organic compounds
Methyl 3-[(E,E)-3-phenylprop-2-enylidene]dithiocarbazate
aDepartment of Chemistry, Rajshahi University, Rajshahi 6205, Bangladesh, bDepartment of Chemistry, Rajshahi University of Engineering & Technology, Rajshahi 6204, Bangladesh, and cDipartimento di Scienze Chimiche, Via Licio Giorgieri 1, 34127 Trieste, Italy
*Correspondence e-mail: ttofazzal@yahoo.com
In the title compound, C11H12N2S2, the dithiocarbazate group adopts an EE configuration with respect to the C=C and C=N bonds of the propenylidene group. The atoms of the propenylidene and dithiocarbazate unit are essentially co-planar, with a maximum deviation of 0.058 (1) Å; the phenyl ring forms a dihedral angle of 18.3 (1)° with this fragment. In the crystal, molecules form inversion dimers via pairs of N—H⋯S hydrogen bonds involving the terminal S atom.
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: XPRESS (MacScience, 2002); cell DENZO (Otwinowski & Minor, 1997); data reduction: DENZO and SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
https://doi.org/10.1107/S1600536810041115/pv2336sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810041115/pv2336Isup2.hkl
The S-methyldithiocarbazate (2.44 g, 0.2 mol), prepared as previously described (Tarafder et al., 2008), was dissolved in hot absolute ethanol (30–40 ml). To this solution an equimolar amount of cinnamaldehyde in hot absolute ethanol (20 ml) was added and the mixture was heated for 20 min and then cooled. The orange precipitate thus formed was separated and dried in vacuo over anhydrous CaCl2. Orange needle shaped single crystals of the Schiff base were obtained after recrysallization from acetone over 15 days; M. p. 443 K (very sharp and abrupt).
All H atoms were located geometrically and treated as riding atoms, with N—H = 0.86 and C—H = 0.93 and 0.96 Å for aryl and methyl H-atoms with Uĩso~(H) = 1.2U~eq~(N or aryl-C) or 1.5U~eq~(methyl-C).
The molecule of the title compound is shown in Fig. 1. The atoms of propenylidene and dithiocarbazate moiety lie essentially in the same plane, with a maximum deviation from the mean plane of 0.058 (1) Å exhibited by S2, while the phenyl ring forms a dihedral angle of 18.3 (1)° with the cited fragment. The crystal packing evidences molecules connected in pairs about inversion centers and connected by N1—H1···S1 hydrogen bonds involving the terminal sulfur atom (Table 1). The structural features of the title compound are smilar to those observed in a benzyl derivative (Tarafder et al., 2008)). The Schiff base is potentially bidentate and coordinates via the β-nitrogen and the thiolate anion generated during complexation.
For the synthesis and a related structure, see: Tarafder et al. (2008).
Data collection: XPRESS (MacScience, 2002); cell
DENZO (Otwinowski & Minor, 1997); data reduction: DENZO and SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. ORTEP drawing of the title molecule; thermal ellipsoids are drawn at the 40% probability level. |
