organic compounds
2,4-Bis(2-methylphenyl)-3-azabicyclo[3.3.1]nonan-9-one O-methyloxime
aDepartment of Image Science and Engineering, Pukyong National University, Busan 608 739, Republic of Korea, and bDepartment of Chemistry, IIT Madras, Chennai, TamilNadu, India
*Correspondence e-mail: ytjeong@pknu.ac.kr
The molecule of the title compound, C23H28N2O, exists in a twin-chair conformation, with equatorial orientation of the ortho-tolyl groups on both sides of the secondary amino group. The title oxime compound and its ketone precursor 2,4-bis(2-methylphenyl)-3-azabicyclo[3.3.1]nonan-9-one exhibit similar stereochemistries, with the orientation of the o-tolyl rings almost identical in both compounds. In the title compound, the tolyl rings are at an angle of 23.77 (3)° with respect to one another; the angle in the precursor is 29.4 (1)° [Vijayalakshmi, Parthasarathi, Venkatraj & Jeyaraman (2000), Acta Cryst. C56, 1240–1241]. The cyclohexane ring and the oxime ether are disordered over two alternative orientations, with a refined site-occupancy ratio of 0.813 (2):0.186 (4). The of the title compound is stabilized by intermolecular N—H⋯π interactions.
Related literature
For the synthesis and biological activities of oxime derivatives of 3-azabicyclo[3.3.1]nonan-9-ones, see: Parthiban et al. (2009a,b, 2010a,b); Jeyaraman & Avila (1981). For related structures with similar conformations, see: Vijayalakshmi et al. (2000); Parthiban et al. (2009c,d). For ring-puckering parameters, see: Cremer & Pople (1975); Nardelli (1983).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2004); cell APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97.
Supporting information
https://doi.org/10.1107/S1600536810043436/zl2305sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810043436/zl2305Isup2.hkl
The title compound was synthesized by adding 0.501 g O-methylhydroxylamine hydrochloride (0.006 mol) and 2.04 g sodium acetate trihydrate (0.015 mol) in a hot ethanolic solution of 1.597 g 2,4-bis(2-methylphenyl)-3-azabicyclo[3.3.1]nonan-9-one (0.005 mol) (Parthiban et al., 2010b). The content was refluxed at 345–350 K till completion of the reaction; the progress and completion of the reaction was monitored by TLC. After the consumption of starting material, the content of the flask was concentrated and water was added. Then, the precipitated oxime ether was separated by filtration, washed with an excess of water, and dried in vacuum. X-ray diffraction quality crystals of 2,4-bis(2-methylphenyl)-3-azabicyclo[3.3.1]nonan-9-one O-methyloxime were obtained by slow evaporation from ethanol.
The cyclohexane ring C2–C6/C8 and the oxime ether N2/O1/C22 are disordered over two orientations with a refined site occupancy ratio of 0.813 (2) to 0.186 (4). The two moieties were restrained to have similar geometries. The atoms N2b, O1b and C22b of the minor moiety were restrained to have similar anisotropic displacement parameters. The ADPs of all other disordered atoms in the minor moiety were constrained to be identical to those of their counterparts in the major moiety.
The nitrogen H atom was located in a difference Fourier map and refined isotropically. Other H atoms were fixed geometrically and allowed to ride on the parent C atoms with aromatic C—H = 0.93 Å, methylene C—H = 0.97 Å, methine C—H = 0.98 Å and methyl C—H = 0.96 Å. The displacement parameters were set for phenyl, methylene and aliphatic H atoms at Uiso(H) = 1.2Ueq(C) and for methyl H atoms at Uiso(H) = 1.5Ueq(C).
Nitrogen containing heterocyclic
and oxime are very important molecules in the field of medicinal chemistry due to their broad spectrum of biological activities viz. antifungal, antibacterial, antimycobacterial, analgesic, antagonistic, anticancer, antiinflammatory, local anesthetic and hypotensive activity (Parthiban et al., 2009a,b, 2010a,b; Jeyaraman & Avila, 1981). Since the stereochemistry of bio-active molecules is a major criterion for their biological response, it is of immense help to establish the stereochemistry of the newly synthesized molecules. Accordingly, we have synthesized the title oxime ether to examine its conformation and orientation of the substituents.In the
the oxime unit is partially flipped thus inducing disorder for the oxime (N2/O1/C22) and also for the piperidine ring N1/C1/C2/C8/C6/C7 and the cylcohexane ring C2–C6/C8 over two orientations. The site occupancy ratio refined to 0.813 (2) to 0.186 (4). The tolyl rings do not participate in the disorder (Fig. 3).An analysis of the six-membered piperidine ring gave the following: According to Nardelli (Nardelli, 1983), the smallest displacement asymmetry parameters q2 and q3 are 0.052 (4) and -0.614 (4) Å, respectively. According to Cremer and Pople (Cremer & Pople, 1975), the ring puckering parameters such as total puckering amplitude QT and phase angle θ are 0.616 (4) Å and 175.5 (4)°. Thus, all parameters strongly support a near ideal chair conformation for the piperidine ring N1/C1/C2/C8/C6/C7. Similarly, the analysis of cyclohexane ring C2–C6/C8 indicates that it also adopts a chair conformation. It is, however, deviating more from the ideal chair with puckering parameters QT and θ of 0.553 (7) Å and 169.2 (9)°, and q2 and q3 of 0.108 (9) and -0.543 (8) Å, respectively.
