organic compounds
Enrofloxacinium picrate
aDepartment of Chemistry, Keene State College, 229 Main Street, Keene, NH 03435-2001, USA, bDepartment of Chemistry, Howard University, 525 College Street NW, Washington, DC 20059, USA, and cDepartment of Studies in Chemistry, University of Mysore, Manasagangotri, Mysore 570 006, India
*Correspondence e-mail: jjasinski@keene.edu
There is one cation–anion pair in the 19H23FN3O3+·C6H2N3O7−. The six-membered piperazine group in the cation adopts a slightly distorted chair conformation and contains a protonated N atom. The dihedral angles between the mean planes of the cyclopropyl and piperazine rings in the cation with the 10-atom ring system of the quinolone group are 48.1 (1) and 69.9 (5)°, respectively. The picrate anion interacts with the protonated N atom of an adjacent cation through a bifurcated N—H⋯O three-center hydrogen bond, forming an R12(6) ring motif. Furthermore, there is an intramolecular O—H⋯O hydrogen bond. The dihedral angle between the mean planes of the anion benzene and cation piperizine, quinoline and cyclopropyl rings are 61.3 (6), 31.1 (4) and 70.4 (9)°, respectively. The mean planes of the two o-NO2 and single p-NO2 groups in the picrate anion are twisted by 6.7 (6), 38.3 (9) and 12.8 (7)° with respect to the mean plane of the benzene ring. Strong N—H⋯O and weak intermolecular C—H⋯O hydrogen bonds in concert with weak π–π stacking interactions [centroid–centroid distances = 3.5785 (13), 3.7451 (12) and 3.6587 (13) Å] dominate the crystal packing.
of the title compound [systematic name: 4-(3-carboxy-6-fluoro-4-oxo-1,4-dihydroquinolin-7-yl)-1-ethylpiperazin-1-ium 2,4,6-trinitrophenolate], CRelated literature
For background to fluoroquinolones, see: Bhanot et al. (2001); Scholar (2003). For related structures, see: Hu & Yu, (2005); Jasinski et al. (2009, 2010a, 2010b); Recillas-Mota et al. (2007); Sun et al. (2004); Wang et al. (2005); Zou et al. (2005). For puckering parameters, see: Cremer & Pople (1975). For standard bond lengths, see: Allen et al. (1987).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Oxford Diffraction, 2007); cell CrysAlis PRO; data reduction: CrysAlis RED (Oxford Diffraction, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S160053681100170X/bt5451sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053681100170X/bt5451Isup2.hkl
Enrofloxacin (3.59 g, 0.1 mol) and picric acid (2.99 g, 0.1 mol) were dissolved in a mixture of acetonitrile and dimethyl sulfoxide (80:20 v/v). The solution was stirred for 15 min over a heating magnetic stirrer at 333 K. The resulting solution was kept aside at room temperature. After few days, X-ray quality crystals of the title compound were grown by slow evaporation (m.p.: 490 – 493 K).
All H atoms were refined using the riding model with Atom—H lengths of 0.93 & 0.98Å (CH), 0.97Å (CH2), 0.96Å (CH3), 0.91Å (NH) or 0.82 (OH). Isotropic displacement parameters for these atoms were set to 1.20 times (NH), 1.19–1.20 (CH, CH2) or 1.49 (CH3, OH) times Ueq of the parent atom.
