metal-organic compounds
μ-Decanedioato-bis[aquabis(1,10-phenanthroline-κ2N,N′)manganese(II)] dinitrate–sebacic acid–water (1/1/2)
aKey Laboratory for Information Systems of Mountainous Areas and Protection of the Economical Environment of Guizhou Province, Guizhou Normal University, Guiyang 550001, People's Republic of China, and bCollege of Geographical and Environmental Sciences, Guizhou Normal University, Guiyang 550001, People's Republic of China
*Correspondence e-mail: fengyeqiang6699@126.com
In the title complex, [Mn2(C10H16O4)(C12H8N2)4(H2O)2](NO3)2·C10H18O4·2H2O, the contains one-half of the centrosymmetric dinuclear complex cation, one uncoordinated water molecule, one-half of a free sebaic acid (decanedioic acid) molecule that is also completed by inversion symmetry, and one disordered nitrate anion [occupancy ratio 0.454 (4):0.544 (6)]. The MnII atoms are each octahedrally surrounded by four N atoms from two 1,10-phenanthroline (phen) ligands, one O atom from one carbonyl group of the bridging sebacate ligand and one O atom of a water molecule. The is stabilized by intermolecular O—H⋯O hydrogen bonds.
Related literature
For applications of carboxylic metalorganic complexes, see: Lehn (2007); Wang et al. (2010); Fang & Zhang (2006). For related structures, see: Wei et al. (2002).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2006); cell SAINT (Bruker, 2006); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536810051615/bx2333sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810051615/bx2333Isup2.hkl
All reagents were used as received without purified. The title compound was obtained by adding sebacic acid (1 mmol) and 1,10-phenanthroline(phen) (2 mmol) in fifty percent ethanol solution (20 ml), then Mn(NO3)2 (1 mmol) dissolved in distilled water (10 ml) is slowly dripped into above solution, mixed round for five hours, filtrated, and single crystals were obtained after one week.
All H atoms attached to C atoms and O(hydroxyl) atom were fixed geometrically and treated as riding with C—H = 0.97 Å (methylene) or 0.93 Å (aromatic) and O—H = 0.85 Å with Uiso(H) = 1.2Ueq(C) or Uiso(H) = 1.5Ueq(O). H atoms of water molecule were located in a difference Fourier map and included in the subsequent
using restraints (O—H= 0.82 (1) Å and H···H= 1.30 (2) Å) with Uiso(H) = 1.5Ueq(O). The atom O5A and O6A are disordered. They were modelled using a split model with refined population parameters [O5A/O5B=0.456 (4)/0.544 (4); O6A/O6B=0.456 (4)/0.544 (4)].The design and synthesis of carboxylic metal-organic complexes have been an increasing interest for many years owing to their potential practical applications, such as fluorescence, magnetism (Wang, et al., 2010; Fang, et al., 2006; Lehn, et al., 2007). Interested in this field, herein, we report the
of a new manganeseII complex with the sebacic acid ligand. The contains a centrosymmetric dinuclear complex cation, one water molecule, a free sebacic acid and one nitrato anion. The Mn atoms are each octahedrally surrounded by four N atoms from two phen ligands, one O atom from one carbonyl group of the bridging sebacato ligand and one O atom of water molecule. The basal Mn—O and Mn—N bond lengths fall in the range 2.0934 (11)–2.1466 (11); 2.2821 (13)–2.3480 (13)Å respectively. The axial Mn—N bond lengths fall in the range 2.2596 (13)–2.3027 (14) Å. The sebasic acid molecule is linear and all C—C and C—O bond lengths are of normal values. The sebacate anion acts as monodentate ligand . The crystal structures is stabilized by three and four intermolecular and intramolecular O—H···O hydrogen bonds respectively, Fig.1. The phen ligands make a dihedral angle of 77.4 (3)°.For applications of carboxylic metalorganic complexes, see: Lehn (2007); Wang et al. (2010); Fang & Zhang (2006). For related structures, see: Wei et al. (2002).
