metal-organic compounds
Diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato-κ2N3,O4)cobalt(II) 3.5-hydrate
aCollege of Food Science and Technology, Guangdong Ocean University, Zhanjiang 524088, People's Republic of China, and bCollege of Science, Guangdong Ocean University, Zhanjiang 524088, People's Republic of China
*Correspondence e-mail: songwd60@163.com
In the title complex, [Co(C8H9N2O4)2(H2O)2]·3.5H2O, the CoII cation is six-coordinated by two H2pimda− ligands (H3pimda is 2-propyl-1H-imidazole-4,5-carboxylic acid) and two water molecules in a distorted octahedral environment. The crystal structures features a three-dimensional network stabilized by extensive O—H⋯O and N—H⋯O hydrogen bonds. The propyl groups of the ligands are disordered over two sets of sites with refined occupancies of 0.673 (8):0.327 (8) and 0.621 (17):0.379 (17). One of the water molecules is located on a site with half-occupancy.
Related literature
For our past work based on H3pimda, see: Yan et al. (2010); Li, Dong et al. (2010); Song et al. (2010); He et al. (2010); Fan et al. (2010); Li, Miao et al. (2010); Li, Song et al. (2010).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536810052785/bt5437sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810052785/bt5437Isup2.hkl
A mixture of Co(NO3)2 (0.5 mmol, 0.06 g) and 2-propyl-1H-imidazole-4,5-dicarboxylic acid(0.5 mmol, 0.99 g) in 15 ml of H2O solution was sealed in an autoclave equipped with a Teflon liner (20 ml) and then heated at 433K for 4 days. Crystals of the title compound were obtained by slow evaporation of the solvent at room temperature.
Water H atoms were located in a difference Fourier map and were allowed to ride on the parent atom, with Uiso(H) = 1.5Ueq(O). Carboxyl H atoms were located in a difference map and refined with distance restraints, Uiso(H) = 1.5Ueq(O). Other H atoms were placed at calculated positions and were treated as riding on parent atoms with C—H = 0.96 (methyl), 0.97 (methylene) and N—H = 0.86 Å, Uiso(H) = 1.2 or 1.5Ueq(C,N). The propyl groups of H3pimda are disordered over two sites with refined occupancies of 0.673 (8):0.327 (8) and 0.621 (17):0.379 (17). C—C distance restraints were applied for the disordered components. The O3W water molecule is located close to an inversion centre, its occupancy factor was refined to 0.49 (1) and was fixed as 0.5 at the final refinements.
The 2-propyl-1H-imidazole-4,5-carboxylate (H3pimda) ligand has been used to obtain new metal-organic complexes by our research group, such as poly[diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato-k3 N3, O4,O5)calcium(II)] (Song et al., 2010), [diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato-k2N3,O4) manganese(II)]N,N-dimethylformamide (Yan et al., 2010), Diaquabis(4-carboxy-2-propyl-1H-imidazole-5-carboxylato- k2N3,O4)copper(II) N,N-dimethylformamide disolvate (He et al., 2010), Diaquabis(5-carboxy-2-propyl-1H-imidazole- 4-carboxylato-k2N3,O4)nickel(II) tetrahedrate (Fan et al., 2010), Diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato- k2N3,O4)-manganese(II) 3.5-hydrate (Li, Miao et al., 2010), Diaquabis (5-carboxy-2-propyl-1H-imidazole-4-carboxylato-K2N3,O4)zinc(II) 3.5-hydrate (Li, Song et al. 2010) and Diaquabis(5-carboxy-2-propyl-1H- imidazole-4-carboxylato-k2N3,O4)cadmium(II) 3.5-hydrate (Li, Dong et al. 2010). In this paper, we report the synthesis and structure of a new Co(II) complex based the same ligand.
As illustrated in figure 1, the title complex molecule is isomorphous with Ni(II), Mn(II), Cd(II) and Zn(II) analogues (Fan et al., 2010; Li, Dong et al., 2010; Li, Song et al., 2010; Li, Miao et al., 2010), Similar structural description applies to the present isomorphous complex. The CoII is six-coordinated in a distorted octahedral geometry. the H3pimda acts as a bidentate mode to chelate the center Co(II). one carboxy group of the ligand was delocalized and the other was protonated, indicated by the difference of the bond lengths. The dihedral angle between the two imidazole rings is 84.2 (2) %A. In the
the three-dimensional supramolecular framework is stabilized by extensive O—H···O and N—H···O hydrogen bonds.The propyl groups of H3pimda are disordered over two sets of sites with refined occupiencies of 0.673 (8):0.327 (8) and 0.621 (17): 0.379 (17). One of the water molecules is half occupied.For our past work based on H3pimda, see: Yan et al. (2010); Li, Dong et al. (2010); Song et al. (2010); He et al. (2010); Fan et al. (2010); Li, Miao et al. (2010); Li, Song et al. (2010).
