organic compounds
2-Cyanoquinolin-1-ium hydrogen sulfate
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
The title salt, C10H7N2+·HSO4−, is formed by the transfer of a proton from H2SO4 to the N atom of 2-cyanoquinoline during crystallization. The quinoline ring system is approximately planar with a maximum deviation of 0.013 (3) Å. In the crystal, the cations are linked to the anions via intermolecular N—H⋯O, O—H⋯O and C—H⋯O hydrogen bonds, forming a layered network.
Related literature
For background to and the biological activity of quinoline derivatives, see: Loh et al. (2010a,b); Sasaki et al. (1998); Reux et al. (2009); Morimoto et al. (1991); Michael (1997); Markees et al. (1970); Campbell et al. (1988). For related structures, see: Loh et al. (2010a,b). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986). For bond-length data, see: Allen et al. (1987).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S160053681003878X/hb5657sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S160053681003878X/hb5657Isup2.hkl
A few drops of sulfuric acid were added to a hot methanol solution (20 ml) of quinoline-2-carbonitrile (39 mg, Aldrich) which had been warmed over a magnetic stirrer hotplate for a few minutes. The resulting solution was allowed to cool slowly to room temperature. Colourless blocks of (I) appeared after a few days.
All H atoms were located from a difference Fourier map and refined freely with the bond lengths of C–H being 0.91 (3) to 0.99 (3) Å, N–H being 0.98 (5) Å and O–H being 0.67 (5) Å.
Recently, hydrogen-bonding patterns involving quinoline and its derivatives with organic acid have been investigated (Loh at al., 2010a,b). Syntheses of the quinoline derivatives were discussed earlier (Sasaki et al., 1998; Reux et al., 2009). Quinolines and their derivatives are very important compounds because of their wide occurrence in natural products (Morimoto et al., 1991; Michael, 1997) and biologically active compounds (Markees et al., 1970; Campbell et al., 1988). Heterocyclic molecules containing cyano group are useful as drug intermediates. Herein we report the synthesis of 2-cyanoquinolin-1-ium hydrogen sulfate.
The
of the title compound (Fig. 1) consists of one 2-cyanoquinolin-1-ium cation (C1–C10/N1/N2) and one hydrogen sulfate anion (O1–O4/S1). One proton is transferred from the hydroxyl group of hydrogen sulfate to the atom N1 of 2-cyanoquinoline during the crystallization, resulting in the formation of salt. The quinoline ring system (C1–C9/N1) is approximately planar with a maximum deviation of 0.013 (3) Å at atom C6. Bond lengths (Allen et al., 1987) and angles are within the normal ranges and are comparable to the related structures (Loh et al., 2010a,b).In the crystal (Fig. 2), the cations are linked by the anions via intermolecular N1—H1N1···O1, O4—H1O4···O2, C2—H2A···O2, C5—H5A···O4, C7—H7A···O3 and C8—H8A···O2 hydrogen bonds (Table 1) into a two-dimensional networks.