Data collection: APEX2 (Bruker, 2006); cell
SAINT (Bruker, 2006); data reduction: SAINT (Bruker, 2006); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of the title complex, showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 50% probability level, hydrogen atoms were omitted for clarity. |
[Mn2(C10H16O4)(C12H8N2)4(H2O)2](NO3)2·C10H18O4·2H2O | Z = 1 |
Mr = 1429.00 | F(000) = 746 |
Triclinic, P1 | Dx = 1.413 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 11.6712 (3) Å | Cell parameters from 9906 reflections |
b = 12.5316 (3) Å | θ = 1.7–27.6° |
c = 12.8561 (3) Å | µ = 0.46 mm−1 |
α = 76.678 (1)° | T = 296 K |
β = 66.845 (1)° | Block, colorless |
γ = 81.971 (1)° | 0.58 × 0.33 × 0.13 mm |
V = 1679.79 (7) Å3 |
Bruker APEXII diffractometer | 7666 independent reflections |
Radiation source: fine-focus sealed tube | 6144 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.025 |
ω scans | θmax = 27.6°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Bruker, 2002) | h = −15→14 |
Tmin = 0.837, Tmax = 0.943 | k = −15→16 |
25302 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.036 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.085 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.030P)2 + 0.580P] where P = (Fo2 + 2Fc2)/3 |
7666 reflections | (Δ/σ)max < 0.001 |
449 parameters | Δρmax = 0.50 e Å−3 |
0 restraints | Δρmin = −0.38 e Å−3 |
[Mn2(C10H16O4)(C12H8N2)4(H2O)2](NO3)2·C10H18O4·2H2O | γ = 81.971 (1)° |
Mr = 1429.00 | V = 1679.79 (7) Å3 |
Triclinic, P1 | Z = 1 |
a = 11.6712 (3) Å | Mo Kα radiation |
b = 12.5316 (3) Å | µ = 0.46 mm−1 |
c = 12.8561 (3) Å | T = 296 K |
α = 76.678 (1)° | 0.58 × 0.33 × 0.13 mm |
β = 66.845 (1)° |
Bruker APEXII diffractometer | 7666 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2002) | 6144 reflections with I > 2σ(I) |
Tmin = 0.837, Tmax = 0.943 | Rint = 0.025 |
25302 measured reflections |
R[F2 > 2σ(F2)] = 0.036 | 0 restraints |
wR(F2) = 0.085 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.50 e Å−3 |
7666 reflections | Δρmin = −0.38 e Å−3 |
449 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Mn1 | 0.70121 (2) | 0.230330 (18) | 0.31787 (2) | 0.03465 (8) | |
O1 | 0.53707 (11) | 0.15166 (9) | 0.36166 (10) | 0.0456 (3) | |
O2 | 0.38982 (10) | 0.03550 (9) | 0.41943 (10) | 0.0441 (3) | |
O1W | 0.68822 (11) | 0.16789 (10) | 0.49202 (10) | 0.0474 (3) | |
H1A | 0.6574 | 0.1060 | 0.5275 | 0.071* | |
H1B | 0.7441 | 0.1750 | 0.5212 | 0.071* | |
N1 | 0.88153 (13) | 0.12483 (11) | 0.24456 (12) | 0.0423 (3) | |
N2 | 0.74524 (13) | 0.24656 (11) | 0.12571 (12) | 0.0407 (3) | |
N3 | 0.58719 (12) | 0.39148 (10) | 0.33027 (11) | 0.0370 (3) | |
N4 | 0.82861 (12) | 0.36202 (10) | 0.31342 (11) | 0.0381 (3) | |
C1 | 0.50113 (15) | 0.05984 (12) | 0.36745 (13) | 0.0339 (3) | |
C2 | 0.59493 (16) | −0.02534 (14) | 0.31001 (15) | 0.0413 (4) | |
H2A | 0.6080 | −0.0840 | 0.3690 | 0.050* | |
H2B | 0.6740 | 0.0081 | 0.2641 | 0.050* | |
C3 | 0.55376 (16) | −0.07434 (13) | 0.23259 (14) | 0.0409 (4) | |
H3A | 0.6146 | −0.1319 | 0.2030 | 0.049* | |
H3B | 0.4746 | −0.1076 | 0.2785 | 0.049* | |
C4 | 0.53961 (18) | 0.00960 (14) | 0.13196 (14) | 0.0453 (4) | |
H4A | 0.6167 | 0.0470 | 0.0894 | 0.054* | |
H4B | 0.4740 | 0.0640 | 0.1615 | 0.054* | |
C5 | 0.50857 (18) | −0.04110 (14) | 0.05008 (15) | 0.0478 (4) | |