Data collection: SMART (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The structure of the title compound, showing the atomic numbering scheme. Non-H atoms are shown with 30% probability displacement ellipsoids. |
[Co(C8H9N2O4)2(H2O)2]·3.5H2O | Z = 2 |
Mr = 552.36 | F(000) = 576 |
Triclinic, P1 | Dx = 1.499 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 10.405 (1) Å | Cell parameters from 1702 reflections |
b = 10.6131 (11) Å | θ = 2.5–25.9° |
c = 11.2529 (13) Å | µ = 0.77 mm−1 |
α = 82.371 (1)° | T = 298 K |
β = 83.743 (1)° | Cube, red |
γ = 87.330 (2)° | 0.18 × 0.09 × 0.07 mm |
V = 1223.7 (2) Å3 |
Bruker SMART 1000 CCD area-detector diffractometer | 4249 independent reflections |
Radiation source: fine-focus sealed tube | 2522 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.034 |
φ and ω scans | θmax = 25.0°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | h = −12→11 |
Tmin = 0.873, Tmax = 0.948 | k = −12→11 |
6529 measured reflections | l = −13→12 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.050 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.101 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0305P)2] where P = (Fo2 + 2Fc2)/3 |
4249 reflections | (Δ/σ)max = 0.001 |
376 parameters | Δρmax = 0.33 e Å−3 |
18 restraints | Δρmin = −0.31 e Å−3 |
[Co(C8H9N2O4)2(H2O)2]·3.5H2O | γ = 87.330 (2)° |
Mr = 552.36 | V = 1223.7 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 10.405 (1) Å | Mo Kα radiation |
b = 10.6131 (11) Å | µ = 0.77 mm−1 |
c = 11.2529 (13) Å | T = 298 K |
α = 82.371 (1)° | 0.18 × 0.09 × 0.07 mm |
β = 83.743 (1)° |
Bruker SMART 1000 CCD area-detector diffractometer | 4249 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | 2522 reflections with I > 2σ(I) |
Tmin = 0.873, Tmax = 0.948 | Rint = 0.034 |
6529 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | 18 restraints |
wR(F2) = 0.101 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.33 e Å−3 |
4249 reflections | Δρmin = −0.31 e Å−3 |
376 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Co1 | 0.34903 (6) | 0.79029 (6) | 0.19293 (6) | 0.0468 (2) | |
N1 | 0.3265 (3) | 0.7131 (3) | 0.3764 (3) | 0.0447 (9) | |
N2 | 0.3046 (3) | 0.6416 (4) | 0.5685 (3) | 0.0548 (11) | |
H2 | 0.2910 | 0.6408 | 0.6453 | 0.066* | |
N3 | 0.1480 (3) | 0.7861 (3) | 0.1738 (3) | 0.0419 (9) | |
N4 | −0.0526 (3) | 0.7781 (4) | 0.1332 (3) | 0.0504 (10) | |
H4 | −0.1231 | 0.7478 | 0.1171 | 0.060* | |
O1 | 0.3958 (3) | 0.5942 (3) | 0.1833 (3) | 0.0525 (8) | |
O2 | 0.4033 (3) | 0.4039 (3) | 0.2939 (3) | 0.0629 (9) | |
O3 | 0.3743 (3) | 0.3174 (3) | 0.5125 (3) | 0.0670 (10) | |
H3 | 0.3830 | 0.3458 | 0.4408 | 0.100* | |
O7W | 0.3316 (3) | 0.3924 (3) | 0.6857 (3) | 0.0687 (11) | |
O5 | 0.2850 (3) | 0.9854 (3) | 0.2050 (3) | 0.0533 (9) | |
O6 | 0.1184 (3) | 1.1214 (3) | 0.1846 (3) | 0.0633 (10) | |
O7 | −0.1073 (3) | 1.1143 (3) | 0.1400 (3) | 0.0606 (9) | |
H7 | −0.0327 | 1.1136 | 0.1571 | 0.091* | |
O8 | −0.2424 (3) | 0.9744 (3) | 0.1005 (3) | 0.0585 (9) | |
O1W | 0.3850 (3) | 0.8336 (3) | 0.0107 (3) | 0.0766 (12) | |
H1W | 0.3418 | 0.8937 | −0.0259 | 0.115* | |
H2W | 0.4514 | 0.8160 | −0.0359 | 0.115* | |
O2W | 0.5401 (3) | 0.8259 (3) | 0.2132 (3) | 0.0758 (12) | |
H4W | 0.5741 | 0.7575 | 0.2459 | 0.114* | |
H3W | 0.6004 | 0.8732 | 0.1786 | 0.114* | |
O3W | 0.5950 (3) | 0.7723 (3) | 0.8703 (3) | 0.0881 (12) | |
H5W | 0.5992 | 0.7238 | 0.8155 | 0.132* | |