The torsion angles C8—C6—C7—C15 and C8—C2—C1—C9 of the ortho-tolyl rings are -177.2 (3) and 179.2 (3)° and they are orientated at an angle of 23.77 (3)° with respect to one another, whereas in its ketone precursor, 2,4-bis(2-methylphenyl)-3-azabicyclo[3.3.1]nonan-9-one, they are oriented at an angle of 29.4 (1)° (Vijayalakshmi et al., 2000). The π interactions with N1—H1···Cg1 = 2.633 Å, (Cg: C15–C20; symmetry operator = 1 - x, 2 - y, -z.)
of the title compound is stabilized by intermolecular N—H···Thus, the detailed crystallographic study of asymmetry parameters, ring puckering parameters and torsion angles calculated for the title compound proves that the bicyclic moiety exists in a twin-chair conformation with equatorial orientation of the ortho-tolyl rings on both sides of the secondary amino group.
For the synthesis and biological activities of oxime derivatives of 3-azabicyclo[3.3.1]nonan-9-ones, see: Parthiban et al. (2009a,b, 2010a,b); Jeyaraman & Avila (1981). For related structures with similar conformations, see: Vijayalakshmi et al. (2000); Parthiban et al. (2009c,d). For ring-puckering parameters, see: Cremer & Pople (1975); Nardelli (1983).
Data collection: APEX2 (Bruker, 2004); cell
APEX2 (Bruker, 2004) and SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004) and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C23H28N2O | F(000) = 752 |
Mr = 348.47 | Dx = 1.183 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 2129 reflections |
a = 6.9700 (9) Å | θ = 2.2–20.4° |
b = 15.3476 (16) Å | µ = 0.07 mm−1 |
c = 18.354 (2) Å | T = 298 K |
β = 94.622 (4)° | Block, colourless |
V = 1957.0 (4) Å3 | 0.32 × 0.27 × 0.15 mm |
Z = 4 |
Bruker APEXII CCD area-detector diffractometer | 4416 independent reflections |
Radiation source: fine-focus sealed tube | 2070 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.043 |
φ and ω scans | θmax = 28.3°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | h = −9→9 |
Tmin = 0.977, Tmax = 0.989 | k = −20→13 |
12742 measured reflections | l = −24→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.060 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.169 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0708P)2 + 0.1996P] where P = (Fo2 + 2Fc2)/3 |
4416 reflections | (Δ/σ)max < 0.001 |
288 parameters | Δρmax = 0.14 e Å−3 |
38 restraints | Δρmin = −0.19 e Å−3 |
C23H28N2O | V = 1957.0 (4) Å3 |
Mr = 348.47 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 6.9700 (9) Å | µ = 0.07 mm−1 |
b = 15.3476 (16) Å | T = 298 K |
c = 18.354 (2) Å | 0.32 × 0.27 × 0.15 mm |
β = 94.622 (4)° |
Bruker APEXII CCD area-detector diffractometer | 4416 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | 2070 reflections with I > 2σ(I) |
Tmin = 0.977, Tmax = 0.989 | Rint = 0.043 |
12742 measured reflections |
R[F2 > 2σ(F2)] = 0.060 | 38 restraints |
wR(F2) = 0.169 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | Δρmax = 0.14 e Å−3 |
4416 reflections | Δρmin = −0.19 e Å−3 |