C11H12N2S2 | F(000) = 496 |
Mr = 236.35 | Dx = 1.331 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 275 reflections |
a = 10.408 (2) Å | θ = 3.6–20.7° |
b = 5.4950 (9) Å | µ = 0.42 mm−1 |
c = 20.988 (2) Å | T = 293 K |
β = 100.697 (10)° | Needle, orange |
V = 1179.5 (3) Å3 | 0.40 × 0.15 × 0.12 mm |
Z = 4 |
Enraf–Nonius DIP1030 image-plate diffractometer | 1569 reflections with I > 2.0σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.037 |
Graphite monochromator | θmax = 25.3°, θmin = 3.1° |
φ–scans with narrow frames | h = −12→12 |
6316 measured reflections | k = −6→6 |
2048 independent reflections | l = −25→25 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.038 | H-atom parameters constrained |
wR(F2) = 0.116 | w = 1/[σ2(Fo2) + (0.0721P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max = 0.001 |
2048 reflections | Δρmax = 0.14 e Å−3 |
138 parameters | Δρmin = −0.21 e Å−3 |
0 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.023 (4) |
C11H12N2S2 | V = 1179.5 (3) Å3 |
Mr = 236.35 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.408 (2) Å | µ = 0.42 mm−1 |
b = 5.4950 (9) Å | T = 293 K |
c = 20.988 (2) Å | 0.40 × 0.15 × 0.12 mm |
β = 100.697 (10)° |
Enraf–Nonius DIP1030 image-plate diffractometer | 1569 reflections with I > 2.0σ(I) |
6316 measured reflections | Rint = 0.037 |
2048 independent reflections |
R[F2 > 2σ(F2)] = 0.038 | 0 restraints |
wR(F2) = 0.116 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.14 e Å−3 |
2048 reflections | Δρmin = −0.21 e Å−3 |
138 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 1.15322 (6) | 0.68232 (10) | 0.57196 (3) | 0.0759 (2) | |
S2 | 1.08034 (6) | 0.51686 (10) | 0.69852 (3) | 0.0734 (2) | |
N1 | 0.99960 (18) | 0.3187 (3) | 0.58644 (8) | 0.0682 (5) | |
H1 | 0.9962 | 0.2915 | 0.5458 | 0.082* | |
N2 | 0.92717 (19) | 0.1751 (3) | 0.62061 (9) | 0.0680 (5) | |
C1 | 1.1813 (3) | 0.7789 (4) | 0.72034 (11) | 0.0791 (6) | |
H1A | 1.2653 | 0.7525 | 0.7089 | 0.119* | |
H1B | 1.1918 | 0.8059 | 0.7662 | 0.119* | |
H1C | 1.1407 | 0.9187 | 0.6976 | 0.119* | |
C2 | 1.0751 (2) | 0.4996 (3) | 0.61523 (10) | 0.0625 (5) | |
C3 | 0.8633 (2) | 0.0018 (3) | 0.58766 (11) | 0.0656 (5) | |
H3 | 0.8723 | −0.0225 | 0.5449 | 0.079* | |
C4 | 0.7788 (2) | −0.1538 (3) | 0.61562 (10) | 0.0670 (5) | |
H4 | 0.7718 | −0.1294 | 0.6587 | 0.080* | |
C5 | 0.7095 (2) | −0.3328 (3) | 0.58259 (10) | 0.0653 (5) | |
H5 | 0.7240 | −0.3613 | 0.5408 | 0.078* | |
C6 | 0.6139 (2) | −0.4880 (3) | 0.60503 (10) | 0.0634 (5) | |
C7 | 0.5705 (3) | −0.4487 (4) | 0.66304 (12) | 0.0750 (6) | |
H7 | 0.6053 | −0.3208 | 0.6898 | 0.090* | |
C8 | 0.4770 (3) | −0.5962 (5) | 0.68147 (14) | 0.0898 (7) | |
H8 | 0.4487 | −0.5659 | 0.7202 | 0.108* | |
C9 | 0.4250 (3) | −0.7874 (5) | 0.64316 (17) | 0.0963 (9) | |
H9 | 0.3623 | −0.8870 | 0.6560 | 0.116* | |
C10 | 0.4657 (3) | −0.8309 (4) | 0.58615 (16) | 0.0944 (8) | |
H10 | 0.4305 | −0.9603 | 0.5601 | 0.113* | |
C11 | 0.5596 (3) | −0.6831 (4) | 0.56675 (13) | 0.0799 (7) | |