For background to and the biological activity of quinoline derivatives, see: Loh et al. (2010a,b); Sasaki et al. (1998); Reux et al. (2009); Morimoto et al. (1991); Michael (1997); Markees et al. (1970); Campbell et al. (1988). For related structures, see: Loh et al. (2010a,b). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986). For bond-length data, see: Allen et al. (1987).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of (I) showing 50% probability displacement ellipsoids for non-H atoms. | |
Fig. 2. The crystal structure of (I), viewed along the c axis. |
C10H7N2+·HSO4− | Z = 2 |
Mr = 252.24 | F(000) = 260 |
Triclinic, P1 | Dx = 1.634 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.2154 (3) Å | Cell parameters from 2998 reflections |
b = 8.2334 (4) Å | θ = 2.2–27.6° |
c = 9.9985 (4) Å | µ = 0.32 mm−1 |
α = 110.622 (2)° | T = 100 K |
β = 90.982 (3)° | Block, colourless |
γ = 110.791 (2)° | 0.34 × 0.19 × 0.12 mm |
V = 512.82 (4) Å3 |
Bruker SMART APEXII CCD diffractometer | 1979 independent reflections |
Radiation source: fine-focus sealed tube | 1721 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.032 |
φ and ω scans | θmax = 26.0°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −8→6 |
Tmin = 0.900, Tmax = 0.963 | k = −10→10 |
5740 measured reflections | l = −12→12 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.051 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.154 | All H-atom parameters refined |
S = 1.11 | w = 1/[σ2(Fo2) + (0.0884P)2 + 0.5522P] where P = (Fo2 + 2Fc2)/3 |
1979 reflections | (Δ/σ)max < 0.001 |
186 parameters | Δρmax = 0.82 e Å−3 |
0 restraints | Δρmin = −0.56 e Å−3 |
C10H7N2+·HSO4− | γ = 110.791 (2)° |
Mr = 252.24 | V = 512.82 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.2154 (3) Å | Mo Kα radiation |
b = 8.2334 (4) Å | µ = 0.32 mm−1 |
c = 9.9985 (4) Å | T = 100 K |
α = 110.622 (2)° | 0.34 × 0.19 × 0.12 mm |
β = 90.982 (3)° |
Bruker SMART APEXII CCD diffractometer | 1979 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 1721 reflections with I > 2σ(I) |
Tmin = 0.900, Tmax = 0.963 | Rint = 0.032 |
5740 measured reflections |
R[F2 > 2σ(F2)] = 0.051 | 0 restraints |
wR(F2) = 0.154 | All H-atom parameters refined |
S = 1.11 | Δρmax = 0.82 e Å−3 |
1979 reflections | Δρmin = −0.56 e Å−3 |
186 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.15454 (10) | 0.99553 (10) | 0.33365 (7) | 0.0141 (3) | |
O1 | 0.3450 (3) | 1.0495 (3) | 0.4227 (2) | 0.0216 (5) | |
O2 | 0.0561 (3) | 1.1258 (3) | 0.3966 (2) | 0.0184 (5) | |
O3 | 0.1678 (3) | 0.9584 (3) | 0.1832 (2) | 0.0199 (5) | |
O4 | 0.0149 (3) | 0.8001 (3) | 0.3345 (3) | 0.0213 (5) | |
N1 | 0.5709 (4) | 0.3044 (3) | 0.6749 (3) | 0.0153 (5) | |