288 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
N1 | 0.6085 (3) | 0.86925 (11) | 0.08349 (9) | 0.0470 (5) | |
C1 | 0.5497 (3) | 0.81766 (13) | 0.14551 (11) | 0.0461 (6) | |
H1 | 0.4087 | 0.8169 | 0.1428 | 0.055* | |
C7 | 0.5361 (3) | 0.83350 (13) | 0.01217 (12) | 0.0497 (6) | |
H7 | 0.3953 | 0.8317 | 0.0100 | 0.060* | |
C9 | 0.6212 (3) | 0.85822 (13) | 0.21810 (12) | 0.0462 (6) | |
C10 | 0.7833 (3) | 0.91132 (15) | 0.22295 (13) | 0.0563 (6) | |
H10 | 0.8457 | 0.9223 | 0.1810 | 0.068* | |
C11 | 0.8540 (4) | 0.94796 (17) | 0.28793 (14) | 0.0663 (7) | |
H11 | 0.9614 | 0.9840 | 0.2895 | 0.080* | |
C12 | 0.7663 (4) | 0.93131 (18) | 0.34982 (15) | 0.0704 (8) | |
H12 | 0.8140 | 0.9552 | 0.3942 | 0.084* | |
C13 | 0.6056 (4) | 0.87857 (17) | 0.34608 (14) | 0.0670 (8) | |
H13 | 0.5467 | 0.8670 | 0.3887 | 0.080* | |
C14 | 0.5287 (3) | 0.84220 (15) | 0.28101 (13) | 0.0533 (6) | |
C15 | 0.5949 (3) | 0.88982 (14) | −0.05005 (12) | 0.0485 (6) | |
C16 | 0.4936 (3) | 0.88717 (14) | −0.11942 (13) | 0.0554 (6) | |
C17 | 0.5643 (4) | 0.93407 (17) | −0.17588 (13) | 0.0654 (7) | |
H17 | 0.4987 | 0.9317 | −0.2220 | 0.078* | |
C18 | 0.7258 (4) | 0.98333 (18) | −0.16638 (15) | 0.0737 (8) | |
H18 | 0.7717 | 1.0131 | −0.2056 | 0.088* | |
C19 | 0.8199 (4) | 0.9886 (2) | −0.09852 (15) | 0.0850 (9) | |
H19 | 0.9277 | 1.0241 | −0.0907 | 0.102* | |
C20 | 0.7563 (4) | 0.94157 (17) | −0.04161 (14) | 0.0716 (8) | |
H20 | 0.8242 | 0.9448 | 0.0040 | 0.086* | |
C21 | 0.3492 (4) | 0.78778 (18) | 0.28148 (15) | 0.0799 (9) | |
H21A | 0.2570 | 0.8069 | 0.2431 | 0.120* | |
H21B | 0.2956 | 0.7940 | 0.3278 | 0.120* | |
H21C | 0.3804 | 0.7277 | 0.2738 | 0.120* | |
C23 | 0.3094 (4) | 0.8366 (2) | −0.13412 (16) | 0.0958 (11) | |
H23A | 0.3383 | 0.7757 | −0.1376 | 0.144* | |
H23B | 0.2439 | 0.8561 | −0.1792 | 0.144* | |
H23C | 0.2285 | 0.8459 | −0.0949 | 0.144* | |
C2 | 0.6198 (9) | 0.7228 (3) | 0.1364 (2) | 0.0452 (10) | 0.814 (5) |
H2 | 0.5669 | 0.6871 | 0.1743 | 0.054* | 0.814 (5) |
C3 | 0.8388 (9) | 0.7096 (8) | 0.1418 (3) | 0.0547 (14) | 0.814 (5) |
H3A | 0.8937 | 0.7353 | 0.1871 | 0.066* | 0.814 (5) |
H3B | 0.8661 | 0.6476 | 0.1439 | 0.066* | 0.814 (5) |
C4 | 0.9363 (12) | 0.7491 (12) | 0.0785 (4) | 0.0608 (14) | 0.814 (5) |
H4A | 1.0673 | 0.7275 | 0.0795 | 0.073* | 0.814 (5) |
H4B | 0.9421 | 0.8119 | 0.0844 | 0.073* | 0.814 (5) |
C5 | 0.8307 (10) | 0.7274 (7) | 0.0047 (3) | 0.0628 (12) | 0.814 (5) |
H5A | 0.8582 | 0.6675 | −0.0075 | 0.075* | 0.814 (5) |
H5B | 0.8804 | 0.7643 | −0.0323 | 0.075* | 0.814 (5) |
C6 | 0.6115 (9) | 0.7394 (2) | 0.0025 (2) | 0.0491 (10) | 0.814 (5) |
H6 | 0.5532 | 0.7158 | −0.0438 | 0.059* | 0.814 (5) |
C8 | 0.5378 (8) | 0.6901 (3) | 0.0635 (2) | 0.0475 (11) | 0.814 (5) |
C2B | 0.621 (4) | 0.7216 (11) | 0.1560 (11) | 0.0452 (10) | 0.186 (5) |
H2B | 0.5691 | 0.6932 | 0.1980 | 0.054* | 0.186 (5) |
C3B | 0.843 (4) | 0.715 (4) | 0.1583 (18) | 0.0547 (14) | 0.186 (5) |
H3C | 0.8985 | 0.7459 | 0.2011 | 0.066* | 0.186 (5) |