H6W | 0.6319 | 0.8410 | 0.8414 | 0.132* | |
O4W | 0.2706 (4) | 0.6669 (4) | 0.8096 (3) | 0.1170 (16) | |
H7W | 0.2264 | 0.7287 | 0.8359 | 0.176* | |
H8W | 0.2895 | 0.6117 | 0.8675 | 0.176* | |
O5W | 0.7616 (4) | 0.6532 (4) | 0.0420 (4) | 0.1161 (15) | |
H9W | 0.7321 | 0.7065 | −0.0124 | 0.174* | |
H10W | 0.7077 | 0.6476 | 0.1048 | 0.174* | |
O6W | 0.4094 (5) | 0.5155 (6) | 0.9607 (5) | 0.0591 (18) | 0.50 |
H12W | 0.4516 | 0.5578 | 1.0016 | 0.089* | 0.50 |
H11W | 0.3534 | 0.4759 | 1.0109 | 0.089* | 0.50 |
C1 | 0.3847 (4) | 0.5225 (5) | 0.2824 (4) | 0.0453 (12) | |
C2 | 0.3472 (4) | 0.5846 (4) | 0.3905 (4) | 0.0388 (11) | |
C3 | 0.3330 (4) | 0.5379 (4) | 0.5099 (4) | 0.0424 (11) | |
C4 | 0.3452 (4) | 0.4105 (5) | 0.5768 (5) | 0.0503 (13) | |
C5 | 0.3013 (5) | 0.7456 (5) | 0.4860 (5) | 0.0585 (14) | |
C6 | 0.2961 (17) | 0.880 (3) | 0.514 (2) | 0.073 (6) | 0.673 (8) |
H6A | 0.3453 | 0.9326 | 0.4496 | 0.088* | 0.673 (8) |
H6B | 0.3353 | 0.8828 | 0.5880 | 0.088* | 0.673 (8) |
C7 | 0.1592 (11) | 0.9306 (11) | 0.5282 (9) | 0.090 (3) | 0.673 (8) |
H7A | 0.1126 | 0.8861 | 0.5997 | 0.108* | 0.673 (8) |
H7B | 0.1159 | 0.9180 | 0.4589 | 0.108* | 0.673 (8) |
C8 | 0.1612 (10) | 1.0747 (8) | 0.5395 (9) | 0.128 (5) | 0.673 (8) |
H8A | 0.2085 | 1.0867 | 0.6055 | 0.192* | 0.673 (8) |
H8B | 0.0742 | 1.1075 | 0.5537 | 0.192* | 0.673 (8) |
H8C | 0.2023 | 1.1188 | 0.4662 | 0.192* | 0.673 (8) |
C9 | 0.1692 (5) | 1.0100 (5) | 0.1877 (4) | 0.0476 (12) | |
C10 | 0.0912 (4) | 0.9051 (4) | 0.1699 (4) | 0.0406 (11) | |
C11 | −0.0345 (4) | 0.9016 (4) | 0.1443 (4) | 0.0410 (11) | |
C12 | −0.1370 (5) | 1.0008 (5) | 0.1268 (4) | 0.0485 (13) | |
C13 | 0.0583 (4) | 0.7107 (5) | 0.1515 (4) | 0.0478 (12) | |
C14 | 0.064 (3) | 0.569 (3) | 0.1696 (16) | 0.054 (5) | 0.621 (17) |
H14A | 0.1520 | 0.5390 | 0.1479 | 0.064* | 0.621 (17) |
H14B | 0.0087 | 0.5375 | 0.1170 | 0.064* | 0.621 (17) |
C15 | 0.022 (2) | 0.517 (2) | 0.2987 (18) | 0.068 (6) | 0.621 (17) |
H15A | −0.0693 | 0.5370 | 0.3172 | 0.081* | 0.621 (17) |
H15B | 0.0697 | 0.5567 | 0.3521 | 0.081* | 0.621 (17) |
C16 | 0.0448 (10) | 0.3732 (14) | 0.3208 (11) | 0.099 (5) | 0.621 (17) |
H16A | 0.0004 | 0.3336 | 0.2659 | 0.148* | 0.621 (17) |
H16B | 0.0127 | 0.3423 | 0.4021 | 0.148* | 0.621 (17) |
H16C | 0.1359 | 0.3532 | 0.3083 | 0.148* | 0.621 (17) |
C6' | 0.237 (3) | 0.867 (5) | 0.522 (4) | 0.067 (11) | 0.327 (8) |
H6'1 | 0.1850 | 0.8512 | 0.5990 | 0.080* | 0.327 (8) |
H6'2 | 0.1827 | 0.9061 | 0.4619 | 0.080* | 0.327 (8) |
C7' | 0.350 (2) | 0.954 (2) | 0.532 (2) | 0.083 (7) | 0.327 (8) |
H7'1 | 0.4079 | 0.9571 | 0.4579 | 0.099* | 0.327 (8) |
H7'2 | 0.3148 | 1.0395 | 0.5379 | 0.099* | 0.327 (8) |
C8' | 0.426 (2) | 0.9112 (19) | 0.637 (2) | 0.118 (9) | 0.327 (8) |
H8'1 | 0.3673 | 0.8984 | 0.7099 | 0.177* | 0.327 (8) |
H8'2 | 0.4856 | 0.9752 | 0.6444 | 0.177* | 0.327 (8) |
H8'3 | 0.4721 | 0.8329 | 0.6252 | 0.177* | 0.327 (8) |
C14' | 0.083 (5) | 0.576 (5) | 0.122 (3) | 0.055 (8) | 0.379 (17) |
H14C | 0.1738 | 0.5519 | 0.1256 | 0.066* | 0.379 (17) |
H14D | 0.0623 | 0.5708 | 0.0407 | 0.066* | 0.379 (17) |
C15' | −0.0004 (18) | 0.4828 (17) | 0.212 (2) | 0.068 (6) | 0.379 (17) |
H15C | −0.0910 | 0.5058 | 0.2064 | 0.082* | 0.379 (17) |
H15D | 0.0148 | 0.3974 | 0.1907 | 0.082* | 0.379 (17) |
C16' | 0.029 (4) | 0.484 (4) | 0.342 (3) | 0.083 (12) | 0.379 (17) |
H16D | 0.0090 | 0.4031 | 0.3881 | 0.125* | 0.379 (17) |
H16E | −0.0218 | 0.5500 | 0.3768 | 0.125* | 0.379 (17) |
