organic compounds
2,6-Bis(2-methyl-1,3-diazinan-2-yl)pyridine
aInstitut für Organische Chemie und Chemische Biologie, Goethe-Universität Frankfurt, Max-von-Laue-Strasse 7, 60438 Frankfurt/Main, Germany, and bInstitut für Anorganische und Analytische Chemie, Goethe-Universität Frankfurt, Max-von-Laue-Strasse 7, 60438 Frankfurt/Main, Germany
*Correspondence e-mail: bolte@chemie.uni-frankfurt.de
The title compound, C15H25N5, is an aminalization product between 2,6-diacetylpyridine and 1,3-diaminopropane. It crystallizes with two independent molecules in the with different conformations. In the first molecule, the methyl groups are cis oriented with respect to the pyridine ring [N—C—C—C torsion angles = 72.5 (1) and 80.3 (1)°], while they are trans oriented in the second molecule [N—C—C—C torsion angles = 82.6 (1) and −90.8 (1)°]. Each of the two molecules forms centrosymmetric dimers held together by N—H⋯N hydrogen bonds, thus forming R22(16) rings. The two dimers are interlinked by additional N—H⋯N bonds into R44(14) rings, building chains along the a axis. These patterns influence the orientation (either equatorial or axial) of the N—H bonds.
Related literature
For 2,6-diacetylpyridine, see: Burnet et al. (2003) and for 1,3-diaminopropane, see: Thalladi et al. (2000).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: X-AREA (Stoe & Cie, 2001); cell X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: XP (Sheldrick, 2008); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536810050063/ng5081sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810050063/ng5081Isup2.hkl
The starting compounds were purchased from Aldrich and Lancaster and utilized for a cocrystallization experiment without purification. 2,6-diacetylpyridine (10 mg) was added to an excess of 1,3-diaminopropane (0.8 ml). The mixture in a flask was set aside at room temperature. After several months colourless crystals were obtained.
H atoms bonded to C were refined with fixed individual displacement parameters [U(H) = 1.2 Ueq(C)] using a riding model with Caromatic—H = 0.95 Å, Cmethylene—H = 0.99 Å, or Ctertiary—H = 0.98 Å, respectively. H atoms bonded to N were freely refined.
The aim of this investigation was to cocrystallize 2,6-diacetylpyridine (Burnet et al., 2003) with 1,3-diaminopropane (Thalladi et al., 2000). Unfortunately crystals of the title compound were obtained due to an aminalization reaction between the starting compounds (Fig. 2).
For 2,6-diacetylpyridine, see: Burnet et al. (2003) and for 1,3-diaminopropane, see: Thalladi et al. (2000).
Data collection: X-AREA (Stoe & Cie, 2001); cell
X-AREA (Stoe & Cie, 2001); data reduction: X-AREA (Stoe & Cie, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: XP (Sheldrick, 2008); software used to prepare material for publication: publCIF (Westrip, 2010).C15H25N5 | F(000) = 1200 |
Mr = 275.40 | Dx = 1.171 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 38746 reflections |
a = 18.715 (4) Å | θ = 3.3–25.7° |
b = 7.512 (2) Å | µ = 0.07 mm−1 |