N2 | 0.7421 (5) | 0.4421 (4) | 0.4025 (3) | 0.0341 (8) | |
C1 | 0.5498 (4) | 0.2853 (4) | 0.8046 (3) | 0.0146 (6) | |
C2 | 0.3903 (4) | 0.1311 (4) | 0.8119 (3) | 0.0171 (6) | |
C3 | 0.3736 (5) | 0.1152 (4) | 0.9439 (3) | 0.0176 (6) | |
C4 | 0.5161 (4) | 0.2496 (4) | 1.0697 (3) | 0.0178 (7) | |
C5 | 0.6693 (4) | 0.3999 (4) | 1.0632 (3) | 0.0157 (6) | |
C6 | 0.6915 (4) | 0.4236 (4) | 0.9298 (3) | 0.0151 (6) | |
C7 | 0.8438 (4) | 0.5775 (4) | 0.9151 (3) | 0.0161 (6) | |
C8 | 0.8587 (4) | 0.5909 (4) | 0.7818 (3) | 0.0164 (6) | |
C9 | 0.7188 (4) | 0.4485 (4) | 0.6622 (3) | 0.0171 (6) | |
C10 | 0.7297 (5) | 0.4459 (4) | 0.5172 (3) | 0.0224 (7) | |
H2A | 0.305 (5) | 0.040 (5) | 0.730 (4) | 0.017 (8)* | |
H3A | 0.266 (5) | 0.008 (5) | 0.947 (4) | 0.018 (8)* | |
H4A | 0.493 (5) | 0.226 (5) | 1.157 (4) | 0.025 (9)* | |
H5A | 0.767 (4) | 0.498 (4) | 1.148 (3) | 0.008 (7)* | |
H7A | 0.933 (5) | 0.672 (5) | 0.999 (4) | 0.016 (8)* | |
H8A | 0.964 (5) | 0.696 (5) | 0.767 (4) | 0.015 (8)* | |
H1N1 | 0.474 (6) | 0.211 (6) | 0.589 (5) | 0.045 (11)* | |
H1O4 | −0.005 (7) | 0.814 (7) | 0.402 (5) | 0.040 (14)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0155 (4) | 0.0150 (4) | 0.0056 (4) | 0.0016 (3) | −0.0029 (3) | 0.0015 (3) |
O1 | 0.0213 (11) | 0.0246 (12) | 0.0092 (10) | 0.0065 (9) | −0.0058 (8) | −0.0016 (9) |
O2 | 0.0221 (11) | 0.0209 (11) | 0.0133 (10) | 0.0093 (9) | 0.0018 (8) | 0.0069 (9) |
O3 | 0.0229 (11) | 0.0231 (12) | 0.0058 (10) | 0.0025 (9) | 0.0009 (8) | 0.0031 (9) |
O4 | 0.0286 (13) | 0.0204 (12) | 0.0079 (11) | 0.0045 (10) | 0.0005 (9) | 0.0028 (10) |
N1 | 0.0176 (13) | 0.0158 (13) | 0.0088 (12) | 0.0046 (10) | −0.0020 (10) | 0.0025 (10) |
N2 | 0.0415 (18) | 0.0289 (16) | 0.0134 (14) | −0.0059 (14) | −0.0036 (12) | 0.0070 (12) |
C1 | 0.0183 (15) | 0.0194 (15) | 0.0080 (13) | 0.0100 (12) | 0.0014 (11) | 0.0047 (12) |
C2 | 0.0155 (14) | 0.0167 (15) | 0.0130 (15) | 0.0041 (12) | −0.0030 (12) | 0.0013 (12) |
C3 | 0.0175 (15) | 0.0185 (16) | 0.0148 (15) | 0.0047 (13) | −0.0003 (12) | 0.0066 (13) |
C4 | 0.0218 (16) | 0.0229 (16) | 0.0113 (15) | 0.0116 (13) | 0.0031 (12) | 0.0063 (13) |
C5 | 0.0183 (15) | 0.0199 (15) | 0.0079 (14) | 0.0094 (13) | −0.0005 (11) | 0.0023 (12) |
C6 | 0.0159 (14) | 0.0145 (15) | 0.0122 (14) | 0.0051 (12) | −0.0019 (11) | 0.0030 (12) |
C7 | 0.0197 (15) | 0.0157 (15) | 0.0093 (14) | 0.0073 (12) | −0.0016 (12) | 0.0004 (12) |
C8 | 0.0154 (14) | 0.0162 (15) | 0.0134 (14) | 0.0033 (12) | −0.0013 (11) | 0.0039 (12) |
C9 | 0.0209 (15) | 0.0182 (15) | 0.0113 (14) | 0.0069 (12) | 0.0007 (11) | 0.0055 (12) |
C10 | 0.0259 (17) | 0.0183 (16) | 0.0134 (16) | 0.0001 (13) | −0.0026 (12) | 0.0040 (13) |
