organic compounds
5-[(E)-2-Fluorobenzylidene]-8-(2-fluorophenyl)-2-hydroxy-10-methyl-3,10-diazahexacyclo[10.7.1.13,7.02,11.07,11.016,20]henicosa-1(20),12,14,16,18-pentaen-6-one
aSchool of Chemical Sciences, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
In the title compound, C33H26F2N2O2, the piperidone ring adopts a half-chair conformation and the pyrrolidine rings adopt half-chair and envelope conformations. The two benzene rings make dihedral angles of 29.58 (5) and 76.33 (5)° with the mean plane of the 1,2-dihydroacenaphthylene unit. An intramolecular O—H⋯N hydrogen bond helps to stabilize the molecular structure. In the crystal, intermolecular C—H⋯F hydrogen bonds link the molecules into [010] chains. Weak C—H⋯π interactions are also observed.
Related literature
For general background to and the biological activity of ); Grigg & Sridharan (1993); Daly et al. (1986); Waldmann (1995). For the synthesis, see: Kumar et al. (2010). For ring conformations, see Cremer & Pople (1975). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
see: Tsuge & Kanemasa (1989Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
https://doi.org/10.1107/S1600536810052815/hb5771sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810052815/hb5771Isup2.hkl
The title compound was synthesized according to the previous procedure described by us (Kumar et al., 2010) and was recrystallized from ethyl acetate to afford pale yellow plates.
The O bound hydrogen atom was located from the difference Fourier map and was refined freely. The rest of hydrogen atoms were positioned geometrically [C–H = 0.93–0.97 Å] and refined using a riding model, with Uiso(H) = 1.2 or 1.5Ueq(C). A rotating-group model was applied for methyl group.
Due to their varying biological activities,
with fused five- and six-membered rings occupy an important place among organic compounds. 1,3-Dipolar cycloadditions are efficient methods for the construction of heterocyclic rings (Tsuge & Kanemasa, 1989; Grigg & Sridharan, 1993). In particular, the chemistry of gained significance as it serves as a facile route for the construction of nitrogen-containing five-membered heterocycles which constitute the central skeleton of numerous natural products (Daly et al., 1986; Waldmann, 1995). Taking into account the importance of aforesaid heterocycles, we have undertaken the X-ray diffraction study of the title compound and the results are presented here.The molecular structure of the title compound is shown in Fig. 1. The 4-piperidone ring (C8—C9/N1/C10—C12) adopts a half-chair conformation, with puckering parameters Q = 0.6127 (11) Å, θ = 142.74 (10)° and φ = 119.46 (17)° (Cremer & Pople, 1975). The two fused pyrrolidine rings with atom sequences N1/C10/C11/C24/C13 and N2/C24/C11/C26/C25, adopt a half-chair (twist on N1–C10) and an envelope (flap on atom N2) conformations, respectively. The puckering parameters are Q = 0.4498 (11) Å, φ = 206.94 (14)° for the N1/C10/C11/C24/C13 pyrrolidine ring and Q = 0.4187 (11) Å, φ = 359.86 (16)° for the N2/C24/C11/C26/C25 pyrrolidine ring. The two benzene rings (C1–C6 and C27–C32) make dihedral angles of 29.58 (5) and 76.33 (5)°, respectively with the mean plane of 1,2-dihydroacenaphthylene (C13–C24). The geometric parameters are consistent to those observed in a closely related structure (Kumar et al., 2010). An intramolecular O2—H1O2···N2 hydrogen bond stabilize the molecular structure.
In the π interactions (Table 1) are also observed.
