organic compounds
3-(2-Fluorophenoxy)propanoic acid
aKey Laboratory of Nuclear Medicine, Ministry of Health, Jiangsu Key Laboratory of Molecular Nuclear Medicine, Jiangsu Institute of Nuclear Medicine, Wuxi 214063, People's Republic of China
*Correspondence e-mail: rambo1265@sina.com
In the title compound, C9H9FO3, the dihedral angle between the carboxyl group and the benzene ring is 79.4 (3)°. In the crystal, molecules form centrosymmetric dimers through pairs of classical O—H⋯O hydrogen bonds. These are further linked by weaker C—H⋯O interactions, forming a three-dimensional network.
Related literature
For a related structure, see: Potrzebowski & Chruszcz (2007). For the synthesis, see: Bäurle et al. (2006).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku, 2008); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536810049974/sj5066sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810049974/sj5066Isup2.hkl
The title compound was crystallized from dichloromethane and hexane (1:1); colorless block-shaped crystals were obtained after several days.
The crystals were not of good quality resulting in uncertainties in
dimensions and other metrical data being somewhat higher than normal. Positional parameters of all the H atoms bonded to C atoms were calculated geometrically and were allowed to ride on the C atoms to which they were bonded, with C—H distances of 0.95Å (CH), 0.99Å (CH2), and with Uiso(H) =1.2Ueq of the parent atoms. The H-atom of the OH group was located in a difference map and allowed to refine freely with an isotropic displacement parameter.The title compound,(I), is an important intermediate in the synthesis of 8-fluorochroman-4-one (Bäurle et al., 2006). We report herein its structure (Fig.1).
The bond lengths and angles in (I) are within normal ranges (Potrzebowski & Chruszcz, 2007). The dihedral angle between the C1—C6 benzene ring and the C9/O2/O3 plane is 79.4 (3) °. In the crystal, molecules form centrosymmetric dimers through classical O3—H4O···O2 hydrogen bonds (Table 1). These are further linked by weaker C4—H4···O1 contacts forming a three-dimensional network.
For a related structure, see: Potrzebowski & Chruszcz (2007). For the synthesis, see: Bäurle et al. (2006).
Data collection: CrystalClear (Rigaku, 2008); cell
CrystalClear (Rigaku, 2008); data reduction: CrystalClear (Rigaku, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. A view of the title compound with the atomic numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. |
C9H9FO3 | F(000) = 384 |
Mr = 184.16 | Dx = 1.439 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 2182 reflections |
a = 13.934 (16) Å | θ = 3.1–27.5° |
b = 4.974 (5) Å | µ = 0.12 mm−1 |
c = 13.098 (14) Å | T = 153 K |
β = 110.546 (12)° | Block, colorless |
V = 850.0 (16) Å3 | 0.45 × 0.30 × 0.08 mm |
Z = 4 |
Rigaku AFC10/Saturn724+ diffractometer | 1518 independent reflections |
Radiation source: Rotating Anode | 1034 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.070 |
Detector resolution: 28.5714 pixels mm-1 | θmax = 25.5°, θmin = 3.1° |
φ and ω scans | h = −16→16 |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2008) | k = −6→6 |
Tmin = 0.947, Tmax = 0.990 | l = −15→15 |
5881 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.080 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.189 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.98 | w = 1/[σ2(Fo2) + (0.0106P)2 + 5.690P] where P = (Fo2 + 2Fc2)/3 |