Data collection: CrysAlis PRO (Oxford Diffraction, 2007); cell
CrysAlis PRO (Oxford Diffraction, 2007); data reduction: CrysAlis RED (Oxford Diffraction, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. Molecular structure of the title compound showing the atom labeling scheme and 50% probability displacement ellipsoids. Dashed lines indicate a bifurcated N—H···O intermolecular, three-centered hydrogen bond formed between the protonated N atom from the enrofloxacin cation and the picrate anion providing a R12(6) ring motif. | |
Fig. 2. Packing diagram of the title compound viewed down the a axis. Dashed lines indicate N—H···O hydrogen bonds and weak C—H···O intermolecular interactions creating a 2-D network structure along 011. |
C19H23FN3O3+·C6H2N3O7− | Z = 2 |
Mr = 588.51 | F(000) = 612 |
Triclinic, P1 | Dx = 1.401 Mg m−3 |
Hall symbol: -P 1 | Cu Kα radiation, λ = 1.54178 Å |
a = 7.2111 (7) Å | Cell parameters from 2958 reflections |
b = 12.5766 (7) Å | θ = 5.3–73.4° |
c = 16.2362 (4) Å | µ = 0.98 mm−1 |
α = 105.556 (2)° | T = 295 K |
β = 96.367 (6)° | Plate, pale yellow |
γ = 96.223 (7)° | 0.44 × 0.31 × 0.12 mm |
V = 1395.04 (16) Å3 |
Oxford Diffraction Xcalibur Ruby Gemini diffractometer | 5437 independent reflections |
Radiation source: Enhance (Cu) X-ray Source | 3425 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.032 |
Detector resolution: 10.5081 pixels mm-1 | θmax = 73.6°, θmin = 5.3° |
ω scans | h = −5→8 |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007) | k = −15→14 |
Tmin = 0.896, Tmax = 1.000 | l = −20→20 |
9440 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.055 | H-atom parameters constrained |
wR(F2) = 0.177 | w = 1/[σ2(Fo2) + (0.0924P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.00 | (Δ/σ)max < 0.001 |
5437 reflections | Δρmax = 0.20 e Å−3 |
382 parameters | Δρmin = −0.20 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0007 (4) |
C19H23FN3O3+·C6H2N3O7− | γ = 96.223 (7)° |
Mr = 588.51 | V = 1395.04 (16) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.2111 (7) Å | Cu Kα radiation |
b = 12.5766 (7) Å | µ = 0.98 mm−1 |
c = 16.2362 (4) Å | T = 295 K |
α = 105.556 (2)° | 0.44 × 0.31 × 0.12 mm |
β = 96.367 (6)° |
Oxford Diffraction Xcalibur Ruby Gemini diffractometer | 5437 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007) | 3425 reflections with I > 2σ(I) |
Tmin = 0.896, Tmax = 1.000 | Rint = 0.032 |
9440 measured reflections |
R[F2 > 2σ(F2)] = 0.055 | 0 restraints |
wR(F2) = 0.177 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.20 e Å−3 |
5437 reflections | Δρmin = −0.20 e Å−3 |
382 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
F1 | 0.0392 (3) | 0.14397 (14) | 0.02905 (11) | 0.0785 (5) | |