intermolecular C10—H10A···F1 and C20—H30A···F2 hydrogen bonds (Table 1) link the molecules into chains propagating along the [010] direction (Fig. 2). Weak intermolecular C—H···For general background to and the biological activity of
see: Tsuge & Kanemasa (1989); Grigg & Sridharan (1993); Daly et al. (1986); Waldmann (1995). For the synthesis, see: Kumar et al. (2010). For ring conformations, see Cremer & Pople (1975). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of the title compound with 50% probability ellipsoids for non-H atoms. | |
Fig. 2. The crystal packing of title compound, viewed down the c axis, showing the molecules linked into chains along the b axis. Intermolecular hydrogen bonds are shown as dashed lines. |
C33H26F2N2O2 | F(000) = 1088 |
Mr = 520.56 | Dx = 1.385 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 7762 reflections |
a = 16.664 (2) Å | θ = 2.8–33.8° |
b = 9.7226 (11) Å | µ = 0.10 mm−1 |
c = 15.507 (2) Å | T = 100 K |
β = 96.447 (2)° | Plate, yellow |
V = 2496.5 (5) Å3 | 0.49 × 0.32 × 0.13 mm |
Z = 4 |
Bruker APEXII DUO CCD diffractometer | 10068 independent reflections |
Radiation source: fine-focus sealed tube | 7622 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.040 |
φ and ω scans | θmax = 34.0°, θmin = 2.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −25→26 |
Tmin = 0.955, Tmax = 0.988 | k = −15→15 |
31956 measured reflections | l = −24→22 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.052 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.181 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | w = 1/[σ2(Fo2) + (0.1093P)2 + 0.1256P] where P = (Fo2 + 2Fc2)/3 |
10068 reflections | (Δ/σ)max < 0.001 |
357 parameters | Δρmax = 0.50 e Å−3 |
0 restraints | Δρmin = −0.34 e Å−3 |
C33H26F2N2O2 | V = 2496.5 (5) Å3 |
Mr = 520.56 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 16.664 (2) Å | µ = 0.10 mm−1 |
b = 9.7226 (11) Å | T = 100 K |
c = 15.507 (2) Å | 0.49 × 0.32 × 0.13 mm |
β = 96.447 (2)° |
Bruker APEXII DUO CCD diffractometer | 10068 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 7622 reflections with I > 2σ(I) |
Tmin = 0.955, Tmax = 0.988 | Rint = 0.040 |
31956 measured reflections |
R[F2 > 2σ(F2)] = 0.052 | 0 restraints |
wR(F2) = 0.181 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | Δρmax = 0.50 e Å−3 |
10068 reflections | Δρmin = −0.34 e Å−3 |
357 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
F1 | 0.22287 (5) | −0.09340 (8) | −0.08747 (6) | 0.03048 (18) | |
F2 | 0.45096 (6) | 0.58239 (9) | −0.20151 (6) | 0.0358 (2) | |
O1 | 0.39107 (5) | 0.30091 (10) | −0.12913 (7) | 0.02658 (19) | |
O2 | 0.15163 (5) | 0.61493 (9) | 0.00816 (6) | 0.02169 (17) | |
N1 | 0.17809 (5) | 0.51233 (9) | −0.12231 (6) | 0.01635 (17) | |
N2 | 0.30632 (5) | 0.56856 (10) | 0.06815 (6) | 0.01923 (18) | |
C1 | 0.16676 (7) | −0.05834 (12) | −0.15376 (8) | 0.0215 (2) | |
C2 | 0.10676 (7) | −0.15156 (13) | −0.17951 (10) | 0.0271 (2) | |
H2A | 0.1053 | −0.2373 | −0.1532 | 0.033* | |
C3 | 0.04838 (8) | −0.11319 (14) | −0.24619 (10) | 0.0304 (3) | |
H3A | 0.0073 | −0.1744 | −0.2653 | 0.037* | |
C4 | 0.05071 (8) | 0.01535 (14) | −0.28457 (9) | 0.0268 (2) | |