H3D | 0.8799 | 0.6543 | 0.1636 | 0.066* | 0.186 (5) |
C4B | 0.928 (6) | 0.751 (6) | 0.091 (2) | 0.0608 (14) | 0.186 (5) |
H4C | 1.0571 | 0.7279 | 0.0894 | 0.073* | 0.186 (5) |
H4D | 0.9406 | 0.8141 | 0.0970 | 0.073* | 0.186 (5) |
C5B | 0.814 (5) | 0.733 (4) | 0.0191 (17) | 0.0628 (12) | 0.186 (5) |
H5C | 0.8508 | 0.6755 | 0.0023 | 0.075* | 0.186 (5) |
H5D | 0.8504 | 0.7749 | −0.0167 | 0.075* | 0.186 (5) |
C6B | 0.594 (5) | 0.7349 (11) | 0.0214 (12) | 0.0491 (10) | 0.186 (5) |
H6B | 0.5385 | 0.7044 | −0.0223 | 0.059* | 0.186 (5) |
C8B | 0.546 (4) | 0.6829 (17) | 0.0853 (12) | 0.0475 (11) | 0.186 (5) |
N2 | 0.4164 (5) | 0.6292 (2) | 0.0473 (2) | 0.0555 (9) | 0.814 (5) |
O1 | 0.3550 (4) | 0.59007 (17) | 0.11187 (14) | 0.0658 (9) | 0.814 (5) |
C22 | 0.2246 (7) | 0.5220 (3) | 0.0898 (3) | 0.0928 (17) | 0.814 (5) |
H22A | 0.1227 | 0.5449 | 0.0570 | 0.139* | 0.814 (5) |
H22B | 0.1715 | 0.4978 | 0.1320 | 0.139* | 0.814 (5) |
H22C | 0.2916 | 0.4773 | 0.0654 | 0.139* | 0.814 (5) |
N2B | 0.427 (2) | 0.6218 (8) | 0.0948 (8) | 0.048 (4) | 0.186 (5) |
O1B | 0.3413 (16) | 0.5918 (7) | 0.0264 (5) | 0.060 (3) | 0.186 (5) |
C22B | 0.220 (3) | 0.5208 (13) | 0.0398 (10) | 0.087 (7) | 0.186 (5) |
H22D | 0.2958 | 0.4735 | 0.0608 | 0.130* | 0.186 (5) |
H22E | 0.1535 | 0.5021 | −0.0054 | 0.130* | 0.186 (5) |
H22F | 0.1277 | 0.5384 | 0.0731 | 0.130* | 0.186 (5) |
H1N | 0.563 (4) | 0.927 (2) | 0.0881 (15) | 0.104* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0589 (12) | 0.0416 (10) | 0.0405 (11) | −0.0091 (9) | 0.0041 (9) | −0.0006 (9) |
C1 | 0.0432 (13) | 0.0455 (12) | 0.0500 (14) | −0.0055 (10) | 0.0066 (10) | 0.0049 (11) |
C7 | 0.0505 (14) | 0.0450 (13) | 0.0526 (15) | −0.0115 (10) | −0.0024 (11) | −0.0044 (11) |
C9 | 0.0466 (14) | 0.0456 (13) | 0.0471 (14) | 0.0057 (10) | 0.0077 (11) | 0.0050 (10) |
C10 | 0.0569 (15) | 0.0651 (15) | 0.0479 (15) | −0.0076 (12) | 0.0104 (12) | −0.0052 (12) |
C11 | 0.0605 (17) | 0.0771 (18) | 0.0612 (18) | −0.0052 (14) | 0.0041 (14) | −0.0142 (14) |
C12 | 0.082 (2) | 0.0784 (19) | 0.0500 (17) | 0.0130 (16) | 0.0007 (15) | −0.0095 (14) |
C13 | 0.080 (2) | 0.0710 (17) | 0.0530 (17) | 0.0211 (15) | 0.0244 (14) | 0.0091 (14) |
C14 | 0.0569 (15) | 0.0541 (14) | 0.0503 (15) | 0.0102 (12) | 0.0142 (12) | 0.0102 (12) |
C15 | 0.0528 (14) | 0.0475 (13) | 0.0445 (14) | −0.0041 (11) | 0.0006 (11) | −0.0035 (11) |
C16 | 0.0612 (16) | 0.0500 (14) | 0.0529 (15) | 0.0001 (12) | −0.0074 (12) | −0.0072 (12) |
C17 | 0.083 (2) | 0.0656 (17) | 0.0454 (15) | 0.0104 (15) | −0.0069 (14) | −0.0010 (13) |
C18 | 0.077 (2) | 0.0842 (19) | 0.0602 (18) | −0.0015 (16) | 0.0084 (16) | 0.0196 (15) |
C19 | 0.071 (2) | 0.105 (2) | 0.077 (2) | −0.0352 (17) | −0.0080 (16) | 0.0304 (18) |
C20 | 0.0695 (19) | 0.0869 (19) | 0.0552 (16) | −0.0322 (15) | −0.0137 (14) | 0.0161 (14) |
C21 | 0.074 (2) | 0.086 (2) | 0.084 (2) | −0.0038 (16) | 0.0332 (16) | 0.0165 (16) |
C23 | 0.095 (2) | 0.102 (2) | 0.083 (2) | −0.0286 (19) | −0.0386 (18) | 0.0025 (17) |
