metal-organic compounds
[Malonato(2−)-κ2O,O′]bis(1,10-phenanthroline-κ2N,N′)zinc(II) pentahydrate
aDepartment of Chemistry and Science of Life, Quanzhou Normal University, Fujian 362000, People's Republic of China
*Correspondence e-mail: 15060805088@163.com
In the title complex, [Zn(C3H2O4)(C12H8N2)2]·5H2O, the ZnII cation displays a distorted octahedral geometry, being coordinated by four N atoms from two 1,10-phenanthroline ligands and two O atoms from different carboxylate groups of the chelating malonate dianion. In the crystal, the complexes are linked into a three-dimensional supramolecular network by both O—H⋯O hydrogen-bonding interactions between water molecules and the uncoordinated carboxylate O atoms of neighboring molecules, and aromatic π–π stacking interactions between neighboring phenanthroline rings with centroid–centroid distances of 3.4654 (17) and 3.697 (2) Å.
Related literature
For zinc-aliphatic dicarboxylate complexes with 1,10-phenanthroline as co-ligand, see: Fu et al. (2006); Kuang et al. (2007); Liu et al. (2004); Yang et al. (2007); Zhang et al. (2005); Zheng et al. (2002). For Zn—O and Zn—N bond lengths, see: Guilera & Steed (1999); Tao et al. (2000).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2000); cell SAINT-Plus (Bruker, 2000); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
https://doi.org/10.1107/S1600536810049573/vm2055sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S1600536810049573/vm2055Isup2.hkl
An ethanol solution (10 ml) of 1,10-phenanthroline (0.397 g, 2 mmol), an aqueous solution (10 ml) of Zn(NO3)2.6H2O (0.297 g, 1 mmol) and an aqueous solution (10 ml) of malonic acid (0.104 g, 1 mmol) were mixed. After refluxing for 4 h, the hot mixture was filtered off. The colorless single crystals suitable for X-ray analysis were obtained by slow evaporation of the filtrate at room temperature after 7 days.
H atoms bonded to C were placed geometrically and treated as riding, (C—H = 0.93–0.97 Å), with Uiso(H) = 1.2Ueq(C). The water H atoms found from Fourier difference maps were refined with restraints for O—H distances (0.8500 Å) and and Uiso(H) = 1.5Ueq(O).
Recently, there have been a number of reports on zinc-aliphatic dicarboxylate complexes with 1,10-phenanthroline (phen) as co-ligand (Fu et al. 2006; Kuang et al.,2007; Yang et al., 2007; Zheng et al., 2002; Liu et al., 2004; Zhang et al.,2005). In order to continue this research, we have synthesized the title complex [Zn(C3H2O4)(C12H8N2)2].5H2O and have characterized it by elemental analysis and single-crystal X-ray diffraction analysis.
The ZnII cation has a slightly distorted octahedral geometry and is coordinated by four N atoms from two phen ligands and two O atoms from different carboxylate groups of the chelating malonate dianion. The equatorial plane is defined by atoms N1,N2,N3,O2; the apical positions being occupied by N4 and O4. The Zn—O (2.0203–2.0687 (17) Å) and Zn—N (2.141–2.176 (2) Å) bond lengths are in the normal ranges (Guilera et al.,1999; Tao, et al., 2000).
The crystal packing is stabilized by intermolecular π-π interactions between the phenyl rings [for example Cg(5)···Cg(8)a = 3.4654 (17) Å, Cg(7)···Cg(7)b = 3.697 (2) Å, with Cg(5) the centroid of ring N2/C7—C11, Cg(8) of ring C4—C12, Cg(7) of ring N4/C13-C16/C24, symmetry codes: (a) 1 - x,-y, 1 - z, (b) 1 - x,-y, 2 - z], and O—H···O hydrogen bonds (Table 1, Fig. 2).
For zinc-aliphatic dicarboxylate complexes with 1,10-phenanthroline as co-ligand, see: Fu et al. (2006); Kuang et al. (2007); Liu et al. (2004); Yang et al. (2007); Zhang et al. (2005); Zheng et al. (2002). For Zn—O and Zn—N bond lengths, see: Guilera & Steed (1999); Tao et al. (2000).