c = 22.730 (5) Å | T = 173 K |
β = 102.07 (3)° | Block, colourless |
V = 3124.9 (13) Å3 | 0.40 × 0.32 × 0.30 mm |
Z = 8 |
Stoe IPDS II two-circle diffractometer | 4924 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.050 |
Graphite monochromator | θmax = 25.5°, θmin = 3.3° |
ω scans | h = −22→22 |
41522 measured reflections | k = −9→9 |
5758 independent reflections | l = −27→27 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.036 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.098 | w = 1/[σ2(Fo2) + (0.0513P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.35 | (Δ/σ)max < 0.001 |
5758 reflections | Δρmax = 0.28 e Å−3 |
394 parameters | Δρmin = −0.18 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0182 (13) |
C15H25N5 | V = 3124.9 (13) Å3 |
Mr = 275.40 | Z = 8 |
Monoclinic, P21/c | Mo Kα radiation |
a = 18.715 (4) Å | µ = 0.07 mm−1 |
b = 7.512 (2) Å | T = 173 K |
c = 22.730 (5) Å | 0.40 × 0.32 × 0.30 mm |
β = 102.07 (3)° |
Stoe IPDS II two-circle diffractometer | 4924 reflections with I > 2σ(I) |
41522 measured reflections | Rint = 0.050 |
5758 independent reflections |
R[F2 > 2σ(F2)] = 0.036 | 0 restraints |
wR(F2) = 0.098 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.35 | Δρmax = 0.28 e Å−3 |
5758 reflections | Δρmin = −0.18 e Å−3 |
394 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.01315 (5) | 0.64048 (12) | 0.38741 (4) | 0.0208 (2) | |
C2 | 0.06102 (6) | 0.70659 (15) | 0.35629 (5) | 0.0219 (2) | |
C3 | 0.03859 (7) | 0.78073 (19) | 0.29935 (6) | 0.0337 (3) | |
H3 | 0.0733 | 0.8227 | 0.2775 | 0.040* | |
C4 | −0.03613 (7) | 0.7920 (2) | 0.27508 (6) | 0.0419 (4) | |
H4 | −0.0530 | 0.8449 | 0.2367 | 0.050* | |
C5 | −0.08588 (6) | 0.72571 (18) | 0.30721 (6) | 0.0336 (3) | |
H5 | −0.1370 | 0.7337 | 0.2915 | 0.040* | |
C6 | −0.05903 (6) | 0.64714 (15) | 0.36306 (5) | 0.0222 (2) | |
C7 | 0.14237 (5) | 0.67781 (15) | 0.38678 (5) | 0.0205 (2) | |
C8 | 0.15860 (6) | 0.47996 (15) | 0.38048 (5) | 0.0262 (3) | |
H8A | 0.1275 | 0.4091 | 0.4013 | 0.039* | |
H8B | 0.2101 | 0.4565 | 0.3984 | 0.039* | |
H8C | 0.1486 | 0.4476 | 0.3378 | 0.039* | |
N2 | 0.15809 (5) | 0.71862 (13) | 0.45185 (4) | 0.0226 (2) | |
H2N | 0.1276 (8) | 0.658 (2) | 0.4698 (6) | 0.034 (4)* | |
C9 | 0.15049 (7) | 0.90860 (17) | 0.46430 (6) | 0.0319 (3) | |
H9A | 0.1608 | 0.9292 | 0.5083 | 0.038* | |
H9B | 0.0999 | 0.9482 | 0.4473 | 0.038* | |
C10 | 0.20407 (7) | 1.01382 (17) | 0.43596 (6) | 0.0363 (3) | |
H10A | 0.2548 | 0.9798 | 0.4548 | 0.044* | |
H10B | 0.1982 | 1.1428 | 0.4426 | 0.044* | |
C11 | 0.18907 (7) | 0.97400 (16) | 0.36861 (6) | 0.0325 (3) | |
H11A | 0.1409 | 1.0243 | 0.3495 | 0.039* | |
H11B | 0.2266 | 1.0338 | 0.3507 | 0.039* | |
N3 | 0.18942 (5) | 0.78179 (13) | 0.35523 (4) | 0.0255 (2) | |
H3N | 0.2350 (8) | 0.7418 (18) | 0.3682 (6) | 0.028 (3)* | |
C12 | −0.10820 (6) | 0.56698 (15) | 0.40310 (5) | 0.0228 (2) | |
C13 | −0.11675 (7) | 0.70647 (19) | 0.45014 (6) | 0.0357 (3) | |
H13A | −0.0687 | 0.7351 | 0.4749 | 0.054* | |