1518 reflections | (Δ/σ)max < 0.001 |
122 parameters | Δρmax = 0.42 e Å−3 |
0 restraints | Δρmin = −0.38 e Å−3 |
C9H9FO3 | V = 850.0 (16) Å3 |
Mr = 184.16 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 13.934 (16) Å | µ = 0.12 mm−1 |
b = 4.974 (5) Å | T = 153 K |
c = 13.098 (14) Å | 0.45 × 0.30 × 0.08 mm |
β = 110.546 (12)° |
Rigaku AFC10/Saturn724+ diffractometer | 1518 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2008) | 1034 reflections with I > 2σ(I) |
Tmin = 0.947, Tmax = 0.990 | Rint = 0.070 |
5881 measured reflections |
R[F2 > 2σ(F2)] = 0.080 | 0 restraints |
wR(F2) = 0.189 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.98 | Δρmax = 0.42 e Å−3 |
1518 reflections | Δρmin = −0.38 e Å−3 |
122 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
F1 | 0.1148 (2) | 0.0797 (6) | 0.0408 (2) | 0.0401 (7) | |
O1 | 0.2551 (2) | 0.4195 (6) | 0.1573 (2) | 0.0279 (7) | |
O2 | 0.4656 (2) | 0.4357 (6) | 0.1091 (3) | 0.0358 (8) | |
O3 | 0.4220 (2) | 0.7887 (6) | −0.0035 (3) | 0.0350 (8) | |
C8 | 0.3591 (3) | 0.7823 (8) | 0.1414 (4) | 0.0279 (10) | |
H8A | 0.2946 | 0.8508 | 0.0873 | 0.034* | |
H8B | 0.3981 | 0.9392 | 0.1815 | 0.034* | |
C6 | 0.2124 (3) | 0.2528 (8) | 0.2131 (4) | 0.0239 (9) | |
C5 | 0.2368 (3) | 0.2465 (8) | 0.3253 (3) | 0.0264 (9) | |
H5 | 0.2869 | 0.3663 | 0.3705 | 0.032* | |
C1 | 0.1372 (3) | 0.0743 (9) | 0.1491 (4) | 0.0281 (10) | |
C3 | 0.1149 (3) | −0.1099 (9) | 0.3076 (4) | 0.0339 (11) | |
H3 | 0.0820 | −0.2334 | 0.3399 | 0.041* | |
C9 | 0.4201 (3) | 0.6507 (8) | 0.0816 (4) | 0.0279 (10) | |
C7 | 0.3327 (3) | 0.6037 (8) | 0.2214 (4) | 0.0288 (10) | |
H7A | 0.3941 | 0.5042 | 0.2677 | 0.035* | |
H7B | 0.3064 | 0.7129 | 0.2691 | 0.035* | |
C4 | 0.1878 (3) | 0.0641 (9) | 0.3721 (4) | 0.0301 (10) | |
H4 | 0.2050 | 0.0603 | 0.4490 | 0.036* | |
C2 | 0.0898 (3) | −0.1050 (9) | 0.1967 (4) | 0.0304 (10) | |
H2 | 0.0395 | −0.2255 | 0.1523 | 0.036* | |
H4O | 0.462 (5) | 0.712 (14) | −0.037 (5) | 0.08 (2)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1 | 0.0365 (15) | 0.0424 (16) | 0.0402 (16) | −0.0105 (12) | 0.0121 (12) | 0.0004 (13) |
O1 | 0.0313 (15) | 0.0225 (15) | 0.0344 (17) | −0.0050 (12) | 0.0170 (13) | 0.0010 (13) |
O2 | 0.0391 (18) | 0.0272 (16) | 0.052 (2) | 0.0124 (14) | 0.0289 (16) | 0.0122 (15) |
O3 | 0.0405 (18) | 0.0250 (16) | 0.050 (2) | 0.0084 (14) | 0.0291 (16) | 0.0076 (15) |
C8 | 0.029 (2) | 0.0163 (19) | 0.044 (3) | −0.0018 (17) | 0.0197 (19) | −0.0018 (18) |
C6 | 0.024 (2) | 0.0166 (19) | 0.036 (2) | 0.0033 (15) | 0.0168 (17) | 0.0019 (17) |
C5 | 0.032 (2) | 0.019 (2) | 0.030 (2) | 0.0035 (16) | 0.0134 (18) | −0.0005 (17) |
C1 | 0.024 (2) | 0.025 (2) | 0.037 (3) | 0.0029 (17) | 0.0131 (18) | 0.0024 (19) |
C3 | 0.033 (2) | 0.025 (2) | 0.057 (3) | 0.0042 (18) | 0.031 (2) | 0.009 (2) |
C9 | 0.027 (2) | 0.020 (2) | 0.041 (3) | −0.0025 (17) | 0.0175 (19) | 0.0010 (19) |
C7 | 0.034 (2) | 0.017 (2) | 0.043 (3) | 0.0003 (17) | 0.023 (2) | −0.0049 (19) |
C4 | 0.033 (2) | 0.026 (2) | 0.035 (2) | 0.0088 (18) | 0.0168 (19) | 0.0066 (19) |
C2 | 0.022 (2) | 0.025 (2) | 0.045 (3) | 0.0006 (17) | 0.0131 (19) | 0.006 (2) |
F1—C1 | 1.342 (5) | C6—C1 | 1.405 (6) |
O1—C6 | 1.372 (5) | C5—C4 | 1.399 (6) |
O1—C7 | 1.441 (5) | C5—H5 | 0.9500 |
O2—C9 | 1.231 (5) | C1—C2 | 1.381 (6) |
O3—C9 | 1.317 (5) | C3—C2 | 1.370 (7) |
O3—H4O | 0.90 (7) | C3—C4 | 1.376 (7) |
C8—C9 | 1.494 (6) | C3—H3 | 0.9500 |
C8—C7 | 1.515 (6) | C7—H7A | 0.9900 |
