organic compounds
1,4-Bis(1H-benzimidazol-2-yl)benzene methanol monosolvate
aCollege of Chemistry and Materials Science, Fujian Normal University, Fuzhou, Fujian 350007, People's Republic of China
*Correspondence e-mail: shenlin@fjnu.edu.cn;_jiangbosu@163.com
The 20H14N4·CH4O, contains two independent half-molecules, each located on an inversion centre, and a methanol solvent molecule. The benzimidazolyl groups form different dihedral angles [24.0 (1) and 11.6 (1)°] with the plane of the central benzene ring in the two molecules. In the crystal, a two-dimensional network is formed through N—H⋯ N, N—H⋯O and O—H⋯N hydrogen-bonding interactions between the benzimidazole units and methanol solvent molecules. π–π stacking interactions also occur between the benzimidazole rings of adjacent molecules, with centroid–centroid distances of 3.720 (14) Å and interplanar distances of 3.53 (1) Å .
of the title compound, CRelated literature
For the synthesis of the title compound see: Wu et al. (2009). For the properties and applications of benzimidazoles, see: Tidwell et al. (1993); Salunke et al. (1994); Hoorn et al. (1995); van Berkel et al. (1995); Dinolfo et al. (2005); Yang et al. (2008). For structures of 1,4-bis(benzimidazol-2-yl)benzene analogues, see: Bei et al. (2000); Wu et al. (2009). For bond lengths and angles in similar structures, see: Matthews et al. (1996); Ozbey et al. (1998).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku, 2002); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL/PC (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.
Supporting information
https://doi.org/10.1107/S1600536810049238/bg2370sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810049238/bg2370Isup2.hkl
All reagents were of AR grade available commercially and used without further purification. To a mixed solvent of polyphosphoric acid (5 ml) and Phosphoric acid (15 ml, 85%) was added benzene-1,4-dicarboxylic acid (1.67 g, 10.0 mmol) and 1,2-diaminobenzene (2.16 g, 20.0 mmol). The mixture was heated slowly to 398 K, and the resulting solution was stirred at 453 K for five hours, and was poured into 300 ml water. Then the mixture was neutralized with 50% sodium hydroxide solution. The crude product was collected by filtration, dried and recrystallized (yield 67%). Crystals suitable for X-ray
were obtained by slow evaporation of a methanol solution.The (C)H and (N)H atoms of the title compound were placed in calculated positions (C—H = 0.93 and N—H = 0.86 Å) and refined using a riding model, with Uiso(H) = 1.2Ueq(C,N). The (C)H atoms of the methanol molecule were placed geometrically (C—H = 0.96 Å) and refined as riding, with Uiso(H) = 1.5Ueq(C). The (O)H atom of the methanol molecule was located in a difference Fourier map and refined with restrained O—H = 0.93 (3) Å and Uiso(H) = 1.5Ueq(O).
In earlier communications (Tidwell, et al., 1993; Salunke, et al., 1994; Hoorn, et al., 1995; van Berkel, et al., 1995; Dinolfo et al., 2005; Yang et al., 2008;) it has been reported that the benzimidazole moiety is an important heterocyclic ring not only because of its wide-ranging antivirus activity, its importance in selective ion-exchange resin, but also because of the interest in the coordination chemistry of azoles acting as ligands in transition metal compounds. However, the
of 1,4-bis(benzimidazol-2-yl)benzene analogues have rarely been reported (Bei, et al., 2000; Wu, et al., 2009;). Herein, we report the of the title compound, 1,4-bis(benzimidazol-2-yl)benzene methanol solvate (1).The structure of title compound is illustrated in Fig. 1. The
contains two different molecules halved by inversion centres at (1/2, 1/2, 1/2) and (0, 1, 0), respectively, and a methanol solvent. Bond lengths and angles have normal values and are comparable to those reported in similar structures (Matthews et al., 1996; Ozbey et al., 1998). The benzimidazoyl moieties form different dihedral angles with the plane of the central benzene ring (24.0 (1)°, 11.6 (1)° for A and B, respectively, Fig. 1). C—N bond lengths in the imidazole ring are in the range 1.328 (2)–1.391 (2) Å, shorter than typical single C—N bond lengths (ca 1.48 Å) and longer than typical C=N ones (ca 1.28 Å), indicating partial double-bond character. This can be interpreted in terms of conjugation in the heterocycle(Fig. 1, Table 1).In the solid state the 1,4-bis(Benzimidazol-2-yl)benzene moieties are connected to form a two-dimensional network through intermolecular N—H··· N, N—H···O and O—H···N hydrogen bonds (Fig.2, Table 2). Moreover, there exists π-π stacking interactions between the aromatic and imidazole rings of adjacent molecules, with intercentroid/interplanar distances of about 3.72 (1) Å /3.53 (1) Å, respectively.
