metal-organic compounds
Bis{benzyl 3-[(1H-indol-3-yl)methylidene]dithiocarbazato-κ2N3,S}palladium(II) N,N-dimethylformamide disolvate
aDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: khaledi@siswa.um.edu.my
In the title compound, [Pd(C17H14N3S2)2]·2C3H7NO, the deprotonated Schiff base ligand acts as an N,S-bidentate chelate, forming a five-membered ring with the metal atom. The PdII ion, located on an inversion center, is four-coordinated by two of the Schiff base ligands in a square-planar geometry. In the crystal, the indolic NH groups are bonded to the dimethylformamide (DMF) solvent molecules via an N—H⋯O interaction. In addition, C—H⋯S interactions are observed.
Related literature
For the et al. (2008). For the isotypic Cu(II) analog, see: Khaledi et al. (2009). For the PdII complex of the acetone Schiff base of S-methyldithiocarbazate, see: Ali et al. (2002).
of the ligand, see: KhalediExperimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010).
Supporting information
https://doi.org/10.1107/S1600536810051780/pv2368sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810051780/pv2368Isup2.hkl
The Schiff base ligand was prepared as reported previously (Khaledi et al., 2008). A solution of palladium(II) acetate (0.224 g, 1 mmol) in ethanol (30 ml) was added to an ethanolic solution (30 ml) of the ligand (0.65 g, 2 mmol) containing a few drops of triethylamine. The mixture was refluxed for an hour, then cooled to room temperature. The resulting brown solid was filtered, washed with cold ethanol and dried over siliga-gel. The title crystals were obtained by slow evaporation of a solution of the solid in DMF.
The C-bound H atoms were placed at calculated positions (C–H 0.93–0.97 Å) and were treated as riding on their parent C atoms. The N-bound H atom was located in a difference Fourier map, and was refined with a distance restraint of N–H 0.86±0.02. For all H atoms, Uiso(H) was set to 1.2–1.5 Ueq(carrier atom).
The title compound is isostructural with the CuII complex of the Schiff base ligand (Khaledi et al., 2009). The palladium(II) ion is four-coordinated by two azomethine nitrogen and two thioamide sulfur atoms in a trans-square planar geometry. It has been suggested that the square planar geometry of the
of S-alkyldithiocarbazate is trans when they are derived from whereas the ketone derivatives show cis geometry (Ali et al., 2002). Similar to the analogous CuII complex, the indole amino groups in the present structure are hydrogen bonded to the co-crystallized DMF molecules. Moreover, non-classical hydrogen bonds, C—H···N, C—H···O and C—H···S, are observed in the structure.For the
of the ligand, see: Khaledi et al. (2008). For the isostructural copper analog, see: Khaledi et al. (2009). For the PdII complex of the acetone Shiff base of S-methyldithiocarbazate, see: Ali et al. (2002).Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010).Fig. 1. Thermal ellipsoid plot of the title compound at the 30% probability level. Hydrogen atoms are drawn as spheres of arbitrary radius. |
[Pd(C17H14N3S2)2]·2C3H7NO | F(000) = 928 |