H5A | 0.5750 | −0.0947 | 0.0199 | 0.057* | |
H5B | 0.4325 | −0.0799 | 0.0933 | 0.057* | |
C6 | 0.67555 (19) | 0.30097 (15) | 0.06869 (16) | 0.0524 (4) | |
H6A | 0.5980 | 0.3311 | 0.1103 | 0.063* | |
C7 | 0.7121 (2) | 0.31556 (18) | −0.05024 (18) | 0.0651 (6) | |
H7A | 0.6596 | 0.3537 | −0.0867 | 0.078* | |
C8 | 0.8255 (2) | 0.27326 (18) | −0.11219 (17) | 0.0654 (6) | |
H8A | 0.8516 | 0.2828 | −0.1919 | 0.078* | |
C9 | 1.0253 (2) | 0.1706 (2) | −0.11490 (19) | 0.0692 (6) | |
H9A | 1.0561 | 0.1789 | −0.1947 | 0.083* | |
C10 | 1.0960 (2) | 0.1170 (2) | −0.0567 (2) | 0.0711 (7) | |
H10A | 1.1759 | 0.0903 | −0.0974 | 0.085* | |
C11 | 1.1218 (2) | 0.04253 (18) | 0.1314 (2) | 0.0700 (6) | |
H11A | 1.2028 | 0.0157 | 0.0943 | 0.084* | |
C12 | 1.0713 (2) | 0.02624 (17) | 0.2480 (2) | 0.0679 (6) | |
H12A | 1.1171 | −0.0116 | 0.2914 | 0.081* | |
C13 | 0.94950 (19) | 0.06706 (14) | 0.30215 (18) | 0.0543 (5) | |
H13A | 0.9145 | 0.0531 | 0.3823 | 0.065* | |
C14 | 0.90359 (19) | 0.21517 (16) | −0.05620 (16) | 0.0539 (5) | |
C15 | 0.85812 (16) | 0.20248 (13) | 0.06474 (14) | 0.0412 (4) | |
C16 | 1.05239 (17) | 0.09953 (16) | 0.06647 (19) | 0.0556 (5) | |
C17 | 0.93227 (15) | 0.14120 (13) | 0.12730 (15) | 0.0418 (4) | |
C18 | 0.94555 (16) | 0.34774 (14) | 0.30703 (16) | 0.0472 (4) | |
H18A | 0.9895 | 0.2823 | 0.2891 | 0.057* | |
C19 | 1.00663 (18) | 0.42543 (16) | 0.32574 (18) | 0.0558 (5) | |
H19A | 1.0888 | 0.4114 | 0.3208 | 0.067* | |
C20 | 0.94419 (19) | 0.52166 (16) | 0.35118 (17) | 0.0550 (5) | |
H20A | 0.9829 | 0.5738 | 0.3652 | 0.066* | |
C21 | 0.7496 (2) | 0.64238 (14) | 0.38036 (16) | 0.0539 (5) | |
H21A | 0.7849 | 0.6969 | 0.3945 | 0.065* | |
C22 | 0.6327 (2) | 0.65874 (14) | 0.38290 (15) | 0.0522 (5) | |
H22A | 0.5887 | 0.7249 | 0.3979 | 0.063* | |
C23 | 0.45241 (18) | 0.59084 (15) | 0.36366 (15) | 0.0508 (4) | |
H23A | 0.4065 | 0.6569 | 0.3751 | 0.061* | |
C24 | 0.40184 (18) | 0.50752 (16) | 0.34740 (16) | 0.0524 (5) | |
H24A | 0.3222 | 0.5167 | 0.3455 | 0.063* | |
C25 | 0.47149 (16) | 0.40809 (14) | 0.33364 (15) | 0.0444 (4) | |
H25A | 0.4345 | 0.3505 | 0.3265 | 0.053* | |
C26 | 0.82112 (17) | 0.54230 (13) | 0.35622 (14) | 0.0449 (4) | |
C27 | 0.76600 (15) | 0.45891 (12) | 0.33745 (13) | 0.0368 (3) | |
C28 | 0.57400 (17) | 0.57670 (13) | 0.36306 (14) | 0.0431 (4) | |
C29 | 0.63978 (15) | 0.47586 (12) | 0.34317 (13) | 0.0359 (3) | |
O3 | 0.36732 (19) | 0.40660 (15) | 0.14822 (16) | 0.0929 (6) | |
O4 | 0.28810 (17) | 0.24951 (13) | 0.16774 (15) | 0.0837 (5) | |
H4C | 0.2729 | 0.2445 | 0.2389 | 0.126* | |
C30 | 0.3445 (2) | 0.34024 (18) | 0.1066 (2) | 0.0613 (5) | |
C31 | 0.3730 (2) | 0.35127 (18) | −0.01941 (19) | 0.0663 (6) | |
H31A | 0.4293 | 0.2905 | −0.0474 | 0.080* | |
H31B | 0.4147 | 0.4188 | −0.0610 | 0.080* | |
C32 | 0.2553 (2) | 0.35228 (17) | −0.04290 (18) | 0.0630 (5) | |
H32A | 0.2779 | 0.3504 | −0.1236 | 0.076* | |
H32B | 0.2111 | 0.2868 | 0.0026 | 0.076* | |
C33 | 0.1694 (2) | 0.45277 (16) | −0.01428 (18) | 0.0585 (5) | |
H33A | 0.1603 | 0.4618 | 0.0616 | 0.070* | |
H33B | 0.2089 | 0.5168 | −0.0692 | 0.070* | |
C34 | 0.0418 (2) | 0.44959 (16) | −0.01543 (17) | 0.0586 (5) | |
H34A | 0.0022 | 0.3852 | 0.0387 | 0.070* | |
H34B | 0.0503 | 0.4422 | −0.0917 | 0.070* | |
N5 | 0.91636 (17) | 0.22595 (15) | 0.58128 (14) | 0.0582 (4) | |
O5A | 0.8094 (5) | 0.2322 (5) | 0.6183 (5) | 0.0960 (12) | 0.456 (4) |
O6A | 0.9670 (4) | 0.1569 (6) | 0.5070 (6) | 0.0749 (10) | 0.456 (4) |
O5B | 0.8208 (4) | 0.2931 (4) | 0.6291 (4) | 0.0960 (12) | 0.544 (4) |
O6B | 0.9028 (4) | 0.1683 (5) | 0.5265 (5) | 0.0749 (10) | 0.544 (4) |