Data collection: SMART (Bruker, 2000); cell
SAINT-Plus (Bruker, 2000); data reduction: SAINT-Plus (Bruker, 2000); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The ORTEP drawing of the title compound (I). Displacement ellipsoids are drawn at 30% probability level. All hydrogen atoms have been omitted for reasons of clarity. | |
Fig. 2. Crystal packing of (I) along bc plane showing H-bonding (yellow dashed lines) and π-π stacking interactions (pink dashed lines). |
[Zn(C3H2O4)(C12H8N2)2]·5H2O | Z = 2 |
Mr = 617.90 | F(000) = 640 |
Triclinic, P1 | Dx = 1.538 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 10.3802 (15) Å | Cell parameters from 6521 reflections |
b = 10.580 (3) Å | θ = 2.5–28.0° |
c = 13.059 (2) Å | µ = 0.98 mm−1 |
α = 84.682 (2)° | T = 291 K |
β = 76.965 (3)° | Bolck, colorless |
γ = 72.834 (2)° | 0.26 × 0.20 × 0.18 mm |
V = 1334.5 (4) Å3 |
Bruker SMART APEX CCD diffractometer | 5236 independent reflections |
Radiation source: sealed tube | 4851 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.045 |
phi and ω scans | θmax = 26.0°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −12→12 |
Tmin = 0.784, Tmax = 0.843 | k = −13→13 |
13993 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.097 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.05P)2 + 1.22P] where P = (Fo2 + 2Fc2)/3 |
5236 reflections | (Δ/σ)max < 0.001 |
370 parameters | Δρmax = 0.32 e Å−3 |
0 restraints | Δρmin = −0.80 e Å−3 |
[Zn(C3H2O4)(C12H8N2)2]·5H2O | γ = 72.834 (2)° |
Mr = 617.90 | V = 1334.5 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 10.3802 (15) Å | Mo Kα radiation |
b = 10.580 (3) Å | µ = 0.98 mm−1 |
c = 13.059 (2) Å | T = 291 K |
α = 84.682 (2)° | 0.26 × 0.20 × 0.18 mm |
β = 76.965 (3)° |
Bruker SMART APEX CCD diffractometer | 5236 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | 4851 reflections with I > 2σ(I) |
Tmin = 0.784, Tmax = 0.843 | Rint = 0.045 |
13993 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | 0 restraints |
wR(F2) = 0.097 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.32 e Å−3 |
5236 reflections | Δρmin = −0.80 e Å−3 |
370 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.8893 (3) | −0.0210 (3) | 0.6477 (2) | 0.0372 (6) | |
H1A | 0.9374 | 0.0280 | 0.6714 | 0.045* | |
C2 | 0.9626 (3) | −0.1418 (3) | 0.5995 (3) | 0.0445 (8) | |
H2A | 1.0580 | −0.1720 | 0.5906 | 0.053* | |
C3 | 0.8934 (3) | −0.2128 (3) | 0.5667 (3) | 0.0449 (8) | |
H3A | 0.9417 | −0.2926 | 0.5343 | 0.054* | |
C4 | 0.7496 (3) | −0.1694 (2) | 0.5801 (2) | 0.0316 (6) | |
C5 | 0.6684 (4) | −0.2373 (3) | 0.5447 (2) | 0.0427 (8) | |
H5A | 0.7120 | −0.3134 | 0.5062 | 0.051* | |
C6 | 0.5299 (4) | −0.1932 (3) | 0.5660 (2) | 0.0384 (7) | |
H6A | 0.4798 | −0.2431 | 0.5461 | 0.046* | |
C7 | 0.4589 (3) | −0.0738 (3) | 0.61756 (19) | 0.0291 (6) | |
C8 | 0.3162 (3) | −0.0214 (3) | 0.6421 (2) | 0.0396 (7) | |
H8A | 0.2604 | −0.0678 | 0.6259 | 0.048* | |
C9 | 0.2576 (3) | 0.0969 (3) | 0.6895 (2) | 0.0379 (7) | |
H9A | 0.1622 | 0.1309 | 0.7064 | 0.045* | |