H11 | 0.5866 | −0.7146 | 0.5277 | 0.096* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0761 (5) | 0.0872 (4) | 0.0662 (4) | −0.0152 (3) | 0.0178 (3) | 0.0061 (2) |
S2 | 0.0809 (5) | 0.0799 (4) | 0.0592 (4) | −0.0143 (3) | 0.0122 (3) | 0.0035 (2) |
N1 | 0.0743 (13) | 0.0726 (10) | 0.0600 (10) | −0.0089 (9) | 0.0181 (9) | −0.0002 (7) |
N2 | 0.0681 (12) | 0.0698 (10) | 0.0670 (10) | −0.0066 (8) | 0.0150 (9) | 0.0030 (8) |
C1 | 0.0811 (17) | 0.0813 (13) | 0.0730 (14) | −0.0110 (12) | 0.0092 (12) | −0.0046 (10) |
C2 | 0.0574 (13) | 0.0664 (12) | 0.0636 (12) | 0.0012 (9) | 0.0112 (9) | 0.0024 (8) |
C3 | 0.0686 (15) | 0.0647 (12) | 0.0631 (12) | 0.0011 (10) | 0.0111 (10) | 0.0014 (8) |
C4 | 0.0698 (15) | 0.0673 (11) | 0.0631 (12) | −0.0028 (10) | 0.0104 (10) | 0.0010 (9) |
C5 | 0.0682 (14) | 0.0658 (12) | 0.0611 (11) | 0.0013 (10) | 0.0099 (10) | −0.0002 (8) |
C6 | 0.0633 (14) | 0.0560 (10) | 0.0683 (13) | 0.0023 (8) | 0.0057 (10) | 0.0036 (8) |
C7 | 0.0799 (17) | 0.0700 (12) | 0.0756 (14) | −0.0059 (11) | 0.0160 (12) | 0.0006 (10) |
C8 | 0.090 (2) | 0.0870 (15) | 0.0964 (18) | −0.0020 (14) | 0.0276 (15) | 0.0160 (13) |
C9 | 0.0772 (18) | 0.0813 (16) | 0.129 (3) | −0.0085 (13) | 0.0151 (17) | 0.0274 (16) |
C10 | 0.091 (2) | 0.0722 (15) | 0.114 (2) | −0.0154 (13) | 0.0022 (17) | −0.0017 (13) |
C11 | 0.0866 (18) | 0.0680 (13) | 0.0813 (15) | −0.0038 (12) | 0.0061 (13) | −0.0054 (10) |
S1—C2 | 1.664 (2) | C5—C6 | 1.454 (3) |
S2—C2 | 1.741 (2) | C5—H5 | 0.9300 |
S2—C1 | 1.791 (2) | C6—C7 | 1.392 (3) |
N1—C2 | 1.339 (3) | C6—C11 | 1.395 (3) |
N1—N2 | 1.381 (2) | C7—C8 | 1.376 (3) |
N1—H1 | 0.8600 | C7—H7 | 0.9300 |
N2—C3 | 1.287 (3) | C8—C9 | 1.372 (4) |
C1—H1A | 0.9600 | C8—H8 | 0.9300 |
C1—H1B | 0.9600 | C9—C10 | 1.363 (4) |
C1—H1C | 0.9600 | C9—H9 | 0.9300 |
C3—C4 | 1.428 (3) | C10—C11 | 1.388 (4) |
C3—H3 | 0.9300 | C10—H10 | 0.9300 |
C4—C5 | 1.335 (3) | C11—H11 | 0.9300 |
C4—H4 | 0.9300 | ||
C2—S2—C1 | 102.02 (11) | C4—C5—H5 | 116.6 |
C2—N1—N2 | 121.39 (18) | C6—C5—H5 | 116.6 |
C2—N1—H1 | 119.3 | C7—C6—C11 | 117.4 (2) |
N2—N1—H1 | 119.3 | C7—C6—C5 | 123.05 (18) |
C3—N2—N1 | 114.92 (18) | C11—C6—C5 | 119.5 (2) |
S2—C1—H1A | 109.5 | C8—C7—C6 | 121.1 (2) |
S2—C1—H1B | 109.5 | C8—C7—H7 | 119.5 |
H1A—C1—H1B | 109.5 | C6—C7—H7 | 119.5 |
S2—C1—H1C | 109.5 | C9—C8—C7 | 120.6 (3) |
H1A—C1—H1C | 109.5 | C9—C8—H8 | 119.7 |
H1B—C1—H1C | 109.5 | C7—C8—H8 | 119.7 |
N1—C2—S1 | 120.44 (16) | C10—C9—C8 | 119.7 (3) |
N1—C2—S2 | 113.58 (15) | C10—C9—H9 | 120.1 |
S1—C2—S2 | 125.98 (12) | C8—C9—H9 | 120.1 |
N2—C3—C4 | 121.2 (2) | C9—C10—C11 | 120.4 (2) |
N2—C3—H3 | 119.4 | C9—C10—H10 | 119.8 |
C4—C3—H3 | 119.4 | C11—C10—H10 | 119.8 |
C5—C4—C3 | 122.8 (2) | C10—C11—C6 | 120.8 (3) |
C5—C4—H4 | 118.6 | C10—C11—H11 | 119.6 |
C3—C4—H4 | 118.6 | C6—C11—H11 | 119.6 |
C4—C5—C6 | 126.9 (2) | ||
C2—N1—N2—C3 | −177.27 (18) | C4—C5—C6—C11 | −173.6 (2) |
N2—N1—C2—S1 | −175.70 (15) | C11—C6—C7—C8 | −0.5 (3) |
N2—N1—C2—S2 | 4.4 (2) | C5—C6—C7—C8 | 178.1 (2) |