S1—O3 | 1.438 (2) | C3—C4 | 1.425 (4) |
S1—O1 | 1.457 (2) | C3—H3A | 0.96 (3) |
S1—O2 | 1.460 (2) | C4—C5 | 1.358 (4) |
S1—O4 | 1.570 (2) | C4—H4A | 0.96 (4) |
O4—H1O4 | 0.67 (5) | C5—C6 | 1.418 (4) |
N1—C9 | 1.333 (4) | C5—H5A | 0.98 (3) |
N1—C1 | 1.365 (4) | C6—C7 | 1.408 (4) |
N1—H1N1 | 0.98 (5) | C7—C8 | 1.378 (4) |
N2—C10 | 1.142 (4) | C7—H7A | 0.95 (4) |
C1—C2 | 1.404 (4) | C8—C9 | 1.398 (4) |
C1—C6 | 1.426 (4) | C8—H8A | 0.99 (3) |
C2—C3 | 1.375 (4) | C9—C10 | 1.446 (4) |
C2—H2A | 0.91 (3) | ||
O3—S1—O1 | 113.75 (13) | C5—C4—C3 | 120.9 (3) |
O3—S1—O2 | 113.56 (12) | C5—C4—H4A | 124 (2) |
O1—S1—O2 | 111.77 (12) | C3—C4—H4A | 115 (2) |
O3—S1—O4 | 104.10 (13) | C4—C5—C6 | 120.2 (3) |
O1—S1—O4 | 105.98 (13) | C4—C5—H5A | 123.1 (17) |
O2—S1—O4 | 106.81 (13) | C6—C5—H5A | 116.7 (17) |
S1—O4—H1O4 | 108 (4) | C7—C6—C5 | 123.5 (3) |
C9—N1—C1 | 122.0 (2) | C7—C6—C1 | 118.5 (3) |
C9—N1—H1N1 | 119 (3) | C5—C6—C1 | 118.0 (3) |
C1—N1—H1N1 | 119 (3) | C8—C7—C6 | 120.6 (3) |
N1—C1—C2 | 119.6 (3) | C8—C7—H7A | 121 (2) |
N1—C1—C6 | 118.8 (3) | C6—C7—H7A | 118 (2) |
C2—C1—C6 | 121.7 (3) | C7—C8—C9 | 118.4 (3) |
C3—C2—C1 | 118.2 (3) | C7—C8—H8A | 122.8 (19) |
C3—C2—H2A | 121 (2) | C9—C8—H8A | 118.8 (19) |
C1—C2—H2A | 121 (2) | N1—C9—C8 | 121.7 (3) |
C2—C3—C4 | 121.0 (3) | N1—C9—C10 | 116.2 (3) |
C2—C3—H3A | 117 (2) | C8—C9—C10 | 122.1 (3) |
C4—C3—H3A | 121 (2) | N2—C10—C9 | 178.2 (4) |
C9—N1—C1—C2 | 179.6 (3) | C2—C1—C6—C7 | −178.0 (3) |
C9—N1—C1—C6 | −0.5 (4) | N1—C1—C6—C5 | −179.0 (2) |
N1—C1—C2—C3 | 179.7 (3) | C2—C1—C6—C5 | 1.0 (4) |
C6—C1—C2—C3 | −0.3 (4) | C5—C6—C7—C8 | 179.2 (3) |
C1—C2—C3—C4 | −1.1 (5) | C1—C6—C7—C8 | −1.9 (4) |
C2—C3—C4—C5 | 1.8 (5) | C6—C7—C8—C9 | 0.2 (4) |
C3—C4—C5—C6 | −1.1 (4) | C1—N1—C9—C8 | −1.4 (4) |
C4—C5—C6—C7 | 178.7 (3) | C1—N1—C9—C10 | 176.8 (3) |
C4—C5—C6—C1 | −0.3 (4) | C7—C8—C9—N1 | 1.5 (5) |
N1—C1—C6—C7 | 2.0 (4) | C7—C8—C9—C10 | −176.6 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N1···O1i | 0.98 (5) | 1.71 (5) | 2.669 (3) | 169 (4) |
O4—H1O4···O2ii | 0.67 (5) | 1.97 (5) | 2.641 (3) | 176 (7) |
C2—H2A···O2iii | 0.91 (4) | 2.53 (4) | 3.320 (4) | 145 (3) |
C5—H5A···O4iv | 0.98 (3) | 2.52 (3) | 3.475 (4) | 166 (3) |
C7—H7A···O3iv | 0.94 (4) | 2.41 (4) | 3.338 (4) | 167 (3) |
C8—H8A···O2v | 0.99 (4) | 2.59 (4) | 3.309 (4) | 130 (3) |
Symmetry codes: (i) x, y−1, z; (ii) −x, −y+2, −z+1; (iii) −x, −y+1, −z+1; (iv) x+1, y, z+1; (v) −x+1, −y+2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C10H7N2+·HSO4− |
Mr | 252.24 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 7.2154 (3), 8.2334 (4), 9.9985 (4) |
α, β, γ (°) | 110.622 (2), 90.982 (3), 110.791 (2) |