C10 | 0.3413 (3) | 0.1664 (3) | 0.7123 (2) | 0.0321 (6) | |
H10A | 0.3002 | 0.2489 | 0.7422 | 0.038* | |
C11 | 0.5355 (3) | 0.0041 (2) | 0.64652 (17) | 0.0228 (5) | |
C12 | 0.6836 (3) | −0.0471 (2) | 0.62902 (19) | 0.0268 (5) | |
C13 | 0.6790 (3) | 0.0354 (3) | 0.9213 (2) | 0.0289 (5) | |
H13A | 0.7381 | −0.0279 | 0.8743 | 0.035* | |
C14 | 0.6684 (3) | 0.0069 (3) | 1.0273 (2) | 0.0302 (6) | |
H14A | 0.7184 | −0.0742 | 1.0514 | 0.036* | |
C15 | 0.5817 (3) | 0.1018 (3) | 1.0975 (2) | 0.0349 (6) | |
H15A | 0.5760 | 0.0869 | 1.1695 | 0.042* | |
C16 | 0.5016 (3) | 0.2219 (3) | 1.05814 (18) | 0.0266 (5) | |
C17 | 0.4076 (3) | 0.3224 (3) | 1.1248 (2) | 0.0366 (6) | |
H17A | 0.3955 | 0.3090 | 1.1974 | 0.044* | |
C18 | 0.3351 (3) | 0.4380 (3) | 1.0847 (2) | 0.0373 (6) | |
H18A | 0.2722 | 0.5014 | 1.1299 | 0.045* | |
C19 | 0.3548 (3) | 0.4622 (3) | 0.9741 (2) | 0.0281 (5) | |
C20 | 0.2867 (3) | 0.5812 (3) | 0.9265 (2) | 0.0352 (6) | |
H20A | 0.2241 | 0.6489 | 0.9678 | 0.042* | |
C21 | 0.3131 (3) | 0.5961 (3) | 0.8210 (2) | 0.0350 (6) | |
H21A | 0.2692 | 0.6745 | 0.7893 | 0.042* | |
C22 | 0.4062 (3) | 0.4940 (3) | 0.7592 (2) | 0.0288 (5) | |
H22A | 0.4223 | 0.5052 | 0.6864 | 0.035* | |
C23 | 0.4500 (2) | 0.3641 (2) | 0.90571 (18) | 0.0205 (5) | |
C24 | 0.5217 (2) | 0.2419 (2) | 0.94922 (18) | 0.0225 (5) | |
C25 | 0.7182 (2) | 0.3692 (3) | 0.5295 (2) | 0.0279 (5) | |
C26 | 0.7806 (3) | 0.4298 (3) | 0.5965 (2) | 0.0340 (6) | |
H26A | 0.7076 | 0.4980 | 0.6369 | 0.041* | |
H26B | 0.8433 | 0.4731 | 0.5507 | 0.041* | |
C27 | 0.8586 (3) | 0.3378 (2) | 0.6726 (2) | 0.0272 (5) | |
N1 | 0.7535 (2) | 0.0252 (2) | 0.66042 (16) | 0.0263 (4) | |
N2 | 0.4776 (2) | 0.1201 (2) | 0.69320 (15) | 0.0241 (4) | |
N3 | 0.4729 (2) | 0.3804 (2) | 0.80156 (15) | 0.0223 (4) | |
N4 | 0.6074 (2) | 0.1510 (2) | 0.88198 (15) | 0.0229 (4) | |
O1 | 0.9787 (2) | 0.3391 (2) | 0.67131 (18) | 0.0408 (5) | |
O2 | 0.79835 (18) | 0.26528 (18) | 0.73556 (15) | 0.0295 (4) | |
O3 | 0.7436 (2) | 0.3892 (2) | 0.43388 (16) | 0.0487 (6) | |
O4 | 0.6369 (2) | 0.30087 (19) | 0.57407 (13) | 0.0314 (4) | |
O1W | 0.9384 (2) | 0.16928 (19) | 0.88973 (17) | 0.0396 (5) | |
H1X | 0.8963 | 0.2004 | 0.8401 | 0.048* | |
H1Y | 0.8802 | 0.1636 | 0.9460 | 0.048* | |
O2W | 0.0797 (3) | 0.2733 (3) | 0.12852 (19) | 0.0545 (6) | |
H2X | 0.0151 | 0.3453 | 0.1366 | 0.065* | |
H2Y | 0.1286 | 0.2722 | 0.0667 | 0.065* | |
O3W | 0.0798 (2) | 0.5202 (2) | 0.73284 (17) | 0.0471 (5) | |
H3X | 0.0796 | 0.4957 | 0.6727 | 0.056* | |
H3Y | 0.1389 | 0.5629 | 0.7266 | 0.056* | |
O4W | 0.1087 (3) | 0.3290 (2) | 0.91176 (19) | 0.0523 (6) | |
H4X | 0.1009 | 0.3840 | 0.8602 | 0.063* | |
H4Y | 0.0423 | 0.2945 | 0.9240 | 0.063* | |
O5W | 1.0707 (2) | −0.1012 (2) | 0.8743 (2) | 0.0508 (6) | |
H5X | 1.0299 | −0.0188 | 0.8783 | 0.061* | |
H5Y | 1.0258 | −0.1433 | 0.9203 | 0.061* | |
Zn1 | 0.62469 (3) | 0.21697 (3) | 0.720044 (19) | 0.01839 (9) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0354 (15) | 0.0360 (15) | 0.0394 (16) | −0.0120 (12) | −0.0069 (12) | 0.0069 (12) |
