076 (2) | −0.0151 (15) | 0.0071 (15) | 0.0049 (17) |
O3 | 0.0643 (16) | 0.0281 (11) | 0.0314 (11) | 0.0050 (12) | −0.0030 (12) | −0.0080 (10) |
O4 | 0.088 (2) | 0.0437 (14) | 0.0337 (12) | 0.0225 (15) | −0.0180 (13) | −0.0096 (11) |
C1 | 0.0222 (14) | 0.056 (2) | 0.0301 (15) | 0.0036 (14) | −0.0107 (12) | −0.0167 (15) |
C2 | 0.0410 (19) | 0.0438 (19) | 0.0290 (16) | 0.0139 (16) | −0.0147 (14) | −0.0040 (14) |
C3 | 0.0375 (16) | 0.0331 (16) | 0.0177 (13) | 0.0076 (14) | 0.0011 (12) | 0.0008 (12) |
C4 | 0.0231 (13) | 0.0252 (13) | 0.0180 (12) | 0.0007 (11) | −0.0014 (10) | −0.0005 (10) |
C5 | 0.0233 (13) | 0.0212 (13) | 0.0245 (13) | 0.0021 (11) | −0.0020 (11) | −0.0020 (10) |
C6 | 0.0374 (17) | 0.0228 (14) | 0.0303 (14) | 0.0123 (13) | 0.0022 (13) | 0.0022 (12) |
C7 | 0.0310 (15) | 0.0272 (14) | 0.0232 (12) | 0.0127 (13) | −0.0015 (12) | 0.0032 (11) |
C8 | 0.0289 (14) | 0.0133 (11) | 0.0254 (13) | 0.0001 (11) | 0.0041 (11) | 0.0011 (10) |
C9 | 0.0154 (11) | 0.0198 (12) | 0.0248 (13) | −0.0013 (10) | −0.0024 (10) | −0.0051 (11) |
C10 | 0.0212 (13) | 0.0241 (14) | 0.0269 (14) | −0.0030 (11) | −0.0016 (11) | −0.0068 (12) |
C11 | 0.0190 (13) | 0.0440 (18) | 0.0325 (16) | −0.0016 (13) | −0.0016 (11) | −0.0148 (14) |
C12 | 0.0187 (14) | 0.0483 (18) | 0.0345 (15) | 0.0004 (14) | 0.0012 (12) | −0.0138 (14) |
C13 | 0.0288 (14) | 0.0250 (14) | 0.0290 (14) | −0.0062 (13) | 0.0068 (12) | −0.0070 (12) |
C14 | 0.0293 (14) | 0.0145 (12) | 0.0242 (13) | 0.0027 (11) | 0.0002 (11) | 0.0009 (10) |
C15 | 0.0265 (14) | 0.0320 (15) | 0.0286 (15) | 0.0014 (13) | 0.0044 (12) | −0.0051 (12) |
C16 | 0.050 (2) | 0.0347 (17) | 0.0333 (18) | 0.0056 (17) | 0.0005 (15) | −0.0039 (15) |
C17 | 0.057 (2) | 0.0367 (18) | 0.0451 (19) | −0.0219 (17) | 0.0195 (18) | −0.0115 (15) |
C18 | 0.0254 (14) | 0.0401 (18) | 0.0372 (17) | −0.0031 (14) | −0.0048 (13) | 0.0034 (15) |
C19 | 0.0434 (19) | 0.0287 (15) | 0.0335 (16) | 0.0018 (15) | 0.0058 (15) | −0.0086 (13) |
C20 | 0.0285 (14) | 0.0170 (12) | 0.0253 (13) | 0.0036 (11) | −0.0081 (11) | −0.0002 (11) |
O1—C3 | 1.254 (4) | C9—C20 | 1.534 (4) |
O2—C18 | 1.323 (4) | C9—C11 | 1.551 (4) |
O2—H1O2 | 0.8200 | C9—C10 | 1.560 (4) |
O3—C15 | 1.216 (4) | C10—H10A | 0.9800 |
O4—C16 | 1.398 (4) | C11—C12 | 1.545 (4) |