O7 | 1.00394 (16) | 0.24493 (15) | 0.60047 (16) | 0.0858 (5) | |
O2W | 0.23404 (16) | 0.21497 (15) | 0.39055 (14) | 0.0915 (6) | |
H2C | 0.2807 | 0.1610 | 0.4072 | 0.137* | |
H2D | 0.1631 | 0.2073 | 0.4453 | 0.137* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Mn1 | 0.03696 (14) | 0.03139 (12) | 0.03438 (13) | −0.00389 (9) | −0.01003 (10) | −0.00884 (10) |
O1 | 0.0437 (7) | 0.0372 (6) | 0.0569 (7) | −0.0086 (5) | −0.0166 (6) | −0.0115 (5) |
O2 | 0.0378 (6) | 0.0412 (6) | 0.0486 (7) | −0.0086 (5) | −0.0098 (5) | −0.0078 (5) |
O1W | 0.0556 (7) | 0.0497 (7) | 0.0394 (6) | −0.0212 (6) | −0.0201 (6) | 0.0020 (5) |
N1 | 0.0450 (8) | 0.0367 (7) | 0.0458 (8) | −0.0011 (6) | −0.0159 (7) | −0.0119 (6) |
N2 | 0.0434 (8) | 0.0408 (7) | 0.0376 (7) | −0.0067 (6) | −0.0122 (6) | −0.0098 (6) |
N3 | 0.0390 (7) | 0.0347 (7) | 0.0356 (7) | −0.0025 (6) | −0.0115 (6) | −0.0080 (6) |
N4 | 0.0399 (7) | 0.0329 (7) | 0.0387 (7) | −0.0045 (6) | −0.0112 (6) | −0.0062 (6) |
C1 | 0.0390 (9) | 0.0367 (8) | 0.0284 (7) | −0.0053 (7) | −0.0160 (7) | −0.0031 (6) |
C2 | 0.0416 (9) | 0.0411 (9) | 0.0445 (9) | −0.0006 (7) | −0.0184 (8) | −0.0115 (7) |
C3 | 0.0465 (9) | 0.0394 (8) | 0.0372 (9) | −0.0020 (7) | −0.0138 (7) | −0.0115 (7) |
C4 | 0.0561 (11) | 0.0425 (9) | 0.0383 (9) | −0.0007 (8) | −0.0173 (8) | −0.0116 (7) |
C5 | 0.0605 (11) | 0.0458 (9) | 0.0404 (9) | −0.0028 (8) | −0.0208 (8) | −0.0113 (8) |
C6 | 0.0587 (12) | 0.0532 (11) | 0.0496 (11) | −0.0059 (9) | −0.0248 (9) | −0.0084 (9) |
C7 | 0.0830 (16) | 0.0672 (13) | 0.0547 (12) | −0.0159 (12) | −0.0371 (12) | −0.0025 (11) |
C8 | 0.0900 (17) | 0.0706 (14) | 0.0373 (10) | −0.0302 (13) | −0.0197 (11) | −0.0062 (10) |
C9 | 0.0680 (14) | 0.0784 (15) | 0.0474 (12) | −0.0259 (12) | 0.0078 (11) | −0.0262 (11) |
C10 | 0.0484 (12) | 0.0748 (15) | 0.0726 (15) | −0.0157 (11) | 0.0129 (11) | −0.0374 (13) |
C11 | 0.0425 (11) | 0.0557 (12) | 0.105 (2) | 0.0026 (9) | −0.0155 (12) | −0.0288 (13) |
C12 | 0.0599 (13) | 0.0488 (11) | 0.1039 (19) | 0.0065 (10) | −0.0423 (14) | −0.0164 (12) |
C13 | 0.0625 (12) | 0.0409 (9) | 0.0649 (12) | 0.0035 (9) | −0.0297 (10) | −0.0137 (9) |
C14 | 0.0610 (12) | 0.0556 (11) | 0.0406 (10) | −0.0240 (9) | −0.0041 (9) | −0.0155 (9) |
C15 | 0.0445 (9) | 0.0391 (8) | 0.0377 (9) | −0.0137 (7) | −0.0064 (7) | −0.0124 (7) |
C16 | 0.0410 (10) | 0.0479 (10) | 0.0722 (13) | −0.0077 (8) | −0.0057 (9) | −0.0252 (10) |
C17 | 0.0391 (9) | 0.0365 (8) | 0.0476 (10) | −0.0092 (7) | −0.0068 (7) | −0.0165 (7) |
C18 | 0.0418 (10) | 0.0426 (9) | 0.0553 (11) | −0.0039 (8) | −0.0160 (8) | −0.0087 (8) |
C19 | 0.0467 (11) | 0.0579 (11) | 0.0655 (13) | −0.0139 (9) | −0.0218 (9) | −0.0092 (10) |
C20 | 0.0591 (12) | 0.0529 (11) | 0.0585 (12) | −0.0211 (9) | −0.0220 (10) | −0.0105 (9) |
C21 | 0.0723 (14) | 0.0375 (9) | 0.0505 (11) | −0.0141 (9) | −0.0160 (10) | −0.0121 (8) |
C22 | 0.0748 (14) | 0.0297 (8) | 0.0444 (10) | −0.0015 (8) | −0.0135 (9) | −0.0095 (7) |
C23 | 0.0590 (12) | 0.0407 (9) | 0.0433 (10) | 0.0123 (8) | −0.0144 (9) | −0.0079 (8) |
C24 | 0.0473 (10) | 0.0580 (11) | 0.0489 (11) | 0.0091 (9) | −0.0194 (9) | −0.0092 (9) |
C25 | 0.0437 (10) | 0.0474 (9) | 0.0423 (9) | −0.0001 (8) | −0.0158 (8) | −0.0109 (8) |
C26 | 0.0565 (11) | 0.0373 (8) | 0.0386 (9) | −0.0133 (8) | −0.0127 (8) | −0.0057 (7) |
C27 | 0.0447 (9) | 0.0321 (8) | 0.0295 (8) | −0.0070 (7) | −0.0089 (7) | −0.0042 (6) |
C28 | 0.0558 (11) | 0.0340 (8) | 0.0320 (8) | 0.0018 (7) | −0.0105 (7) | −0.0052 (7) |
C29 | 0.0455 (9) | 0.0295 (7) | 0.0277 (7) | −0.0032 (6) | −0.0093 (7) | −0.0037 (6) |