O1 | 0.4038 (4) | 0.7253 (2) | −0.10088 (16) | 0.0920 (8) | |
O2 | 0.3085 (3) | 0.5648 (2) | −0.19916 (12) | 0.0747 (6) | |
H2 | 0.2552 | 0.5031 | −0.2008 | 0.112* | |
O3 | 0.2077 (3) | 0.39341 (17) | −0.15203 (11) | 0.0611 (5) | |
N1 | 0.2699 (3) | 0.59410 (17) | 0.09706 (12) | 0.0456 (5) | |
N2 | 0.0978 (3) | 0.27232 (19) | 0.20117 (14) | 0.0580 (6) | |
N3 | 0.3999 (3) | 0.2675 (2) | 0.33307 (14) | 0.0591 (6) | |
H3A | 0.3366 | 0.2332 | 0.3665 | 0.071* | |
C1 | 0.1315 (3) | 0.3205 (2) | 0.13528 (16) | 0.0490 (6) | |
C2 | 0.1818 (3) | 0.4344 (2) | 0.14892 (15) | 0.0460 (5) | |
H2A | 0.1934 | 0.4819 | 0.2046 | 0.055* | |
C3 | 0.2153 (3) | 0.47948 (19) | 0.08107 (13) | 0.0405 (5) | |
C4 | 0.3062 (3) | 0.6357 (2) | 0.03193 (15) | 0.0465 (5) | |
H4A | 0.3420 | 0.7123 | 0.0444 | 0.056* | |
C5 | 0.2938 (3) | 0.5723 (2) | −0.05229 (15) | 0.0469 (5) | |
C6 | 0.3401 (4) | 0.6293 (3) | −0.11816 (18) | 0.0617 (7) | |
C7 | 0.2321 (3) | 0.4553 (2) | −0.07435 (14) | 0.0465 (5) | |
C8 | 0.1951 (3) | 0.4099 (2) | −0.00384 (14) | 0.0448 (5) | |
C9 | 0.1368 (3) | 0.2958 (2) | −0.01881 (16) | 0.0510 (6) | |
H9A | 0.1199 | 0.2484 | −0.0748 | 0.061* | |
C10 | 0.1051 (4) | 0.2543 (2) | 0.04762 (17) | 0.0553 (6) | |
C11 | 0.2678 (4) | 0.6702 (2) | 0.18217 (16) | 0.0519 (6) | |
H11A | 0.1420 | 0.6815 | 0.1971 | 0.062* | |
C12 | 0.4138 (4) | 0.6777 (3) | 0.25637 (18) | 0.0645 (7) | |
H12A | 0.3750 | 0.6903 | 0.3131 | 0.077* | |
H12B | 0.5118 | 0.6306 | 0.2463 | 0.077* | |
C13 | 0.4137 (5) | 0.7695 (3) | 0.2158 (2) | 0.0735 (8) | |
H13A | 0.5119 | 0.7788 | 0.1810 | 0.088* | |
H13B | 0.3752 | 0.8384 | 0.2478 | 0.088* | |
C14 | 0.1708 (5) | 0.1684 (3) | 0.2041 (2) | 0.0691 (8) | |
H14A | 0.1588 | 0.1193 | 0.1458 | 0.083* | |
H14B | 0.0958 | 0.1309 | 0.2368 | 0.083* | |
C15 | 0.3727 (4) | 0.1898 (3) | 0.24448 (18) | 0.0639 (7) | |
H15A | 0.4143 | 0.1198 | 0.2470 | 0.077* | |
H15B | 0.4494 | 0.2213 | 0.2090 | 0.077* | |
C16 | 0.3177 (5) | 0.3719 (2) | 0.33310 (18) | 0.0650 (7) | |
H16A | 0.3916 | 0.4147 | 0.3034 | 0.078* | |
H16B | 0.3222 | 0.4172 | 0.3921 | 0.078* | |
C17 | 0.1147 (4) | 0.3434 (3) | 0.28845 (17) | 0.0612 (7) | |
H17A | 0.0393 | 0.3063 | 0.3213 | 0.073* | |
H17B | 0.0651 | 0.4118 | 0.2874 | 0.073* | |
C18 | 0.6053 (5) | 0.2905 (4) | 0.3705 (3) | 0.0917 (11) | |
H18A | 0.6582 | 0.2213 | 0.3560 | 0.110* | |
H18B | 0.6707 | 0.3413 | 0.3441 | 0.110* | |
C19 | 0.6391 (7) | 0.3390 (4) | 0.4650 (3) | 0.1301 (18) | |
H19A | 0.7709 | 0.3660 | 0.4836 | 0.195* | |
H19B | 0.6006 | 0.2830 | 0.4923 | 0.195* | |
H19C | 0.5677 | 0.3997 | 0.4807 | 0.195* | |
O1A | 0.1749 (3) | 0.2238 (2) | 0.44767 (13) | 0.0791 (7) | |
O2A | 0.1956 (6) | 0.4178 (2) | 0.5795 (2) | 0.1384 (15) | |
O3A | −0.0251 (4) | 0.3840 (2) | 0.64871 (17) | 0.0934 (8) | |