H13B | −0.1483 | 0.6593 | 0.4758 | 0.054* | |
H13C | −0.1388 | 0.8144 | 0.4299 | 0.054* | |
N4 | −0.18088 (5) | 0.52752 (14) | 0.36689 (5) | 0.0267 (2) | |
H4N | −0.2100 (9) | 0.506 (2) | 0.3935 (7) | 0.041 (4)* | |
C14 | −0.18228 (7) | 0.37221 (18) | 0.32745 (6) | 0.0339 (3) | |
H14A | −0.1575 | 0.4035 | 0.2944 | 0.041* | |
H14B | −0.2337 | 0.3429 | 0.3093 | 0.041* | |
C15 | −0.14553 (7) | 0.20842 (19) | 0.35991 (7) | 0.0405 (3) | |
H15A | −0.1422 | 0.1137 | 0.3303 | 0.049* | |
H15B | −0.1750 | 0.1627 | 0.3881 | 0.049* | |
C16 | −0.06904 (7) | 0.25698 (17) | 0.39462 (7) | 0.0353 (3) | |
H16A | −0.0463 | 0.1529 | 0.4180 | 0.042* | |
H16B | −0.0380 | 0.2916 | 0.3662 | 0.042* | |
N5 | −0.07435 (5) | 0.40640 (14) | 0.43568 (4) | 0.0270 (2) | |
H5N | −0.0281 (8) | 0.4360 (19) | 0.4533 (6) | 0.033 (4)* | |
N1' | 0.51250 (5) | 0.59589 (12) | 0.38384 (4) | 0.0199 (2) | |
C2' | 0.47119 (6) | 0.66760 (14) | 0.33387 (5) | 0.0204 (2) | |
C3' | 0.49877 (6) | 0.70014 (16) | 0.28223 (5) | 0.0250 (3) | |
H3' | 0.4691 | 0.7533 | 0.2477 | 0.030* | |
C4' | 0.57073 (6) | 0.65272 (16) | 0.28268 (5) | 0.0264 (3) | |
H4' | 0.5907 | 0.6729 | 0.2481 | 0.032* | |
C5' | 0.61335 (6) | 0.57584 (16) | 0.33375 (5) | 0.0249 (2) | |
H5' | 0.6624 | 0.5416 | 0.3346 | 0.030* | |
C6' | 0.58237 (5) | 0.55030 (14) | 0.38369 (5) | 0.0200 (2) | |
C7' | 0.39231 (6) | 0.71995 (15) | 0.33837 (5) | 0.0220 (2) | |
C8' | 0.39689 (6) | 0.90350 (16) | 0.36847 (6) | 0.0302 (3) | |
H8'1 | 0.4269 | 0.8954 | 0.4092 | 0.045* | |
H8'2 | 0.3477 | 0.9438 | 0.3705 | 0.045* | |
H8'3 | 0.4190 | 0.9886 | 0.3449 | 0.045* | |
N2' | 0.34706 (5) | 0.73352 (14) | 0.27711 (4) | 0.0272 (2) | |
H2'N | 0.3052 (8) | 0.7831 (19) | 0.2808 (6) | 0.033 (4)* | |
C9' | 0.33042 (6) | 0.55788 (17) | 0.24825 (5) | 0.0288 (3) | |
H9'1 | 0.3758 | 0.5078 | 0.2390 | 0.035* | |
H9'2 | 0.2950 | 0.5741 | 0.2097 | 0.035* | |
C10' | 0.29904 (6) | 0.42461 (17) | 0.28693 (5) | 0.0291 (3) | |
H10C | 0.2955 | 0.3055 | 0.2679 | 0.035* | |
H10D | 0.2494 | 0.4621 | 0.2904 | 0.035* | |
C11' | 0.34896 (6) | 0.41589 (15) | 0.34943 (5) | 0.0248 (2) | |
H11C | 0.3271 | 0.3373 | 0.3759 | 0.030* | |
H11D | 0.3971 | 0.3664 | 0.3465 | 0.030* | |
N3' | 0.35806 (5) | 0.59662 (13) | 0.37478 (4) | 0.0221 (2) | |
H3'N | 0.3836 (8) | 0.5952 (18) | 0.4116 (7) | 0.030 (3)* | |
C12' | 0.62660 (6) | 0.47668 (15) | 0.44412 (5) | 0.0208 (2) | |
C13' | 0.66464 (7) | 0.63378 (17) | 0.48080 (6) | 0.0335 (3) | |
H13D | 0.6278 | 0.7182 | 0.4887 | 0.050* | |
H13E | 0.6969 | 0.6935 | 0.4581 | 0.050* | |
H13F | 0.6936 | 0.5902 | 0.5191 | 0.050* | |
N4' | 0.68328 (5) | 0.35340 (13) | 0.43324 (5) | 0.0256 (2) | |
H4'N | 0.7143 (7) | 0.3368 (18) | 0.4685 (6) | 0.029 (3)* | |
C14' | 0.65331 (7) | 0.18110 (18) | 0.40894 (6) | 0.0360 (3) | |
H14C | 0.6943 | 0.0982 | 0.4084 | 0.043* | |
H14D | 0.6268 | 0.1983 | 0.3668 | 0.043* | |
C15' | 0.60164 (7) | 0.09624 (18) | 0.44454 (7) | 0.0407 (3) | |
H15C | 0.5785 | −0.0105 | 0.4231 | 0.049* | |
H15D | 0.6295 | 0.0584 | 0.4845 | 0.049* | |