O3 | 0.1232 (16) | 0.0853 (12) | 0.0995 (13) | −0.0169 (11) | −0.0701 (12) | −0.0161 (10) |
O4 | 0.1072 (14) | 0.0677 (10) | 0.0714 (11) | −0.0128 (10) | −0.0318 (10) | −0.0026 (9) |
C30 | 0.0545 (12) | 0.0572 (12) | 0.0760 (15) | 0.0069 (10) | −0.0327 (11) | −0.0111 (11) |
C31 | 0.0625 (13) | 0.0583 (12) | 0.0690 (14) | −0.0039 (10) | −0.0136 (11) | −0.0145 (11) |
C32 | 0.0810 (15) | 0.0592 (12) | 0.0493 (11) | −0.0185 (11) | −0.0212 (11) | −0.0086 (10) |
C33 | 0.0711 (13) | 0.0553 (11) | 0.0552 (12) | −0.0178 (10) | −0.0295 (10) | −0.0034 (9) |
C34 | 0.0749 (14) | 0.0588 (11) | 0.0511 (11) | −0.0239 (10) | −0.0311 (11) | −0.0017 (9) |
N5 | 0.0613 (11) | 0.0704 (11) | 0.0484 (9) | −0.0119 (9) | −0.0267 (8) | −0.0056 (8) |
O5A | 0.0672 (16) | 0.135 (4) | 0.1006 (19) | 0.035 (3) | −0.0375 (13) | −0.064 (3) |
O6A | 0.087 (3) | 0.0818 (17) | 0.084 (2) | −0.006 (3) | −0.053 (3) | −0.0313 (14) |
O5B | 0.0672 (16) | 0.135 (4) | 0.1006 (19) | 0.035 (3) | −0.0375 (13) | −0.064 (3) |
O6B | 0.087 (3) | 0.0818 (17) | 0.084 (2) | −0.006 (3) | −0.053 (3) | −0.0313 (14) |
O7 | 0.0767 (11) | 0.1024 (13) | 0.1040 (13) | −0.0243 (10) | −0.0488 (10) | −0.0304 (11) |
O2W | 0.0707 (11) | 0.0983 (13) | 0.0730 (11) | 0.0261 (9) | −0.0143 (9) | 0.0041 (9) |
Mn1—O1 | 2.0934 (11) | C13—H13A | 0.9300 |
Mn1—O1W | 2.1462 (11) | C14—C15 | 1.409 (2) |
Mn1—N3 | 2.2596 (13) | C15—C17 | 1.436 (2) |
Mn1—N2 | 2.2821 (13) | C16—C17 | 1.404 (2) |
Mn1—N1 | 2.3027 (14) | C18—C19 | 1.397 (2) |
Mn1—N4 | 2.3480 (13) | C18—H18A | 0.9300 |
O1—C1 | 1.2556 (18) | C19—C20 | 1.357 (3) |
O2—C1 | 1.2496 (18) | C19—H19A | 0.9300 |
O1W—H1A | 0.8516 | C20—C26 | 1.402 (3) |
O1W—H1B | 0.8939 | C20—H20A | 0.9300 |
N1—C13 | 1.325 (2) | C21—C22 | 1.340 (3) |
N1—C17 | 1.362 (2) | C21—C26 | 1.431 (3) |
N2—C6 | 1.322 (2) | C21—H21A | 0.9300 |
N2—C15 | 1.356 (2) | C22—C28 | 1.430 (2) |
N3—C25 | 1.322 (2) | C22—H22A | 0.9300 |
N3—C29 | 1.3654 (19) | C23—C24 | 1.361 (3) |
N4—C18 | 1.324 (2) | C23—C28 | 1.403 (3) |
N4—C27 | 1.361 (2) | C23—H23A | 0.9300 |
C1—C2 | 1.511 (2) | C24—C25 | 1.397 (2) |
C2—C3 | 1.529 (2) | C24—H24A | 0.9300 |
C2—H2A | 0.9700 | C25—H25A | 0.9300 |
C2—H2B | 0.9700 | C26—C27 | 1.411 (2) |
C3—C4 | 1.516 (2) | C27—C29 | 1.434 (2) |
C3—H3A | 0.9700 | C28—C29 | 1.405 (2) |
C3—H3B | 0.9700 | O3—C30 | 1.194 (3) |
C4—C5 | 1.522 (2) | O4—C30 | 1.317 (3) |
C4—H4A | 0.9700 | O4—H4C | 0.8500 |
C4—H4B | 0.9700 | C30—C31 | 1.497 (3) |
C5—C5i | 1.514 (3) | C31—C32 | 1.517 (3) |
C5—H5A | 0.9700 | C31—H31A | 0.9700 |
C5—H5B | 0.9700 | C31—H31B | 0.9700 |
C6—C7 | 1.390 (3) | C32—C33 | 1.515 (3) |
C6—H6A | 0.9300 | C32—H32A | 0.9700 |
C7—C8 | 1.355 (3) | C32—H32B | 0.9700 |
C7—H7A | 0.9300 | C33—C34 | 1.502 (3) |
C8—C14 | 1.403 (3) | C33—H33A | 0.9700 |
C8—H8A | 0.9300 | C33—H33B | 0.9700 |
C9—C10 | 1.339 (3) | C34—C34ii | 1.512 (4) |
C9—C14 | 1.424 (3) | C34—H34A | 0.9700 |
C9—H9A | 0.9300 | C34—H34B | 0.9700 |
C10—C16 | 1.432 (3) | N5—O5A | 1.147 (6) |
C10—H10A | 0.9300 | N5—O6B | 1.182 (5) |
C11—C12 | 1.354 (3) | N5—O7 | 1.206 (2) |
C11—C16 | 1.399 (3) | N5—O5B | 1.329 (4) |
C11—H11A | 0.9300 | N5—O6A | 1.344 (7) |
C12—C13 | 1.396 (3) | O2W—H2C | 0.8500 |
C12—H12A | 0.9300 | O2W—H2D | 0.8500 |
O1—Mn1—O1W | 87.16 (5) | N2—C15—C14 | 122.20 (17) |
O1—Mn1—N3 | 88.76 (5) | N2—C15—C17 | 117.93 (14) |
O1W—Mn1—N3 | 102.95 (5) | C14—C15—C17 | 119.87 (16) |
O1—Mn1—N2 | 91.66 (5) | C11—C16—C17 | 117.1 (2) |
O1W—Mn1—N2 | 162.78 (5) | C11—C16—C10 | 124.2 (2) |
N3—Mn1—N2 | 94.19 (5) | C17—C16—C10 | 118.7 (2) |
O1—Mn1—N1 | 114.20 (5) | N1—C17—C16 | 122.60 (17) |