O4A | 0.0864 (4) | 0.0906 (2) | 0.78322 (15) | 0.0947 (8) | |
O5A | 0.2090 (4) | −0.0501 (2) | 0.71552 (16) | 0.0919 (8) | |
O6A | 0.3078 (3) | −0.09139 (19) | 0.42732 (14) | 0.0761 (6) | |
O7A | 0.3468 (4) | 0.0487 (2) | 0.37754 (15) | 0.0939 (8) | |
N1A | 0.0996 (4) | 0.3558 (2) | 0.60751 (17) | 0.0724 (7) | |
N2A | 0.1542 (4) | 0.0399 (2) | 0.72150 (14) | 0.0640 (6) | |
N3A | 0.2989 (3) | 0.0068 (2) | 0.43254 (14) | 0.0594 (6) | |
C1A | 0.1855 (3) | 0.1834 (2) | 0.50984 (16) | 0.0528 (6) | |
C2A | 0.1375 (4) | 0.2406 (2) | 0.59322 (17) | 0.0531 (6) | |
C3A | 0.1247 (4) | 0.1958 (2) | 0.65942 (16) | 0.0526 (6) | |
H3AA | 0.0879 | 0.2362 | 0.7103 | 0.063* | |
C4A | 0.1673 (3) | 0.0878 (2) | 0.65059 (15) | 0.0494 (6) | |
C5A | 0.2252 (3) | 0.0292 (2) | 0.57639 (16) | 0.0489 (5) | |
H5AA | 0.2573 | −0.0416 | 0.5717 | 0.059* | |
C6A | 0.2361 (3) | 0.0748 (2) | 0.50884 (15) | 0.0486 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1 | 0.1083 (14) | 0.0580 (10) | 0.0638 (11) | −0.0030 (9) | 0.0032 (9) | 0.0181 (8) |
O1 | 0.129 (2) | 0.0800 (16) | 0.0781 (15) | −0.0007 (15) | 0.0328 (14) | 0.0403 (13) |
O2 | 0.0854 (14) | 0.1032 (17) | 0.0458 (11) | 0.0184 (12) | 0.0220 (9) | 0.0319 (10) |
O3 | 0.0700 (11) | 0.0758 (12) | 0.0350 (9) | 0.0115 (9) | 0.0124 (8) | 0.0093 (8) |
N1 | 0.0441 (10) | 0.0565 (12) | 0.0375 (10) | 0.0120 (9) | 0.0084 (8) | 0.0128 (8) |
N2 | 0.0635 (13) | 0.0660 (14) | 0.0527 (12) | 0.0125 (11) | 0.0111 (10) | 0.0286 (11) |
N3 | 0.0636 (13) | 0.0714 (15) | 0.0543 (13) | 0.0129 (11) | 0.0117 (10) | 0.0358 (11) |
C1 | 0.0479 (12) | 0.0589 (15) | 0.0458 (13) | 0.0112 (11) | 0.0087 (10) | 0.0224 (11) |
C2 | 0.0479 (12) | 0.0560 (14) | 0.0356 (11) | 0.0150 (10) | 0.0049 (9) | 0.0130 (10) |
C3 | 0.0372 (10) | 0.0521 (13) | 0.0344 (10) | 0.0139 (9) | 0.0058 (8) | 0.0131 (9) |
C4 | 0.0425 (11) | 0.0555 (14) | 0.0456 (13) | 0.0111 (10) | 0.0099 (9) | 0.0182 (10) |
C5 | 0.0433 (12) | 0.0630 (15) | 0.0403 (12) | 0.0147 (11) | 0.0100 (9) | 0.0200 (11) |
C6 | 0.0618 (16) | 0.084 (2) | 0.0526 (15) | 0.0217 (15) | 0.0219 (12) | 0.0319 (14) |
C7 | 0.0368 (11) | 0.0665 (15) | 0.0392 (12) | 0.0155 (10) | 0.0083 (9) | 0.0157 (11) |
C8 | 0.0400 (11) | 0.0586 (14) | 0.0383 (11) | 0.0161 (10) | 0.0055 (9) | 0.0147 (10) |
C9 | 0.0544 (13) | 0.0554 (14) | 0.0408 (12) | 0.0149 (11) | 0.0044 (10) | 0.0077 (10) |
C10 | 0.0579 (14) | 0.0553 (15) | 0.0515 (14) | 0.0071 (12) | 0.0039 (11) | 0.0156 (11) |
C11 | 0.0520 (13) | 0.0588 (15) | 0.0439 (13) | 0.0149 (11) | 0.0109 (10) | 0.0087 (11) |
C12 | 0.0591 (15) | 0.0800 (19) | 0.0465 (14) | 0.0117 (14) | 0.0044 (11) | 0.0053 (13) |
C13 | 0.087 (2) | 0.0675 (19) | 0.0558 (17) | −0.0051 (16) | 0.0171 (15) | 0.0045 (13) |