H4A | 0.0102 | 0.0412 | −0.3277 | 0.032* | |
C5 | 0.11349 (7) | 0.10543 (12) | −0.25857 (8) | 0.0211 (2) | |
H5A | 0.1156 | 0.1903 | −0.2859 | 0.025* | |
C6 | 0.17377 (7) | 0.07036 (11) | −0.19167 (7) | 0.0185 (2) | |
C7 | 0.24461 (7) | 0.15535 (12) | −0.16437 (8) | 0.0194 (2) | |
H7A | 0.2930 | 0.1089 | −0.1499 | 0.023* | |
C8 | 0.24723 (6) | 0.29276 (11) | −0.15795 (7) | 0.01732 (19) | |
C9 | 0.17378 (6) | 0.38537 (11) | −0.17402 (7) | 0.01779 (19) | |
H9A | 0.1664 | 0.4099 | −0.2350 | 0.021* | |
H9B | 0.1265 | 0.3338 | −0.1617 | 0.021* | |
C10 | 0.25581 (6) | 0.57891 (11) | −0.13048 (7) | 0.01756 (19) | |
H10A | 0.2561 | 0.6728 | −0.1093 | 0.021* | |
H10B | 0.2673 | 0.5795 | −0.1904 | 0.021* | |
C11 | 0.31781 (6) | 0.48950 (11) | −0.07365 (7) | 0.01573 (18) | |
C12 | 0.32628 (6) | 0.35540 (11) | −0.12233 (7) | 0.01816 (19) | |
C13 | 0.17937 (6) | 0.49274 (11) | −0.02730 (7) | 0.01591 (18) | |
C14 | 0.13397 (6) | 0.36810 (11) | −0.00054 (7) | 0.01704 (19) | |
C15 | 0.05339 (6) | 0.33647 (12) | −0.00943 (8) | 0.0209 (2) | |
H15A | 0.0154 | 0.3981 | −0.0354 | 0.025* | |
C16 | 0.02922 (7) | 0.20736 (13) | 0.02195 (9) | 0.0252 (2) | |
H16A | −0.0255 | 0.1863 | 0.0174 | 0.030* | |
C17 | 0.08376 (8) | 0.11258 (13) | 0.05878 (9) | 0.0253 (2) | |
H17A | 0.0657 | 0.0289 | 0.0782 | 0.030* | |
C18 | 0.16772 (7) | 0.14199 (12) | 0.06725 (8) | 0.0209 (2) | |
C19 | 0.23165 (8) | 0.05522 (13) | 0.10249 (8) | 0.0255 (2) | |
H19A | 0.2201 | −0.0317 | 0.1228 | 0.031* | |
C20 | 0.30997 (8) | 0.09849 (13) | 0.10674 (9) | 0.0266 (2) | |
H20A | 0.3508 | 0.0400 | 0.1305 | 0.032* | |
C21 | 0.33118 (7) | 0.22989 (13) | 0.07610 (8) | 0.0237 (2) | |
H21A | 0.3850 | 0.2563 | 0.0788 | 0.028* | |
C22 | 0.27098 (6) | 0.31696 (12) | 0.04254 (7) | 0.01815 (19) | |
C23 | 0.19010 (6) | 0.27189 (11) | 0.03808 (7) | 0.01777 (19) | |
C24 | 0.27181 (6) | 0.46278 (11) | 0.00720 (7) | 0.01602 (18) | |
C25 | 0.39317 (6) | 0.56622 (13) | 0.06012 (7) | 0.0211 (2) | |
H25A | 0.4186 | 0.4866 | 0.0894 | 0.025* | |
H25B | 0.4192 | 0.6488 | 0.0847 | 0.025* | |
C26 | 0.39858 (6) | 0.55880 (11) | −0.03787 (7) | 0.01791 (19) | |
H26A | 0.4428 | 0.4965 | −0.0478 | 0.021* | |
C27 | 0.41441 (6) | 0.69660 (12) | −0.07821 (7) | 0.01820 (19) | |
C28 | 0.40392 (7) | 0.82279 (13) | −0.03838 (8) | 0.0238 (2) | |
H28A | 0.3833 | 0.8246 | 0.0149 | 0.029* | |
C29 | 0.42350 (8) | 0.94592 (14) | −0.07619 (10) | 0.0278 (3) | |
H29A | 0.4157 | 1.0286 | −0.0482 | 0.033* | |
C30 | 0.45462 (7) | 0.94638 (15) | −0.15531 (10) | 0.0296 (3) | |
H30A | 0.4684 | 1.0291 | −0.1799 | 0.036* | |
C31 | 0.46512 (8) | 0.82381 (15) | −0.19762 (9) | 0.0294 (3) | |
H31A | 0.4863 | 0.8222 | −0.2506 | 0.035* | |
C32 | 0.44319 (7) | 0.70319 (13) | −0.15875 (8) | 0.0231 (2) | |
C33 | 0.28877 (8) | 0.55308 (15) | 0.15801 (8) | 0.0275 (3) | |
H33A | 0.3097 | 0.6309 | 0.1914 | 0.041* | |
H33B | 0.3137 | 0.4705 | 0.1821 | 0.041* | |
H33C | 0.2314 | 0.5477 | 0.1594 | 0.041* | |
H1O2 | 0.1965 (16) | 0.658 (3) | 0.0285 (17) | 0.073 (8)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1 | 0.0295 (4) | 0.0244 (4) | 0.0345 (4) | 0.0015 (3) | −0.0100 (3) | 0.0043 (3) |
