metal-organic compounds
Poly[dibromidobis[μ-1-(pyridin-4-ylmethyl)-1H-1,2,4-triazole-κ2N:N′]cadmium]
aDepartment of Medicinal Chemistry, School of Pharmacy, Fujian Medical University, Fuzhou, Fujian 350004, People's Republic of China
*Correspondence e-mail: lizhulai@126.com
The title coordination polymer, [CdBr2(C8H8N4)2]n, arose from a layer-separated diffusion synthesis at room temperature. The title compound is isotypic with the I and Cl analogues. The Cd atom, located on an inversion center, is coordinated by two bromide ions and four N atoms (two from triazole rings and two from pyridyl rings) in a distorted trans-CdBr2N4 octahedral arrangement. The bridging 1-(4-pyridylmethyl)-1H-1,2,4-triazole ligands are twisted [dihedral angle between the triazole and pyridine rings = 72.56 (13)°], affording a two-dimensional 44 sheet structure in the crystal.
Related literature
For structures of Cd(II) polymers with related ligands, see: Liu et al. (2005); Huang et al. (2006). For the structures of isotypic analogues with I and Cl, see: Wang et al. (2008, 2010). For the structure of the isotypic complex with Cu(II) and Cl, see: Li et al. (2009).
Experimental
Crystal data
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Data collection: CrystalClear (Rigaku/MSC, 2004); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811000535/bh2328sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811000535/bh2328Isup2.hkl
A solution of pyta (0.021 g, 0.10 mmol) in MeOH (5 ml) was carefully layered on a solution of CdBr2 (0.027 g, 0.10 mmol) in H2O (5 ml). Diffusion between the two phases over a period of two weeks produced colorless block crystals.
All H atoms were placed in calculated positions and refined using a riding model with C—H bond lengths fixed to 0.93 (aromatic) or 0.97 Å (methylene), and isotropic displacement parameters calculated as 1.2 times the equivalent displacement parameter of the carrier C atom.
Data collection: CrystalClear (Rigaku/MSC, 2004); cell
CrystalClear (Rigaku/MSC, 2004); data reduction: CrystalClear (Rigaku/MSC, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).[CdBr2(C8H8N4)2] | F(000) = 572 |
Mr = 592.59 | Dx = 1.961 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 2944 reflections |
a = 7.7802 (9) Å | θ = 2.6–27.5° |
b = 16.7299 (16) Å | µ = 5.09 mm−1 |
c = 8.4684 (10) Å | T = 293 K |
β = 114.409 (5)° | Block, yellow |
V = 1003.74 (19) Å3 | 0.65 × 0.60 × 0.55 mm |
Z = 2 |
Rigaku Mercury70 CCD diffractometer | 2270 independent reflections |
Radiation source: fine-focus sealed tube | 2098 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.022 |
Detector resolution: 14.6306 pixels mm-1 | θmax = 27.5°, θmin = 3.1° |
ω scans | h = −10→10 |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | k = −21→19 |
Tmin = 0.498, Tmax = 1.000 | l = −10→10 |