Mr = 901.46 | Dx = 1.448 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 3977 reflections |
a = 10.509 (4) Å | θ = 2.3–29.4° |
b = 20.320 (7) Å | µ = 0.70 mm−1 |
c = 10.925 (4) Å | T = 296 K |
β = 117.577 (5)° | Plate, red |
V = 2067.8 (12) Å3 | 0.30 × 0.15 × 0.03 mm |
Z = 2 |
Bruker APEXII CCD diffractometer | 4486 independent reflections |
Radiation source: fine-focus sealed tube | 3411 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.024 |
φ and ω scans | θmax = 27.0°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −13→12 |
Tmin = 0.818, Tmax = 0.979 | k = −25→25 |
11353 measured reflections | l = −11→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.030 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.074 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0332P)2 + 0.5126P] where P = (Fo2 + 2Fc2)/3 |
4486 reflections | (Δ/σ)max = 0.001 |
255 parameters | Δρmax = 0.27 e Å−3 |
1 restraint | Δρmin = −0.31 e Å−3 |
[Pd(C17H14N3S2)2]·2C3H7NO | V = 2067.8 (12) Å3 |
Mr = 901.46 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.509 (4) Å | µ = 0.70 mm−1 |
b = 20.320 (7) Å | T = 296 K |
c = 10.925 (4) Å | 0.30 × 0.15 × 0.03 mm |
β = 117.577 (5)° |
Bruker APEXII CCD diffractometer | 4486 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3411 reflections with I > 2σ(I) |
Tmin = 0.818, Tmax = 0.979 | Rint = 0.024 |
11353 measured reflections |
R[F2 > 2σ(F2)] = 0.030 | 1 restraint |
wR(F2) = 0.074 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.27 e Å−3 |
4486 reflections | Δρmin = −0.31 e Å−3 |
255 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Pd1 | 0.5000 | 0.5000 | 1.0000 | 0.03881 (8) | |
S1 | 0.50770 (7) | 0.38703 (3) | 1.00654 (7) | 0.05372 (16) | |
S2 | 0.60819 (8) | 0.29517 (3) | 0.86690 (7) | 0.05937 (18) | |
N1 | 0.7185 (2) | 0.50542 (10) | 0.5369 (2) | 0.0550 (5) | |
H1N | 0.753 (3) | 0.4818 (12) | 0.496 (3) | 0.066* | |
N2 | 0.56951 (19) | 0.48716 (8) | 0.85694 (19) | 0.0422 (4) | |
N3 | 0.60342 (19) | 0.42432 (8) | 0.82622 (19) | 0.0438 (4) | |
C1 | 0.6788 (3) | 0.48235 (11) | 0.6292 (3) | 0.0517 (6) | |
H1 | 0.6771 | 0.4381 | 0.6505 | 0.062* | |
C2 | 0.6405 (2) | 0.53413 (10) | 0.6881 (2) | 0.0438 (5) | |
C3 | 0.6598 (2) | 0.59335 (10) | 0.6243 (2) | 0.0434 (5) | |
C4 | 0.6429 (3) | 0.66054 (11) | 0.6388 (3) | 0.0547 (6) | |
H4 | 0.6111 | 0.6755 | 0.7005 | 0.066* | |
C5 | 0.6739 (3) | 0.70436 (13) | 0.5604 (3) | 0.0667 (7) | |
H5 | 0.6642 | 0.7493 | 0.5703 | 0.080* | |
C6 | 0.7198 (3) | 0.68253 (13) | 0.4660 (3) | 0.0692 (8) | |
H6 | 0.7388 | 0.7132 | 0.4134 | 0.083* | |
C7 | 0.7374 (3) | 0.61730 (13) | 0.4495 (3) | 0.0595 (6) | |
H7 | 0.7678 | 0.6029 | 0.3865 | 0.071* | |
C8 | 0.7080 (2) | 0.57292 (11) | 0.5304 (2) | 0.0479 (5) | |
C9 | 0.5902 (2) | 0.53485 (11) | 0.7881 (2) | 0.0449 (5) | |
H9 | 0.5681 | 0.5765 | 0.8081 | 0.054* | |
C10 | 0.5759 (2) | 0.37785 (10) | 0.8902 (2) | 0.0424 (5) | |
C11 | 0.6598 (3) | 0.29661 (12) | 0.7301 (3) | 0.0587 (6) | |
H11A | 0.6411 | 0.2533 | 0.6880 | 0.070* | |
H11B | 0.5969 | 0.3273 | 0.6602 | 0.070* | |