O4—H1O4 | 0.8200 | C11—H11A | 0.9700 |
C1—C2 | 1.529 (5) | C11—H11B | 0.9700 |
C1—C10 | 1.547 (4) | C12—C13 | 1.535 (4) |
C1—H1A | 0.9700 | C12—H12A | 0.9700 |
C1—H1B | 0.9700 | C12—H12B | 0.9700 |
C2—C3 | 1.484 (5) | C13—C17 | 1.527 (4) |
C2—H2A | 0.9700 | C13—C15 | 1.531 (4) |
C2—H2B | 0.9700 | C13—C14 | 1.556 (4) |
C3—C4 | 1.446 (4) | C14—H14A | 0.9700 |
C4—C18 | 1.350 (4) | C14—H14B | 0.9700 |
C4—C5 | 1.515 (4) | C15—C16 | 1.508 (4) |
C5—C6 | 1.531 (4) | C16—H16A | 0.9700 |
C5—C19 | 1.547 (4) | C16—H16B | 0.9700 |
C5—C10 | 1.563 (4) | C17—H17A | 0.9600 |
C6—C7 | 1.525 (4) | C17—H17B | 0.9600 |
C6—H6A | 0.9700 | C17—H17C | 0.9600 |
C6—H6B | 0.9700 | C18—H18A | 0.9300 |
C7—C8 | 1.525 (4) | C19—H19A | 0.9600 |
C7—H7A | 0.9700 | C19—H19B | 0.9600 |
C7—H7B | 0.9700 | C19—H19C | 0.9600 |
C8—C14 | 1.531 (4) | C20—H20A | 0.9600 |
C8—C9 | 1.540 (4) | C20—H20B | 0.9600 |
C8—H8A | 0.9800 | C20—H20C | 0.9600 |
C18—O2—H1O2 | 109.5 | C5—C10—H10A | 105.5 |
C16—O4—H1O4 | 109.5 | C12—C11—C9 | 113.5 (2) |
C2—C1—C10 | 116.4 (3) | C12—C11—H11A | 108.9 |
C2—C1—H1A | 108.2 | C9—C11—H11A | 108.9 |
C10—C1—H1A | 108.2 | C12—C11—H11B | 108.9 |
C2—C1—H1B | 108.2 | C9—C11—H11B | 108.9 |
C10—C1—H1B | 108.2 | H11A—C11—H11B | 107.7 |
H1A—C1—H1B | 107.3 | C13—C12—C11 | 113.7 (3) |
C3—C2—C1 | 117.4 (3) | C13—C12—H12A | 108.8 |
C3—C2—H2A | 107.9 | C11—C12—H12A | 108.8 |
C1—C2—H2A | 107.9 | C13—C12—H12B | 108.8 |
C3—C2—H2B | 107.9 | C11—C12—H12B | 108.8 |
C1—C2—H2B | 107.9 | H12A—C12—H12B | 107.7 |
H2A—C2—H2B | 107.2 | C17—C13—C15 | 111.0 (2) |
O1—C3—C4 | 121.1 (3) | C17—C13—C12 | 110.1 (3) |
O1—C3—C2 | 119.2 (3) | C15—C13—C12 | 109.7 (2) |
C4—C3—C2 | 119.7 (3) | C17—C13—C14 | 111.2 (3) |
C18—C4—C3 | 117.0 (3) | C15—C13—C14 | 104.7 (2) |
C18—C4—C5 | 123.4 (3) | C12—C13—C14 | 110.2 (2) |
C3—C4—C5 | 119.6 (3) | C8—C14—C13 | 112.6 (2) |
C4—C5—C6 | 112.6 (2) | C8—C14—H14A | 109.1 |
C4—C5—C19 | 108.5 (2) | C13—C14—H14A | 109.1 |
C6—C5—C19 | 107.4 (2) | C8—C14—H14B | 109.1 |
C4—C5—C10 | 109.8 (2) | C13—C14—H14B | 109.1 |
C6—C5—C10 | 109.0 (2) | H14A—C14—H14B | 107.8 |
C19—C5—C10 | 109.4 (2) | O3—C15—C16 | 118.9 (3) |
C7—C6—C5 | 113.8 (2) | O3—C15—C13 | 122.2 (3) |
C7—C6—H6A | 108.8 | C16—C15—C13 | 118.8 (3) |
C5—C6—H6A | 108.8 | O4—C16—C15 | 113.8 (3) |