7206 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.024 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.069 | H-atom parameters constrained |
S = 0.91 | w = 1/[σ2(Fo2) + (0.048P)2 + 0.7729P] where P = (Fo2 + 2Fc2)/3 |
2270 reflections | (Δ/σ)max = 0.083 |
124 parameters | Δρmax = 0.74 e Å−3 |
0 restraints | Δρmin = −0.51 e Å−3 |
0 constraints |
[CdBr2(C8H8N4)2] | V = 1003.74 (19) Å3 |
Mr = 592.59 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.7802 (9) Å | µ = 5.09 mm−1 |
b = 16.7299 (16) Å | T = 293 K |
c = 8.4684 (10) Å | 0.65 × 0.60 × 0.55 mm |
β = 114.409 (5)° |
Rigaku Mercury70 CCD diffractometer | 2270 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 2098 reflections with I > 2σ(I) |
Tmin = 0.498, Tmax = 1.000 | Rint = 0.022 |
7206 measured reflections |
R[F2 > 2σ(F2)] = 0.024 | 0 restraints |
wR(F2) = 0.069 | H-atom parameters constrained |
S = 0.91 | Δρmax = 0.74 e Å−3 |
2270 reflections | Δρmin = −0.51 e Å−3 |
124 parameters |
x | y | z | Uiso*/Ueq | ||
Cd1 | 0.0000 | 0.5000 | 0.5000 | 0.02280 (9) | |
Br1 | 0.19066 (4) | 0.538566 (18) | 0.30452 (4) | 0.03501 (10) | |
C1 | 0.2617 (4) | 0.57653 (19) | 0.8969 (4) | 0.0371 (6) | |
H1A | 0.1582 | 0.5731 | 0.9248 | 0.044* | |
C2 | 0.4305 (4) | 0.56459 (17) | 0.7599 (4) | 0.0303 (5) | |
H2A | 0.4757 | 0.5526 | 0.6768 | 0.036* | |
C3 | 0.7295 (4) | 0.61998 (17) | 0.9870 (4) | 0.0380 (7) | |
H3A | 0.7919 | 0.5889 | 0.9293 | 0.046* | |
H3B | 0.7836 | 0.6045 | 1.1082 | 0.046* | |
C4 | 0.7711 (4) | 0.70758 (15) | 0.9750 (4) | 0.0297 (6) | |
C5 | 0.6428 (4) | 0.76858 (18) | 0.9397 (5) | 0.0404 (7) | |
H5A | 0.5176 | 0.7576 | 0.9173 | 0.048* | |
C6 | 0.7013 (4) | 0.84676 (17) | 0.9379 (4) | 0.0388 (7) | |
H6A | 0.6129 | 0.8875 | 0.9146 | 0.047* | |
C7 | 1.0005 (4) | 0.8062 (2) | 1.0007 (5) | 0.0458 (8) | |
H7A | 1.1243 | 0.8186 | 1.0204 | 0.055* | |
C8 | 0.9543 (5) | 0.72732 (18) | 1.0071 (5) | 0.0439 (8) | |
H8A | 1.0458 | 0.6877 | 1.0329 | 0.053* | |
N1 | 0.5308 (3) | 0.59953 (13) | 0.9121 (3) | 0.0299 (5) | |
N2 | 0.4232 (4) | 0.60782 (17) | 1.0010 (3) | 0.0421 (6) | |
N3 | 0.2588 (3) | 0.54957 (14) | 0.7446 (3) | 0.0293 (5) | |
N4 | 0.8769 (3) | 0.86608 (13) | 0.9675 (3) | 0.0327 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.02036 (14) | 0.01935 (14) | 0.02797 (15) | 0.00065 (9) | 0.00926 (11) | −0.00225 (9) |
Br1 | 0.03130 (17) | 0.04281 (18) | 0.03652 (17) | 0.00314 (12) | 0.01962 (13) | 0.00383 (11) |
C1 | 0.0407 (16) | 0.0381 (15) | 0.0380 (15) | −0.0095 (13) | 0.0219 (13) | −0.0070 (12) |
C2 | 0.0263 (13) | 0.0304 (13) | 0.0339 (14) | −0.0032 (11) | 0.0120 (11) | −0.0059 (11) |
C3 | 0.0299 (14) | 0.0247 (13) | 0.0469 (17) | −0.0070 (11) | 0.0033 (13) | −0.0006 (12) |
C4 | 0.0316 (14) | 0.0218 (12) | 0.0318 (13) | −0.0059 (10) | 0.0092 (11) | −0.0013 (10) |
C5 | 0.0278 (14) | 0.0297 (14) | 0.0595 (19) | −0.0051 (11) | 0.0138 (14) | 0.0007 (13) |