C2 | 0.0569 (16) | 0.0393 (12) | 0.040 (3) | −0.0069 (11) | 0.011 (2) | 0.0081 (16) |
C3 | 0.0604 (17) | 0.051 (2) | 0.052 (4) | 0.0061 (13) | 0.002 (2) | −0.005 (3) |
C4 | 0.0500 (17) | 0.0626 (19) | 0.071 (4) | 0.0018 (15) | 0.012 (2) | −0.005 (4) |
C5 | 0.075 (2) | 0.057 (2) | 0.060 (3) | 0.0040 (18) | 0.025 (2) | −0.008 (3) |
C6 | 0.067 (2) | 0.0449 (14) | 0.035 (3) | −0.0150 (13) | 0.007 (2) | −0.0068 (14) |
C8 | 0.0547 (16) | 0.0316 (15) | 0.055 (3) | −0.0055 (13) | 0.001 (2) | 0.004 (2) |
C2B | 0.0569 (16) | 0.0393 (12) | 0.040 (3) | −0.0069 (11) | 0.011 (2) | 0.0081 (16) |
C3B | 0.0604 (17) | 0.051 (2) | 0.052 (4) | 0.0061 (13) | 0.002 (2) | −0.005 (3) |
C4B | 0.0500 (17) | 0.0626 (19) | 0.071 (4) | 0.0018 (15) | 0.012 (2) | −0.005 (4) |
C5B | 0.075 (2) | 0.057 (2) | 0.060 (3) | 0.0040 (18) | 0.025 (2) | −0.008 (3) |
C6B | 0.067 (2) | 0.0449 (14) | 0.035 (3) | −0.0150 (13) | 0.007 (2) | −0.0068 (14) |
C8B | 0.0547 (16) | 0.0316 (15) | 0.055 (3) | −0.0055 (13) | 0.001 (2) | 0.004 (2) |
N2 | 0.069 (2) | 0.0400 (19) | 0.057 (2) | −0.0111 (15) | 0.003 (2) | 0.010 (2) |
O1 | 0.074 (2) | 0.0531 (17) | 0.0686 (18) | −0.0232 (13) | −0.0030 (13) | 0.0137 (12) |
C22 | 0.082 (3) | 0.066 (2) | 0.126 (4) | −0.041 (2) | −0.020 (3) | 0.017 (3) |
N2B | 0.073 (10) | 0.029 (8) | 0.042 (8) | −0.011 (6) | 0.004 (8) | 0.008 (7) |
O1B | 0.085 (8) | 0.045 (6) | 0.047 (6) | −0.028 (5) | −0.003 (5) | −0.002 (5) |
C22B | 0.096 (13) | 0.070 (10) | 0.090 (14) | −0.050 (9) | −0.018 (13) | 0.000 (12) |
N1—C7 | 1.470 (3) | C2—C3 | 1.536 (5) |
N1—C1 | 1.472 (3) | C2—H2 | 0.9800 |
N1—H1N | 0.94 (3) | C3—C4 | 1.519 (5) |
C1—C9 | 1.518 (3) | C3—H3A | 0.9700 |
C1—C2 | 1.549 (4) | C3—H3B | 0.9700 |
C1—C2B | 1.563 (15) | C4—C5 | 1.525 (5) |
C1—H1 | 0.9800 | C4—H4A | 0.9700 |
C7—C15 | 1.515 (3) | C4—H4B | 0.9700 |
C7—C6 | 1.552 (4) | C5—C6 | 1.536 (5) |
C7—C6B | 1.570 (15) | C5—H5A | 0.9700 |
C7—H7 | 0.9800 | C5—H5B | 0.9700 |
C9—C14 | 1.389 (3) | C6—C8 | 1.477 (4) |
C9—C10 | 1.390 (3) | C6—H6 | 0.9800 |
C10—C11 | 1.374 (3) | C8—N2 | 1.280 (5) |
C10—H10 | 0.9300 | C2B—C8B | 1.483 (16) |
C11—C12 | 1.357 (4) | C2B—C3B | 1.548 (17) |
C11—H11 | 0.9300 | C2B—H2B | 0.9800 |
C12—C13 | 1.380 (4) | C3B—C4B | 1.513 (17) |
C12—H12 | 0.9300 | C3B—H3C | 0.9700 |
C13—C14 | 1.386 (3) | C3B—H3D | 0.9700 |
C13—H13 | 0.9300 | C4B—C5B | 1.520 (17) |
C14—C21 | 1.505 (3) | C4B—H4C | 0.9700 |
C15—C20 | 1.375 (3) | C4B—H4D | 0.9700 |
C15—C16 | 1.406 (3) | C5B—C6B | 1.543 (17) |
C16—C17 | 1.385 (3) | C5B—H5C | 0.9700 |
C16—C23 | 1.506 (3) | C5B—H5D | 0.9700 |
C17—C18 | 1.355 (4) | C6B—C8B | 1.478 (16) |
C17—H17 | 0.9300 | C6B—H6B | 0.9800 |
C18—C19 | 1.362 (3) | C8B—N2B | 1.275 (16) |
C18—H18 | 0.9300 | N2—O1 | 1.424 (4) |
C19—C20 | 1.372 (3) | O1—C22 | 1.422 (4) |
C19—H19 | 0.9300 | C22—H22A | 0.9600 |
C20—H20 | 0.9300 | C22—H22B | 0.9600 |
C21—H21A | 0.9600 | C22—H22C | 0.9600 |
C21—H21B | 0.9600 | N2B—O1B | 1.422 (13) |
C21—H21C | 0.9600 | O1B—C22B | 1.414 (14) |