For the synthesis of the title compound see: Wu et al. (2009). For the properties and applications of benzimidazoles, see: Tidwell et al. (1993); Salunke et al. (1994); Hoorn et al. (1995); van Berkel et al. (1995); Dinolfo et al. (2005); Yang et al. (2008). For structures of 1,4-bis(benzimidazol-2-yl)benzene analogues, see: Bei et al. (2000); Wu et al. (2009). For bond lengths and angles in similar structures, see: Matthews et al. (1996); Ozbey et al. (1998).
Data collection: CrystalClear (Rigaku, 2002); cell
CrystalClear (Rigaku, 2002); data reduction: CrystalClear (Rigaku, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL/PC (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C20H14N4·CH4O | Z = 2 |
Mr = 342.39 | F(000) = 360 |
Triclinic, P1 | Dx = 1.290 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.1730 (14) Å | Cell parameters from 3188 reflections |
b = 10.599 (2) Å | θ = 3.0–27.5° |
c = 12.260 (3) Å | µ = 0.08 mm−1 |
α = 76.21 (3)° | T = 293 K |
β = 88.37 (3)° | Prism, yellow |
γ = 77.01 (3)° | 0.31 × 0.16 × 0.12 mm |
V = 881.7 (3) Å3 |
Rigaku Mercury CCD diffractometer | 3139 independent reflections |
Radiation source: fine-focus sealed tube | 2577 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.016 |
ω scans | θmax = 25.2°, θmin = 1.7° |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2002) | h = −8→8 |
Tmin = 0.432, Tmax = 1.000 | k = −12→11 |
4565 measured reflections | l = −12→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.119 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.058P)2 + 0.2072P] where P = (Fo2 + 2Fc2)/3 |
3139 reflections | (Δ/σ)max = 0.001 |
240 parameters | Δρmax = 0.15 e Å−3 |
0 restraints | Δρmin = −0.19 e Å−3 |
C20H14N4·CH4O | γ = 77.01 (3)° |
Mr = 342.39 | V = 881.7 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.1730 (14) Å | Mo Kα radiation |
b = 10.599 (2) Å | µ = 0.08 mm−1 |
c = 12.260 (3) Å | T = 293 K |
α = 76.21 (3)° | 0.31 × 0.16 × 0.12 mm |
β = 88.37 (3)° |
Rigaku Mercury CCD diffractometer | 3139 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2002) | 2577 reflections with I > 2σ(I) |
Tmin = 0.432, Tmax = 1.000 | Rint = 0.016 |
4565 measured reflections |
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.119 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.15 e Å−3 |
3139 reflections | Δρmin = −0.19 e Å−3 |
240 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.4353 (2) | 0.72851 (15) | −0.20907 (11) | 0.0655 (4) | |
H1 | 0.466 (4) | 0.773 (3) | −0.157 (2) | 0.099 (9)* | |
N1 | 0.5137 (2) | 0.81332 (14) | −0.01667 (11) | 0.0462 (4) | |
N2 | 0.4593 (2) | 0.81243 (13) | 0.16469 (11) | 0.0431 (4) | |
H2A | 0.3999 | 0.8285 | 0.2236 | 0.052* | |
N3 | 0.3135 (2) | 0.86666 (13) | 0.37352 (11) | 0.0404 (3) | |