C12 | 0.8120 (3) | 0.31475 (10) | 0.7668 (3) | 0.0514 (6) | |
C13 | 0.8432 (3) | 0.32943 (13) | 0.6598 (3) | 0.0641 (7) | |
H13 | 0.7699 | 0.3284 | 0.5694 | 0.077* | |
C14 | 0.9801 (3) | 0.34555 (15) | 0.6844 (4) | 0.0792 (9) | |
H14 | 0.9987 | 0.3548 | 0.6108 | 0.095* | |
C15 | 1.0875 (3) | 0.34793 (16) | 0.8149 (4) | 0.0858 (10) | |
H15 | 1.1798 | 0.3595 | 0.8316 | 0.103* | |
C16 | 1.0600 (3) | 0.33329 (16) | 0.9226 (4) | 0.0884 (10) | |
H16 | 1.1340 | 0.3348 | 1.0126 | 0.106* | |
C17 | 0.9222 (3) | 0.31618 (14) | 0.8987 (3) | 0.0706 (7) | |
H17 | 0.9050 | 0.3057 | 0.9726 | 0.085* | |
O1 | 0.8241 (4) | 0.43495 (13) | 0.3888 (3) | 0.1248 (10) | |
N4 | 0.9096 (2) | 0.42640 (11) | 0.2347 (2) | 0.0634 (6) | |
C18 | 0.8601 (4) | 0.45922 (17) | 0.3077 (4) | 0.0946 (11) | |
H18 | 0.8520 | 0.5046 | 0.2964 | 0.113* | |
C19 | 0.9457 (3) | 0.45852 (16) | 0.1364 (3) | 0.0827 (9) | |
H19A | 0.9369 | 0.5053 | 0.1420 | 0.124* | |
H19B | 0.8815 | 0.4438 | 0.0448 | 0.124* | |
H19C | 1.0426 | 0.4477 | 0.1574 | 0.124* | |
C20 | 0.9206 (3) | 0.35570 (14) | 0.2455 (3) | 0.0785 (8) | |
H20A | 0.9153 | 0.3418 | 0.3269 | 0.118* | |
H20B | 1.0106 | 0.3420 | 0.2511 | 0.118* | |
H20C | 0.8432 | 0.3363 | 0.1656 | 0.118* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Pd1 | 0.04047 (13) | 0.04106 (13) | 0.04411 (14) | 0.00056 (10) | 0.02740 (11) | 0.00044 (11) |
S1 | 0.0737 (4) | 0.0436 (3) | 0.0685 (4) | −0.0004 (3) | 0.0537 (4) | 0.0015 (3) |
S2 | 0.0807 (4) | 0.0410 (3) | 0.0797 (5) | −0.0021 (3) | 0.0569 (4) | −0.0023 (3) |
N1 | 0.0705 (13) | 0.0540 (12) | 0.0608 (13) | −0.0030 (10) | 0.0477 (11) | −0.0044 (10) |
N2 | 0.0469 (10) | 0.0428 (10) | 0.0467 (10) | 0.0017 (7) | 0.0301 (9) | −0.0002 (8) |
N3 | 0.0503 (10) | 0.0407 (9) | 0.0511 (11) | 0.0002 (8) | 0.0325 (9) | −0.0031 (8) |
C1 | 0.0656 (15) | 0.0462 (12) | 0.0603 (15) | −0.0024 (11) | 0.0434 (13) | 0.0003 (11) |
C2 | 0.0495 (12) | 0.0444 (12) | 0.0480 (13) | 0.0014 (10) | 0.0314 (11) | 0.0026 (10) |
C3 | 0.0426 (11) | 0.0470 (12) | 0.0466 (12) | 0.0015 (10) | 0.0257 (10) | 0.0046 (10) |
C4 | 0.0573 (14) | 0.0507 (13) | 0.0664 (16) | 0.0053 (11) | 0.0374 (13) | 0.0056 (12) |
C5 | 0.0681 (17) | 0.0505 (14) | 0.089 (2) | 0.0026 (12) | 0.0431 (16) | 0.0135 (14) |
C6 | 0.0660 (17) | 0.0691 (17) | 0.082 (2) | −0.0025 (13) | 0.0426 (16) | 0.0267 (15) |
C7 | 0.0599 (15) | 0.0741 (17) | 0.0586 (16) | −0.0024 (13) | 0.0394 (13) | 0.0115 (13) |
C8 | 0.0475 (12) | 0.0546 (13) | 0.0490 (13) | −0.0030 (10) | 0.0287 (11) | 0.0032 (11) |
C9 | 0.0513 (13) | 0.0404 (11) | 0.0528 (14) | 0.0030 (10) | 0.0323 (12) | 0.0018 (10) |
C10 | 0.0432 (11) | 0.0430 (11) | 0.0487 (13) | −0.0026 (9) | 0.0278 (11) | −0.0040 (10) |
C11 | 0.0702 (16) | 0.0537 (14) | 0.0667 (16) | −0.0089 (12) | 0.0440 (14) | −0.0186 (12) |
C12 | 0.0610 (15) | 0.0404 (11) | 0.0645 (16) | 0.0026 (10) | 0.0389 (14) | −0.0099 (11) |
C13 | 0.0680 (17) | 0.0654 (16) | 0.0694 (17) | 0.0005 (13) | 0.0409 (15) | −0.0041 (14) |
C14 | 0.076 (2) | 0.082 (2) | 0.101 (3) | 0.0005 (17) | 0.059 (2) | 0.0081 (19) |
C15 | 0.0625 (19) | 0.082 (2) | 0.122 (3) | 0.0053 (16) | 0.050 (2) | 0.009 (2) |