C2 | 0.0302 (15) | 0.0357 (16) | 0.0507 (19) | 0.0058 (12) | 0.0034 (13) | 0.0042 (14) |
C3 | 0.0472 (18) | 0.0308 (15) | 0.0412 (17) | −0.0010 (13) | 0.0099 (14) | −0.0046 (12) |
C4 | 0.0503 (16) | 0.0192 (12) | 0.0188 (12) | −0.0034 (11) | −0.0040 (11) | 0.0031 (9) |
C5 | 0.083 (2) | 0.0234 (13) | 0.0221 (13) | −0.0156 (15) | −0.0127 (14) | 0.0061 (10) |
C6 | 0.077 (2) | 0.0307 (14) | 0.0188 (12) | −0.0303 (15) | −0.0168 (13) | 0.0102 (10) |
C7 | 0.0485 (16) | 0.0269 (13) | 0.0206 (12) | −0.0204 (12) | −0.0176 (11) | 0.0137 (10) |
C8 | 0.0504 (18) | 0.0525 (18) | 0.0298 (14) | −0.0336 (15) | −0.0190 (13) | 0.0195 (13) |
C9 | 0.0294 (14) | 0.0559 (19) | 0.0283 (14) | −0.0158 (13) | −0.0087 (11) | 0.0172 (13) |
C10 | 0.0282 (13) | 0.0441 (16) | 0.0210 (12) | −0.0111 (12) | −0.0045 (10) | 0.0145 (11) |
C11 | 0.0324 (13) | 0.0266 (12) | 0.0136 (11) | −0.0132 (10) | −0.0097 (9) | 0.0068 (9) |
C12 | 0.0384 (14) | 0.0242 (12) | 0.0170 (11) | −0.0093 (10) | −0.0065 (10) | 0.0071 (9) |
C13 | 0.0258 (12) | 0.0339 (14) | 0.0271 (13) | −0.0084 (11) | −0.0108 (10) | 0.0115 (10) |
C14 | 0.0349 (14) | 0.0361 (14) | 0.0249 (13) | −0.0172 (11) | −0.0133 (11) | 0.0143 (11) |
C15 | 0.0445 (16) | 0.0447 (16) | 0.0215 (13) | −0.0233 (13) | −0.0109 (11) | 0.0137 (11) |
C16 | 0.0360 (14) | 0.0366 (14) | 0.0126 (11) | −0.0192 (11) | −0.0053 (10) | 0.0024 (9) |
C17 | 0.0388 (15) | 0.0521 (18) | 0.0205 (13) | −0.0226 (14) | 0.0028 (11) | 0.0009 (12) |
C18 | 0.0362 (15) | 0.0514 (18) | 0.0255 (14) | −0.0190 (13) | 0.0031 (11) | −0.0096 (12) |
C19 | 0.0230 (12) | 0.0322 (13) | 0.0316 (14) | −0.0103 (10) | −0.0042 (10) | −0.0090 (11) |
C20 | 0.0300 (14) | 0.0326 (14) | 0.0407 (16) | −0.0055 (11) | −0.0020 (12) | −0.0141 (12) |
C21 | 0.0273 (13) | 0.0298 (14) | 0.0460 (17) | 0.0000 (11) | −0.0125 (12) | −0.0057 (12) |
C22 | 0.0221 (12) | 0.0271 (13) | 0.0361 (14) | 0.0009 (10) | −0.0151 (10) | 0.0016 (11) |
C23 | 0.0204 (11) | 0.0206 (11) | 0.0204 (11) | −0.0065 (9) | −0.0009 (9) | −0.0048 (9) |
C24 | 0.0243 (12) | 0.0290 (12) | 0.0168 (11) | −0.0092 (10) | −0.0076 (9) | 0.0005 (9) |
C25 | 0.0200 (11) | 0.0294 (13) | 0.0251 (13) | 0.0009 (10) | −0.0003 (9) | 0.0082 (10) |
C26 | 0.0308 (14) | 0.0235 (13) | 0.0468 (17) | −0.0074 (11) | −0.0114 (12) | 0.0097 (11) |
C27 | 0.0264 (13) | 0.0245 (12) | 0.0323 (14) | −0.0081 (10) | −0.0067 (10) | −0.0044 (10) |
N1 | 0.0288 (11) | 0.0261 (11) | 0.0213 (10) | −0.0063 (9) | −0.0011 (8) | −0.0016 (8) |
N2 | 0.0294 (11) | 0.0265 (10) | 0.0186 (10) | −0.0094 (9) | −0.0083 (8) | 0.0022 (8) |
N3 | 0.0238 (10) | 0.0236 (10) | 0.0188 (10) | −0.0035 (8) | −0.0090 (8) | 0.0031 (8) |
N4 | 0.0243 (10) | 0.0279 (11) | 0.0184 (10) | −0.0070 (8) | −0.0096 (8) | 0.0022 (8) |
O1 | 0.0347 (11) | 0.0441 (12) | 0.0501 (13) | −0.0188 (9) | −0.0134 (9) | 0.0028 (10) |
O2 | 0.0279 (9) | 0.0321 (10) | 0.0327 (10) | −0.0140 (8) | −0.0112 (8) | 0.0077 (8) |
O3 | 0.0364 (11) | 0.0706 (15) | 0.0292 (11) | −0.0089 (11) | −0.0051 (9) | 0.0235 (10) |
O4 | 0.0441 (11) | 0.0458 (11) | 0.0104 (8) | −0.0196 (9) | −0.0109 (7) | 0.0050 (7) |