N4 | 0.34446 (19) | 0.84695 (13) | 0.55855 (11) | 0.0388 (3) | |
H4A | 0.3731 | 0.8106 | 0.6283 | 0.047* | |
C1 | 0.6775 (3) | 0.74325 (16) | 0.04753 (14) | 0.0438 (4) | |
C2 | 0.8563 (3) | 0.67915 (19) | 0.01578 (17) | 0.0569 (5) | |
H2B | 0.8818 | 0.6801 | −0.0592 | 0.068* | |
C3 | 0.9931 (3) | 0.6147 (2) | 0.09908 (19) | 0.0624 (6) | |
H3B | 1.1126 | 0.5717 | 0.0795 | 0.075* | |
C4 | 0.9576 (3) | 0.61209 (19) | 0.21223 (18) | 0.0584 (5) | |
H4B | 1.0536 | 0.5670 | 0.2660 | 0.070* | |
C5 | 0.7826 (3) | 0.67513 (18) | 0.24601 (16) | 0.0502 (5) | |
H5A | 0.7584 | 0.6733 | 0.3212 | 0.060* | |
C6 | 0.6448 (2) | 0.74142 (16) | 0.16162 (14) | 0.0412 (4) | |
C7 | 0.3870 (3) | 0.85267 (16) | 0.05676 (13) | 0.0403 (4) | |
C8 | 0.1892 (2) | 0.92809 (15) | 0.02858 (13) | 0.0394 (4) | |
C9 | 0.1321 (3) | 0.98685 (17) | −0.08376 (14) | 0.0456 (4) | |
H9A | 0.2204 | 0.9784 | −0.1401 | 0.055* | |
C10 | −0.0540 (3) | 1.05739 (17) | −0.11194 (13) | 0.0451 (4) | |
H10A | −0.0896 | 1.0955 | −0.1870 | 0.068* | |
C11 | 0.2500 (2) | 0.99128 (16) | 0.39671 (14) | 0.0394 (4) | |
C12 | 0.1739 (3) | 1.11565 (18) | 0.32434 (16) | 0.0541 (5) | |
H12A | 0.1647 | 1.1252 | 0.2472 | 0.065* | |
C13 | 0.1133 (3) | 1.22324 (18) | 0.37161 (18) | 0.0590 (5) | |
H13A | 0.0613 | 1.3065 | 0.3254 | 0.071* | |
C14 | 0.1282 (3) | 1.21002 (18) | 0.48749 (18) | 0.0551 (5) | |
H14A | 0.0844 | 1.2846 | 0.5164 | 0.066* | |
C15 | 0.2059 (3) | 1.08975 (17) | 0.55992 (16) | 0.0484 (4) | |
H15A | 0.2173 | 1.0816 | 0.6368 | 0.058* | |
C16 | 0.2667 (2) | 0.98057 (16) | 0.51249 (13) | 0.0379 (4) | |
C17 | 0.3672 (2) | 0.78377 (15) | 0.47268 (13) | 0.0358 (4) | |
C18 | 0.4362 (2) | 0.63846 (15) | 0.48859 (13) | 0.0356 (4) | |
C19 | 0.5493 (2) | 0.55926 (16) | 0.58125 (13) | 0.0421 (4) | |
H19C | 0.5829 | 0.5982 | 0.6360 | 0.063* | |
C20 | 0.3879 (3) | 0.57685 (16) | 0.40750 (14) | 0.0426 (4) | |
H20B | 0.3125 | 0.6281 | 0.3452 | 0.064* | |
C21 | 0.3492 (5) | 0.6260 (3) | −0.1553 (2) | 0.0971 (9) | |
H21A | 0.2685 | 0.6545 | −0.0979 | 0.117* | |
H21B | 0.4481 | 0.5516 | −0.1190 | 0.117* | |
H21C | 0.2739 | 0.5965 | −0.2043 | 0.174 (16)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.1004 (12) | 0.0687 (9) | 0.0363 (7) | −0.0341 (8) | 0.0012 (7) | −0.0157 (7) |
N1 | 0.0571 (9) | 0.0468 (8) | 0.0349 (8) | −0.0070 (7) | −0.0014 (7) | −0.0143 (6) |
N2 | 0.0505 (9) | 0.0457 (8) | 0.0305 (7) | −0.0023 (7) | −0.0035 (6) | −0.0115 (6) |
N3 | 0.0500 (8) | 0.0365 (7) | 0.0327 (7) | −0.0029 (6) | −0.0045 (6) | −0.0097 (6) |
N4 | 0.0495 (8) | 0.0389 (8) | 0.0280 (7) | −0.0082 (6) | −0.0005 (6) | −0.0093 (6) |
C1 | 0.0525 (11) | 0.0401 (9) | 0.0406 (9) | −0.0095 (8) | 0.0004 (8) | −0.0138 (7) |