C16 | 0.0637 (19) | 0.095 (2) | 0.089 (2) | 0.0093 (17) | 0.0210 (18) | −0.0057 (19) |
C17 | 0.0734 (19) | 0.0774 (18) | 0.0687 (19) | 0.0053 (15) | 0.0393 (17) | −0.0040 (15) |
O1 | 0.202 (3) | 0.120 (2) | 0.1058 (19) | 0.0498 (19) | 0.116 (2) | 0.0098 (16) |
N4 | 0.0643 (13) | 0.0729 (14) | 0.0570 (13) | 0.0028 (11) | 0.0315 (12) | −0.0111 (11) |
C18 | 0.136 (3) | 0.080 (2) | 0.086 (2) | 0.026 (2) | 0.067 (2) | −0.0029 (19) |
C19 | 0.079 (2) | 0.095 (2) | 0.083 (2) | −0.0068 (17) | 0.0451 (19) | −0.0070 (18) |
C20 | 0.090 (2) | 0.0727 (19) | 0.073 (2) | 0.0108 (16) | 0.0386 (18) | −0.0092 (16) |
Pd1—N2i | 2.0252 (18) | C9—H9 | 0.9300 |
Pd1—N2 | 2.0252 (18) | C11—C12 | 1.505 (3) |
Pd1—S1 | 2.2969 (10) | C11—H11A | 0.9700 |
Pd1—S1i | 2.2969 (10) | C11—H11B | 0.9700 |
S1—C10 | 1.735 (2) | C12—C17 | 1.369 (4) |
S2—C10 | 1.755 (2) | C12—C13 | 1.384 (3) |
S2—C11 | 1.810 (2) | C13—C14 | 1.376 (4) |
N1—C1 | 1.342 (3) | C13—H13 | 0.9300 |
N1—C8 | 1.375 (3) | C14—C15 | 1.349 (4) |
N1—H1N | 0.840 (16) | C14—H14 | 0.9300 |
N2—C9 | 1.305 (3) | C15—C16 | 1.368 (4) |
N2—N3 | 1.407 (2) | C15—H15 | 0.9300 |
N3—C10 | 1.285 (3) | C16—C17 | 1.391 (4) |
C1—C2 | 1.387 (3) | C16—H16 | 0.9300 |
C1—H1 | 0.9300 | C17—H17 | 0.9300 |
C2—C9 | 1.417 (3) | O1—C18 | 1.218 (4) |
C2—C3 | 1.451 (3) | N4—C18 | 1.317 (4) |
C3—C4 | 1.395 (3) | N4—C20 | 1.442 (3) |
C3—C8 | 1.401 (3) | N4—C19 | 1.449 (4) |
C4—C5 | 1.375 (3) | C18—H18 | 0.9300 |
C4—H4 | 0.9300 | C19—H19A | 0.9600 |
C5—C6 | 1.398 (4) | C19—H19B | 0.9600 |
C5—H5 | 0.9300 | C19—H19C | 0.9600 |
C6—C7 | 1.362 (4) | C20—H20A | 0.9600 |
C6—H6 | 0.9300 | C20—H20B | 0.9600 |
C7—C8 | 1.394 (3) | C20—H20C | 0.9600 |
C7—H7 | 0.9300 | ||
N2i—Pd1—N2 | 179.999 (1) | S1—C10—S2 | 112.47 (12) |
N2i—Pd1—S1 | 97.17 (5) | C12—C11—S2 | 118.18 (19) |
N2—Pd1—S1 | 82.83 (5) | C12—C11—H11A | 107.8 |
N2i—Pd1—S1i | 82.83 (5) | S2—C11—H11A | 107.8 |
N2—Pd1—S1i | 97.17 (5) | C12—C11—H11B | 107.8 |
S1—Pd1—S1i | 180.0 | S2—C11—H11B | 107.8 |
C10—S1—Pd1 | 96.04 (7) | H11A—C11—H11B | 107.1 |
C10—S2—C11 | 104.82 (11) | C17—C12—C13 | 118.0 (2) |
C1—N1—C8 | 109.95 (19) | C17—C12—C11 | 124.2 (2) |
C1—N1—H1N | 123.9 (19) | C13—C12—C11 | 117.8 (2) |
C8—N1—H1N | 125.9 (19) | C14—C13—C12 | 121.4 (3) |
C9—N2—N3 | 114.08 (17) | C14—C13—H13 | 119.3 |
C9—N2—Pd1 | 124.40 (15) | C12—C13—H13 | 119.3 |
N3—N2—Pd1 | 121.50 (12) | C15—C14—C13 | 120.2 (3) |
C10—N3—N2 | 113.06 (17) | C15—C14—H14 | 119.9 |
N1—C1—C2 | 110.0 (2) | C13—C14—H14 | 119.9 |
N1—C1—H1 | 125.0 | C14—C15—C16 | 119.6 (3) |
C2—C1—H1 | 125.0 | C14—C15—H15 | 120.2 |
C1—C2—C9 | 131.1 (2) | C16—C15—H15 | 120.2 |
C1—C2—C3 | 105.77 (19) | C15—C16—C17 | 120.6 (3) |
C9—C2—C3 | 123.12 (19) | C15—C16—H16 | 119.7 |
C4—C3—C8 | 118.8 (2) | C17—C16—H16 | 119.7 |
C4—C3—C2 | 134.7 (2) | C12—C17—C16 | 120.2 (3) |
C8—C3—C2 | 106.49 (18) | C12—C17—H17 | 119.9 |
C5—C4—C3 | 118.9 (2) | C16—C17—H17 | 119.9 |
C5—C4—H4 | 120.5 | C18—N4—C20 | 119.6 (3) |
C3—C4—H4 | 120.5 | C18—N4—C19 | 122.2 (3) |
C4—C5—C6 | 121.1 (2) | C20—N4—C19 | 118.1 (2) |