F2 | 0.0468 (5) | 0.0372 (5) | 0.0248 (4) | 0.0078 (4) | 0.0106 (4) | −0.0036 (3) |
O1 | 0.0161 (3) | 0.0257 (4) | 0.0385 (5) | 0.0032 (3) | 0.0052 (3) | −0.0037 (4) |
O2 | 0.0172 (3) | 0.0197 (4) | 0.0282 (4) | 0.0009 (3) | 0.0027 (3) | −0.0074 (3) |
N1 | 0.0141 (4) | 0.0168 (4) | 0.0177 (4) | −0.0003 (3) | −0.0001 (3) | −0.0007 (3) |
N2 | 0.0157 (4) | 0.0266 (5) | 0.0151 (4) | −0.0052 (3) | 0.0007 (3) | −0.0020 (3) |
C1 | 0.0195 (5) | 0.0209 (5) | 0.0236 (5) | 0.0016 (4) | 0.0003 (4) | 0.0011 (4) |
C2 | 0.0230 (5) | 0.0229 (5) | 0.0349 (6) | −0.0030 (4) | 0.0009 (5) | 0.0042 (5) |
C3 | 0.0230 (5) | 0.0280 (6) | 0.0387 (7) | −0.0069 (4) | −0.0039 (5) | 0.0018 (5) |
C4 | 0.0242 (5) | 0.0264 (6) | 0.0280 (6) | −0.0010 (4) | −0.0049 (5) | −0.0002 (5) |
C5 | 0.0237 (5) | 0.0203 (5) | 0.0188 (5) | 0.0000 (4) | −0.0001 (4) | −0.0005 (4) |
C6 | 0.0186 (4) | 0.0185 (4) | 0.0187 (5) | 0.0006 (3) | 0.0029 (4) | −0.0022 (4) |
C7 | 0.0177 (4) | 0.0198 (5) | 0.0208 (5) | 0.0012 (4) | 0.0024 (4) | −0.0020 (4) |
C8 | 0.0152 (4) | 0.0202 (5) | 0.0166 (4) | 0.0011 (3) | 0.0018 (3) | −0.0015 (4) |
C9 | 0.0160 (4) | 0.0192 (4) | 0.0174 (4) | 0.0003 (3) | −0.0015 (3) | −0.0020 (4) |
C10 | 0.0142 (4) | 0.0186 (4) | 0.0195 (5) | −0.0003 (3) | 0.0000 (3) | 0.0024 (4) |
C11 | 0.0121 (4) | 0.0184 (4) | 0.0165 (4) | −0.0005 (3) | 0.0010 (3) | 0.0014 (4) |
C12 | 0.0147 (4) | 0.0203 (5) | 0.0196 (5) | 0.0007 (3) | 0.0025 (3) | 0.0013 (4) |
C13 | 0.0125 (4) | 0.0170 (4) | 0.0182 (4) | 0.0008 (3) | 0.0018 (3) | −0.0022 (4) |
C14 | 0.0139 (4) | 0.0195 (4) | 0.0179 (4) | −0.0017 (3) | 0.0025 (3) | −0.0032 (4) |
C15 | 0.0148 (4) | 0.0234 (5) | 0.0248 (5) | −0.0025 (4) | 0.0034 (4) | −0.0051 (4) |
C16 | 0.0191 (5) | 0.0277 (6) | 0.0295 (6) | −0.0079 (4) | 0.0057 (4) | −0.0056 (5) |
C17 | 0.0255 (5) | 0.0233 (5) | 0.0279 (6) | −0.0082 (4) | 0.0065 (4) | −0.0026 (5) |
C18 | 0.0235 (5) | 0.0200 (5) | 0.0197 (5) | −0.0035 (4) | 0.0050 (4) | −0.0020 (4) |
C19 | 0.0329 (6) | 0.0209 (5) | 0.0230 (5) | −0.0004 (4) | 0.0042 (5) | 0.0031 (4) |
C20 | 0.0276 (6) | 0.0252 (5) | 0.0263 (6) | 0.0047 (4) | −0.0002 (5) | 0.0068 (5) |
C21 | 0.0185 (5) | 0.0276 (6) | 0.0246 (5) | 0.0020 (4) | 0.0000 (4) | 0.0056 (5) |
C22 | 0.0153 (4) | 0.0218 (5) | 0.0173 (4) | −0.0001 (3) | 0.0014 (3) | 0.0016 (4) |
C23 | 0.0163 (4) | 0.0205 (5) | 0.0168 (4) | −0.0012 (3) | 0.0033 (3) | −0.0009 (4) |
C24 | 0.0120 (4) | 0.0203 (4) | 0.0156 (4) | −0.0013 (3) | 0.0009 (3) | 0.0003 (4) |
C25 | 0.0145 (4) | 0.0301 (5) | 0.0181 (5) | −0.0052 (4) | −0.0013 (4) | 0.0030 (4) |
C26 | 0.0127 (4) | 0.0218 (5) | 0.0190 (5) | −0.0014 (3) | 0.0007 (3) | 0.0014 (4) |
C27 | 0.0118 (4) | 0.0239 (5) | 0.0188 (5) | −0.0031 (3) | 0.0011 (3) | 0.0011 (4) |
C28 | 0.0221 (5) | 0.0257 (5) | 0.0237 (5) | −0.0047 (4) | 0.0036 (4) | −0.0003 (4) |
C29 | 0.0235 (5) | 0.0241 (5) | 0.0347 (7) | −0.0054 (4) | −0.0025 (5) | 0.0027 (5) |
C30 | 0.0213 (5) | 0.0328 (6) | 0.0335 (7) | −0.0050 (4) | −0.0020 (5) | 0.0127 (5) |
C31 | 0.0229 (5) | 0.0418 (7) | 0.0237 (5) | −0.0011 (5) | 0.0038 (4) | 0.0117 (5) |
C32 | 0.0191 (5) | 0.0311 (6) | 0.0189 (5) | 0.0015 (4) | 0.0017 (4) | 0.0015 (4) |
C33 | 0.0254 (5) | 0.0406 (7) | 0.0168 (5) | −0.0087 (5) | 0.0034 (4) | −0.0035 (5) |