C8—H8A | 0.9900 | C7—H7B | 0.9900 |
C8—H8B | 0.9900 | C4—H4 | 0.9500 |
C6—C5 | 1.387 (6) | C2—H2 | 0.9500 |
C6—O1—C7 | 116.8 (3) | C2—C3—H3 | 120.0 |
C9—O3—H4O | 113 (4) | C4—C3—H3 | 120.0 |
C9—C8—C7 | 115.3 (3) | O2—C9—O3 | 122.7 (4) |
C9—C8—H8A | 108.4 | O2—C9—C8 | 123.8 (4) |
C7—C8—H8A | 108.4 | O3—C9—C8 | 113.5 (4) |
C9—C8—H8B | 108.4 | O1—C7—C8 | 106.5 (4) |
C7—C8—H8B | 108.4 | O1—C7—H7A | 110.4 |
H8A—C8—H8B | 107.5 | C8—C7—H7A | 110.4 |
O1—C6—C5 | 126.0 (4) | O1—C7—H7B | 110.4 |
O1—C6—C1 | 115.9 (4) | C8—C7—H7B | 110.4 |
C5—C6—C1 | 118.2 (4) | H7A—C7—H7B | 108.6 |
C6—C5—C4 | 120.2 (4) | C3—C4—C5 | 120.5 (4) |
C6—C5—H5 | 119.9 | C3—C4—H4 | 119.8 |
C4—C5—H5 | 119.9 | C5—C4—H4 | 119.8 |
F1—C1—C2 | 121.3 (4) | C3—C2—C1 | 120.3 (4) |
F1—C1—C6 | 117.8 (4) | C3—C2—H2 | 119.8 |
C2—C1—C6 | 120.9 (4) | C1—C2—H2 | 119.8 |
C2—C3—C4 | 119.9 (4) | ||
C7—O1—C6—C5 | 0.3 (6) | C7—C8—C9—O3 | 165.5 (4) |
C7—O1—C6—C1 | −179.8 (3) | C6—O1—C7—C8 | −174.2 (3) |
O1—C6—C5—C4 | −179.4 (4) | C9—C8—C7—O1 | −72.7 (5) |
C1—C6—C5—C4 | 0.7 (6) | C2—C3—C4—C5 | −0.1 (6) |
O1—C6—C1—F1 | 0.8 (5) | C6—C5—C4—C3 | −0.2 (6) |
C5—C6—C1—F1 | −179.3 (3) | C4—C3—C2—C1 | −0.1 (6) |
O1—C6—C1—C2 | 179.2 (4) | F1—C1—C2—C3 | 179.0 (4) |
C5—C6—C1—C2 | −0.9 (6) | C6—C1—C2—C3 | 0.6 (6) |
C7—C8—C9—O2 | −15.4 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H4O···O2i | 0.91 (7) | 1.77 (7) | 2.671 (6) | 177 (7) |
C4—H4···O1 | 0.95 | 2.57 | 3.519 (7) | 176 |
Symmetry code: (i) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | C9H9FO3 |
Mr | 184.16 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 153 |
a, b, c (Å) | 13.934 (16), 4.974 (5), 13.098 (14) |
β (°) | 110.546 (12) |
V (Å3) | 850.0 (16) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.45 × 0.30 × 0.08 |
Data collection | |
Diffractometer | Rigaku AFC10/Saturn724+ |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2008) |
Tmin, Tmax | 0.947, 0.990 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5881, 1518, 1034 |
Rint | 0.070 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.080, 0.189, 0.98 |
No. of reflections | 1518 |
No. of parameters | 122 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.42, −0.38 |
Computer programs: CrystalClear (Rigaku, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H4O···O2i | 0.91 (7) | 1.77 (7) | 2.671 (6) | 177 (7) |
C4—H4···O1 | 0.95 | 2.57 | 3.519 (7) | 176 |
Symmetry code: (i) −x+1, −y+1, −z. |
Acknowledgements
This work was supported financially by the Key Medical Talents Program of Jiangsu Province (No. RC2007097).
References
Bäurle, S., Berger, M. & Jaroch, S. (2006). WO Patent 2006/027236. Google Scholar
Potrzebowski, W. & Chruszcz, M. (2007). Acta Cryst. E63, o2754. Web of Science CSD CrossRef IUCr Journals Google Scholar
Rigaku (2008). CrystalClear. Rigaku Corporation, Tokyo, Japan. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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The title compound,(I), is an important intermediate in the synthesis of 8-fluorochroman-4-one (Bäurle et al., 2006). We report herein its structure (Fig.1).
The bond lengths and angles in (I) are within normal ranges (Potrzebowski & Chruszcz, 2007). The dihedral angle between the C1—C6 benzene ring and the C9/O2/O3 plane is 79.4 (3) °. In the crystal, molecules form centrosymmetric dimers through classical O3—H4O···O2 hydrogen bonds (Table 1). These are further linked by weaker C4—H4···O1 contacts forming a three-dimensional network.