C7—C6—H6B | 108.8 | O4—C16—H16A | 108.8 |
C5—C6—H6B | 108.8 | C15—C16—H16A | 108.8 |
H6A—C6—H6B | 107.7 | O4—C16—H16B | 108.8 |
C6—C7—C8 | 109.5 (3) | C15—C16—H16B | 108.8 |
C6—C7—H7A | 109.8 | H16A—C16—H16B | 107.7 |
C8—C7—H7A | 109.8 | C13—C17—H17A | 109.5 |
C6—C7—H7B | 109.8 | C13—C17—H17B | 109.5 |
C8—C7—H7B | 109.8 | H17A—C17—H17B | 109.5 |
H7A—C7—H7B | 108.2 | C13—C17—H17C | 109.5 |
C7—C8—C14 | 111.9 (2) | H17A—C17—H17C | 109.5 |
C7—C8—C9 | 112.3 (2) | H17B—C17—H17C | 109.5 |
C14—C8—C9 | 112.6 (2) | O2—C18—C4 | 123.4 (3) |
C7—C8—H8A | 106.5 | O2—C18—H18A | 118.3 |
C14—C8—H8A | 106.5 | C4—C18—H18A | 118.3 |
C9—C8—H8A | 106.5 | C5—C19—H19A | 109.5 |
C20—C9—C8 | 111.5 (2) | C5—C19—H19B | 109.5 |
C20—C9—C11 | 107.9 (2) | H19A—C19—H19B | 109.5 |
C8—C9—C11 | 106.8 (2) | C5—C19—H19C | 109.5 |
C20—C9—C10 | 112.4 (2) | H19A—C19—H19C | 109.5 |
C8—C9—C10 | 108.6 (2) | H19B—C19—H19C | 109.5 |
C11—C9—C10 | 109.5 (2) | C9—C20—H20A | 109.5 |
C1—C10—C9 | 114.5 (2) | C9—C20—H20B | 109.5 |
C1—C10—C5 | 110.2 (2) | H20A—C20—H20B | 109.5 |
C9—C10—C5 | 114.9 (2) | C9—C20—H20C | 109.5 |
C1—C10—H10A | 105.5 | H20A—C20—H20C | 109.5 |
C9—C10—H10A | 105.5 | H20B—C20—H20C | 109.5 |
C10—C1—C2—C3 | −0.2 (4) | C8—C9—C10—C5 | −52.4 (3) |
C1—C2—C3—O1 | −157.0 (3) | C11—C9—C10—C5 | −168.7 (3) |
C1—C2—C3—C4 | 23.7 (4) | C4—C5—C10—C1 | 57.8 (3) |
O1—C3—C4—C18 | −4.4 (4) | C6—C5—C10—C1 | −178.4 (2) |
C2—C3—C4—C18 | 175.0 (3) | C19—C5—C10—C1 | −61.2 (3) |
O1—C3—C4—C5 | 177.0 (2) | C4—C5—C10—C9 | −73.3 (3) |
C2—C3—C4—C5 | −3.6 (4) | C6—C5—C10—C9 | 50.6 (3) |
C18—C4—C5—C6 | 22.3 (4) | C19—C5—C10—C9 | 167.7 (2) |
C3—C4—C5—C6 | −159.2 (2) | C20—C9—C11—C12 | −64.2 (3) |
C18—C4—C5—C19 | −96.4 (3) | C8—C9—C11—C12 | 55.8 (3) |
C3—C4—C5—C19 | 82.1 (3) | C10—C9—C11—C12 | 173.2 (3) |
C18—C4—C5—C10 | 144.0 (3) | C9—C11—C12—C13 | −53.6 (4) |
C3—C4—C5—C10 | −37.5 (3) | C11—C12—C13—C17 | −74.3 (3) |
C4—C5—C6—C7 | 69.2 (3) | C11—C12—C13—C15 | 163.3 (3) |
C19—C5—C6—C7 | −171.3 (3) | C11—C12—C13—C14 | 48.6 (3) |
C10—C5—C6—C7 | −52.9 (3) | C7—C8—C14—C13 | −174.0 (2) |
C5—C6—C7—C8 | 58.1 (3) | C9—C8—C14—C13 | 58.3 (3) |
C6—C7—C8—C14 | 172.7 (2) | C17—C13—C14—C8 | 71.3 (3) |
C6—C7—C8—C9 | −59.5 (3) | C15—C13—C14—C8 | −168.8 (2) |