C14 | 0.094 (2) | 0.0607 (17) | 0.0593 (17) | 0.0093 (15) | 0.0109 (15) | 0.0299 (14) |
C15 | 0.085 (2) | 0.0666 (17) | 0.0584 (16) | 0.0319 (15) | 0.0293 (14) | 0.0329 (13) |
C16 | 0.092 (2) | 0.0609 (17) | 0.0481 (15) | 0.0189 (15) | 0.0131 (13) | 0.0205 (12) |
C17 | 0.0722 (17) | 0.0759 (18) | 0.0541 (15) | 0.0292 (14) | 0.0270 (13) | 0.0352 (13) |
C18 | 0.073 (2) | 0.114 (3) | 0.100 (3) | 0.014 (2) | −0.0005 (19) | 0.054 (2) |
C19 | 0.124 (4) | 0.145 (4) | 0.107 (4) | −0.007 (3) | −0.042 (3) | 0.045 (3) |
O1A | 0.0990 (15) | 0.1074 (17) | 0.0575 (12) | 0.0444 (13) | 0.0295 (11) | 0.0493 (12) |
O2A | 0.217 (4) | 0.0739 (18) | 0.162 (3) | 0.035 (2) | 0.101 (3) | 0.061 (2) |
O3A | 0.1141 (19) | 0.0871 (17) | 0.0886 (17) | 0.0479 (15) | 0.0326 (15) | 0.0208 (13) |
O4A | 0.158 (2) | 0.0823 (16) | 0.0574 (13) | 0.0197 (15) | 0.0483 (15) | 0.0295 (11) |
O5A | 0.137 (2) | 0.0827 (16) | 0.0819 (16) | 0.0374 (15) | 0.0402 (15) | 0.0491 (13) |
O6A | 0.0938 (15) | 0.0690 (14) | 0.0653 (13) | 0.0195 (11) | 0.0230 (11) | 0.0112 (10) |
O7A | 0.143 (2) | 0.0989 (17) | 0.0629 (14) | 0.0416 (16) | 0.0566 (15) | 0.0364 (12) |
N1A | 0.0965 (19) | 0.0661 (16) | 0.0625 (15) | 0.0235 (14) | 0.0164 (14) | 0.0250 (12) |
N2A | 0.0870 (16) | 0.0625 (15) | 0.0475 (12) | 0.0052 (12) | 0.0192 (11) | 0.0224 (11) |
N3A | 0.0624 (13) | 0.0688 (16) | 0.0470 (12) | 0.0137 (11) | 0.0110 (10) | 0.0136 (11) |
C1A | 0.0504 (13) | 0.0682 (16) | 0.0464 (13) | 0.0124 (12) | 0.0100 (10) | 0.0250 (12) |
C2A | 0.0553 (14) | 0.0580 (15) | 0.0505 (14) | 0.0104 (11) | 0.0113 (11) | 0.0206 (11) |
C3A | 0.0556 (14) | 0.0602 (15) | 0.0410 (12) | 0.0048 (11) | 0.0099 (10) | 0.0130 (11) |
C4A | 0.0541 (13) | 0.0545 (14) | 0.0415 (12) | 0.0022 (11) | 0.0105 (10) | 0.0180 (10) |
C5A | 0.0489 (12) | 0.0482 (13) | 0.0495 (13) | 0.0036 (10) | 0.0071 (10) | 0.0151 (10) |
C6A | 0.0468 (12) | 0.0622 (15) | 0.0360 (11) | 0.0056 (11) | 0.0072 (9) | 0.0128 (10) |
F1—C10 | 1.358 (3) | C13—H13B | 0.9700 |
O1—C6 | 1.191 (4) | C14—C15 | 1.493 (4) |
O2—C6 | 1.327 (4) | C14—H14A | 0.9700 |
O2—H2 | 0.8200 | C14—H14B | 0.9700 |
O3—C7 | 1.274 (3) | C15—H15A | 0.9700 |
N1—C4 | 1.337 (3) | C15—H15B | 0.9700 |
N1—C3 | 1.398 (3) | C16—C17 | 1.519 (4) |
N1—C11 | 1.457 (3) | C16—H16A | 0.9700 |
N2—C1 | 1.394 (3) | C16—H16B | 0.9700 |
N2—C17 | 1.443 (4) | C17—H17A | 0.9700 |
N2—C14 | 1.472 (4) | C17—H17B | 0.9700 |
N3—C15 | 1.485 (4) | C18—C19 | 1.473 (6) |
N3—C16 | 1.497 (4) | C18—H18A | 0.9700 |
N3—C18 | 1.503 (4) | C18—H18B | 0.9700 |
N3—H3A | 0.9100 | C19—H19A | 0.9600 |
C1—C2 | 1.390 (3) | C19—H19B | 0.9600 |
C1—C10 | 1.423 (4) | C19—H19C | 0.9600 |
C2—C3 | 1.399 (3) | O1A—C1A | 1.245 (3) |
C2—H2A | 0.9300 | O2A—N1A | 1.199 (4) |
C3—C8 | 1.403 (3) | O3A—N1A | 1.207 (3) |