C16' | 0.54299 (7) | 0.22950 (18) | 0.45217 (6) | 0.0364 (3) | |
H16C | 0.5118 | 0.2578 | 0.4125 | 0.044* | |
H16D | 0.5117 | 0.1777 | 0.4779 | 0.044* | |
N5' | 0.57811 (5) | 0.39283 (15) | 0.48008 (4) | 0.0281 (2) | |
H5'N | 0.5420 (9) | 0.474 (2) | 0.4791 (7) | 0.045 (4)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0161 (4) | 0.0239 (5) | 0.0212 (5) | −0.0001 (3) | 0.0011 (3) | −0.0006 (4) |
C2 | 0.0188 (5) | 0.0242 (6) | 0.0218 (6) | −0.0005 (4) | 0.0018 (4) | 0.0006 (4) |
C3 | 0.0234 (6) | 0.0486 (8) | 0.0277 (6) | −0.0040 (5) | 0.0017 (5) | 0.0137 (6) |
C4 | 0.0289 (7) | 0.0595 (9) | 0.0320 (7) | −0.0031 (6) | −0.0056 (5) | 0.0224 (6) |
C5 | 0.0178 (6) | 0.0443 (7) | 0.0342 (7) | 0.0009 (5) | −0.0045 (5) | 0.0100 (6) |
C6 | 0.0173 (5) | 0.0243 (6) | 0.0236 (6) | 0.0012 (4) | 0.0009 (4) | −0.0018 (4) |
C7 | 0.0159 (5) | 0.0249 (6) | 0.0201 (5) | −0.0005 (4) | 0.0023 (4) | 0.0017 (4) |
C8 | 0.0202 (5) | 0.0270 (6) | 0.0303 (6) | 0.0006 (4) | 0.0028 (5) | −0.0012 (5) |
N2 | 0.0191 (5) | 0.0267 (5) | 0.0213 (5) | −0.0009 (4) | 0.0023 (4) | 0.0007 (4) |
C9 | 0.0309 (6) | 0.0304 (6) | 0.0322 (6) | 0.0033 (5) | 0.0013 (5) | −0.0073 (5) |
C10 | 0.0323 (7) | 0.0230 (6) | 0.0488 (8) | −0.0019 (5) | −0.0025 (6) | −0.0020 (5) |
C11 | 0.0230 (6) | 0.0291 (6) | 0.0439 (7) | −0.0021 (5) | 0.0036 (5) | 0.0120 (6) |
N3 | 0.0168 (5) | 0.0310 (5) | 0.0289 (5) | −0.0009 (4) | 0.0052 (4) | 0.0061 (4) |
C12 | 0.0157 (5) | 0.0292 (6) | 0.0226 (5) | 0.0007 (4) | 0.0018 (4) | −0.0027 (5) |
C13 | 0.0329 (7) | 0.0418 (7) | 0.0331 (7) | 0.0005 (6) | 0.0084 (5) | −0.0108 (6) |
N4 | 0.0139 (4) | 0.0379 (6) | 0.0275 (5) | −0.0007 (4) | 0.0030 (4) | −0.0043 (4) |
C14 | 0.0268 (6) | 0.0429 (8) | 0.0298 (6) | −0.0083 (5) | 0.0009 (5) | −0.0097 (5) |
C15 | 0.0377 (7) | 0.0336 (7) | 0.0498 (8) | −0.0065 (6) | 0.0080 (6) | −0.0106 (6) |
C16 | 0.0289 (6) | 0.0289 (7) | 0.0483 (8) | 0.0030 (5) | 0.0089 (6) | 0.0010 (6) |
N5 | 0.0191 (5) | 0.0340 (6) | 0.0264 (5) | −0.0008 (4) | 0.0012 (4) | 0.0034 (4) |
N1' | 0.0170 (4) | 0.0236 (5) | 0.0187 (4) | 0.0017 (3) | 0.0028 (3) | 0.0017 (4) |
C2' | 0.0189 (5) | 0.0215 (5) | 0.0202 (5) | 0.0008 (4) | 0.0023 (4) | 0.0024 (4) |
C3' | 0.0245 (6) | 0.0293 (6) | 0.0207 (6) | 0.0008 (5) | 0.0036 (4) | 0.0076 (5) |
C4' | 0.0267 (6) | 0.0338 (6) | 0.0208 (6) | −0.0018 (5) | 0.0093 (4) | 0.0047 (5) |
C5' | 0.0180 (5) | 0.0328 (6) | 0.0247 (6) | 0.0012 (4) | 0.0066 (4) | 0.0021 (5) |
C6' | 0.0173 (5) | 0.0216 (5) | 0.0208 (5) | 0.0003 (4) | 0.0033 (4) | 0.0003 (4) |
C7' | 0.0189 (5) | 0.0275 (6) | 0.0189 (5) | 0.0041 (4) | 0.0025 (4) | 0.0033 (4) |
C8' | 0.0259 (6) | 0.0290 (6) | 0.0351 (7) | 0.0041 (5) | 0.0054 (5) | 0.0001 (5) |
N2' | 0.0222 (5) | 0.0360 (6) | 0.0212 (5) | 0.0102 (4) | −0.0005 (4) | 0.0057 (4) |
C9' | 0.0226 (6) | 0.0433 (7) | 0.0183 (5) | 0.0057 (5) | −0.0005 (4) | −0.0012 (5) |
C10' | 0.0198 (5) | 0.0392 (7) | 0.0276 (6) | −0.0005 (5) | 0.0032 (5) | −0.0072 (5) |
C11' | 0.0210 (5) | 0.0284 (6) | 0.0254 (6) | 0.0007 (4) | 0.0057 (4) | 0.0016 (5) |