C7—C8—C9—C20 | −68.1 (3) | C12—C13—C14—C8 | −51.0 (3) |
C14—C8—C9—C20 | 59.3 (3) | C17—C13—C15—O3 | −151.8 (4) |
C7—C8—C9—C11 | 174.2 (2) | C12—C13—C15—O3 | −30.0 (4) |
C14—C8—C9—C11 | −58.4 (3) | C14—C13—C15—O3 | 88.2 (4) |
C7—C8—C9—C10 | 56.2 (3) | C17—C13—C15—C16 | 31.0 (4) |
C14—C8—C9—C10 | −176.4 (2) | C12—C13—C15—C16 | 152.8 (3) |
C2—C1—C10—C9 | 91.3 (3) | C14—C13—C15—C16 | −89.0 (3) |
C2—C1—C10—C5 | −40.0 (3) | O3—C15—C16—O4 | −11.1 (5) |
C20—C9—C10—C1 | −57.5 (3) | C13—C15—C16—O4 | 166.3 (3) |
C8—C9—C10—C1 | 178.7 (2) | C3—C4—C18—O2 | 4.4 (5) |
C11—C9—C10—C1 | 62.4 (3) | C5—C4—C18—O2 | −177.1 (3) |
C20—C9—C10—C5 | 71.4 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···O1 | 0.82 | 1.69 | 2.424 (4) | 148 |
O4—H1O4···O1i | 0.82 | 2.07 | 2.841 (3) | 156 |
C1—H1B···O2ii | 0.97 | 2.48 | 3.368 (5) | 152 |
C12—H12A···O3 | 0.97 | 2.41 | 2.799 (4) | 103 |
C17—H17A···O4iii | 0.96 | 2.53 | 3.460 (5) | 164 |
Symmetry codes: (i) −x+3/2, −y+1, z+1/2; (ii) x−1, y, z; (iii) x−1/2, −y+1/2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C20H30O4 |
Mr | 334.44 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 100 |
a, b, c (Å) | 7.9633 (3), 10.7166 (4), 20.8338 (7) |
V (Å3) | 1777.95 (11) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.58 × 0.51 × 0.10 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.952, 0.992 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 20568, 2691, 2084 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.682 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.052, 0.157, 1.09 |
No. of reflections | 2691 |
No. of parameters | 220 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.31, −0.45 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···O1 | 0.82 | 1.69 | 2.424 (4) | 148 |
O4—H1O4···O1i | 0.82 | 2.07 | 2.841 (3) | 156 |
C1—H1B···O2ii | 0.97 | 2.48 | 3.368 (5) | 152 |
C12—H12A···O3 | 0.97 | 2.41 | 2.799 (4) | 103 |
C17—H17A···O4iii | 0.96 | 2.53 | 3.460 (5) | 164 |
Symmetry codes: (i) −x+3/2, −y+1, z+1/2; (ii) x−1, y, z; (iii) x−1/2, −y+1/2, −z+1. |
Acknowledgements
The authors thank the Prince of Songkla University for financial support through the Crystal Materials Research Unit. The authors also thank Universiti Sains Malaysia for the Research University Grant No. 1001/PFIZIK/811160.