O1W | 0.0443 (12) | 0.0335 (11) | 0.0426 (12) | −0.0116 (9) | −0.0145 (9) | 0.0064 (9) |
O2W | 0.0491 (14) | 0.0714 (17) | 0.0434 (13) | −0.0173 (12) | −0.0070 (11) | −0.0093 (12) |
O3W | 0.0569 (14) | 0.0598 (14) | 0.0345 (11) | −0.0361 (12) | −0.0054 (10) | 0.0036 (10) |
O4W | 0.0572 (14) | 0.0594 (15) | 0.0488 (14) | −0.0324 (12) | −0.0072 (11) | −0.0004 (11) |
O5W | 0.0500 (13) | 0.0340 (11) | 0.0665 (16) | −0.0121 (10) | −0.0082 (11) | −0.0007 (11) |
Zn1 | 0.02194 (15) | 0.02086 (15) | 0.01283 (14) | −0.00678 (10) | −0.00444 (10) | 0.00161 (9) |
C1—N1 | 1.326 (4) | C18—H18A | 0.9300 |
C1—C2 | 1.403 (4) | C19—C20 | 1.414 (4) |
C1—H1A | 0.9300 | C19—C23 | 1.422 (3) |
C2—C3 | 1.334 (5) | C20—C21 | 1.347 (4) |
C2—H2A | 0.9300 | C20—H20A | 0.9300 |
C3—C4 | 1.402 (4) | C21—C22 | 1.395 (4) |
C3—H3A | 0.9300 | C21—H21A | 0.9300 |
C4—C12 | 1.409 (4) | C22—N3 | 1.337 (3) |
C4—C5 | 1.426 (4) | C22—H22A | 0.9300 |
C5—C6 | 1.345 (5) | C23—N3 | 1.331 (3) |
C5—H5A | 0.9300 | C23—C24 | 1.427 (3) |
C6—C7 | 1.406 (4) | C24—N4 | 1.336 (3) |
C6—H6A | 0.9300 | C25—O3 | 1.228 (3) |
C7—C8 | 1.392 (4) | C25—O4 | 1.278 (3) |
C7—C11 | 1.427 (3) | C25—C26 | 1.483 (4) |
C8—C9 | 1.357 (5) | C26—C27 | 1.520 (4) |
C8—H8A | 0.9300 | C26—H26A | 0.9700 |
C9—C10 | 1.385 (4) | C26—H26B | 0.9700 |
C9—H9A | 0.9300 | C27—O1 | 1.247 (3) |
C10—N2 | 1.327 (3) | C27—O2 | 1.261 (3) |
C10—H10A | 0.9300 | N1—Zn1 | 2.175 (2) |
C11—N2 | 1.333 (3) | N2—Zn1 | 2.176 (2) |
C11—C12 | 1.444 (4) | N3—Zn1 | 2.141 (2) |
C12—N1 | 1.341 (3) | N4—Zn1 | 2.150 (2) |
C13—N4 | 1.353 (3) | O2—Zn1 | 2.0687 (18) |
C13—C14 | 1.376 (4) | O4—Zn1 | 2.0203 (17) |
C13—H13A | 0.9300 | O1W—H1X | 0.8500 |
C14—C15 | 1.387 (4) | O1W—H1Y | 0.8500 |
C14—H14A | 0.9300 | O2W—H2X | 0.8500 |
C15—C16 | 1.420 (4) | O2W—H2Y | 0.8501 |
C15—H15A | 0.9300 | O3W—H3X | 0.8500 |
C16—C24 | 1.396 (3) | O3W—H3Y | 0.8500 |
C16—C17 | 1.420 (4) | O4W—H4X | 0.8500 |
C17—C18 | 1.361 (4) | O4W—H4Y | 0.8500 |
C17—H17A | 0.9300 | O5W—H5X | 0.8500 |
C18—C19 | 1.423 (4) | O5W—H5Y | 0.8501 |
N1—C1—C2 | 121.8 (3) | C19—C20—H20A | 120.2 |
N1—C1—H1A | 119.1 | C20—C21—C22 | 120.0 (3) |
C2—C1—H1A | 119.1 | C20—C21—H21A | 120.0 |
C3—C2—C1 | 119.1 (3) | C22—C21—H21A | 120.0 |
C3—C2—H2A | 120.5 | N3—C22—C21 | 121.9 (3) |
C1—C2—H2A | 120.5 | N3—C22—H22A | 119.0 |
C2—C3—C4 | 121.3 (3) | C21—C22—H22A | 119.0 |
C2—C3—H3A | 119.3 | N3—C23—C19 | 122.4 (2) |
C4—C3—H3A | 119.3 | N3—C23—C24 | 118.2 (2) |
C3—C4—C12 | 116.2 (3) | C19—C23—C24 | 119.4 (2) |
C3—C4—C5 | 124.8 (3) | N4—C24—C16 | 122.8 (2) |
C12—C4—C5 | 119.0 (3) | N4—C24—C23 | 117.4 (2) |
C6—C5—C4 | 121.2 (3) | C16—C24—C23 | 119.8 (2) |
C6—C5—H5A | 119.4 | O3—C25—O4 | 122.5 (3) |
C4—C5—H5A | 119.4 | O3—C25—C26 | 119.0 (2) |
C5—C6—C7 | 121.8 (3) | O4—C25—C26 | 118.5 (2) |
C5—C6—H6A | 119.1 | C25—C26—C27 | 117.0 (2) |
C7—C6—H6A | 119.1 | C25—C26—H26A | 108.0 |
C8—C7—C6 | 125.3 (3) | C27—C26—H26A | 108.0 |
C8—C7—C11 | 115.5 (3) | C25—C26—H26B | 108.0 |
C6—C7—C11 | 119.3 (3) | C27—C26—H26B | 108.0 |
C9—C8—C7 | 120.7 (3) | H26A—C26—H26B | 107.3 |
C9—C8—H8A | 119.6 | O1—C27—O2 | 122.8 (3) |