O1W—Mn1—N1 | 92.32 (5) | N1—C17—C15 | 117.97 (15) |
N3—Mn1—N1 | 153.19 (5) | C16—C17—C15 | 119.43 (17) |
N2—Mn1—N1 | 72.51 (5) | N4—C18—C19 | 123.66 (17) |
O1—Mn1—N4 | 157.92 (5) | N4—C18—H18A | 118.2 |
O1W—Mn1—N4 | 86.23 (4) | C19—C18—H18A | 118.2 |
N3—Mn1—N4 | 72.28 (5) | C20—C19—C18 | 118.94 (18) |
N2—Mn1—N4 | 100.72 (5) | C20—C19—H19A | 120.5 |
N1—Mn1—N4 | 87.11 (5) | C18—C19—H19A | 120.5 |
C1—O1—Mn1 | 140.58 (11) | C19—C20—C26 | 119.83 (17) |
Mn1—O1W—H1A | 120.0 | C19—C20—H20A | 120.1 |
Mn1—O1W—H1B | 126.1 | C26—C20—H20A | 120.1 |
H1A—O1W—H1B | 105.3 | C22—C21—C26 | 121.07 (17) |
C13—N1—C17 | 117.86 (16) | C22—C21—H21A | 119.5 |
C13—N1—Mn1 | 126.61 (13) | C26—C21—H21A | 119.5 |
C17—N1—Mn1 | 114.38 (11) | C21—C22—C28 | 121.46 (16) |
C6—N2—C15 | 118.10 (15) | C21—C22—H22A | 119.3 |
C6—N2—Mn1 | 126.09 (12) | C28—C22—H22A | 119.3 |
C15—N2—Mn1 | 115.62 (11) | C24—C23—C28 | 119.77 (16) |
C25—N3—C29 | 117.81 (14) | C24—C23—H23A | 120.1 |
C25—N3—Mn1 | 125.27 (11) | C28—C23—H23A | 120.1 |
C29—N3—Mn1 | 116.76 (10) | C23—C24—C25 | 118.93 (17) |
C18—N4—C27 | 117.69 (14) | C23—C24—H24A | 120.5 |
C18—N4—Mn1 | 127.89 (11) | C25—C24—H24A | 120.5 |
C27—N4—Mn1 | 113.65 (10) | N3—C25—C24 | 123.50 (17) |
O2—C1—O1 | 122.44 (15) | N3—C25—H25A | 118.3 |
O2—C1—C2 | 118.14 (14) | C24—C25—H25A | 118.3 |
O1—C1—C2 | 119.42 (14) | C20—C26—C27 | 117.54 (16) |
C1—C2—C3 | 112.98 (13) | C20—C26—C21 | 123.32 (16) |
C1—C2—H2A | 109.0 | C27—C26—C21 | 119.14 (17) |
C3—C2—H2A | 109.0 | N4—C27—C26 | 122.33 (15) |
C1—C2—H2B | 109.0 | N4—C27—C29 | 118.19 (14) |
C3—C2—H2B | 109.0 | C26—C27—C29 | 119.49 (15) |
H2A—C2—H2B | 107.8 | C23—C28—C29 | 117.61 (16) |
C4—C3—C2 | 113.25 (14) | C23—C28—C22 | 123.34 (16) |
C4—C3—H3A | 108.9 | C29—C28—C22 | 119.05 (17) |
C2—C3—H3A | 108.9 | N3—C29—C28 | 122.27 (15) |
C4—C3—H3B | 108.9 | N3—C29—C27 | 118.00 (13) |
C2—C3—H3B | 108.9 | C28—C29—C27 | 119.72 (15) |
H3A—C3—H3B | 107.7 | C30—O4—H4C | 110.9 |
C3—C4—C5 | 113.00 (14) | O3—C30—O4 | 123.4 (2) |
C3—C4—H4A | 109.0 | O3—C30—C31 | 124.5 (2) |
C5—C4—H4A | 109.0 | O4—C30—C31 | 112.14 (19) |
C3—C4—H4B | 109.0 | C30—C31—C32 | 111.44 (18) |
C5—C4—H4B | 109.0 | C30—C31—H31A | 109.3 |
H4A—C4—H4B | 107.8 | C32—C31—H31A | 109.3 |
C5i—C5—C4 | 114.19 (18) | C30—C31—H31B | 109.3 |
C5i—C5—H5A | 108.7 | C32—C31—H31B | 109.3 |
C4—C5—H5A | 108.7 | H31A—C31—H31B | 108.0 |
C5i—C5—H5B | 108.7 | C33—C32—C31 | 112.29 (17) |
C4—C5—H5B | 108.7 | C33—C32—H32A | 109.1 |
H5A—C5—H5B | 107.6 | C31—C32—H32A | 109.1 |
N2—C6—C7 | 123.5 (2) | C33—C32—H32B | 109.1 |
N2—C6—H6A | 118.3 | C31—C32—H32B | 109.1 |
C7—C6—H6A | 118.3 | H32A—C32—H32B | 107.9 |
C8—C7—C6 | 118.9 (2) | C34—C33—C32 | 115.04 (17) |
C8—C7—H7A | 120.5 | C34—C33—H33A | 108.5 |
C6—C7—H7A | 120.5 | C32—C33—H33A | 108.5 |
C7—C8—C14 | 120.04 (18) | C34—C33—H33B | 108.5 |
C7—C8—H8A | 120.0 | C32—C33—H33B | 108.5 |
C14—C8—H8A | 120.0 | H33A—C33—H33B | 107.5 |
C10—C9—C14 | 120.9 (2) | C33—C34—C34ii | 113.5 (2) |
C10—C9—H9A | 119.6 | C33—C34—H34A | 108.9 |
C14—C9—H9A | 119.6 | C34ii—C34—H34A | 108.9 |
C9—C10—C16 | 122.0 (2) | C33—C34—H34B | 108.9 |
C9—C10—H10A | 119.0 | C34ii—C34—H34B | 108.9 |
C16—C10—H10A | 119.0 | H34A—C34—H34B | 107.7 |
C12—C11—C16 | 120.2 (2) | O5A—N5—O6B | 83.5 (3) |
C12—C11—H11A | 119.9 | O5A—N5—O7 | 140.7 (3) |
C16—C11—H11A | 119.9 | O6B—N5—O7 | 134.2 (3) |
C11—C12—C13 | 119.1 (2) | O5A—N5—O5B | 39.0 (3) |
C11—C12—H12A | 120.4 | O6B—N5—O5B | 118.1 (3) |
C13—C12—H12A | 120.4 | O7—N5—O5B | 107.6 (2) |
N1—C13—C12 | 123.0 (2) | O5A—N5—O6A | 114.4 (3) |
N1—C13—H13A | 118.5 | O6B—N5—O6A | 31.1 (2) |