H16F | 0.1194 | 0.4990 | 0.3429 | 0.125* | 0.379 (17) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.0410 (4) | 0.0498 (4) | 0.0465 (4) | 0.0032 (3) | −0.0074 (3) | 0.0067 (3) |
N1 | 0.047 (2) | 0.045 (2) | 0.042 (2) | 0.0015 (18) | −0.0092 (18) | −0.001 (2) |
N2 | 0.063 (3) | 0.062 (3) | 0.037 (2) | 0.011 (2) | −0.0069 (19) | −0.002 (2) |
N3 | 0.039 (2) | 0.038 (2) | 0.047 (2) | 0.0006 (18) | −0.0086 (18) | 0.0025 (18) |
N4 | 0.039 (2) | 0.054 (3) | 0.057 (3) | −0.002 (2) | −0.0136 (19) | 0.005 (2) |
O1 | 0.058 (2) | 0.059 (2) | 0.0373 (19) | 0.0130 (16) | −0.0062 (15) | 0.0021 (16) |
O2 | 0.090 (3) | 0.046 (2) | 0.053 (2) | 0.0097 (19) | −0.0150 (18) | −0.0059 (17) |
O3 | 0.087 (3) | 0.052 (2) | 0.059 (2) | 0.002 (2) | −0.0148 (19) | 0.0103 (19) |
O7W | 0.066 (2) | 0.086 (3) | 0.045 (2) | 0.0101 (19) | −0.0042 (18) | 0.0201 (19) |
O5 | 0.0476 (19) | 0.049 (2) | 0.064 (2) | −0.0059 (16) | −0.0147 (16) | −0.0017 (16) |
O6 | 0.060 (2) | 0.044 (2) | 0.087 (3) | 0.0017 (17) | −0.0118 (18) | −0.0077 (19) |
O7 | 0.049 (2) | 0.056 (2) | 0.076 (3) | 0.0130 (18) | −0.0102 (17) | −0.0079 (19) |
O8 | 0.0412 (19) | 0.063 (2) | 0.067 (2) | 0.0035 (17) | −0.0112 (17) | 0.0136 (18) |
O1W | 0.061 (2) | 0.099 (3) | 0.054 (2) | 0.0337 (19) | 0.0069 (17) | 0.026 (2) |
O2W | 0.044 (2) | 0.081 (3) | 0.092 (3) | −0.0128 (18) | −0.0180 (18) | 0.040 (2) |
O3W | 0.080 (3) | 0.082 (3) | 0.104 (3) | −0.030 (2) | 0.029 (2) | −0.042 (2) |
O4W | 0.156 (4) | 0.133 (4) | 0.067 (3) | 0.057 (3) | −0.025 (3) | −0.041 (3) |
O5W | 0.105 (3) | 0.131 (4) | 0.129 (4) | 0.012 (3) | −0.060 (3) | −0.041 (3) |
O6W | 0.066 (4) | 0.061 (4) | 0.052 (4) | −0.008 (3) | −0.009 (3) | −0.012 (3) |
C1 | 0.041 (3) | 0.047 (3) | 0.048 (3) | 0.003 (2) | −0.011 (2) | −0.002 (3) |
C2 | 0.034 (2) | 0.042 (3) | 0.039 (3) | 0.001 (2) | −0.007 (2) | 0.001 (2) |
C3 | 0.033 (2) | 0.049 (3) | 0.044 (3) | 0.002 (2) | −0.007 (2) | 0.000 (2) |
C4 | 0.037 (3) | 0.064 (4) | 0.047 (3) | 0.001 (2) | −0.010 (2) | 0.007 (3) |
C5 | 0.073 (4) | 0.051 (4) | 0.051 (3) | 0.011 (3) | −0.010 (3) | −0.007 (3) |
C6 | 0.089 (16) | 0.069 (11) | 0.062 (8) | 0.002 (15) | −0.006 (11) | −0.008 (7) |
C7 | 0.105 (9) | 0.076 (8) | 0.087 (8) | 0.014 (7) | −0.009 (6) | −0.012 (6) |
C8 | 0.176 (11) | 0.061 (7) | 0.140 (10) | 0.024 (7) | 0.016 (8) | −0.020 (6) |
C9 | 0.049 (3) | 0.046 (3) | 0.046 (3) | 0.000 (3) | −0.004 (2) | 0.002 (2) |
C10 | 0.038 (3) | 0.042 (3) | 0.041 (3) | −0.002 (2) | −0.005 (2) | 0.002 (2) |
C11 | 0.043 (3) | 0.036 (3) | 0.042 (3) | −0.001 (2) | −0.003 (2) | 0.002 (2) |
C12 | 0.045 (3) | 0.052 (4) | 0.043 (3) | 0.001 (3) | −0.001 (2) | 0.007 (3) |
C13 | 0.046 (3) | 0.043 (3) | 0.053 (3) | 0.001 (2) | −0.011 (2) | 0.001 (2) |
C14 | 0.051 (10) | 0.048 (10) | 0.063 (14) | −0.004 (7) | −0.016 (11) | −0.001 (13) |
C15 | 0.066 (8) | 0.050 (10) | 0.082 (17) | 0.004 (6) | −0.017 (11) | 0.016 (11) |
C16 | 0.091 (8) | 0.055 (9) | 0.143 (11) | 0.000 (6) | −0.010 (7) | 0.008 (8) |
C6' | 0.07 (3) | 0.07 (2) | 0.060 (16) | 0.02 (3) | −0.01 (2) | −0.007 (14) |
C7' | 0.102 (19) | 0.072 (17) | 0.073 (15) | 0.001 (14) | −0.011 (12) | −0.009 (13) |
C8' | 0.128 (19) | 0.101 (17) | 0.13 (2) | −0.005 (14) | 0.002 (16) | −0.031 (15) |
C14' | 0.053 (13) | 0.047 (12) | 0.06 (2) | −0.003 (10) | −0.010 (18) | 0.01 (2) |
C15' | 0.071 (11) | 0.051 (12) | 0.079 (17) | −0.001 (9) | −0.009 (10) | 0.001 (10) |