C7—C8—H8A | 119.6 | O1—C27—C26 | 118.5 (2) |
C8—C9—C10 | 119.4 (3) | O2—C27—C26 | 118.6 (2) |
C8—C9—H9A | 120.3 | C1—N1—C12 | 119.2 (2) |
C10—C9—H9A | 120.3 | C1—N1—Zn1 | 127.06 (19) |
N2—C10—C9 | 122.7 (3) | C12—N1—Zn1 | 113.63 (17) |
N2—C10—H10A | 118.7 | C10—N2—C11 | 118.1 (2) |
C9—C10—H10A | 118.7 | C10—N2—Zn1 | 127.68 (19) |
N2—C11—C7 | 123.7 (2) | C11—N2—Zn1 | 114.13 (16) |
N2—C11—C12 | 117.5 (2) | C23—N3—C22 | 119.2 (2) |
C7—C11—C12 | 118.7 (2) | C23—N3—Zn1 | 113.65 (15) |
N1—C12—C4 | 122.4 (3) | C22—N3—Zn1 | 127.12 (18) |
N1—C12—C11 | 117.9 (2) | C24—N4—C13 | 118.5 (2) |
C4—C12—C11 | 119.6 (2) | C24—N4—Zn1 | 113.60 (16) |
N4—C13—C14 | 123.2 (3) | C13—N4—Zn1 | 127.68 (17) |
N4—C13—H13A | 118.4 | C27—O2—Zn1 | 125.77 (17) |
C14—C13—H13A | 118.4 | C25—O4—Zn1 | 126.93 (16) |
C13—C14—C15 | 118.5 (2) | H1X—O1W—H1Y | 109.5 |
C13—C14—H14A | 120.7 | H2X—O2W—H2Y | 109.5 |
C15—C14—H14A | 120.7 | H3X—O3W—H3Y | 109.5 |
C14—C15—C16 | 119.2 (2) | H4X—O4W—H4Y | 109.5 |
C14—C15—H15A | 120.4 | H5X—O5W—H5Y | 109.5 |
C16—C15—H15A | 120.4 | O4—Zn1—O2 | 90.76 (7) |
C24—C16—C17 | 119.7 (2) | O4—Zn1—N3 | 97.33 (8) |
C24—C16—C15 | 117.6 (2) | O2—Zn1—N3 | 97.98 (8) |
C17—C16—C15 | 122.7 (2) | O4—Zn1—N4 | 173.14 (8) |
C18—C17—C16 | 121.3 (2) | O2—Zn1—N4 | 86.27 (7) |
C18—C17—H17A | 119.3 | N3—Zn1—N4 | 76.99 (8) |
C16—C17—H17A | 119.3 | O4—Zn1—N1 | 92.29 (8) |
C17—C18—C19 | 120.4 (3) | O2—Zn1—N1 | 89.90 (8) |
C17—C18—H18A | 119.8 | N3—Zn1—N1 | 167.45 (8) |
C19—C18—H18A | 119.8 | N4—Zn1—N1 | 93.89 (8) |
C20—C19—C23 | 116.8 (2) | O4—Zn1—N2 | 90.97 (7) |
C20—C19—C18 | 123.8 (3) | O2—Zn1—N2 | 166.13 (8) |
C23—C19—C18 | 119.4 (2) | N3—Zn1—N2 | 95.45 (8) |
C21—C20—C19 | 119.7 (2) | N4—Zn1—N2 | 93.38 (8) |
C21—C20—H20A | 120.2 | N1—Zn1—N2 | 76.28 (8) |
N1—C1—C2—C3 | −0.8 (5) | C12—C11—N2—Zn1 | 5.5 (3) |
C1—C2—C3—C4 | −0.4 (5) | C19—C23—N3—C22 | 1.3 (4) |
C2—C3—C4—C12 | 0.5 (4) | C24—C23—N3—C22 | 179.6 (2) |
C2—C3—C4—C5 | 178.1 (3) | C19—C23—N3—Zn1 | 178.89 (18) |
C3—C4—C5—C6 | 176.1 (3) | C24—C23—N3—Zn1 | −2.8 (3) |
C12—C4—C5—C6 | −6.4 (4) | C21—C22—N3—C23 | 0.0 (4) |
C4—C5—C6—C7 | 4.5 (4) | C21—C22—N3—Zn1 | −177.25 (19) |
C5—C6—C7—C8 | 179.8 (3) | C16—C24—N4—C13 | −0.8 (4) |
C5—C6—C7—C11 | 1.1 (4) | C23—C24—N4—C13 | 178.6 (2) |
C6—C7—C8—C9 | −178.1 (2) | C16—C24—N4—Zn1 | −176.35 (19) |
C11—C7—C8—C9 | 0.6 (4) | C23—C24—N4—Zn1 | 3.0 (3) |
C7—C8—C9—C10 | 0.8 (4) | C14—C13—N4—C24 | −0.4 (4) |
C8—C9—C10—N2 | −2.5 (4) | C14—C13—N4—Zn1 | 174.43 (19) |
C8—C7—C11—N2 | −0.5 (3) | O1—C27—O2—Zn1 | −162.6 (2) |
C6—C7—C11—N2 | 178.3 (2) | C26—C27—O2—Zn1 | 18.8 (3) |
C8—C7—C11—C12 | 176.6 (2) | O3—C25—O4—Zn1 | 161.7 (2) |
C6—C7—C11—C12 | −4.6 (3) | C26—C25—O4—Zn1 | −20.2 (3) |
C3—C4—C12—N1 | 0.6 (4) | C25—O4—Zn1—O2 | −8.0 (2) |
C5—C4—C12—N1 | −177.1 (2) | C25—O4—Zn1—N3 | 90.2 (2) |
C3—C4—C12—C11 | −179.5 (2) | C25—O4—Zn1—N1 | −97.9 (2) |
C5—C4—C12—C11 | 2.8 (3) | C25—O4—Zn1—N2 | −174.2 (2) |
N2—C11—C12—N1 | −0.2 (3) | C27—O2—Zn1—O4 | 8.4 (2) |
C7—C11—C12—N1 | −177.5 (2) | C27—O2—Zn1—N3 | −89.1 (2) |