C23—H23A | 0.9600 | C22B—H22D | 0.9600 |
C23—H23B | 0.9600 | C22B—H22E | 0.9600 |
C23—H23C | 0.9600 | C22B—H22F | 0.9600 |
C2—C8 | 1.499 (4) | ||
C7—N1—C1 | 113.01 (16) | C3—C2—H2 | 108.0 |
C7—N1—H1N | 109.5 (17) | C1—C2—H2 | 108.0 |
C1—N1—H1N | 108.5 (18) | C4—C3—C2 | 113.6 (5) |
N1—C1—C9 | 111.47 (17) | C4—C3—H3A | 108.8 |
N1—C1—C2 | 108.2 (2) | C2—C3—H3A | 108.8 |
C9—C1—C2 | 113.3 (2) | C4—C3—H3B | 108.8 |
N1—C1—C2B | 119.8 (10) | C2—C3—H3B | 108.8 |
C9—C1—C2B | 101.5 (8) | H3A—C3—H3B | 107.7 |
N1—C1—H1 | 107.9 | C3—C4—C5 | 112.3 (5) |
C9—C1—H1 | 107.9 | C3—C4—H4A | 109.2 |
C2—C1—H1 | 107.9 | C5—C4—H4A | 109.2 |
C2B—C1—H1 | 107.7 | C3—C4—H4B | 109.2 |
N1—C7—C15 | 111.35 (17) | C5—C4—H4B | 109.2 |
N1—C7—C6 | 110.8 (2) | H4A—C4—H4B | 107.9 |
C15—C7—C6 | 109.3 (2) | C4—C5—C6 | 113.9 (5) |
N1—C7—C6B | 101.4 (9) | C4—C5—H5A | 108.8 |
C15—C7—C6B | 123.3 (9) | C6—C5—H5A | 108.8 |
N1—C7—H7 | 108.5 | C4—C5—H5B | 108.8 |
C15—C7—H7 | 108.5 | C6—C5—H5B | 108.8 |
C6—C7—H7 | 108.5 | H5A—C5—H5B | 107.7 |
C6B—C7—H7 | 102.9 | C8—C6—C5 | 108.9 (4) |
C14—C9—C10 | 118.7 (2) | C8—C6—C7 | 104.3 (3) |
C14—C9—C1 | 121.0 (2) | C5—C6—C7 | 117.0 (5) |
C10—C9—C1 | 120.3 (2) | C8—C6—H6 | 108.8 |
C11—C10—C9 | 121.9 (2) | C5—C6—H6 | 108.8 |
C11—C10—H10 | 119.1 | C7—C6—H6 | 108.8 |
C9—C10—H10 | 119.1 | N2—C8—C6 | 117.6 (4) |
C12—C11—C10 | 119.7 (3) | N2—C8—C2 | 130.4 (4) |
C12—C11—H11 | 120.1 | C6—C8—C2 | 112.0 (3) |
C10—C11—H11 | 120.1 | C8B—C2B—C3B | 106.1 (18) |
C11—C12—C13 | 119.2 (3) | C8B—C2B—C1 | 100.6 (16) |
C11—C12—H12 | 120.4 | C3B—C2B—C1 | 112 (3) |
C13—C12—H12 | 120.4 | C8B—C2B—H2B | 112.5 |
C12—C13—C14 | 122.4 (2) | C3B—C2B—H2B | 112.5 |
C12—C13—H13 | 118.8 | C1—C2B—H2B | 112.5 |
C14—C13—H13 | 118.8 | C4B—C3B—C2B | 114 (2) |
C13—C14—C9 | 118.1 (2) | C4B—C3B—H3C | 108.7 |
C13—C14—C21 | 118.8 (2) | C2B—C3B—H3C | 108.7 |
C9—C14—C21 | 123.0 (2) | C4B—C3B—H3D | 108.7 |
C20—C15—C16 | 117.7 (2) | C2B—C3B—H3D | 108.7 |
C20—C15—C7 | 120.9 (2) | H3C—C3B—H3D | 107.6 |
C16—C15—C7 | 121.3 (2) | C3B—C4B—C5B | 115 (2) |
C17—C16—C15 | 118.7 (2) | C3B—C4B—H4C | 108.5 |
C17—C16—C23 | 118.9 (2) | C5B—C4B—H4C | 108.5 |
C15—C16—C23 | 122.4 (2) | C3B—C4B—H4D | 108.5 |
C18—C17—C16 | 122.4 (2) | C5B—C4B—H4D | 108.5 |
C18—C17—H17 | 118.8 | H4C—C4B—H4D | 107.5 |
C16—C17—H17 | 118.8 | C4B—C5B—C6B | 115 (2) |
C17—C18—C19 | 119.0 (3) | C4B—C5B—H5C | 108.5 |
C17—C18—H18 | 120.5 | C6B—C5B—H5C | 108.5 |
C19—C18—H18 | 120.5 | C4B—C5B—H5D | 108.5 |
C18—C19—C20 | 120.2 (3) | C6B—C5B—H5D | 108.5 |
C18—C19—H19 | 119.9 | H5C—C5B—H5D | 107.5 |
C20—C19—H19 | 119.9 | C8B—C6B—C5B | 107.3 (19) |
C19—C20—C15 | 122.0 (2) | C8B—C6B—C7 | 122.3 (19) |
C19—C20—H20 | 119.0 | C5B—C6B—C7 | 105 (3) |
C15—C20—H20 | 119.0 | C8B—C6B—H6B | 107.0 |
C14—C21—H21A | 109.5 | C5B—C6B—H6B | 107.0 |
C14—C21—H21B | 109.5 | C7—C6B—H6B | 107.0 |
H21A—C21—H21B | 109.5 | N2B—C8B—C6B | 134 (2) |
C14—C21—H21C | 109.5 | N2B—C8B—C2B | 111.2 (19) |
H21A—C21—H21C | 109.5 | C6B—C8B—C2B | 113.1 (16) |