F1—C1 | 1.3533 (14) | C14—C15 | 1.3694 (14) |
F2—C32 | 1.3620 (15) | C14—C23 | 1.4081 (15) |
O1—C12 | 1.2177 (13) | C15—C16 | 1.4209 (17) |
O2—C13 | 1.4088 (13) | C15—H15A | 0.9300 |
O2—H1O2 | 0.89 (3) | C16—C17 | 1.3730 (19) |
N1—C10 | 1.4660 (13) | C16—H16A | 0.9300 |
N1—C9 | 1.4694 (14) | C17—C18 | 1.4196 (16) |
N1—C13 | 1.4833 (14) | C17—H17A | 0.9300 |
N2—C33 | 1.4633 (16) | C18—C23 | 1.4059 (16) |
N2—C25 | 1.4668 (14) | C18—C19 | 1.4193 (17) |
N2—C24 | 1.4696 (14) | C19—C20 | 1.3658 (18) |
C1—C2 | 1.3751 (17) | C19—H19A | 0.9300 |
C1—C6 | 1.3930 (16) | C20—C21 | 1.4214 (18) |
C2—C3 | 1.3887 (19) | C20—H20A | 0.9300 |
C2—H2A | 0.9300 | C21—C22 | 1.3699 (15) |
C3—C4 | 1.3866 (19) | C21—H21A | 0.9300 |
C3—H3A | 0.9300 | C22—C23 | 1.4117 (14) |
C4—C5 | 1.3890 (17) | C22—C24 | 1.5206 (15) |
C4—H4A | 0.9300 | C25—C26 | 1.5338 (16) |
C5—C6 | 1.4027 (16) | C25—H25A | 0.9700 |
C5—H5A | 0.9300 | C25—H25B | 0.9700 |
C6—C7 | 1.4640 (15) | C26—C27 | 1.5143 (15) |
C7—C8 | 1.3400 (15) | C26—H26A | 0.9800 |
C7—H7A | 0.9300 | C27—C32 | 1.3887 (16) |
C8—C12 | 1.4994 (15) | C27—C28 | 1.3933 (17) |
C8—C9 | 1.5174 (15) | C28—C29 | 1.3880 (17) |
C9—H9A | 0.9700 | C28—H28A | 0.9300 |
C9—H9B | 0.9700 | C29—C30 | 1.385 (2) |
C10—C11 | 1.5477 (14) | C29—H29A | 0.9300 |
C10—H10A | 0.9700 | C30—C31 | 1.381 (2) |
C10—H10B | 0.9700 | C30—H30A | 0.9300 |
C11—C12 | 1.5210 (15) | C31—C32 | 1.3863 (18) |
C11—C26 | 1.5510 (14) | C31—H31A | 0.9300 |
C11—C24 | 1.5628 (15) | C33—H33A | 0.9600 |
C13—C14 | 1.5110 (15) | C33—H33B | 0.9600 |
C13—C24 | 1.5998 (14) | C33—H33C | 0.9600 |
C13—O2—H1O2 | 103.9 (17) | C17—C16—H16A | 118.8 |
C10—N1—C9 | 108.26 (8) | C15—C16—H16A | 118.8 |
C10—N1—C13 | 103.19 (8) | C16—C17—C18 | 120.19 (11) |
C9—N1—C13 | 115.37 (8) | C16—C17—H17A | 119.9 |
C33—N2—C25 | 112.58 (9) | C18—C17—H17A | 119.9 |
C33—N2—C24 | 115.78 (9) | C23—C18—C19 | 116.30 (10) |
C25—N2—C24 | 104.66 (9) | C23—C18—C17 | 116.45 (11) |
F1—C1—C2 | 118.19 (11) | C19—C18—C17 | 127.24 (11) |
F1—C1—C6 | 117.60 (10) | C20—C19—C18 | 120.49 (11) |
C2—C1—C6 | 124.20 (11) | C20—C19—H19A | 119.8 |
C1—C2—C3 | 117.70 (12) | C18—C19—H19A | 119.8 |
C1—C2—H2A | 121.1 | C19—C20—C21 | 122.19 (11) |
C3—C2—H2A | 121.1 | C19—C20—H20A | 118.9 |
C4—C3—C2 | 120.70 (12) | C21—C20—H20A | 118.9 |
C4—C3—H3A | 119.6 | C22—C21—C20 | 118.92 (11) |
C2—C3—H3A | 119.6 | C22—C21—H21A | 120.5 |
C3—C4—C5 | 120.01 (11) | C20—C21—H21A | 120.5 |
C3—C4—H4A | 120.0 | C21—C22—C23 | 118.76 (11) |
C5—C4—H4A | 120.0 | C21—C22—C24 | 132.63 (10) |
C4—C5—C6 | 120.99 (11) | C23—C22—C24 | 108.61 (9) |
C4—C5—H5A | 119.5 | C18—C23—C14 | 123.11 (10) |
C6—C5—H5A | 119.5 | C18—C23—C22 | 123.33 (10) |
C1—C6—C5 | 116.33 (10) | C14—C23—C22 | 113.55 (10) |
C1—C6—C7 | 119.21 (10) | N2—C24—C22 | 116.07 (9) |
C5—C6—C7 | 124.33 (10) | N2—C24—C11 | 102.00 (8) |
C8—C7—C6 | 127.06 (10) | C22—C24—C11 | 117.98 (9) |
C8—C7—H7A | 116.5 | N2—C24—C13 | 112.35 (9) |
C6—C7—H7A | 116.5 | C22—C24—C13 | 104.06 (8) |
C7—C8—C12 | 116.89 (9) | C11—C24—C13 | 104.01 (8) |
C7—C8—C9 | 124.09 (10) | N2—C25—C26 | 104.66 (8) |
C12—C8—C9 | 118.60 (9) | N2—C25—H25A | 110.8 |
N1—C9—C8 | 114.82 (8) | C26—C25—H25A | 110.8 |