C16' | 0.074 (13) | 0.09 (3) | 0.08 (2) | −0.009 (17) | −0.030 (14) | 0.032 (15) |
Co1—O1W | 2.038 (3) | C5—C6' | 1.51 (5) |
Co1—O2W | 2.083 (3) | C6—C7 | 1.500 (19) |
Co1—N1 | 2.110 (4) | C6—H6A | 0.9700 |
Co1—N3 | 2.129 (3) | C6—H6B | 0.9700 |
Co1—O1 | 2.130 (3) | C7—C8 | 1.552 (13) |
Co1—O5 | 2.163 (3) | C7—H7A | 0.9700 |
N1—C5 | 1.319 (5) | C7—H7B | 0.9700 |
N1—C2 | 1.362 (5) | C8—H8A | 0.9600 |
N2—C5 | 1.347 (5) | C8—H8B | 0.9600 |
N2—C3 | 1.361 (5) | C8—H8C | 0.9600 |
N2—H2 | 0.8600 | C9—C10 | 1.455 (6) |
N3—C13 | 1.323 (5) | C10—C11 | 1.373 (5) |
N3—C10 | 1.366 (5) | C11—C12 | 1.473 (6) |
N4—C13 | 1.349 (5) | C13—C14 | 1.49 (3) |
N4—C11 | 1.357 (5) | C13—C14' | 1.52 (6) |
N4—H4 | 0.8600 | C14—C15 | 1.51 (2) |
O1—C1 | 1.261 (5) | C14—H14A | 0.9700 |
O2—C1 | 1.256 (5) | C14—H14B | 0.9700 |
O3—C4 | 1.306 (6) | C15—C16 | 1.52 (2) |
O3—H3 | 0.8200 | C15—H15A | 0.9700 |
O7W—C4 | 1.209 (5) | C15—H15B | 0.9700 |
O5—C9 | 1.252 (5) | C16—H16A | 0.9600 |
O6—C9 | 1.271 (5) | C16—H16B | 0.9600 |
O7—C12 | 1.289 (5) | C16—H16C | 0.9600 |
O7—H7 | 0.8200 | C6'—C7' | 1.54 (5) |
O8—C12 | 1.221 (5) | C6'—H6'1 | 0.9700 |
O1W—H1W | 0.8500 | C6'—H6'2 | 0.9700 |
O1W—H2W | 0.8500 | C7'—C8' | 1.51 (3) |
O2W—H4W | 0.8500 | C7'—H7'1 | 0.9700 |
O2W—H3W | 0.8500 | C7'—H7'2 | 0.9700 |
O3W—H5W | 0.8500 | C8'—H8'1 | 0.9600 |
O3W—H6W | 0.8500 | C8'—H8'2 | 0.9600 |
O4W—H7W | 0.8499 | C8'—H8'3 | 0.9600 |
O4W—H8W | 0.8499 | C14'—C15' | 1.54 (4) |
O5W—H9W | 0.8499 | C14'—H14C | 0.9700 |
O5W—H10W | 0.8503 | C14'—H14D | 0.9700 |
O6W—H12W | 0.8501 | C15'—C16' | 1.53 (5) |
O6W—H11W | 0.8503 | C15'—H15C | 0.9700 |
C1—C2 | 1.467 (6) | C15'—H15D | 0.9700 |
C2—C3 | 1.364 (5) | C16'—H16D | 0.9600 |
C3—C4 | 1.465 (6) | C16'—H16E | 0.9600 |
C5—C6 | 1.50 (3) | C16'—H16F | 0.9600 |
O1W—Co1—O2W | 90.34 (12) | C8—C7—H7B | 110.0 |
O1W—Co1—N1 | 169.71 (14) | H7A—C7—H7B | 108.4 |
O2W—Co1—N1 | 88.21 (12) | O5—C9—O6 | 122.9 (5) |
O1W—Co1—N3 | 89.35 (12) | O5—C9—C10 | 117.7 (4) |
O2W—Co1—N3 | 170.64 (14) | O6—C9—C10 | 119.5 (4) |
N1—Co1—N3 | 93.72 (13) | N3—C10—C11 | 110.0 (4) |
O1W—Co1—O1 | 91.72 (13) | N3—C10—C9 | 118.4 (4) |
O2W—Co1—O1 | 91.42 (12) | C11—C10—C9 | 131.6 (4) |
N1—Co1—O1 | 78.13 (13) | N4—C11—C10 | 105.1 (4) |
N3—Co1—O1 | 97.94 (13) | N4—C11—C12 | 122.1 (4) |
O1W—Co1—O5 | 89.43 (12) | C10—C11—C12 | 132.7 (4) |
O2W—Co1—O5 | 93.14 (12) | O8—C12—O7 | 123.5 (5) |
N1—Co1—O5 | 100.82 (13) | O8—C12—C11 | 120.6 (5) |
N3—Co1—O5 | 77.50 (13) | O7—C12—C11 | 116.0 (4) |
O1—Co1—O5 | 175.29 (11) | N3—C13—N4 | 110.3 (4) |
C5—N1—C2 | 106.3 (4) | N3—C13—C14 | 126.2 (12) |
C5—N1—Co1 | 142.2 (3) | N4—C13—C14 | 122.2 (12) |
C2—N1—Co1 | 111.5 (3) | N3—C13—C14' | 125.0 (19) |
C5—N2—C3 | 108.6 (4) | N4—C13—C14' | 123.3 (19) |
C5—N2—H2 | 125.7 | C14—C13—C14' | 21.0 (15) |
C3—N2—H2 | 125.7 | C13—C14—C15 | 112 (2) |
C13—N3—C10 | 106.0 (4) | C13—C14—H14A | 109.3 |
C13—N3—Co1 | 142.2 (3) | C15—C14—H14A | 109.3 |
C10—N3—Co1 | 111.3 (3) | C13—C14—H14B | 109.3 |
C13—N4—C11 | 108.7 (4) | C15—C14—H14B | 109.3 |
C13—N4—H4 | 125.7 | H14A—C14—H14B | 108.0 |
C11—N4—H4 | 125.7 | C14—C15—C16 | 111 (2) |
C1—O1—Co1 | 115.7 (3) | C14—C15—H15A | 109.3 |
C4—O3—H3 | 109.5 | C16—C15—H15A | 109.3 |
C9—O5—Co1 | 114.9 (3) | C14—C15—H15B | 109.3 |
C12—O7—H7 | 109.5 | C16—C15—H15B | 109.3 |
Co1—O1W—H1W | 119.6 | H15A—C15—H15B | 108.0 |
Co1—O1W—H2W | 129.5 | C5—C6'—C7' | 105 (2) |
H1W—O1W—H2W | 108.4 | C5—C6'—H6'1 | 110.7 |
Co1—O2W—H4W | 107.6 | C7'—C6'—H6'1 | 110.7 |