H21B—C21—H21C | 109.5 | C8—N2—O1 | 110.7 (4) |
C16—C23—H23A | 109.5 | C22—O1—N2 | 107.5 (3) |
C16—C23—H23B | 109.5 | C8B—N2B—O1B | 110.5 (14) |
H23A—C23—H23B | 109.5 | C22B—O1B—N2B | 108.2 (11) |
C16—C23—H23C | 109.5 | O1B—C22B—H22D | 109.5 |
H23A—C23—H23C | 109.5 | O1B—C22B—H22E | 109.5 |
H23B—C23—H23C | 109.5 | H22D—C22B—H22E | 109.5 |
C8—C2—C3 | 108.6 (4) | O1B—C22B—H22F | 109.5 |
C8—C2—C1 | 108.1 (3) | H22D—C22B—H22F | 109.5 |
C3—C2—C1 | 116.0 (6) | H22E—C22B—H22F | 109.5 |
C8—C2—H2 | 108.0 | ||
C7—N1—C1—C9 | −178.06 (17) | C17—C18—C19—C20 | 2.8 (5) |
C7—N1—C1—C2 | 56.7 (3) | C18—C19—C20—C15 | −1.6 (5) |
C1—N1—C7—C15 | 178.36 (18) | C16—C15—C20—C19 | −0.9 (4) |
C1—N1—C7—C6 | −59.8 (3) | C7—C15—C20—C19 | 175.5 (3) |
N1—C1—C9—C14 | 155.62 (19) | N1—C1—C2—C8 | −56.6 (4) |
C2—C1—C9—C14 | −82.1 (3) | C9—C1—C2—C8 | 179.3 (3) |
N1—C1—C9—C10 | −25.4 (3) | N1—C1—C2—C3 | 65.6 (4) |
C2—C1—C9—C10 | 97.0 (3) | C9—C1—C2—C3 | −58.5 (4) |
C14—C9—C10—C11 | 0.1 (3) | C8—C2—C3—C4 | 53.6 (8) |
C1—C9—C10—C11 | −178.9 (2) | C1—C2—C3—C4 | −68.4 (8) |
C9—C10—C11—C12 | 1.1 (4) | C2—C3—C4—C5 | −46.2 (12) |
C10—C11—C12—C13 | −0.9 (4) | C3—C4—C5—C6 | 45.7 (13) |
C11—C12—C13—C14 | −0.5 (4) | C4—C5—C6—C8 | −53.0 (9) |
C12—C13—C14—C9 | 1.7 (4) | C4—C5—C6—C7 | 64.9 (9) |
C12—C13—C14—C21 | −178.0 (2) | N1—C7—C6—C8 | 59.8 (4) |
C10—C9—C14—C13 | −1.4 (3) | C15—C7—C6—C8 | −177.2 (3) |
C1—C9—C14—C13 | 177.60 (19) | N1—C7—C6—C5 | −60.6 (4) |
C10—C9—C14—C21 | 178.3 (2) | C15—C7—C6—C5 | 62.4 (4) |
C1—C9—C14—C21 | −2.7 (3) | C5—C6—C8—N2 | −119.0 (6) |
N1—C7—C15—C20 | 25.6 (3) | C7—C6—C8—N2 | 115.4 (6) |
C6—C7—C15—C20 | −97.1 (3) | C5—C6—C8—C2 | 62.0 (6) |
N1—C7—C15—C16 | −158.2 (2) | C7—C6—C8—C2 | −63.6 (5) |
C6—C7—C15—C16 | 79.1 (3) | C3—C2—C8—N2 | 118.8 (8) |
C20—C15—C16—C17 | 2.1 (3) | C1—C2—C8—N2 | −114.6 (6) |
C7—C15—C16—C17 | −174.2 (2) | C3—C2—C8—C6 | −62.4 (6) |
C20—C15—C16—C23 | −176.7 (3) | C1—C2—C8—C6 | 64.2 (6) |
C7—C15—C16—C23 | 7.0 (4) | C6—C8—N2—O1 | −178.2 (4) |
C15—C16—C17—C18 | −1.0 (4) | C2—C8—N2—O1 | 0.6 (8) |
C23—C16—C17—C18 | 177.9 (3) | C8—N2—O1—C22 | −178.6 (5) |
C16—C17—C18—C19 | −1.5 (4) |
Experimental details
Crystal data | |
Chemical formula | C23H28N2O |
Mr | 348.47 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 298 |
a, b, c (Å) | 6.9700 (9), 15.3476 (16), 18.354 (2) |
β (°) | 94.622 (4) |
V (Å3) | 1957.0 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.07 |
Crystal size (mm) | 0.32 × 0.27 × 0.15 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2004) |
Tmin, Tmax | 0.977, 0.989 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12742, 4416, 2070 |
Rint | 0.043 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.060, 0.169, 1.01 |
No. of reflections | 4416 |
No. of parameters | 288 |
No. of restraints | 38 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.14, −0.19 |
Computer programs: APEX2 (Bruker, 2004) and SAINT (Bruker, 2004), SAINT (Bruker, 2004) and XPREP (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997).