C2 | 0.0608 (13) | 0.0566 (12) | 0.0539 (12) | −0.0086 (10) | 0.0084 (10) | −0.0195 (9) |
C3 | 0.0517 (12) | 0.0574 (12) | 0.0775 (15) | −0.0048 (10) | 0.0052 (11) | −0.0226 (11) |
C4 | 0.0532 (12) | 0.0514 (11) | 0.0690 (14) | −0.0085 (9) | −0.0142 (10) | −0.0125 (10) |
C5 | 0.0556 (12) | 0.0501 (11) | 0.0451 (10) | −0.0100 (9) | −0.0089 (8) | −0.0126 (8) |
C6 | 0.0481 (10) | 0.0373 (9) | 0.0392 (9) | −0.0085 (7) | −0.0028 (7) | −0.0117 (7) |
C7 | 0.0546 (10) | 0.0354 (8) | 0.0315 (8) | −0.0086 (7) | −0.0031 (7) | −0.0100 (7) |
C8 | 0.0524 (10) | 0.0336 (8) | 0.0320 (9) | −0.0073 (7) | −0.0060 (7) | −0.0087 (7) |
C9 | 0.0550 (11) | 0.0481 (10) | 0.0310 (9) | −0.0064 (8) | 0.0005 (7) | −0.0090 (7) |
C10 | 0.0585 (11) | 0.0451 (10) | 0.0281 (8) | −0.0057 (8) | −0.0069 (8) | −0.0063 (7) |
C11 | 0.0417 (9) | 0.0366 (9) | 0.0400 (9) | −0.0066 (7) | −0.0033 (7) | −0.0108 (7) |
C12 | 0.0682 (13) | 0.0429 (10) | 0.0471 (11) | −0.0068 (9) | −0.0139 (9) | −0.0063 (8) |
C13 | 0.0660 (13) | 0.0350 (10) | 0.0711 (14) | −0.0029 (9) | −0.0159 (10) | −0.0092 (9) |
C14 | 0.0553 (12) | 0.0420 (10) | 0.0718 (14) | −0.0055 (9) | −0.0010 (10) | −0.0254 (9) |
C15 | 0.0542 (11) | 0.0471 (10) | 0.0491 (10) | −0.0115 (8) | 0.0049 (8) | −0.0222 (8) |
C16 | 0.0392 (9) | 0.0377 (9) | 0.0386 (9) | −0.0096 (7) | 0.0021 (7) | −0.0118 (7) |
C17 | 0.0380 (9) | 0.0388 (9) | 0.0313 (8) | −0.0075 (7) | −0.0006 (6) | −0.0109 (7) |
C18 | 0.0380 (9) | 0.0366 (8) | 0.0313 (8) | −0.0063 (7) | −0.0011 (7) | −0.0082 (7) |
C19 | 0.0541 (11) | 0.0405 (9) | 0.0332 (9) | −0.0089 (8) | −0.0084 (7) | −0.0122 (7) |
C20 | 0.0526 (10) | 0.0392 (9) | 0.0337 (9) | −0.0063 (8) | −0.0122 (7) | −0.0064 (7) |
C21 | 0.141 (3) | 0.107 (2) | 0.0643 (16) | −0.072 (2) | 0.0164 (16) | −0.0224 (15) |
O1—C21 | 1.391 (3) | C9—C10 | 1.384 (3) |
O1—H1 | 0.93 (3) | C9—H9A | 0.9300 |
N1—C7 | 1.331 (2) | C10—C8i | 1.400 (2) |
N1—C1 | 1.391 (2) | C10—H10A | 0.9300 |
N2—C7 | 1.368 (2) | C11—C16 | 1.403 (2) |
N2—C6 | 1.378 (2) | C11—C12 | 1.403 (2) |
N2—H2A | 0.8600 | C12—C13 | 1.380 (3) |
N3—C17 | 1.328 (2) | C12—H12A | 0.9300 |
N3—C11 | 1.391 (2) | C13—C14 | 1.399 (3) |
N4—C17 | 1.3640 (19) | C13—H13A | 0.9300 |
N4—C16 | 1.385 (2) | C14—C15 | 1.376 (3) |
N4—H4A | 0.8600 | C14—H14A | 0.9300 |
C1—C2 | 1.401 (3) | C15—C16 | 1.395 (2) |
C1—C6 | 1.408 (2) | C15—H15A | 0.9300 |
C2—C3 | 1.377 (3) | C17—C18 | 1.475 (2) |
C2—H2B | 0.9300 | C18—C19 | 1.395 (2) |
C3—C4 | 1.398 (3) | C18—C20 | 1.402 (2) |
C3—H3B | 0.9300 | C19—C20ii | 1.386 (2) |
C4—C5 | 1.385 (3) | C19—H19C | 0.9300 |
C4—H4B | 0.9300 | C20—C19ii | 1.386 (2) |
C5—C6 | 1.393 (2) | C20—H20B | 0.9300 |
C5—H5A | 0.9300 | C21—H21A | 0.9600 |
C7—C8 | 1.469 (2) | C21—H21B | 0.9600 |
C8—C10i | 1.400 (2) | C21—H21C | 0.9600 |
C8—C9 | 1.400 (2) | ||