N1—C9—H9A | 108.6 | N2—C25—H25B | 110.8 |
C8—C9—H9A | 108.6 | C26—C25—H25B | 110.8 |
N1—C9—H9B | 108.6 | H25A—C25—H25B | 108.9 |
C8—C9—H9B | 108.6 | C27—C26—C25 | 113.57 (9) |
H9A—C9—H9B | 107.5 | C27—C26—C11 | 114.90 (9) |
N1—C10—C11 | 104.03 (8) | C25—C26—C11 | 103.28 (8) |
N1—C10—H10A | 110.9 | C27—C26—H26A | 108.3 |
C11—C10—H10A | 110.9 | C25—C26—H26A | 108.3 |
N1—C10—H10B | 110.9 | C11—C26—H26A | 108.3 |
C11—C10—H10B | 110.9 | C32—C27—C28 | 115.55 (10) |
H10A—C10—H10B | 109.0 | C32—C27—C26 | 120.40 (10) |
C12—C11—C10 | 106.98 (8) | C28—C27—C26 | 124.03 (10) |
C12—C11—C26 | 115.13 (8) | C29—C28—C27 | 121.67 (12) |
C10—C11—C26 | 117.17 (9) | C29—C28—H28A | 119.2 |
C12—C11—C24 | 109.69 (8) | C27—C28—H28A | 119.2 |
C10—C11—C24 | 101.18 (8) | C30—C29—C28 | 120.42 (13) |
C26—C11—C24 | 105.62 (8) | C30—C29—H29A | 119.8 |
O1—C12—C8 | 122.83 (10) | C28—C29—H29A | 119.8 |
O1—C12—C11 | 123.26 (10) | C31—C30—C29 | 119.89 (12) |
C8—C12—C11 | 113.85 (8) | C31—C30—H30A | 120.1 |
O2—C13—N1 | 108.10 (8) | C29—C30—H30A | 120.1 |
O2—C13—C14 | 111.89 (9) | C30—C31—C32 | 118.01 (12) |
N1—C13—C14 | 115.09 (9) | C30—C31—H31A | 121.0 |
O2—C13—C24 | 111.65 (8) | C32—C31—H31A | 121.0 |
N1—C13—C24 | 105.15 (8) | F2—C32—C31 | 118.27 (11) |
C14—C13—C24 | 104.78 (8) | F2—C32—C27 | 117.35 (11) |
C15—C14—C23 | 119.38 (10) | C31—C32—C27 | 124.38 (12) |
C15—C14—C13 | 131.91 (10) | N2—C33—H33A | 109.5 |
C23—C14—C13 | 108.69 (9) | N2—C33—H33B | 109.5 |
C14—C15—C16 | 118.46 (11) | H33A—C33—H33B | 109.5 |
C14—C15—H15A | 120.8 | N2—C33—H33C | 109.5 |
C16—C15—H15A | 120.8 | H33A—C33—H33C | 109.5 |
C17—C16—C15 | 122.38 (11) | H33B—C33—H33C | 109.5 |
F1—C1—C2—C3 | 178.47 (12) | C13—C14—C23—C18 | −177.52 (10) |
C6—C1—C2—C3 | −1.7 (2) | C15—C14—C23—C22 | 179.49 (10) |
C1—C2—C3—C4 | −0.5 (2) | C13—C14—C23—C22 | 0.90 (13) |
C2—C3—C4—C5 | 2.3 (2) | C21—C22—C23—C18 | 0.68 (17) |
C3—C4—C5—C6 | −2.1 (2) | C24—C22—C23—C18 | −178.72 (10) |
F1—C1—C6—C5 | −178.26 (10) | C21—C22—C23—C14 | −177.73 (11) |
C2—C1—C6—C5 | 1.88 (18) | C24—C22—C23—C14 | 2.88 (13) |
F1—C1—C6—C7 | 5.77 (16) | C33—N2—C24—C22 | −37.58 (13) |
C2—C1—C6—C7 | −174.09 (12) | C25—N2—C24—C22 | 86.96 (10) |
C4—C5—C6—C1 | 0.05 (17) | C33—N2—C24—C11 | −167.22 (9) |
C4—C5—C6—C7 | 175.79 (11) | C25—N2—C24—C11 | −42.68 (10) |
C1—C6—C7—C8 | −145.45 (13) | C33—N2—C24—C13 | 81.99 (12) |
C5—C6—C7—C8 | 38.93 (18) | C25—N2—C24—C13 | −153.47 (9) |
C6—C7—C8—C12 | 175.81 (11) | C21—C22—C24—N2 | −60.40 (17) |
C6—C7—C8—C9 | 3.43 (19) | C23—C22—C24—N2 | 118.87 (10) |
C10—N1—C9—C8 | 49.53 (12) | C21—C22—C24—C11 | 61.06 (17) |
C13—N1—C9—C8 | −65.47 (12) | C23—C22—C24—C11 | −119.66 (10) |
C7—C8—C9—N1 | 148.66 (11) | C21—C22—C24—C13 | 175.62 (13) |
C12—C8—C9—N1 | −23.59 (14) | C23—C22—C24—C13 | −5.10 (11) |
C9—N1—C10—C11 | −74.36 (10) | C12—C11—C24—N2 | 150.00 (8) |
C13—N1—C10—C11 | 48.39 (10) | C10—C11—C24—N2 | −97.23 (9) |
N1—C10—C11—C12 | 72.81 (10) | C26—C11—C24—N2 | 25.36 (10) |
N1—C10—C11—C26 | −156.20 (9) | C12—C11—C24—C22 | 21.57 (12) |
N1—C10—C11—C24 | −41.99 (10) | C10—C11—C24—C22 | 134.33 (9) |
C7—C8—C12—O1 | 27.68 (17) | C26—C11—C24—C22 | −103.08 (10) |
C9—C8—C12—O1 | −159.51 (11) | C12—C11—C24—C13 | −93.02 (9) |