Co1—O2W—H3W | 138.9 | C5—C6'—H6'2 | 110.7 |
H4W—O2W—H3W | 108.3 | C7'—C6'—H6'2 | 110.7 |
H5W—O3W—H6W | 108.6 | H6'1—C6'—H6'2 | 108.8 |
H7W—O4W—H8W | 110.7 | C8'—C7'—C6' | 114 (3) |
H9W—O5W—H10W | 109.1 | C8'—C7'—H7'1 | 108.8 |
H12W—O6W—H11W | 106.1 | C6'—C7'—H7'1 | 108.8 |
O2—C1—O1 | 124.7 (5) | C8'—C7'—H7'2 | 108.8 |
O2—C1—C2 | 119.0 (4) | C6'—C7'—H7'2 | 108.8 |
O1—C1—C2 | 116.4 (4) | H7'1—C7'—H7'2 | 107.7 |
N1—C2—C3 | 110.0 (4) | C7'—C8'—H8'1 | 109.5 |
N1—C2—C1 | 118.2 (4) | C7'—C8'—H8'2 | 109.5 |
C3—C2—C1 | 131.7 (4) | H8'1—C8'—H8'2 | 109.5 |
N2—C3—C2 | 105.1 (4) | C7'—C8'—H8'3 | 109.5 |
N2—C3—C4 | 121.0 (4) | H8'1—C8'—H8'3 | 109.5 |
C2—C3—C4 | 133.9 (5) | H8'2—C8'—H8'3 | 109.5 |
O7W—C4—O3 | 121.6 (5) | C13—C14'—C15' | 110 (2) |
O7W—C4—C3 | 122.0 (5) | C13—C14'—H14C | 109.6 |
O3—C4—C3 | 116.4 (4) | C15'—C14'—H14C | 109.6 |
N1—C5—N2 | 110.1 (4) | C13—C14'—H14D | 109.6 |
N1—C5—C6 | 124.1 (10) | C15'—C14'—H14D | 109.6 |
N2—C5—C6 | 124.8 (10) | H14C—C14'—H14D | 108.1 |
N1—C5—C6' | 127.9 (19) | C16'—C15'—C14' | 112 (2) |
N2—C5—C6' | 119.5 (18) | C16'—C15'—H15C | 109.1 |
C6—C5—C6' | 24.0 (15) | C14'—C15'—H15C | 109.1 |
C5—C6—C7 | 111.0 (14) | C16'—C15'—H15D | 109.1 |
C5—C6—H6A | 109.4 | C14'—C15'—H15D | 109.1 |
C7—C6—H6A | 109.4 | H15C—C15'—H15D | 107.9 |
C5—C6—H6B | 109.4 | C15'—C16'—H16D | 109.5 |
C7—C6—H6B | 109.4 | C15'—C16'—H16E | 109.5 |
H6A—C6—H6B | 108.0 | H16D—C16'—H16E | 109.5 |
C6—C7—C8 | 108.5 (12) | C15'—C16'—H16F | 109.5 |
C6—C7—H7A | 110.0 | H16D—C16'—H16F | 109.5 |
C8—C7—H7A | 110.0 | H16E—C16'—H16F | 109.5 |
C6—C7—H7B | 110.0 | ||
O1W—Co1—N1—C5 | 165.8 (7) | C2—N1—C5—C6 | 168.5 (10) |
O2W—Co1—N1—C5 | 83.8 (5) | Co1—N1—C5—C6 | −9.7 (12) |
N3—Co1—N1—C5 | −87.1 (5) | C2—N1—C5—C6' | −162.0 (19) |
O1—Co1—N1—C5 | 175.6 (5) | Co1—N1—C5—C6' | 20 (2) |
O5—Co1—N1—C5 | −9.1 (5) | C3—N2—C5—N1 | 0.0 (5) |
O1W—Co1—N1—C2 | −12.3 (9) | C3—N2—C5—C6 | −168.8 (9) |
O2W—Co1—N1—C2 | −94.4 (3) | C3—N2—C5—C6' | 163.4 (19) |
N3—Co1—N1—C2 | 94.8 (3) | N1—C5—C6—C7 | 98.6 (14) |
O1—Co1—N1—C2 | −2.6 (3) | N2—C5—C6—C7 | −94.1 (16) |
O5—Co1—N1—C2 | 172.7 (3) | C6'—C5—C6—C7 | −9 (5) |
O1W—Co1—N3—C13 | 85.1 (5) | C5—C6—C7—C8 | −172.3 (11) |
O2W—Co1—N3—C13 | 173.2 (7) | Co1—O5—C9—O6 | −175.8 (3) |
N1—Co1—N3—C13 | −85.1 (5) | Co1—O5—C9—C10 | 3.9 (5) |
O1—Co1—N3—C13 | −6.6 (5) | C13—N3—C10—C11 | −0.3 (5) |
O5—Co1—N3—C13 | 174.6 (5) | Co1—N3—C10—C11 | 173.4 (3) |
O1W—Co1—N3—C10 | −84.9 (3) | C13—N3—C10—C9 | −178.1 (4) |
O2W—Co1—N3—C10 | 3.3 (10) | Co1—N3—C10—C9 | −4.5 (5) |
N1—Co1—N3—C10 | 104.9 (3) | O5—C9—C10—N3 | 0.4 (6) |
O1—Co1—N3—C10 | −176.5 (3) | O6—C9—C10—N3 | −179.9 (4) |
O5—Co1—N3—C10 | 4.7 (3) | O5—C9—C10—C11 | −176.8 (4) |
O1W—Co1—O1—C1 | −178.8 (3) | O6—C9—C10—C11 | 2.8 (7) |
O2W—Co1—O1—C1 | 90.8 (3) | C13—N4—C11—C10 | 0.0 (5) |
N1—Co1—O1—C1 | 3.0 (3) | C13—N4—C11—C12 | 178.7 (4) |
N3—Co1—O1—C1 | −89.2 (3) | N3—C10—C11—N4 | 0.2 (5) |
O5—Co1—O1—C1 | −74.6 (15) | C9—C10—C11—N4 | 177.6 (4) |
O1W—Co1—O5—C9 | 84.7 (3) | N3—C10—C11—C12 | −178.3 (4) |
O2W—Co1—O5—C9 | 175.0 (3) | C9—C10—C11—C12 | −0.9 (8) |
N1—Co1—O5—C9 | −96.2 (3) | N4—C11—C12—O8 | −0.6 (6) |
N3—Co1—O5—C9 | −4.8 (3) | C10—C11—C12—O8 | 177.6 (4) |
O1—Co1—O5—C9 | −19.6 (16) | N4—C11—C12—O7 | 180.0 (4) |
Co1—O1—C1—O2 | 177.2 (3) | C10—C11—C12—O7 | −1.8 (7) |
Co1—O1—C1—C2 | −2.7 (4) | C10—N3—C13—N4 | 0.2 (5) |
C5—N1—C2—C3 | 0.7 (5) | Co1—N3—C13—N4 | −170.0 (3) |