C21—O1—H1 | 109.8 (16) | C8i—C10—H10A | 119.7 |
C7—N1—C1 | 104.98 (14) | N3—C11—C16 | 110.02 (14) |
C7—N2—C6 | 107.32 (14) | N3—C11—C12 | 130.11 (16) |
C7—N2—H2A | 126.3 | C16—C11—C12 | 119.85 (16) |
C6—N2—H2A | 126.3 | C13—C12—C11 | 117.72 (18) |
C17—N3—C11 | 104.91 (13) | C13—C12—H12A | 121.1 |
C17—N4—C16 | 107.26 (13) | C11—C12—H12A | 121.1 |
C17—N4—H4A | 126.4 | C12—C13—C14 | 121.53 (18) |
C16—N4—H4A | 126.4 | C12—C13—H13A | 119.2 |
N1—C1—C2 | 130.63 (17) | C14—C13—H13A | 119.2 |
N1—C1—C6 | 109.80 (15) | C15—C14—C13 | 121.84 (17) |
C2—C1—C6 | 119.57 (17) | C15—C14—H14A | 119.1 |
C3—C2—C1 | 117.88 (19) | C13—C14—H14A | 119.1 |
C3—C2—H2B | 121.1 | C14—C15—C16 | 116.80 (17) |
C1—C2—H2B | 121.1 | C14—C15—H15A | 121.6 |
C2—C3—C4 | 121.92 (19) | C16—C15—H15A | 121.6 |
C2—C3—H3B | 119.0 | N4—C16—C15 | 132.62 (16) |
C4—C3—H3B | 119.0 | N4—C16—C11 | 105.12 (14) |
C5—C4—C3 | 121.46 (19) | C15—C16—C11 | 122.22 (16) |
C5—C4—H4B | 119.3 | N3—C17—N4 | 112.68 (14) |
C3—C4—H4B | 119.3 | N3—C17—C18 | 123.53 (14) |
C4—C5—C6 | 116.64 (18) | N4—C17—C18 | 123.74 (14) |
C4—C5—H5A | 121.7 | C19—C18—C20 | 118.34 (15) |
C6—C5—H5A | 121.7 | C19—C18—C17 | 122.54 (14) |
N2—C6—C5 | 132.09 (16) | C20—C18—C17 | 119.12 (14) |
N2—C6—C1 | 105.38 (15) | C20ii—C19—C18 | 120.63 (15) |
C5—C6—C1 | 122.52 (17) | C20ii—C19—H19C | 119.7 |
N1—C7—N2 | 112.51 (15) | C18—C19—H19C | 119.7 |
N1—C7—C8 | 125.12 (15) | C19ii—C20—C18 | 121.03 (15) |
N2—C7—C8 | 122.36 (15) | C19ii—C20—H20B | 119.5 |
C10i—C8—C9 | 118.54 (16) | C18—C20—H20B | 119.5 |
C10i—C8—C7 | 121.45 (15) | O1—C21—H21A | 109.0 |
C9—C8—C7 | 120.00 (16) | O1—C21—H21B | 108.1 |
C10—C9—C8 | 120.80 (16) | H21A—C21—H21B | 107.6 |
C10—C9—H9A | 119.6 | O1—C21—H21C | 114.6 |
C8—C9—H9A | 119.6 | H21A—C21—H21C | 108.7 |
C9—C10—C8i | 120.66 (15) | H21B—C21—H21C | 108.7 |
C9—C10—H10A | 119.7 |
Symmetry codes: (i) −x, −y+2, −z; (ii) −x+1, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.93 (3) | 1.93 (3) | 2.829 (2) | 162 (2) |
N2—H2A···N3 | 0.86 | 2.03 | 2.873 (2) | 168 |
N4—H4A···O1iii | 0.86 | 1.99 | 2.855 (2) | 179 |
Symmetry code: (iii) x, y, z+1. |
Experimental details
Crystal data | |
Chemical formula | C20H14N4·CH4O |
Mr | 342.39 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 7.1730 (14), 10.599 (2), 12.260 (3) |
α, β, γ (°) | 76.21 (3), 88.37 (3), 77.01 (3) |
V (Å3) | 881.7 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.31 × 0.16 × 0.12 |
Data collection | |
Diffractometer | Rigaku Mercury CCD |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2002) |
Tmin, Tmax | 0.432, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4565, 3139, 2577 |
Rint | 0.016 |
(sin θ/λ)max (Å−1) | 0.600 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.119, 1.04 |