N2—C11—C12—C4 | 179.9 (2) | C27—O2—Zn1—N4 | −165.4 (2) |
C7—C11—C12—C4 | 2.6 (3) | C27—O2—Zn1—N1 | 100.7 (2) |
N4—C13—C14—C15 | −0.8 (4) | C27—O2—Zn1—N2 | 105.6 (3) |
C13—C14—C15—C16 | 3.2 (4) | C23—N3—Zn1—O4 | −172.87 (16) |
C14—C15—C16—C24 | −4.2 (4) | C22—N3—Zn1—O4 | 4.5 (2) |
C14—C15—C16—C17 | 178.3 (3) | C23—N3—Zn1—O2 | −81.06 (17) |
C24—C16—C17—C18 | 0.8 (4) | C22—N3—Zn1—O2 | 96.3 (2) |
C15—C16—C17—C18 | 178.2 (3) | C23—N3—Zn1—N4 | 3.22 (16) |
C16—C17—C18—C19 | −1.8 (4) | C22—N3—Zn1—N4 | −179.4 (2) |
C17—C18—C19—C20 | −177.9 (3) | C23—N3—Zn1—N1 | 47.4 (4) |
C17—C18—C19—C23 | 0.6 (4) | C22—N3—Zn1—N1 | −135.2 (3) |
C23—C19—C20—C21 | 0.6 (4) | C23—N3—Zn1—N2 | 95.44 (17) |
C18—C19—C20—C21 | 179.2 (3) | C22—N3—Zn1—N2 | −87.2 (2) |
C19—C20—C21—C22 | 0.6 (4) | C24—N4—Zn1—O2 | 95.76 (17) |
C20—C21—C22—N3 | −1.0 (4) | C13—N4—Zn1—O2 | −79.3 (2) |
C20—C19—C23—N3 | −1.6 (4) | C24—N4—Zn1—N3 | −3.32 (16) |
C18—C19—C23—N3 | 179.8 (2) | C13—N4—Zn1—N3 | −178.4 (2) |
C20—C19—C23—C24 | −179.9 (2) | C24—N4—Zn1—N1 | −174.59 (17) |
C18—C19—C23—C24 | 1.4 (4) | C13—N4—Zn1—N1 | 10.4 (2) |
C17—C16—C24—N4 | −179.3 (2) | C24—N4—Zn1—N2 | −98.13 (17) |
C15—C16—C24—N4 | 3.1 (4) | C13—N4—Zn1—N2 | 86.8 (2) |
C17—C16—C24—C23 | 1.3 (4) | C1—N1—Zn1—O4 | 91.7 (2) |
C15—C16—C24—C23 | −176.2 (2) | C12—N1—Zn1—O4 | −84.51 (17) |
N3—C23—C24—N4 | −0.2 (3) | C1—N1—Zn1—O2 | 0.9 (2) |
C19—C23—C24—N4 | 178.2 (2) | C12—N1—Zn1—O2 | −175.27 (17) |
N3—C23—C24—C16 | 179.2 (2) | C1—N1—Zn1—N3 | −128.2 (4) |
C19—C23—C24—C16 | −2.4 (3) | C12—N1—Zn1—N3 | 55.6 (4) |
O3—C25—C26—C27 | −127.4 (3) | C1—N1—Zn1—N4 | −85.4 (2) |
O4—C25—C26—C27 | 54.4 (3) | C12—N1—Zn1—N4 | 98.47 (17) |
C25—C26—C27—O1 | 127.6 (3) | C1—N1—Zn1—N2 | −177.9 (2) |
C25—C26—C27—O2 | −53.7 (4) | C12—N1—Zn1—N2 | 5.93 (16) |
C2—C1—N1—C12 | 1.9 (4) | C10—N2—Zn1—O4 | −89.9 (2) |
C2—C1—N1—Zn1 | −174.1 (2) | C11—N2—Zn1—O4 | 86.02 (16) |
C4—C12—N1—C1 | −1.8 (4) | C10—N2—Zn1—O2 | 173.0 (3) |
C11—C12—N1—C1 | 178.3 (2) | C11—N2—Zn1—O2 | −11.1 (4) |
C4—C12—N1—Zn1 | 174.74 (18) | C10—N2—Zn1—N3 | 7.6 (2) |
C11—C12—N1—Zn1 | −5.2 (3) | C11—N2—Zn1—N3 | −176.52 (16) |
C9—C10—N2—C11 | 2.6 (3) | C10—N2—Zn1—N4 | 84.9 (2) |
C9—C10—N2—Zn1 | 178.34 (18) | C11—N2—Zn1—N4 | −99.28 (16) |
C7—C11—N2—C10 | −1.1 (3) | C10—N2—Zn1—N1 | 178.0 (2) |
C12—C11—N2—C10 | −178.2 (2) | C11—N2—Zn1—N1 | −6.10 (15) |
C7—C11—N2—Zn1 | −177.38 (17) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1X···O2 | 0.85 | 1.85 | 2.696 (3) | 178 |
O1W—H1Y···O5Wi | 0.85 | 2.50 | 3.085 (3) | 127 |
O2W—H2X···O3Wii | 0.85 | 2.18 | 2.836 (4) | 133 |
O2W—H2Y···O4Wiii | 0.85 | 2.09 | 2.804 (4) | 141 |
O3W—H3X···O1iv | 0.85 | 2.21 | 2.696 (3) | 116 |
O3W—H3Y···O3v | 0.85 | 2.27 | 2.806 (3) | 121 |
O4W—H4X···O3W | 0.85 | 2.10 | 2.953 (3) | 180 |
O4W—H4Y···O1Wiv | 0.85 | 2.07 | 2.854 (3) | 153 |
O5W—H5X···O1W | 0.85 | 1.94 | 2.789 (3) | 179 |
O5W—H5Y···O2Wvi | 0.85 | 2.21 | 2.733 (3) | 120 |
O5W—H5Y···O1Wi | 0.85 | 2.57 | 3.085 (3) | 120 |
Symmetry codes: (i) −x+2, −y, −z+2; (ii) −x, −y+1, −z+1; (iii) x, y, z−1; (iv) x−1, y, z; (v) −x+1, −y+1, −z+1; (vi) −x+1, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C3H2O4)(C12H8N2)2]·5H2O |