C6 | 0.0298 (14) | 0.0243 (13) | 0.0595 (19) | 0.0013 (11) | 0.0157 (14) | 0.0046 (12) |
C7 | 0.0329 (16) | 0.0255 (15) | 0.083 (3) | −0.0035 (12) | 0.0282 (17) | −0.0032 (14) |
C8 | 0.0340 (15) | 0.0234 (14) | 0.075 (2) | −0.0006 (12) | 0.0227 (16) | −0.0022 (13) |
N1 | 0.0309 (12) | 0.0221 (10) | 0.0320 (11) | −0.0059 (9) | 0.0083 (10) | −0.0018 (8) |
N2 | 0.0496 (16) | 0.0464 (15) | 0.0362 (13) | −0.0175 (13) | 0.0235 (12) | −0.0127 (11) |
N3 | 0.0257 (11) | 0.0310 (12) | 0.0297 (11) | −0.0026 (9) | 0.0100 (9) | −0.0046 (9) |
N4 | 0.0328 (12) | 0.0221 (11) | 0.0449 (14) | −0.0022 (9) | 0.0177 (11) | 0.0007 (9) |
Cd1—N3 | 2.363 (2) | C3—H3A | 0.9700 |
Cd1—N3i | 2.363 (2) | C3—H3B | 0.9700 |
Cd1—N4ii | 2.407 (2) | C4—C5 | 1.372 (4) |
Cd1—N4iii | 2.407 (2) | C4—C8 | 1.376 (4) |
Cd1—Br1 | 2.7178 (4) | C5—C6 | 1.387 (4) |
Cd1—Br1i | 2.7178 (3) | C5—H5A | 0.9300 |
C1—N2 | 1.310 (4) | C6—N4 | 1.323 (4) |
C1—N3 | 1.358 (4) | C6—H6A | 0.9300 |
C1—H1A | 0.9300 | C7—N4 | 1.335 (4) |
C2—N3 | 1.312 (4) | C7—C8 | 1.375 (4) |
C2—N1 | 1.334 (4) | C7—H7A | 0.9300 |
C2—H2A | 0.9300 | C8—H8A | 0.9300 |
C3—N1 | 1.449 (4) | N1—N2 | 1.345 (4) |
C3—C4 | 1.513 (4) | N4—Cd1iv | 2.407 (2) |
N3—Cd1—N3i | 180.0 | H3A—C3—H3B | 107.6 |
N3—Cd1—N4ii | 85.88 (8) | C5—C4—C8 | 117.8 (3) |
N3i—Cd1—N4ii | 94.12 (8) | C5—C4—C3 | 125.3 (3) |
N3—Cd1—N4iii | 94.12 (8) | C8—C4—C3 | 116.9 (3) |
N3i—Cd1—N4iii | 85.88 (8) | C4—C5—C6 | 119.4 (3) |
N4ii—Cd1—N4iii | 180.0 | C4—C5—H5A | 120.3 |
N3—Cd1—Br1 | 88.21 (6) | C6—C5—H5A | 120.3 |
N3i—Cd1—Br1 | 91.79 (6) | N4—C6—C5 | 123.1 (3) |
N4ii—Cd1—Br1 | 90.06 (6) | N4—C6—H6A | 118.4 |
N4iii—Cd1—Br1 | 89.94 (6) | C5—C6—H6A | 118.4 |
N3—Cd1—Br1i | 91.79 (6) | N4—C7—C8 | 123.4 (3) |
N3i—Cd1—Br1i | 88.21 (6) | N4—C7—H7A | 118.3 |
N4ii—Cd1—Br1i | 89.94 (6) | C8—C7—H7A | 118.3 |
N4iii—Cd1—Br1i | 90.06 (6) | C7—C8—C4 | 119.3 (3) |
Br1—Cd1—Br1i | 180.0 | C7—C8—H8A | 120.4 |
N2—C1—N3 | 114.0 (3) | C4—C8—H8A | 120.4 |
N2—C1—H1A | 123.0 | C2—N1—N2 | 109.6 (2) |
N3—C1—H1A | 123.0 | C2—N1—C3 | 128.3 (3) |
N3—C2—N1 | 110.2 (3) | N2—N1—C3 | 121.9 (2) |
N3—C2—H2A | 124.9 | C1—N2—N1 | 103.2 (2) |
N1—C2—H2A | 124.9 | C2—N3—C1 | 103.0 (2) |
N1—C3—C4 | 114.7 (2) | C2—N3—Cd1 | 128.17 (19) |
N1—C3—H3A | 108.6 | C1—N3—Cd1 | 128.52 (19) |
C4—C3—H3A | 108.6 | C6—N4—C7 | 117.0 (2) |
N1—C3—H3B | 108.6 | C6—N4—Cd1iv | 125.46 (19) |
C4—C3—H3B | 108.6 | C7—N4—Cd1iv | 117.12 (19) |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) x−1, −y+3/2, z−1/2; (iii) −x+1, y−1/2, −z+3/2; (iv) −x+1, y+1/2, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | [CdBr2(C8H8N4)2] |
Mr | 592.59 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 7.7802 (9), 16.7299 (16), 8.4684 (10) |
β (°) | 114.409 (5) |
V (Å3) | 1003.74 (19) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 5.09 |
Crystal size (mm) | 0.65 × 0.60 × 0.55 |
Data collection | |