Co1—N1—C2—C3 | 179.5 (3) | C10—N3—C13—C14 | −167.0 (10) |
C5—N1—C2—C1 | −176.7 (4) | Co1—N3—C13—C14 | 22.7 (12) |
Co1—N1—C2—C1 | 2.1 (4) | C10—N3—C13—C14' | 167.2 (15) |
O2—C1—C2—N1 | −179.6 (4) | Co1—N3—C13—C14' | −3.1 (16) |
O1—C1—C2—N1 | 0.4 (5) | C11—N4—C13—N3 | −0.1 (5) |
O2—C1—C2—C3 | 3.8 (7) | C11—N4—C13—C14 | 167.7 (9) |
O1—C1—C2—C3 | −176.3 (4) | C11—N4—C13—C14' | −167.3 (15) |
C5—N2—C3—C2 | 0.4 (5) | N3—C13—C14—C15 | 83 (2) |
C5—N2—C3—C4 | 179.0 (4) | N4—C13—C14—C15 | −83 (2) |
N1—C2—C3—N2 | −0.7 (4) | C14'—C13—C14—C15 | 178 (10) |
C1—C2—C3—N2 | 176.2 (4) | C13—C14—C15—C16 | −172.5 (16) |
N1—C2—C3—C4 | −179.0 (4) | N1—C5—C6'—C7' | −95 (3) |
C1—C2—C3—C4 | −2.1 (8) | N2—C5—C6'—C7' | 105 (3) |
N2—C3—C4—O7W | −0.6 (6) | C6—C5—C6'—C7' | −5 (4) |
C2—C3—C4—O7W | 177.6 (4) | C5—C6'—C7'—C8' | −70 (3) |
N2—C3—C4—O3 | −179.1 (4) | N3—C13—C14'—C15' | 123 (2) |
C2—C3—C4—O3 | −1.0 (7) | N4—C13—C14'—C15' | −71 (3) |
C2—N1—C5—N2 | −0.4 (5) | C14—C13—C14'—C15' | 23 (6) |
Co1—N1—C5—N2 | −178.6 (3) | C13—C14'—C15'—C16' | −60 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O4W | 0.86 | 1.89 | 2.745 (5) | 171 |
N4—H4···O5Wi | 0.86 | 1.93 | 2.752 (5) | 160 |
O3—H3···O2 | 0.82 | 1.68 | 2.500 (4) | 179 |
O7—H7···O6 | 0.82 | 1.64 | 2.461 (4) | 176 |
O1W—H1W···O8ii | 0.85 | 1.87 | 2.715 (4) | 178 |
O1W—H2W···O3Wiii | 0.85 | 1.81 | 2.661 (4) | 177 |
O2W—H4W···O7Wiv | 0.85 | 1.94 | 2.791 (4) | 174 |
O2W—H3W···O8v | 0.85 | 2.05 | 2.897 (4) | 175 |
O3W—H5W···O2iv | 0.85 | 1.95 | 2.796 (5) | 172 |
O3W—H6W···O5vi | 0.85 | 2.05 | 2.895 (4) | 172 |
O3W—H6W···O6vi | 0.85 | 2.63 | 3.206 (4) | 127 |
O4W—H8W···O6W | 0.85 | 1.89 | 2.674 (7) | 152 |
O5W—H9W···O3Wiii | 0.85 | 2.08 | 2.867 (5) | 153 |
O5W—H10W···O7Wiv | 0.85 | 2.33 | 3.092 (5) | 149 |
O6W—H12W···O6Wvii | 0.85 | 1.68 | 2.162 (11) | 113 |
O6W—H12W···O1viii | 0.85 | 2.14 | 2.730 (6) | 126 |
O6W—H11W···O5Wiv | 0.85 | 2.05 | 2.588 (7) | 121 |
Symmetry codes: (i) x−1, y, z; (ii) −x, −y+2, −z; (iii) x, y, z−1; (iv) −x+1, −y+1, −z+1; (v) x+1, y, z; (vi) −x+1, −y+2, −z+1; (vii) −x+1, −y+1, −z+2; (viii) x, y, z+1. |
Experimental details
Crystal data | |
Chemical formula | [Co(C8H9N2O4)2(H2O)2]·3.5H2O |
Mr | 552.36 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 10.405 (1), 10.6131 (11), 11.2529 (13) |
α, β, γ (°) | 82.371 (1), 83.743 (1), 87.330 (2) |
V (Å3) | 1223.7 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.77 |
Crystal size (mm) | 0.18 × 0.09 × 0.07 |
Data collection | |
Diffractometer | Bruker SMART 1000 CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2004) |
Tmin, Tmax | 0.873, 0.948 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6529, 4249, 2522 |
Rint | 0.034 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.101, 1.03 |
No. of reflections | 4249 |
No. of parameters | 376 |
No. of restraints | 18 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.33, −0.31 |
Computer programs: SMART (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O4W | 0.86 | 1.89 | 2.745 (5) | 170.5 |
N4—H4···O5Wi | 0.86 | 1.93 | 2.752 (5) | 160.0 |
O3—H3···O2 | 0.82 | 1.68 | 2.500 (4) | 179.1 |
O7—H7···O6 | 0.82 | 1.64 | 2.461 (4) | 175.9 |
O1W—H1W···O8ii | 0.85 | 1.87 | 2.715 (4) | 177.7 |
O1W—H2W···O3Wiii | 0.85 | 1.81 | 2.661 (4) | 177.2 |
O2W—H4W···O7Wiv | 0.85 | 1.94 | 2.791 (4) | 174.3 |
O2W—H3W···O8v | 0.85 | 2.05 | 2.897 (4) | 174.8 |
O3W—H5W···O2iv | 0.85 | 1.95 | 2.796 (5) | 172.2 |
O3W—H6W···O5vi | 0.85 | 2.05 | 2.895 (4) | 172.0 |