V (Å3) | 512.82 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.32 |
Crystal size (mm) | 0.34 × 0.19 × 0.12 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.900, 0.963 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5740, 1979, 1721 |
Rint | 0.032 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.051, 0.154, 1.11 |
No. of reflections | 1979 |
No. of parameters | 186 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.82, −0.56 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N1···O1i | 0.98 (5) | 1.71 (5) | 2.669 (3) | 169 (4) |
O4—H1O4···O2ii | 0.67 (5) | 1.97 (5) | 2.641 (3) | 176 (7) |
C2—H2A···O2iii | 0.91 (4) | 2.53 (4) | 3.320 (4) | 145 (3) |
C5—H5A···O4iv | 0.98 (3) | 2.52 (3) | 3.475 (4) | 166 (3) |
C7—H7A···O3iv | 0.94 (4) | 2.41 (4) | 3.338 (4) | 167 (3) |
C8—H8A···O2v | 0.99 (4) | 2.59 (4) | 3.309 (4) | 130 (3) |
Symmetry codes: (i) x, y−1, z; (ii) −x, −y+2, −z+1; (iii) −x, −y+1, −z+1; (iv) x+1, y, z+1; (v) −x+1, −y+2, −z+1. |
Acknowledgements
The authors thank Universiti Sains Malaysia (USM) for the Research University Grant (1001/PFIZIK/811160). WSL thanks USM for the award of a USM fellowship and HM thanks USM for the award of a post doctoral fellowship.
References
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Recently, hydrogen-bonding patterns involving quinoline and its derivatives with organic acid have been investigated (Loh at al., 2010a,b). Syntheses of the quinoline derivatives were discussed earlier (Sasaki et al., 1998; Reux et al., 2009). Quinolines and their derivatives are very important compounds because of their wide occurrence in natural products (Morimoto et al., 1991; Michael, 1997) and biologically active compounds (Markees et al., 1970; Campbell et al., 1988). Heterocyclic molecules containing cyano group are useful as drug intermediates. Herein we report the synthesis of 2-cyanoquinolin-1-ium hydrogen sulfate.
The asymmetric unit of the title compound (Fig. 1) consists of one 2-cyanoquinolin-1-ium cation (C1–C10/N1/N2) and one hydrogen sulfate anion (O1–O4/S1). One proton is transferred from the hydroxyl group of hydrogen sulfate to the atom N1 of 2-cyanoquinoline during the crystallization, resulting in the formation of salt. The quinoline ring system (C1–C9/N1) is approximately planar with a maximum deviation of 0.013 (3) Å at atom C6. Bond lengths (Allen et al., 1987) and angles are within the normal ranges and are comparable to the related structures (Loh et al., 2010a,b).
In the crystal (Fig. 2), the cations are linked by the anions via intermolecular N1—H1N1···O1, O4—H1O4···O2, C2—H2A···O2, C5—H5A···O4, C7—H7A···O3 and C8—H8A···O2 hydrogen bonds (Table 1) into a two-dimensional networks.