C7—C8—C12—C11 | −149.72 (10) | C10—C11—C24—C13 | 19.75 (10) |
C9—C8—C12—C11 | 23.09 (14) | C26—C11—C24—C13 | 142.34 (8) |
C10—C11—C12—O1 | 136.13 (11) | O2—C13—C24—N2 | 0.39 (12) |
C26—C11—C12—O1 | 4.01 (16) | N1—C13—C24—N2 | 117.38 (9) |
C24—C11—C12—O1 | −114.92 (12) | C14—C13—C24—N2 | −120.91 (9) |
C10—C11—C12—C8 | −46.47 (11) | O2—C13—C24—C22 | 126.74 (9) |
C26—C11—C12—C8 | −178.59 (9) | N1—C13—C24—C22 | −116.27 (9) |
C24—C11—C12—C8 | 62.47 (11) | C14—C13—C24—C22 | 5.44 (10) |
C10—N1—C13—O2 | 85.18 (9) | O2—C13—C24—C11 | −109.14 (9) |
C9—N1—C13—O2 | −156.95 (8) | N1—C13—C24—C11 | 7.85 (10) |
C10—N1—C13—C14 | −148.94 (9) | C14—C13—C24—C11 | 129.56 (9) |
C9—N1—C13—C14 | −31.08 (12) | C33—N2—C25—C26 | 170.68 (10) |
C10—N1—C13—C24 | −34.20 (10) | C24—N2—C25—C26 | 44.13 (11) |
C9—N1—C13—C24 | 83.67 (10) | N2—C25—C26—C27 | 99.05 (10) |
O2—C13—C14—C15 | 56.48 (16) | N2—C25—C26—C11 | −26.05 (11) |
N1—C13—C14—C15 | −67.42 (15) | C12—C11—C26—C27 | 114.79 (10) |
C24—C13—C14—C15 | 177.62 (12) | C10—C11—C26—C27 | −12.32 (13) |
O2—C13—C14—C23 | −125.16 (10) | C24—C11—C26—C27 | −124.03 (10) |
N1—C13—C14—C23 | 110.94 (10) | C12—C11—C26—C25 | −120.97 (10) |
C24—C13—C14—C23 | −4.02 (11) | C10—C11—C26—C25 | 111.91 (10) |
C23—C14—C15—C16 | 0.81 (17) | C24—C11—C26—C25 | 0.20 (11) |
C13—C14—C15—C16 | 179.03 (11) | C25—C26—C27—C32 | 161.80 (10) |
C14—C15—C16—C17 | −1.58 (19) | C11—C26—C27—C32 | −79.59 (13) |
C15—C16—C17—C18 | 0.4 (2) | C25—C26—C27—C28 | −16.44 (14) |
C16—C17—C18—C23 | 1.38 (18) | C11—C26—C27—C28 | 102.17 (12) |
C16—C17—C18—C19 | −179.11 (12) | C32—C27—C28—C29 | −1.88 (17) |
C23—C18—C19—C20 | −0.13 (18) | C26—C27—C28—C29 | 176.44 (11) |
C17—C18—C19—C20 | −179.64 (13) | C27—C28—C29—C30 | −0.24 (19) |
C18—C19—C20—C21 | −0.4 (2) | C28—C29—C30—C31 | 1.01 (19) |
C19—C20—C21—C22 | 1.1 (2) | C29—C30—C31—C32 | 0.43 (18) |
C20—C21—C22—C23 | −1.20 (18) | C30—C31—C32—F2 | 177.91 (11) |
C20—C21—C22—C24 | 178.01 (12) | C30—C31—C32—C27 | −2.81 (19) |
C19—C18—C23—C14 | 178.27 (11) | C28—C27—C32—F2 | −177.23 (10) |
C17—C18—C23—C14 | −2.17 (17) | C26—C27—C32—F2 | 4.38 (15) |
C19—C18—C23—C22 | 0.01 (17) | C28—C27—C32—C31 | 3.48 (17) |
C17—C18—C23—C22 | 179.57 (11) | C26—C27—C32—C31 | −174.91 (11) |
C15—C14—C23—C18 | 1.08 (17) |
Cg1 and Cg2 are the centroids of the C14–C18/C23 and C1–C6 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···N2 | 0.88 (3) | 2.06 (3) | 2.6786 (13) | 127 (2) |
C10—H10A···F1i | 0.97 | 2.37 | 3.3135 (14) | 163 |
C30—H30A···F2ii | 0.93 | 2.45 | 3.1525 (17) | 132 |
C5—H5A···Cg1iii | 0.93 | 2.94 | 3.6110 (14) | 131 |
C33—H33C···Cg2iv | 0.96 | 2.93 | 3.7253 (15) | 141 |
Symmetry codes: (i) x, y+1, z; (ii) −x+1, y+1/2, −z−1/2; (iii) x, −y−1/2, z−3/2; (iv) x, −y−1/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C33H26F2N2O2 |
Mr | 520.56 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 16.664 (2), 9.7226 (11), 15.507 (2) |
β (°) | 96.447 (2) |
V (Å3) | 2496.5 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.49 × 0.32 × 0.13 |
Data collection | |
Diffractometer | Bruker APEXII DUO CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.955, 0.988 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 31956, 10068, 7622 |