N3' | 0.0188 (4) | 0.0295 (5) | 0.0173 (5) | 0.0020 (4) | 0.0023 (4) | 0.0013 (4) |
C12' | 0.0168 (5) | 0.0264 (6) | 0.0192 (5) | 0.0033 (4) | 0.0035 (4) | 0.0016 (4) |
C13' | 0.0319 (6) | 0.0324 (7) | 0.0306 (6) | 0.0023 (5) | −0.0060 (5) | −0.0019 (5) |
N4' | 0.0179 (5) | 0.0331 (5) | 0.0249 (5) | 0.0073 (4) | 0.0026 (4) | 0.0025 (4) |
C14' | 0.0372 (7) | 0.0330 (7) | 0.0345 (7) | 0.0135 (5) | 0.0000 (6) | −0.0044 (5) |
C15' | 0.0383 (7) | 0.0274 (7) | 0.0484 (8) | −0.0012 (5) | −0.0094 (6) | 0.0076 (6) |
C16' | 0.0224 (6) | 0.0410 (7) | 0.0421 (8) | −0.0046 (5) | −0.0018 (5) | 0.0194 (6) |
N5' | 0.0213 (5) | 0.0400 (6) | 0.0242 (5) | 0.0072 (4) | 0.0074 (4) | 0.0091 (4) |
N1—C2 | 1.3471 (15) | N1'—C2' | 1.3456 (14) |
N1—C6 | 1.3494 (14) | N1'—C6' | 1.3523 (14) |
C2—C3 | 1.3908 (17) | C2'—C3' | 1.3992 (16) |
C2—C7 | 1.5504 (15) | C2'—C7' | 1.5515 (15) |
C3—C4 | 1.3943 (18) | C3'—C4' | 1.3909 (16) |
C3—H3 | 0.9500 | C3'—H3' | 0.9500 |
C4—C5 | 1.3903 (19) | C4'—C5' | 1.3892 (17) |
C4—H4 | 0.9500 | C4'—H4' | 0.9500 |
C5—C6 | 1.3949 (17) | C5'—C6' | 1.3916 (16) |
C5—H5 | 0.9500 | C5'—H5' | 0.9500 |
C6—C12 | 1.5453 (16) | C6'—C12' | 1.5499 (15) |
C7—N3 | 1.4709 (14) | C7'—N2' | 1.4742 (15) |
C7—N2 | 1.4786 (15) | C7'—N3' | 1.4752 (15) |
C7—C8 | 1.5297 (16) | C7'—C8' | 1.5337 (17) |
C8—H8A | 0.9800 | C8'—H8'1 | 0.9800 |
C8—H8B | 0.9800 | C8'—H8'2 | 0.9800 |
C8—H8C | 0.9800 | C8'—H8'3 | 0.9800 |
N2—C9 | 1.4676 (16) | N2'—C9' | 1.4774 (17) |
N2—H2N | 0.893 (16) | N2'—H2'N | 0.887 (15) |
C9—C10 | 1.5217 (19) | C9'—C10' | 1.5284 (18) |
C9—H9A | 0.9900 | C9'—H9'1 | 0.9900 |
C9—H9B | 0.9900 | C9'—H9'2 | 0.9900 |
C10—C11 | 1.527 (2) | C10'—C11' | 1.5297 (17) |
C10—H10A | 0.9900 | C10'—H10C | 0.9900 |
C10—H10B | 0.9900 | C10'—H10D | 0.9900 |
C11—N3 | 1.4758 (17) | C11'—N3' | 1.4707 (15) |
C11—H11A | 0.9900 | C11'—H11C | 0.9900 |
C11—H11B | 0.9900 | C11'—H11D | 0.9900 |
N3—H3N | 0.894 (14) | N3'—H3'N | 0.873 (15) |
C12—N4 | 1.4653 (14) | C12'—N4' | 1.4676 (14) |
C12—N5 | 1.4862 (15) | C12'—N5' | 1.4830 (15) |
C12—C13 | 1.5293 (17) | C12'—C13' | 1.5318 (16) |
C13—H13A | 0.9800 | C13'—H13D | 0.9800 |
C13—H13B | 0.9800 | C13'—H13E | 0.9800 |
C13—H13C | 0.9800 | C13'—H13F | 0.9800 |
N4—C14 | 1.4683 (16) | N4'—C14' | 1.4715 (17) |
N4—H4N | 0.908 (16) | N4'—H4'N | 0.894 (14) |
C14—C15 | 1.523 (2) | C14'—C15' | 1.524 (2) |
C14—H14A | 0.9900 | C14'—H14C | 0.9900 |
C14—H14B | 0.9900 | C14'—H14D | 0.9900 |
C15—C16 | 1.5271 (19) | C15'—C16' | 1.522 (2) |
C15—H15A | 0.9900 | C15'—H15C | 0.9900 |
C15—H15B | 0.9900 | C15'—H15D | 0.9900 |
C16—N5 | 1.4764 (17) | C16'—N5' | 1.4715 (18) |
C16—H16A | 0.9900 | C16'—H16C | 0.9900 |
C16—H16B | 0.9900 | C16'—H16D | 0.9900 |
N5—H5N | 0.901 (15) | N5'—H5'N | 0.905 (17) |
C2—N1—C6 | 119.31 (9) | C2'—N1'—C6' | 118.98 (9) |
N1—C2—C3 | 122.14 (10) | N1'—C2'—C3' | 122.03 (10) |
N1—C2—C7 | 114.37 (9) | N1'—C2'—C7' | 115.63 (9) |
C3—C2—C7 | 123.29 (10) | C3'—C2'—C7' | 122.28 (10) |
C2—C3—C4 | 118.36 (12) | C4'—C3'—C2' | 118.40 (10) |
C2—C3—H3 | 120.8 | C4'—C3'—H3' | 120.8 |