C1—S2—C2—N1 | −177.67 (16) | C6—C7—C8—C9 | 0.6 (4) |
C1—S2—C2—S1 | 2.41 (18) | C7—C8—C9—C10 | −0.4 (4) |
N1—N2—C3—C4 | −176.76 (18) | C8—C9—C10—C11 | 0.1 (4) |
N2—C3—C4—C5 | 178.9 (2) | C9—C10—C11—C6 | 0.0 (4) |
C3—C4—C5—C6 | −174.93 (19) | C7—C6—C11—C10 | 0.2 (3) |
C4—C5—C6—C7 | 7.9 (3) | C5—C6—C11—C10 | −178.4 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···S1i | 0.86 | 2.67 | 3.4086 (19) | 145 |
Symmetry code: (i) −x+2, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C11H12N2S2 |
Mr | 236.35 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 10.408 (2), 5.4950 (9), 20.988 (2) |
β (°) | 100.697 (10) |
V (Å3) | 1179.5 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.42 |
Crystal size (mm) | 0.40 × 0.15 × 0.12 |
Data collection | |
Diffractometer | Enraf–Nonius DIP1030 image-plate diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2.0σ(I)] reflections | 6316, 2048, 1569 |
Rint | 0.037 |
(sin θ/λ)max (Å−1) | 0.601 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.116, 1.04 |
No. of reflections | 2048 |
No. of parameters | 138 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.14, −0.21 |
Computer programs: XPRESS (MacScience, 2002), DENZO (Otwinowski & Minor, 1997), DENZO and SCALEPACK (Otwinowski & Minor, 1997), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···S1i | 0.86 | 2.67 | 3.4086 (19) | 145 |
Symmetry code: (i) −x+2, −y+1, −z+1. |
Acknowledgements
MTHT, SSK and MAAAAI are grateful to the Department of Chemistry, Rajshahi University, for the provision of laboratory facilities. EZ thanks MIUR, Rome (PRIN No. 2007HMTJWP_002) for financial support.
References
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
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MacScience (2002). XPRESS. MacScience Co. Ltd, Yokohama, Japan. Google Scholar
Otwinowski, Z. & Minor, W. (1997). Methods in Enzymology, Vol. 276, Macromolecular Crystallography, Part A, edited by C. W. Carter Jr & R. M. Sweet, pp. 307–326. New York: Academic Press. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Tarafder, M. T. H., Crouse, K. A., Islam, M. T., Chantrapromma, S. & Fun, H.-K. (2008). Acta Cryst. E64, o1042–o1043. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
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The molecule of the title compound is shown in Fig. 1. The atoms of propenylidene and dithiocarbazate moiety lie essentially in the same plane, with a maximum deviation from the mean plane of 0.058 (1) Å exhibited by S2, while the phenyl ring forms a dihedral angle of 18.3 (1)° with the cited fragment. The crystal packing evidences molecules connected in pairs about inversion centers and connected by N1—H1···S1 hydrogen bonds involving the terminal sulfur atom (Table 1). The structural features of the title compound are smilar to those observed in a benzyl derivative (Tarafder et al., 2008)). The Schiff base is potentially bidentate and coordinates via the β-nitrogen and the thiolate anion generated during complexation.