Acknowledgements
This research was supported by the Corporate-affiliated Research Institute of Academic-Industrial-Institutional Cooperation Improvement (Business No. S7080008110). The authors acknowledge the Department of Chemistry, IIT Madras, for the X-ray data collection.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Nitrogen containing heterocyclic oximes and oxime ethers are very important molecules in the field of medicinal chemistry due to their broad spectrum of biological activities viz. antifungal, antibacterial, antimycobacterial, analgesic, antagonistic, anticancer, antiinflammatory, local anesthetic and hypotensive activity (Parthiban et al., 2009a,b, 2010a,b; Jeyaraman & Avila, 1981). Since the stereochemistry of bio-active molecules is a major criterion for their biological response, it is of immense help to establish the stereochemistry of the newly synthesized molecules. Accordingly, we have synthesized the title oxime ether to examine its conformation and orientation of the substituents.
In the crystal structure, the oxime unit is partially flipped thus inducing disorder for the oxime (N2/O1/C22) and also for the piperidine ring N1/C1/C2/C8/C6/C7 and the cylcohexane ring C2–C6/C8 over two orientations. The site occupancy ratio refined to 0.813 (2) to 0.186 (4). The tolyl rings do not participate in the disorder (Fig. 3).
An analysis of the six-membered piperidine ring gave the following: According to Nardelli (Nardelli, 1983), the smallest displacement asymmetry parameters q2 and q3 are 0.052 (4) and -0.614 (4) Å, respectively. According to Cremer and Pople (Cremer & Pople, 1975), the ring puckering parameters such as total puckering amplitude QT and phase angle θ are 0.616 (4) Å and 175.5 (4)°. Thus, all parameters strongly support a near ideal chair conformation for the piperidine ring N1/C1/C2/C8/C6/C7. Similarly, the analysis of cyclohexane ring C2–C6/C8 indicates that it also adopts a chair conformation. It is, however, deviating more from the ideal chair with puckering parameters QT and θ of 0.553 (7) Å and 169.2 (9)°, and q2 and q3 of 0.108 (9) and -0.543 (8) Å, respectively.
The torsion angles C8—C6—C7—C15 and C8—C2—C1—C9 of the ortho-tolyl rings are -177.2 (3) and 179.2 (3)° and they are orientated at an angle of 23.77 (3)° with respect to one another, whereas in its ketone precursor, 2,4-bis(2-methylphenyl)-3-azabicyclo[3.3.1]nonan-9-one, they are oriented at an angle of 29.4 (1)° (Vijayalakshmi et al., 2000). The crystal structure of the title compound is stabilized by intermolecular N—H···π interactions with N1—H1···Cg1 = 2.633 Å, (Cg: C15–C20; symmetry operator = 1 - x, 2 - y, -z.)
Thus, the detailed crystallographic study of asymmetry parameters, ring puckering parameters and torsion angles calculated for the title compound proves that the bicyclic moiety exists in a twin-chair conformation with equatorial orientation of the ortho-tolyl rings on both sides of the secondary amino group.