C4—C3—H3 | 120.8 | C2'—C3'—H3' | 120.8 |
C5—C4—C3 | 119.79 (11) | C5'—C4'—C3' | 119.90 (11) |
C5—C4—H4 | 120.1 | C5'—C4'—H4' | 120.1 |
C3—C4—H4 | 120.1 | C3'—C4'—H4' | 120.1 |
C4—C5—C6 | 118.44 (11) | C4'—C5'—C6' | 118.32 (10) |
C4—C5—H5 | 120.8 | C4'—C5'—H5' | 120.8 |
C6—C5—H5 | 120.8 | C6'—C5'—H5' | 120.8 |
N1—C6—C5 | 121.89 (11) | N1'—C6'—C5' | 122.36 (10) |
N1—C6—C12 | 114.35 (9) | N1'—C6'—C12' | 115.19 (9) |
C5—C6—C12 | 123.73 (10) | C5'—C6'—C12' | 122.38 (9) |
N3—C7—N2 | 111.31 (9) | N2'—C7'—N3' | 110.01 (9) |
N3—C7—C8 | 108.63 (9) | N2'—C7'—C8' | 109.07 (9) |
N2—C7—C8 | 107.05 (9) | N3'—C7'—C8' | 107.73 (9) |
N3—C7—C2 | 109.88 (9) | N2'—C7'—C2' | 108.77 (9) |
N2—C7—C2 | 112.93 (9) | N3'—C7'—C2' | 114.13 (9) |
C8—C7—C2 | 106.82 (9) | C8'—C7'—C2' | 106.99 (9) |
C7—C8—H8A | 109.5 | C7'—C8'—H8'1 | 109.5 |
C7—C8—H8B | 109.5 | C7'—C8'—H8'2 | 109.5 |
H8A—C8—H8B | 109.5 | H8'1—C8'—H8'2 | 109.5 |
C7—C8—H8C | 109.5 | C7'—C8'—H8'3 | 109.5 |
H8A—C8—H8C | 109.5 | H8'1—C8'—H8'3 | 109.5 |
H8B—C8—H8C | 109.5 | H8'2—C8'—H8'3 | 109.5 |
C9—N2—C7 | 112.79 (9) | C7'—N2'—C9' | 112.56 (9) |
C9—N2—H2N | 108.2 (9) | C7'—N2'—H2'N | 106.5 (9) |
C7—N2—H2N | 109.7 (9) | C9'—N2'—H2'N | 108.0 (9) |
N2—C9—C10 | 108.94 (10) | N2'—C9'—C10' | 113.59 (10) |
N2—C9—H9A | 109.9 | N2'—C9'—H9'1 | 108.8 |
C10—C9—H9A | 109.9 | C10'—C9'—H9'1 | 108.8 |
N2—C9—H9B | 109.9 | N2'—C9'—H9'2 | 108.8 |
C10—C9—H9B | 109.9 | C10'—C9'—H9'2 | 108.8 |
H9A—C9—H9B | 108.3 | H9'1—C9'—H9'2 | 107.7 |
C9—C10—C11 | 108.86 (10) | C9'—C10'—C11' | 109.20 (9) |
C9—C10—H10A | 109.9 | C9'—C10'—H10C | 109.8 |
C11—C10—H10A | 109.9 | C11'—C10'—H10C | 109.8 |
C9—C10—H10B | 109.9 | C9'—C10'—H10D | 109.8 |
C11—C10—H10B | 109.9 | C11'—C10'—H10D | 109.8 |
H10A—C10—H10B | 108.3 | H10C—C10'—H10D | 108.3 |
N3—C11—C10 | 112.98 (10) | N3'—C11'—C10' | 108.81 (9) |
N3—C11—H11A | 109.0 | N3'—C11'—H11C | 109.9 |
C10—C11—H11A | 109.0 | C10'—C11'—H11C | 109.9 |
N3—C11—H11B | 109.0 | N3'—C11'—H11D | 109.9 |
C10—C11—H11B | 109.0 | C10'—C11'—H11D | 109.9 |
H11A—C11—H11B | 107.8 | H11C—C11'—H11D | 108.3 |
C7—N3—C11 | 112.97 (10) | C11'—N3'—C7' | 112.85 (9) |
C7—N3—H3N | 106.7 (9) | C11'—N3'—H3'N | 111.1 (9) |
C11—N3—H3N | 107.8 (9) | C7'—N3'—H3'N | 109.3 (9) |
N4—C12—N5 | 111.38 (9) | N4'—C12'—N5' | 111.85 (9) |
N4—C12—C13 | 108.09 (9) | N4'—C12'—C13' | 107.93 (9) |
N5—C12—C13 | 107.68 (10) | N5'—C12'—C13' | 107.19 (9) |
N4—C12—C6 | 110.20 (9) | N4'—C12'—C6' | 110.29 (9) |
N5—C12—C6 | 111.44 (9) | N5'—C12'—C6' | 111.41 (8) |
C13—C12—C6 | 107.89 (10) | C13'—C12'—C6' | 107.99 (9) |
C12—C13—H13A | 109.5 | C12'—C13'—H13D | 109.5 |
C12—C13—H13B | 109.5 | C12'—C13'—H13E | 109.5 |
H13A—C13—H13B | 109.5 | H13D—C13'—H13E | 109.5 |
C12—C13—H13C | 109.5 | C12'—C13'—H13F | 109.5 |
H13A—C13—H13C | 109.5 | H13D—C13'—H13F | 109.5 |
H13B—C13—H13C | 109.5 | H13E—C13'—H13F | 109.5 |
C12—N4—C14 | 113.55 (9) | C12'—N4'—C14' | 112.71 (9) |
C12—N4—H4N | 106.1 (10) | C12'—N4'—H4'N | 107.1 (9) |
C14—N4—H4N | 109.3 (10) | C14'—N4'—H4'N | 109.8 (9) |