O3W—H6W···O6vi | 0.85 | 2.63 | 3.206 (4) | 126.6 |
O4W—H8W···O6W | 0.85 | 1.89 | 2.674 (7) | 152.4 |
O5W—H9W···O3Wiii | 0.85 | 2.08 | 2.867 (5) | 153.0 |
O5W—H10W···O7Wiv | 0.85 | 2.33 | 3.092 (5) | 148.9 |
O6W—H12W···O6Wvii | 0.85 | 1.68 | 2.162 (11) | 113.4 |
O6W—H12W···O1viii | 0.85 | 2.14 | 2.730 (6) | 125.9 |
O6W—H11W···O5Wiv | 0.85 | 2.05 | 2.588 (7) | 120.9 |
Symmetry codes: (i) x−1, y, z; (ii) −x, −y+2, −z; (iii) x, y, z−1; (iv) −x+1, −y+1, −z+1; (v) x+1, y, z; (vi) −x+1, −y+2, −z+1; (vii) −x+1, −y+1, −z+2; (viii) x, y, z+1. |
Acknowledgements
The work was supported by the Nonprofit Industry Foundation of the National Ocean Administration of China (grant No. 2000905021), the Guangdong Oceanic Fisheries Technology Promotion Project [grant No. A2009003–018(c)], the Guangdong Chinese Academy of Science comprehensive strategic cooperation project (grant No. 2009B091300121), the Guangdong Province key project in the field of social development [grant No. A2009011–007(c)], the Science and Technology Department of Guangdong Province Project (grant No. 00087061110314018) and the Guangdong Natural Science Fundation (No. 9252408801000002).
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Yan, J.-B., Li, S.-J., Song, W.-D., Wang, H. & Miao, D.-L. (2010). Acta Cryst. E66, m99. Web of Science CSD CrossRef IUCr Journals Google Scholar
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The 2-propyl-1H-imidazole-4,5-carboxylate (H3pimda) ligand has been used to obtain new metal-organic complexes by our research group, such as poly[diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato-k3 N3, O4,O5)calcium(II)] (Song et al., 2010), [diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato-k2N3,O4) manganese(II)]N,N-dimethylformamide (Yan et al., 2010), Diaquabis(4-carboxy-2-propyl-1H-imidazole-5-carboxylato- k2N3,O4)copper(II) N,N-dimethylformamide disolvate (He et al., 2010), Diaquabis(5-carboxy-2-propyl-1H-imidazole- 4-carboxylato-k2N3,O4)nickel(II) tetrahedrate (Fan et al., 2010), Diaquabis(5-carboxy-2-propyl-1H-imidazole-4-carboxylato- k2N3,O4)-manganese(II) 3.5-hydrate (Li, Miao et al., 2010), Diaquabis (5-carboxy-2-propyl-1H-imidazole-4-carboxylato-K2N3,O4)zinc(II) 3.5-hydrate (Li, Song et al. 2010) and Diaquabis(5-carboxy-2-propyl-1H- imidazole-4-carboxylato-k2N3,O4)cadmium(II) 3.5-hydrate (Li, Dong et al. 2010). In this paper, we report the synthesis and structure of a new Co(II) complex based the same ligand.
As illustrated in figure 1, the title complex molecule is isomorphous with Ni(II), Mn(II), Cd(II) and Zn(II) analogues (Fan et al., 2010; Li, Dong et al., 2010; Li, Song et al., 2010; Li, Miao et al., 2010), Similar structural description applies to the present isomorphous complex. The CoII is six-coordinated in a distorted octahedral geometry. the H3pimda acts as a bidentate mode to chelate the center Co(II). one carboxy group of the ligand was delocalized and the other was protonated, indicated by the difference of the bond lengths. The dihedral angle between the two imidazole rings is 84.2 (2) %A. In the crystal structure, the three-dimensional supramolecular framework is stabilized by extensive O—H···O and N—H···O hydrogen bonds.The propyl groups of H3pimda are disordered over two sets of sites with refined occupiencies of 0.673 (8):0.327 (8) and 0.621 (17): 0.379 (17). One of the water molecules is half occupied.