C4—C5—H5 | 119.5 | O1—C18—N4 | 125.4 (3) |
C6—C5—H5 | 119.5 | O1—C18—H18 | 117.3 |
C7—C6—C5 | 121.4 (2) | N4—C18—H18 | 117.3 |
C7—C6—H6 | 119.3 | N4—C19—H19A | 109.5 |
C5—C6—H6 | 119.3 | N4—C19—H19B | 109.5 |
C6—C7—C8 | 117.5 (2) | H19A—C19—H19B | 109.5 |
C6—C7—H7 | 121.2 | N4—C19—H19C | 109.5 |
C8—C7—H7 | 121.2 | H19A—C19—H19C | 109.5 |
N1—C8—C7 | 129.9 (2) | H19B—C19—H19C | 109.5 |
N1—C8—C3 | 107.81 (18) | N4—C20—H20A | 109.5 |
C7—C8—C3 | 122.3 (2) | N4—C20—H20B | 109.5 |
N2—C9—C2 | 131.1 (2) | H20A—C20—H20B | 109.5 |
N2—C9—H9 | 114.4 | N4—C20—H20C | 109.5 |
C2—C9—H9 | 114.4 | H20A—C20—H20C | 109.5 |
N3—C10—S1 | 126.36 (16) | H20B—C20—H20C | 109.5 |
N3—C10—S2 | 121.17 (16) |
Symmetry code: (i) −x+1, −y+1, −z+2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O1 | 0.84 (2) | 1.91 (2) | 2.749 (3) | 174 (3) |
C1—H1···N3 | 0.93 | 2.40 | 2.869 (3) | 111 |
C17—H17···S2 | 0.93 | 2.79 | 3.183 (3) | 107 |
C20—H20A···O1 | 0.96 | 2.36 | 2.747 (3) | 104 |
C9—H9···S1i | 0.93 | 2.60 | 3.279 (2) | 130 |
Symmetry code: (i) −x+1, −y+1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | [Pd(C17H14N3S2)2]·2C3H7NO |
Mr | 901.46 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 296 |
a, b, c (Å) | 10.509 (4), 20.320 (7), 10.925 (4) |
β (°) | 117.577 (5) |
V (Å3) | 2067.8 (12) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.70 |
Crystal size (mm) | 0.30 × 0.15 × 0.03 |
Data collection | |
Diffractometer | Bruker APEXII CCD |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.818, 0.979 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11353, 4486, 3411 |
Rint | 0.024 |
(sin θ/λ)max (Å−1) | 0.639 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.030, 0.074, 1.02 |
No. of reflections | 4486 |
No. of parameters | 255 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.27, −0.31 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), SHELXL97 and publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O1 | 0.840 (16) | 1.912 (17) | 2.749 (3) | 174 (3) |
C1—H1···N3 | 0.93 | 2.40 | 2.869 (3) | 111.4 |
C17—H17···S2 | 0.93 | 2.79 | 3.183 (3) | 106.8 |
C20—H20A···O1 | 0.96 | 2.36 | 2.747 (3) | 103.6 |
C9—H9···S1i | 0.93 | 2.60 | 3.279 (2) | 129.9 |
Symmetry code: (i) −x+1, −y+1, −z+2. |
Acknowledgements
The authors thank University of Malaya for funding this study (UMRG grant RG024/09BIO).
References
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The title compound is isostructural with the CuII complex of the Schiff base ligand (Khaledi et al., 2009). The palladium(II) ion is four-coordinated by two azomethine nitrogen and two thioamide sulfur atoms in a trans-square planar geometry. It has been suggested that the square planar geometry of the Schiff bases of S-alkyldithiocarbazate is trans when they are derived from aldehydes, whereas the ketone derivatives show cis geometry (Ali et al., 2002). Similar to the analogous CuII complex, the indole amino groups in the present structure are hydrogen bonded to the co-crystallized DMF molecules. Moreover, non-classical hydrogen bonds, C—H···N, C—H···O and C—H···S, are observed in the structure.