N4—C14—C15 | 113.43 (11) | N4'—C14'—C15' | 113.76 (11) |
N4—C14—H14A | 108.9 | N4'—C14'—H14C | 108.8 |
C15—C14—H14A | 108.9 | C15'—C14'—H14C | 108.8 |
N4—C14—H14B | 108.9 | N4'—C14'—H14D | 108.8 |
C15—C14—H14B | 108.9 | C15'—C14'—H14D | 108.8 |
H14A—C14—H14B | 107.7 | H14C—C14'—H14D | 107.7 |
C14—C15—C16 | 109.68 (11) | C16'—C15'—C14' | 109.76 (11) |
C14—C15—H15A | 109.7 | C16'—C15'—H15C | 109.7 |
C16—C15—H15A | 109.7 | C14'—C15'—H15C | 109.7 |
C14—C15—H15B | 109.7 | C16'—C15'—H15D | 109.7 |
C16—C15—H15B | 109.7 | C14'—C15'—H15D | 109.7 |
H15A—C15—H15B | 108.2 | H15C—C15'—H15D | 108.2 |
N5—C16—C15 | 109.18 (10) | N5'—C16'—C15' | 109.26 (10) |
N5—C16—H16A | 109.8 | N5'—C16'—H16C | 109.8 |
C15—C16—H16A | 109.8 | C15'—C16'—H16C | 109.8 |
N5—C16—H16B | 109.8 | N5'—C16'—H16D | 109.8 |
C15—C16—H16B | 109.8 | C15'—C16'—H16D | 109.8 |
H16A—C16—H16B | 108.3 | H16C—C16'—H16D | 108.3 |
C16—N5—C12 | 112.33 (9) | C16'—N5'—C12' | 112.71 (10) |
C16—N5—H5N | 106.5 (9) | C16'—N5'—H5'N | 106.6 (10) |
C12—N5—H5N | 106.9 (9) | C12'—N5'—H5'N | 103.9 (10) |
C6—N1—C2—C3 | −0.52 (17) | C6'—N1'—C2'—C3' | −1.46 (16) |
C6—N1—C2—C7 | −175.43 (9) | C6'—N1'—C2'—C7' | −178.67 (9) |
N1—C2—C3—C4 | 2.3 (2) | N1'—C2'—C3'—C4' | 1.42 (17) |
C7—C2—C3—C4 | 176.79 (12) | C7'—C2'—C3'—C4' | 178.44 (10) |
C2—C3—C4—C5 | −1.6 (2) | C2'—C3'—C4'—C5' | −0.30 (18) |
C3—C4—C5—C6 | −0.8 (2) | C3'—C4'—C5'—C6' | −0.70 (18) |
C2—N1—C6—C5 | −2.05 (17) | C2'—N1'—C6'—C5' | 0.39 (16) |
C2—N1—C6—C12 | 179.94 (9) | C2'—N1'—C6'—C12' | 177.37 (9) |
C4—C5—C6—N1 | 2.68 (19) | C4'—C5'—C6'—N1' | 0.68 (17) |
C4—C5—C6—C12 | −179.50 (12) | C4'—C5'—C6'—C12' | −176.09 (10) |
N1—C2—C7—N3 | −169.79 (9) | N1'—C2'—C7'—N2' | −159.75 (9) |
C3—C2—C7—N3 | 15.36 (15) | C3'—C2'—C7'—N2' | 23.05 (14) |
N1—C2—C7—N2 | −44.86 (13) | N1'—C2'—C7'—N3' | −36.50 (13) |
C3—C2—C7—N2 | 140.29 (12) | C3'—C2'—C7'—N3' | 146.30 (11) |
N1—C2—C7—C8 | 72.55 (12) | N1'—C2'—C7'—C8' | 82.56 (12) |
C3—C2—C7—C8 | −102.30 (13) | C3'—C2'—C7'—C8' | −94.63 (12) |
N3—C7—N2—C9 | 56.72 (12) | N3'—C7'—N2'—C9' | −53.26 (12) |
C8—C7—N2—C9 | 175.30 (9) | C8'—C7'—N2'—C9' | −171.21 (10) |
C2—C7—N2—C9 | −67.42 (12) | C2'—C7'—N2'—C9' | 72.43 (12) |
C7—N2—C9—C10 | −60.40 (12) | C7'—N2'—C9'—C10' | 51.37 (13) |
N2—C9—C10—C11 | 57.28 (13) | N2'—C9'—C10'—C11' | −51.67 (13) |
C9—C10—C11—N3 | −53.72 (13) | C9'—C10'—C11'—N3' | 55.04 (12) |
N2—C7—N3—C11 | −50.79 (12) | C10'—C11'—N3'—C7' | −61.18 (11) |
C8—C7—N3—C11 | −168.41 (9) | N2'—C7'—N3'—C11' | 59.80 (11) |
C2—C7—N3—C11 | 75.06 (11) | C8'—C7'—N3'—C11' | 178.57 (9) |
C10—C11—N3—C7 | 50.98 (13) | C2'—C7'—N3'—C11' | −62.78 (12) |
N1—C6—C12—N4 | −161.87 (9) | N1'—C6'—C12'—N4' | 151.51 (9) |
C5—C6—C12—N4 | 20.16 (16) | C5'—C6'—C12'—N4' | −31.51 (15) |
N1—C6—C12—N5 | −37.69 (13) | N1'—C6'—C12'—N5' | 26.68 (13) |
C5—C6—C12—N5 | 144.34 (12) | C5'—C6'—C12'—N5' | −156.34 (10) |
N1—C6—C12—C13 | 80.32 (12) | N1'—C6'—C12'—C13' | −90.77 (11) |
C5—C6—C12—C13 | −97.65 (13) | C5'—C6'—C12'—C13' | 86.21 (13) |
N5—C12—N4—C14 | −51.19 (13) | N5'—C12'—N4'—C14' | 50.94 (13) |