C12—C13—H13A | 118.5 | O7—N5—O6A | 103.2 (3) |
C8—C14—C15 | 117.25 (19) | O5B—N5—O6A | 148.1 (3) |
C8—C14—C9 | 123.68 (19) | H2C—O2W—H2D | 105.9 |
C15—C14—C9 | 119.1 (2) | ||
O1W—Mn1—O1—C1 | −86.07 (17) | Mn1—N2—C15—C14 | −173.76 (12) |
N3—Mn1—O1—C1 | 170.90 (17) | C6—N2—C15—C17 | −178.53 (14) |
N2—Mn1—O1—C1 | 76.74 (17) | Mn1—N2—C15—C17 | 6.19 (18) |
N1—Mn1—O1—C1 | 5.20 (18) | C8—C14—C15—N2 | −1.8 (2) |
N4—Mn1—O1—C1 | −158.77 (15) | C9—C14—C15—N2 | 177.29 (16) |
O1—Mn1—N1—C13 | −97.67 (15) | C8—C14—C15—C17 | 178.28 (16) |
O1W—Mn1—N1—C13 | −9.73 (15) | C9—C14—C15—C17 | −2.7 (2) |
N3—Mn1—N1—C13 | 115.53 (16) | C12—C11—C16—C17 | 2.2 (3) |
N2—Mn1—N1—C13 | 178.56 (15) | C12—C11—C16—C10 | −177.49 (19) |
N4—Mn1—N1—C13 | 76.37 (15) | C9—C10—C16—C11 | 178.9 (2) |
O1—Mn1—N1—C17 | 94.93 (11) | C9—C10—C16—C17 | −0.8 (3) |
O1W—Mn1—N1—C17 | −177.14 (11) | C13—N1—C17—C16 | 0.0 (2) |
N3—Mn1—N1—C17 | −51.88 (17) | Mn1—N1—C17—C16 | 168.56 (13) |
N2—Mn1—N1—C17 | 11.15 (10) | C13—N1—C17—C15 | 179.16 (15) |
N4—Mn1—N1—C17 | −91.04 (11) | Mn1—N1—C17—C15 | −12.26 (17) |
O1—Mn1—N2—C6 | 61.19 (14) | C11—C16—C17—N1 | −2.2 (3) |
O1W—Mn1—N2—C6 | 146.96 (16) | C10—C16—C17—N1 | 177.46 (16) |
N3—Mn1—N2—C6 | −27.69 (14) | C11—C16—C17—C15 | 178.62 (16) |
N1—Mn1—N2—C6 | 176.08 (15) | C10—C16—C17—C15 | −1.7 (2) |
N4—Mn1—N2—C6 | −100.43 (14) | N2—C15—C17—N1 | 4.2 (2) |
O1—Mn1—N2—C15 | −123.98 (11) | C14—C15—C17—N1 | −175.80 (14) |
O1W—Mn1—N2—C15 | −38.2 (2) | N2—C15—C17—C16 | −176.55 (14) |
N3—Mn1—N2—C15 | 147.14 (11) | C14—C15—C17—C16 | 3.4 (2) |
N1—Mn1—N2—C15 | −9.09 (11) | C27—N4—C18—C19 | 1.3 (3) |
N4—Mn1—N2—C15 | 74.40 (11) | Mn1—N4—C18—C19 | −167.94 (14) |
O1—Mn1—N3—C25 | −14.49 (13) | N4—C18—C19—C20 | −0.5 (3) |
O1W—Mn1—N3—C25 | −101.30 (13) | C18—C19—C20—C26 | −1.1 (3) |
N2—Mn1—N3—C25 | 77.08 (13) | C26—C21—C22—C28 | 0.8 (3) |
N1—Mn1—N3—C25 | 135.54 (14) | C28—C23—C24—C25 | 1.8 (3) |
N4—Mn1—N3—C25 | 177.00 (14) | C29—N3—C25—C24 | 1.3 (2) |
O1—Mn1—N3—C29 | 160.80 (11) | Mn1—N3—C25—C24 | 176.52 (13) |
O1W—Mn1—N3—C29 | 73.99 (11) | C23—C24—C25—N3 | −3.2 (3) |
N2—Mn1—N3—C29 | −107.63 (11) | C19—C20—C26—C27 | 1.8 (3) |
N1—Mn1—N3—C29 | −49.17 (17) | C19—C20—C26—C21 | −178.82 (18) |
N4—Mn1—N3—C29 | −7.71 (10) | C22—C21—C26—C20 | 179.20 (18) |
O1—Mn1—N4—C18 | 146.84 (15) | C22—C21—C26—C27 | −1.4 (3) |
O1W—Mn1—N4—C18 | 73.97 (14) | C18—N4—C27—C26 | −0.5 (2) |
N3—Mn1—N4—C18 | 178.85 (15) | Mn1—N4—C27—C26 | 170.22 (12) |
N2—Mn1—N4—C18 | −90.14 (15) | C18—N4—C27—C29 | 179.24 (14) |
N1—Mn1—N4—C18 | −18.55 (14) | Mn1—N4—C27—C29 | −10.02 (17) |
O1—Mn1—N4—C27 | −22.76 (19) | C20—C26—C27—N4 | −1.0 (2) |
O1W—Mn1—N4—C27 | −95.63 (11) | C21—C26—C27—N4 | 179.60 (15) |
N3—Mn1—N4—C27 | 9.26 (10) | C20—C26—C27—C29 | 179.24 (15) |
N2—Mn1—N4—C27 | 100.26 (11) | C21—C26—C27—C29 | −0.1 (2) |
N1—Mn1—N4—C27 | 171.85 (11) | C24—C23—C28—C29 | 1.2 (3) |
Mn1—O1—C1—O2 | 165.93 (12) | C24—C23—C28—C22 | −178.06 (17) |
Mn1—O1—C1—C2 | −14.0 (2) | C21—C22—C28—C23 | −179.27 (18) |
O2—C1—C2—C3 | 50.5 (2) | C21—C22—C28—C29 | 1.5 (3) |
O1—C1—C2—C3 | −129.64 (15) | C25—N3—C29—C28 | 2.0 (2) |
C1—C2—C3—C4 | 62.81 (19) | Mn1—N3—C29—C28 | −173.70 (11) |
C2—C3—C4—C5 | 175.50 (15) | C25—N3—C29—C27 | −178.87 (14) |
C3—C4—C5—C5i | 178.9 (2) | Mn1—N3—C29—C27 | 5.47 (18) |
C15—N2—C6—C7 | −0.2 (3) | C23—C28—C29—N3 | −3.2 (2) |
Mn1—N2—C6—C7 | 174.50 (14) | C22—C28—C29—N3 | 176.11 (15) |
N2—C6—C7—C8 | −0.8 (3) | C23—C28—C29—C27 | 177.68 (14) |
C6—C7—C8—C14 | 0.4 (3) | C22—C28—C29—C27 | −3.1 (2) |
C14—C9—C10—C16 | 1.5 (3) | N4—C27—C29—N3 | 3.4 (2) |
C16—C11—C12—C13 | 0.0 (3) | C26—C27—C29—N3 | −176.81 (14) |