No. of reflections | 3139 |
No. of parameters | 240 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.15, −0.19 |
Computer programs: CrystalClear (Rigaku, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL/PC (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.93 (3) | 1.93 (3) | 2.829 (2) | 162 (2) |
N2—H2A···N3 | 0.86 | 2.03 | 2.873 (2) | 168.3 |
N4—H4A···O1i | 0.86 | 1.99 | 2.855 (2) | 178.9 |
Symmetry code: (i) x, y, z+1. |
Acknowledgements
This work was supported by the National Natural Science Foundation of China (No. 20771024), the Natural Science Foundation of Fujian Province (No. 2008 J0142) and the Key Project Fund of Science and Technology of Fujian Province (No. 2008I0013).
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
In earlier communications (Tidwell, et al., 1993; Salunke, et al., 1994; Hoorn, et al., 1995; van Berkel, et al., 1995; Dinolfo et al., 2005; Yang et al., 2008;) it has been reported that the benzimidazole moiety is an important heterocyclic ring not only because of its wide-ranging antivirus activity, its importance in selective ion-exchange resin, but also because of the interest in the coordination chemistry of azoles acting as ligands in transition metal compounds. However, the crystal structure of 1,4-bis(benzimidazol-2-yl)benzene analogues have rarely been reported (Bei, et al., 2000; Wu, et al., 2009;). Herein, we report the crystal structure of the title compound, 1,4-bis(benzimidazol-2-yl)benzene methanol solvate (1).
The structure of title compound is illustrated in Fig. 1. The asymmetric unit contains two different molecules halved by inversion centres at (1/2, 1/2, 1/2) and (0, 1, 0), respectively, and a methanol solvent. Bond lengths and angles have normal values and are comparable to those reported in similar structures (Matthews et al., 1996; Ozbey et al., 1998). The benzimidazoyl moieties form different dihedral angles with the plane of the central benzene ring (24.0 (1)°, 11.6 (1)° for A and B, respectively, Fig. 1). C—N bond lengths in the imidazole ring are in the range 1.328 (2)–1.391 (2) Å, shorter than typical single C—N bond lengths (ca 1.48 Å) and longer than typical C=N ones (ca 1.28 Å), indicating partial double-bond character. This can be interpreted in terms of conjugation in the heterocycle(Fig. 1, Table 1).
In the solid state the 1,4-bis(Benzimidazol-2-yl)benzene moieties are connected to form a two-dimensional network through intermolecular N—H··· N, N—H···O and O—H···N hydrogen bonds (Fig.2, Table 2). Moreover, there exists π-π stacking interactions between the aromatic and imidazole rings of adjacent molecules, with intercentroid/interplanar distances of about 3.72 (1) Å /3.53 (1) Å, respectively.