Mr | 617.90 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 291 |
a, b, c (Å) | 10.3802 (15), 10.580 (3), 13.059 (2) |
α, β, γ (°) | 84.682 (2), 76.965 (3), 72.834 (2) |
V (Å3) | 1334.5 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.98 |
Crystal size (mm) | 0.26 × 0.20 × 0.18 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2000) |
Tmin, Tmax | 0.784, 0.843 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13993, 5236, 4851 |
Rint | 0.045 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.097, 1.02 |
No. of reflections | 5236 |
No. of parameters | 370 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.32, −0.80 |
Computer programs: SMART (Bruker, 2000), SAINT-Plus (Bruker, 2000), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1X···O2 | 0.85 | 1.85 | 2.696 (3) | 178 |
O1W—H1Y···O5Wi | 0.85 | 2.50 | 3.085 (3) | 127 |
O2W—H2X···O3Wii | 0.85 | 2.18 | 2.836 (4) | 133 |
O2W—H2Y···O4Wiii | 0.85 | 2.09 | 2.804 (4) | 141 |
O3W—H3X···O1iv | 0.85 | 2.21 | 2.696 (3) | 116 |
O3W—H3Y···O3v | 0.85 | 2.27 | 2.806 (3) | 121 |
O4W—H4X···O3W | 0.85 | 2.10 | 2.953 (3) | 180 |
O4W—H4Y···O1Wiv | 0.85 | 2.07 | 2.854 (3) | 153 |
O5W—H5X···O1W | 0.85 | 1.94 | 2.789 (3) | 179 |
O5W—H5Y···O2Wvi | 0.85 | 2.21 | 2.733 (3) | 120 |
O5W—H5Y···O1Wi | 0.85 | 2.57 | 3.085 (3) | 120 |
Symmetry codes: (i) −x+2, −y, −z+2; (ii) −x, −y+1, −z+1; (iii) x, y, z−1; (iv) x−1, y, z; (v) −x+1, −y+1, −z+1; (vi) −x+1, −y, −z+1. |
Acknowledgements
This work was supported by the Education Department Foundation of Fujian Province of China (grant Nos. JA08212 and 2008 F5053) and the Master Construction Project of Quanzhou Normal University.
References
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Recently, there have been a number of reports on zinc-aliphatic dicarboxylate complexes with 1,10-phenanthroline (phen) as co-ligand (Fu et al. 2006; Kuang et al.,2007; Yang et al., 2007; Zheng et al., 2002; Liu et al., 2004; Zhang et al.,2005). In order to continue this research, we have synthesized the title complex [Zn(C3H2O4)(C12H8N2)2].5H2O and have characterized it by elemental analysis and single-crystal X-ray diffraction analysis.
The ZnII cation has a slightly distorted octahedral geometry and is coordinated by four N atoms from two phen ligands and two O atoms from different carboxylate groups of the chelating malonate dianion. The equatorial plane is defined by atoms N1,N2,N3,O2; the apical positions being occupied by N4 and O4. The Zn—O (2.0203–2.0687 (17) Å) and Zn—N (2.141–2.176 (2) Å) bond lengths are in the normal ranges (Guilera et al.,1999; Tao, et al., 2000).
The crystal packing is stabilized by intermolecular π-π interactions between the phenyl rings [for example Cg(5)···Cg(8)a = 3.4654 (17) Å, Cg(7)···Cg(7)b = 3.697 (2) Å, with Cg(5) the centroid of ring N2/C7—C11, Cg(8) of ring C4—C12, Cg(7) of ring N4/C13-C16/C24, symmetry codes: (a) 1 - x,-y, 1 - z, (b) 1 - x,-y, 2 - z], and O—H···O hydrogen bonds (Table 1, Fig. 2).