References
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19. CSD CrossRef Web of Science Google Scholar
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
Bruker (2005). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Chantrapromma, S., Fun, H.-K., Pakhathirathien, C., Karalai, C. & Chantrapromma, K. (2007). Acta Cryst. E63, o459–o461. Web of Science CSD CrossRef IUCr Journals Google Scholar
Cosier, J. & Glazer, A. M. (1986). J. Appl. Cryst. 19, 105–107. CrossRef CAS Web of Science IUCr Journals Google Scholar
Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354–1358. CrossRef CAS Web of Science Google Scholar
Fun, H.-K., Pakhathirathien, C., Chantrapromma, S., Karalai, C. & Chantrapromma, K. (2006). Acta Cryst. E62, o5539–o5541. Web of Science CSD CrossRef IUCr Journals Google Scholar
Hu, W.-M., Li, M.-Y., Li, J., Xiao, Q., Feng, G. & Wu, J. (2010). J. Nat. Prod. In the press. doi:10.1021/np100484w. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Zhang, Y., Deng, Z., Gao, T., Proksch, P. & Lin, W. (2005). Phytochemistry, 66, 1465–1471. Web of Science CrossRef PubMed CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Ceriops tagal (Perr.) C. B. Robinson is a mangrove plant belonging to the Rhizophoraceae family. Diterpenoids and triterpenoids are the main secondary metabolites of C. tagal (Chantrapromma et al., 2007; Hu et al., 2010; Zhang et al., 2005). During the course of our studies on the chemical constituents and bioactive compounds from Thai medicinal plants, the title dolabrane diterpenoid compound (I), which is known as Tagalsin S (Hu et al., 2010), was isolated from the the stem barks of C. tagal. We have also previously reported the crystal structures of two diterpenoid compounds isolated from the same plant (Chantrapromma et al., 2007; Fun et al., 2006). We herein report the crystal structure of (I).
The molecule of the title compound contains a fused three-ring system A/B/C (Fig. 1). The A/B ring junction is cis-fused and B/C is trans-fused. The cyclohexane ring A adopts half-chair conformation with puckering parameters Q = 0.539 (3) Å, θ = 111.0 (3)° and φ = 92.5 (4)°, rings B and C are in standard chair conformations (Cremer & Pople 1975). The hydroxylmethylidine substituent is planarly attached to cyclohexane ring A at atom C4 as indicated by the torsion angle C3—C4—C18—O2 of 4.4 (5)° and the bond angles around atom C4 are indicative of sp2 hybridization for this atom. The orientations of the carbonyl and alcohol substituent groups at atom C13 are described by the torsion angles C13–C15—C16—O4 = 166.3 (3)° and O3–C15–C16–O4 = -11.1 (5)°. Intramolecular O2—H1O2···O1 hydrogen bond (Table 1) generates S(6) ring motif (Fig. 1) (Bernstein et al., 1995). The bond distances are of normal values (Allen et al., 1987) and are comparable with the related structures (Chantrapromma et al., 2007; Fun et al., 2006).
In the crystal structure (Fig. 2), the molecules are arranged into screw chains along the [0 0 1] direction and the adjacent chains are further linked by weak C—H···O interactions (Table 1). The crystal packing of (I) is stabilized by intermolecular O—H···O hydrogen bonds and weak C—H···O interactions (Fig. 2 and Table 1).