C17—N1—C13—C12 | 2.4 (3) | N4—C27—C29—C28 | −177.37 (14) |
Mn1—N1—C13—C12 | −164.64 (14) | C26—C27—C29—C28 | 2.4 (2) |
C11—C12—C13—N1 | −2.4 (3) | O3—C30—C31—C32 | −119.2 (2) |
C7—C8—C14—C15 | 0.7 (3) | O4—C30—C31—C32 | 59.2 (2) |
C7—C8—C14—C9 | −178.27 (19) | C30—C31—C32—C33 | 65.7 (2) |
C10—C9—C14—C8 | 179.2 (2) | C31—C32—C33—C34 | −169.68 (17) |
C10—C9—C14—C15 | 0.2 (3) | C32—C33—C34—C34ii | 179.1 (2) |
C6—N2—C15—C14 | 1.5 (2) |
Symmetry codes: (i) −x+1, −y, −z; (ii) −x, −y+1, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1A···O2iii | 0.85 | 1.83 | 2.6680 (16) | 170 |
O2W—H2D···O6Aiv | 0.85 | 2.24 | 2.991 (6) | 148 |
O2W—H2D···O7iv | 0.85 | 2.22 | 3.020 (2) | 157 |
O1W—H1B···O6B | 0.89 | 1.87 | 2.710 (4) | 156 |
O1W—H1B···O5A | 0.89 | 1.99 | 2.830 (5) | 156 |
O2W—H2C···O2 | 0.85 | 1.90 | 2.7396 (19) | 170 |
O4—H4C···O2W | 0.85 | 1.78 | 2.622 (2) | 172 |
Symmetry codes: (iii) −x+1, −y, −z+1; (iv) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | [Mn2(C10H16O4)(C12H8N2)4(H2O)2](NO3)2·C10H18O4·2H2O |
Mr | 1429.00 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 11.6712 (3), 12.5316 (3), 12.8561 (3) |
α, β, γ (°) | 76.678 (1), 66.845 (1), 81.971 (1) |
V (Å3) | 1679.79 (7) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.46 |
Crystal size (mm) | 0.58 × 0.33 × 0.13 |
Data collection | |
Diffractometer | Bruker APEXII |
Absorption correction | Multi-scan (SADABS; Bruker, 2002) |
Tmin, Tmax | 0.837, 0.943 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 25302, 7666, 6144 |
Rint | 0.025 |
(sin θ/λ)max (Å−1) | 0.652 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.036, 0.085, 1.03 |
No. of reflections | 7666 |
No. of parameters | 449 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.50, −0.38 |
Computer programs: APEX2 (Bruker, 2006), SAINT (Bruker, 2006), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1A···O2i | 0.85 | 1.83 | 2.6680 (16) | 169.8 |
O2W—H2D···O6Aii | 0.85 | 2.24 | 2.991 (6) | 147.5 |
O2W—H2D···O7ii | 0.85 | 2.22 | 3.020 (2) | 156.9 |
O1W—H1B···O6B | 0.89 | 1.87 | 2.710 (4) | 156.0 |
O1W—H1B···O5A | 0.89 | 1.99 | 2.830 (5) | 155.9 |
O2W—H2C···O2 | 0.85 | 1.90 | 2.7396 (19) | 170.3 |
O4—H4C···O2W | 0.85 | 1.78 | 2.622 (2) | 171.8 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) x−1, y, z. |
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The design and synthesis of carboxylic metal-organic complexes have been an increasing interest for many years owing to their potential practical applications, such as fluorescence, magnetism (Wang, et al., 2010; Fang, et al., 2006; Lehn, et al., 2007). Interested in this field, herein, we report the crystal structure of a new manganeseII complex with the sebacic acid ligand. The asymmetric unit contains a centrosymmetric dinuclear complex cation, one water molecule, a free sebacic acid and one nitrato anion. The Mn atoms are each octahedrally surrounded by four N atoms from two phen ligands, one O atom from one carbonyl group of the bridging sebacato ligand and one O atom of water molecule. The basal Mn—O and Mn—N bond lengths fall in the range 2.0934 (11)–2.1466 (11); 2.2821 (13)–2.3480 (13)Å respectively. The axial Mn—N bond lengths fall in the range 2.2596 (13)–2.3027 (14) Å. The sebasic acid molecule is linear and all C—C and C—O bond lengths are of normal values. The sebacate anion acts as monodentate ligand . The crystal structures is stabilized by three and four intermolecular and intramolecular O—H···O hydrogen bonds respectively, Fig.1. The phen ligands make a dihedral angle of 77.4 (3)°.