C4—C5 | 1.373 (3) | O4A—N2A | 1.218 (3) |
C4—H4A | 0.9300 | O5A—N2A | 1.222 (3) |
C5—C7 | 1.425 (4) | O6A—N3A | 1.224 (3) |
C5—C6 | 1.486 (3) | O7A—N3A | 1.215 (3) |
C7—C8 | 1.447 (3) | N1A—C2A | 1.465 (4) |
C8—C9 | 1.398 (4) | N2A—C4A | 1.443 (3) |
C9—C10 | 1.349 (4) | N3A—C6A | 1.453 (3) |
C9—H9A | 0.9300 | C1A—C6A | 1.447 (4) |
C11—C13 | 1.479 (4) | C1A—C2A | 1.451 (4) |
C11—C12 | 1.485 (4) | C2A—C3A | 1.348 (3) |
C11—H11A | 0.9800 | C3A—C4A | 1.399 (4) |
C12—C13 | 1.475 (5) | C3A—H3AA | 0.9300 |
C12—H12A | 0.9700 | C4A—C5A | 1.368 (3) |
C12—H12B | 0.9700 | C5A—C6A | 1.373 (3) |
C13—H13A | 0.9700 | C5A—H5AA | 0.9300 |
C6—O2—H2 | 109.5 | N2—C14—H14A | 109.3 |
C4—N1—C3 | 119.8 (2) | C15—C14—H14A | 109.3 |
C4—N1—C11 | 119.3 (2) | N2—C14—H14B | 109.3 |
C3—N1—C11 | 120.48 (19) | C15—C14—H14B | 109.3 |
C1—N2—C17 | 118.9 (2) | H14A—C14—H14B | 107.9 |
C1—N2—C14 | 120.3 (2) | N3—C15—C14 | 111.4 (2) |
C17—N2—C14 | 108.4 (2) | N3—C15—H15A | 109.3 |
C15—N3—C16 | 110.8 (2) | C14—C15—H15A | 109.3 |
C15—N3—C18 | 110.0 (3) | N3—C15—H15B | 109.3 |
C16—N3—C18 | 112.6 (3) | C14—C15—H15B | 109.3 |
C15—N3—H3A | 107.7 | H15A—C15—H15B | 108.0 |
C16—N3—H3A | 107.7 | N3—C16—C17 | 110.3 (2) |
C18—N3—H3A | 107.7 | N3—C16—H16A | 109.6 |
C2—C1—N2 | 123.5 (2) | C17—C16—H16A | 109.6 |
C2—C1—C10 | 115.7 (2) | N3—C16—H16B | 109.6 |
N2—C1—C10 | 120.7 (2) | C17—C16—H16B | 109.6 |
C1—C2—C3 | 121.8 (2) | H16A—C16—H16B | 108.1 |
C1—C2—H2A | 119.1 | N2—C17—C16 | 112.2 (2) |
C3—C2—H2A | 119.1 | N2—C17—H17A | 109.2 |
N1—C3—C2 | 120.5 (2) | C16—C17—H17A | 109.2 |
N1—C3—C8 | 119.3 (2) | N2—C17—H17B | 109.2 |
C2—C3—C8 | 120.3 (2) | C16—C17—H17B | 109.2 |
N1—C4—C5 | 124.0 (2) | H17A—C17—H17B | 107.9 |
N1—C4—H4A | 118.0 | C19—C18—N3 | 113.3 (3) |
C5—C4—H4A | 118.0 | C19—C18—H18A | 108.9 |
C4—C5—C7 | 119.5 (2) | N3—C18—H18A | 108.9 |
C4—C5—C6 | 118.4 (2) | C19—C18—H18B | 108.9 |
C7—C5—C6 | 122.1 (2) | N3—C18—H18B | 108.9 |
O1—C6—O2 | 121.3 (3) | H18A—C18—H18B | 107.7 |
O1—C6—C5 | 123.5 (3) | C18—C19—H19A | 109.5 |
O2—C6—C5 | 115.2 (3) | C18—C19—H19B | 109.5 |
O3—C7—C5 | 122.2 (2) | H19A—C19—H19B | 109.5 |
O3—C7—C8 | 121.2 (2) | C18—C19—H19C | 109.5 |
C5—C7—C8 | 116.6 (2) | H19A—C19—H19C | 109.5 |
C9—C8—C3 | 118.4 (2) | H19B—C19—H19C | 109.5 |
C9—C8—C7 | 120.8 (2) | O2A—N1A—O3A | 123.2 (3) |
C3—C8—C7 | 120.8 (2) | O2A—N1A—C2A | 118.8 (3) |
C10—C9—C8 | 120.2 (2) | O3A—N1A—C2A | 118.0 (3) |
C10—C9—H9A | 119.9 | O4A—N2A—O5A | 123.8 (2) |
C8—C9—H9A | 119.9 | O4A—N2A—C4A | 118.1 (2) |
C9—C10—F1 | 117.8 (2) | O5A—N2A—C4A | 118.1 (2) |
C9—C10—C1 | 123.5 (3) | O7A—N3A—O6A | 121.8 (2) |
F1—C10—C1 | 118.6 (2) | O7A—N3A—C6A | 119.9 (2) |
N1—C11—C13 | 119.6 (2) | O6A—N3A—C6A | 118.2 (2) |
N1—C11—C12 | 121.4 (2) | O1A—C1A—C6A | 126.2 (2) |