C13—C12—N4—C14 | −169.29 (11) | C13'—C12'—N4'—C14' | 168.61 (10) |
C6—C12—N4—C14 | 73.03 (13) | C6'—C12'—N4'—C14' | −73.64 (12) |
C12—N4—C14—C15 | 50.09 (15) | C12'—N4'—C14'—C15' | −50.04 (13) |
N4—C14—C15—C16 | −51.80 (15) | N4'—C14'—C15'—C16' | 52.01 (14) |
C14—C15—C16—N5 | 55.64 (15) | C14'—C15'—C16'—N5' | −55.21 (14) |
C15—C16—N5—C12 | −59.44 (14) | C15'—C16'—N5'—C12' | 58.90 (13) |
N4—C12—N5—C16 | 56.92 (12) | N4'—C12'—N5'—C16' | −56.78 (12) |
C13—C12—N5—C16 | 175.27 (9) | C13'—C12'—N5'—C16' | −174.89 (9) |
C6—C12—N5—C16 | −66.59 (12) | C6'—C12'—N5'—C16' | 67.17 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2N···N5i | 0.893 (16) | 2.596 (15) | 3.3984 (16) | 149.9 (12) |
N4—H4N···N4′ii | 0.908 (16) | 2.623 (16) | 3.4716 (16) | 155.8 (13) |
N3′—H3′N···N5′iii | 0.873 (15) | 2.418 (15) | 3.2662 (17) | 164.2 (12) |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) x−1, y, z; (iii) −x+1, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C15H25N5 |
Mr | 275.40 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 173 |
a, b, c (Å) | 18.715 (4), 7.512 (2), 22.730 (5) |
β (°) | 102.07 (3) |
V (Å3) | 3124.9 (13) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.07 |
Crystal size (mm) | 0.40 × 0.32 × 0.30 |
Data collection | |
Diffractometer | Stoe IPDS II two-circle |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 41522, 5758, 4924 |
Rint | 0.050 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.036, 0.098, 1.35 |
No. of reflections | 5758 |
No. of parameters | 394 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.28, −0.18 |
Computer programs: X-AREA (Stoe & Cie, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), XP (Sheldrick, 2008), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2N···N5i | 0.893 (16) | 2.596 (15) | 3.3984 (16) | 149.9 (12) |
N4—H4N···N4'ii | 0.908 (16) | 2.623 (16) | 3.4716 (16) | 155.8 (13) |
N3'—H3'N···N5'iii | 0.873 (15) | 2.418 (15) | 3.2662 (17) | 164.2 (12) |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) x−1, y, z; (iii) −x+1, −y+1, −z+1. |
Acknowledgements
We gratefully thank Professor Dr Ernst Egert for his support.
References
Burnet, S., Hall, A. K., Hall, J. M., Harrowfield, J. M., Koutsantonis, G. A., Sanford, V., Sauter, D., Skelton, B. W. & White, A. H. (2003). Supramol. Chem. 15, 291–312. Web of Science CSD CrossRef CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Stoe & Cie (2001). X-AREA. Stoe & Cie, Darmstadt, Germany. Google Scholar
Thalladi, V. R., Boese, R. & Weiss, C.-H. (2000). Angew. Chem. Int. Ed. 39, 918–922. CrossRef CAS Google Scholar
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925. Web of Science CrossRef CAS IUCr Journals Google Scholar
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The aim of this investigation was to cocrystallize 2,6-diacetylpyridine (Burnet et al., 2003) with 1,3-diaminopropane (Thalladi et al., 2000). Unfortunately crystals of the title compound were obtained due to an aminalization reaction between the starting compounds (Fig. 2).