Rint | 0.040 |
(sin θ/λ)max (Å−1) | 0.787 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.052, 0.181, 1.09 |
No. of reflections | 10068 |
No. of parameters | 357 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.50, −0.34 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg1 and Cg2 are the centroids of the C14–C18/C23 and C1–C6 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···N2 | 0.88 (3) | 2.06 (3) | 2.6786 (13) | 127 (2) |
C10—H10A···F1i | 0.97 | 2.37 | 3.3135 (14) | 163 |
C30—H30A···F2ii | 0.93 | 2.45 | 3.1525 (17) | 132 |
C5—H5A···Cg1iii | 0.93 | 2.94 | 3.6110 (14) | 131 |
C33—H33C···Cg2iv | 0.96 | 2.93 | 3.7253 (15) | 141 |
Symmetry codes: (i) x, y+1, z; (ii) −x+1, y+1/2, −z−1/2; (iii) x, −y−1/2, z−3/2; (iv) x, −y−1/2, z−1/2. |
Acknowledgements
The synthetic chemistry work was funded by Universiti Sains Malaysia (USM) under the University Research grant No. 1001/PKIMIA/811133 and RSK thanks Universiti Sains Malaysia for the award of post doctoral fellowship. HKF and CSY thank USM for the Research University Grant No. 1001/PFIZIK/811160.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Due to their varying biological activities, heterocyclic compounds with fused five- and six-membered rings occupy an important place among organic compounds. 1,3-Dipolar cycloadditions are efficient methods for the construction of heterocyclic rings (Tsuge & Kanemasa, 1989; Grigg & Sridharan, 1993). In particular, the chemistry of azomethine ylides gained significance as it serves as a facile route for the construction of nitrogen-containing five-membered heterocycles which constitute the central skeleton of numerous natural products (Daly et al., 1986; Waldmann, 1995). Taking into account the importance of aforesaid heterocycles, we have undertaken the X-ray diffraction study of the title compound and the results are presented here.
The molecular structure of the title compound is shown in Fig. 1. The 4-piperidone ring (C8—C9/N1/C10—C12) adopts a half-chair conformation, with puckering parameters Q = 0.6127 (11) Å, θ = 142.74 (10)° and φ = 119.46 (17)° (Cremer & Pople, 1975). The two fused pyrrolidine rings with atom sequences N1/C10/C11/C24/C13 and N2/C24/C11/C26/C25, adopt a half-chair (twist on N1–C10) and an envelope (flap on atom N2) conformations, respectively. The puckering parameters are Q = 0.4498 (11) Å, φ = 206.94 (14)° for the N1/C10/C11/C24/C13 pyrrolidine ring and Q = 0.4187 (11) Å, φ = 359.86 (16)° for the N2/C24/C11/C26/C25 pyrrolidine ring. The two benzene rings (C1–C6 and C27–C32) make dihedral angles of 29.58 (5) and 76.33 (5)°, respectively with the mean plane of 1,2-dihydroacenaphthylene (C13–C24). The geometric parameters are consistent to those observed in a closely related structure (Kumar et al., 2010). An intramolecular O2—H1O2···N2 hydrogen bond stabilize the molecular structure.
In the crystal structure, intermolecular C10—H10A···F1 and C20—H30A···F2 hydrogen bonds (Table 1) link the molecules into chains propagating along the [010] direction (Fig. 2). Weak intermolecular C—H···π interactions (Table 1) are also observed.