C13—C11—C12 | 59.7 (2) | O1A—C1A—C2A | 122.3 (3) |
N1—C11—H11A | 115.0 | C6A—C1A—C2A | 111.4 (2) |
C13—C11—H11A | 115.0 | C3A—C2A—C1A | 124.9 (2) |
C12—C11—H11A | 115.0 | C3A—C2A—N1A | 116.8 (2) |
C13—C12—C11 | 60.0 (2) | C1A—C2A—N1A | 118.3 (2) |
C13—C12—H12A | 117.8 | C2A—C3A—C4A | 119.2 (2) |
C11—C12—H12A | 117.8 | C2A—C3A—H3AA | 120.4 |
C13—C12—H12B | 117.8 | C4A—C3A—H3AA | 120.4 |
C11—C12—H12B | 117.8 | C5A—C4A—C3A | 120.4 (2) |
H12A—C12—H12B | 114.9 | C5A—C4A—N2A | 120.3 (2) |
C12—C13—C11 | 60.36 (19) | C3A—C4A—N2A | 119.3 (2) |
C12—C13—H13A | 117.7 | C4A—C5A—C6A | 120.1 (2) |
C11—C13—H13A | 117.7 | C4A—C5A—H5AA | 120.0 |
C12—C13—H13B | 117.7 | C6A—C5A—H5AA | 120.0 |
C11—C13—H13B | 117.7 | C5A—C6A—C1A | 123.7 (2) |
H13A—C13—H13B | 114.9 | C5A—C6A—N3A | 116.4 (2) |
N2—C14—C15 | 111.8 (2) | C1A—C6A—N3A | 119.9 (2) |
C17—N2—C1—C2 | 0.3 (4) | C3—N1—C11—C12 | 74.5 (3) |
C14—N2—C1—C2 | −137.6 (3) | N1—C11—C12—C13 | 108.3 (3) |
C17—N2—C1—C10 | −176.1 (2) | N1—C11—C13—C12 | −111.2 (3) |
C14—N2—C1—C10 | 46.0 (3) | C1—N2—C14—C15 | 82.1 (3) |
N2—C1—C2—C3 | 179.7 (2) | C17—N2—C14—C15 | −59.7 (3) |
C10—C1—C2—C3 | −3.8 (3) | C16—N3—C15—C14 | −52.8 (3) |
C4—N1—C3—C2 | 178.3 (2) | C18—N3—C15—C14 | −177.9 (2) |
C11—N1—C3—C2 | −8.4 (3) | N2—C14—C15—N3 | 57.1 (3) |
C4—N1—C3—C8 | −1.5 (3) | C15—N3—C16—C17 | 52.0 (3) |
C11—N1—C3—C8 | 171.75 (19) | C18—N3—C16—C17 | 175.7 (2) |
C1—C2—C3—N1 | −178.5 (2) | C1—N2—C17—C16 | −82.7 (3) |
C1—C2—C3—C8 | 1.3 (3) | C14—N2—C17—C16 | 59.7 (3) |
C3—N1—C4—C5 | −0.1 (3) | N3—C16—C17—N2 | −57.0 (3) |
C11—N1—C4—C5 | −173.4 (2) | C15—N3—C18—C19 | −163.2 (3) |
N1—C4—C5—C7 | 2.5 (3) | C16—N3—C18—C19 | 72.6 (4) |
N1—C4—C5—C6 | −179.3 (2) | O1A—C1A—C2A—C3A | 171.7 (3) |
C4—C5—C6—O1 | 7.0 (4) | C6A—C1A—C2A—C3A | −5.5 (4) |
C7—C5—C6—O1 | −174.8 (3) | O1A—C1A—C2A—N1A | −8.2 (4) |
C4—C5—C6—O2 | −174.1 (2) | C6A—C1A—C2A—N1A | 174.5 (2) |
C7—C5—C6—O2 | 4.1 (4) | O2A—N1A—C2A—C3A | 140.3 (3) |
C4—C5—C7—O3 | 176.0 (2) | O3A—N1A—C2A—C3A | −38.2 (4) |
C6—C5—C7—O3 | −2.2 (3) | O2A—N1A—C2A—C1A | −39.8 (4) |
C4—C5—C7—C8 | −3.0 (3) | O3A—N1A—C2A—C1A | 141.7 (3) |
C6—C5—C7—C8 | 178.8 (2) | C1A—C2A—C3A—C4A | 2.8 (4) |
N1—C3—C8—C9 | −178.78 (19) | N1A—C2A—C3A—C4A | −177.3 (2) |
C2—C3—C8—C9 | 1.4 (3) | C2A—C3A—C4A—C5A | 1.4 (4) |
N1—C3—C8—C7 | 0.7 (3) | C2A—C3A—C4A—N2A | 179.8 (2) |
C2—C3—C8—C7 | −179.07 (19) | O4A—N2A—C4A—C5A | −173.7 (3) |
O3—C7—C8—C9 | 2.0 (3) | O5A—N2A—C4A—C5A | 5.2 (4) |
C5—C7—C8—C9 | −179.0 (2) | O4A—N2A—C4A—C3A | 7.9 (4) |
O3—C7—C8—C3 | −177.5 (2) | O5A—N2A—C4A—C3A | −173.2 (3) |
C5—C7—C8—C3 | 1.5 (3) | C3A—C4A—C5A—C6A | −2.1 (4) |
C3—C8—C9—C10 | −1.4 (3) | N2A—C4A—C5A—C6A | 179.5 (2) |
C7—C8—C9—C10 | 179.1 (2) | C4A—C5A—C6A—C1A | −1.3 (4) |
C8—C9—C10—F1 | 176.6 (2) | C4A—C5A—C6A—N3A | −180.0 (2) |