Diffractometer | Rigaku Mercury70 CCD diffractometer |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.498, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7206, 2270, 2098 |
Rint | 0.022 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.024, 0.069, 0.91 |
No. of reflections | 2270 |
No. of parameters | 124 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.74, −0.51 |
Computer programs: CrystalClear (Rigaku/MSC, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Acknowledgements
The authors would like to thank the Fujian Provincial Science and Technology Innovation Foundation for financial support under grant No. 2007 F3038.
References
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Recently, our group has focused on the design and synthesis of some flexible unsymmetric ligands (Liu et al., 2005; Huang et al., 2006), one of which being the heterocyclic ligand pyta, N-(4-pyridylmethyl)-1,2,4-triazole. In order to explore the architectural styles and other features of this kind of ligands, we selected cadmium dibromide as a representative subject for stereoregular coordination. Among our attempts, a new polymer [CdBr2(pyta)2]n was obtained as crystals suitable for single-crystal X-ray analysis.
The crystal structure of the title compound is isomorphous to other complexes we have reported with I or Cl in place of Br (Wang et al., 2008, 2010) or with Cu(II) and Cl (Li et al., 2009). The crystallographic analysis reveals that the title compound crystallizes in the monoclinic space group P21/c. The asymmetric unit contains one cadmium atom, one bromide donor and one pyta bridging molecule, as shown in Fig. 1. The Cd(II) ion is placed on an inversion center, with an octahedral [CdBr2N4] environment, where the axial positions are occupied by two bromide ions and the equatorial positions occupied by two trans triazole N atoms and two trans pyridyl N atoms, each of which respectively belonging to four symmetry-related pyta ligands (Fig. 1). The bond angles about the Cd octahedron range from 85.88 (8) to 94.12 (8)° and deviate slightly from those of a perfect octahedron. Due to the existence of the —CH2— spacer between the triazole and the pyridyl ring, sufficient flexibility makes possible for pyta to be twisted in order to meet the requirement of coordination geometry of the metal center. The dihedral angle between the triazole and pyridyl rings in the ligand is 72.56 (13)°.
As conveniently shown in Fig. 2, the title compound forms an infinite two-dimensional rhombohedral sheet containing 36-membered sandglass rings. The sp3 hybridization of C3 forces the pyta ligand to be non-linear, generating the nonlinear grid sides and thereby the sandglass grids. Every complementary four [Cd4(pyta)4] grids are connected together by sharing the cadmium apices to give the 44 two-dimensional structure with a side length of 11.01 Å, and a diagonal measurement of about 14.31 × 16.73 Å2.