C8—C9—C10—C1 | −1.4 (4) | O1A—C1A—C6A—C5A | −172.4 (3) |
C2—C1—C10—C9 | 3.9 (4) | C2A—C1A—C6A—C5A | 4.7 (3) |
N2—C1—C10—C9 | −179.4 (2) | O1A—C1A—C6A—N3A | 6.3 (4) |
C2—C1—C10—F1 | −174.0 (2) | C2A—C1A—C6A—N3A | −176.6 (2) |
N2—C1—C10—F1 | 2.6 (4) | O7A—N3A—C6A—C5A | −165.8 (3) |
C4—N1—C11—C13 | −41.8 (3) | O6A—N3A—C6A—C5A | 11.8 (3) |
C3—N1—C11—C13 | 145.0 (2) | O7A—N3A—C6A—C1A | 15.4 (4) |
C4—N1—C11—C12 | −112.3 (3) | O6A—N3A—C6A—C1A | −167.0 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···O3 | 0.82 | 1.78 | 2.536 (3) | 151 |
N3—H3A···O1A | 0.91 | 1.87 | 2.724 (3) | 155 |
N3—H3A···O7A | 0.91 | 2.38 | 3.024 (3) | 128 |
C11—H11A···O3i | 0.98 | 2.55 | 3.385 (3) | 144 |
C15—H15B···O1ii | 0.97 | 2.35 | 3.312 (3) | 169 |
C17—H17B···O3Aiii | 0.97 | 2.56 | 3.458 (4) | 154 |
C3A—H3AA···O3iv | 0.93 | 2.55 | 3.331 (3) | 142 |
C9—H9A···O4Av | 0.93 | 2.58 | 3.495 (3) | 170 |
C14—H14B···O5Avi | 0.97 | 2.60 | 3.517 (4) | 157 |
C18—H18A···O5Avii | 0.97 | 2.50 | 3.451 (5) | 167 |
Symmetry codes: (i) −x, −y+1, −z; (ii) −x+1, −y+1, −z; (iii) −x, −y+1, −z+1; (iv) x, y, z+1; (v) x, y, z−1; (vi) −x, −y, −z+1; (vii) −x+1, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C19H23FN3O3+·C6H2N3O7− |
Mr | 588.51 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 295 |
a, b, c (Å) | 7.2111 (7), 12.5766 (7), 16.2362 (4) |
α, β, γ (°) | 105.556 (2), 96.367 (6), 96.223 (7) |
V (Å3) | 1395.04 (16) |
Z | 2 |
Radiation type | Cu Kα |
µ (mm−1) | 0.98 |
Crystal size (mm) | 0.44 × 0.31 × 0.12 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur Ruby Gemini diffractometer |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2007) |
Tmin, Tmax | 0.896, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9440, 5437, 3425 |
Rint | 0.032 |
(sin θ/λ)max (Å−1) | 0.622 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.055, 0.177, 1.00 |
No. of reflections | 5437 |
No. of parameters | 382 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.20, −0.20 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2007), CrysAlis RED (Oxford Diffraction, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···O3 | 0.82 | 1.78 | 2.536 (3) | 151 |
N3—H3A···O1A | 0.91 | 1.87 | 2.724 (3) | 155 |
N3—H3A···O7A | 0.91 | 2.38 | 3.024 (3) | 128 |
C11—H11A···O3i | 0.98 | 2.55 | 3.385 (3) | 144 |
C15—H15B···O1ii | 0.97 | 2.35 | 3.312 (3) | 169 |
C17—H17B···O3Aiii | 0.97 | 2.56 | 3.458 (4) | 154 |
C3A—H3AA···O3iv | 0.93 | 2.55 | 3.331 (3) | 142 |
C9—H9A···O4Av | 0.93 | 2.58 | 3.495 (3) | 170 |
C14—H14B···O5Avi | 0.97 | 2.60 | 3.517 (4) | 157 |
C18—H18A···O5Avii | 0.97 | 2.50 | 3.451 (5) | 167 |
Symmetry codes: (i) −x, −y+1, −z; (ii) −x+1, −y+1, −z; (iii) −x, −y+1, −z+1; (iv) x, y, z+1; (v) x, y, z−1; (vi) −x, −y, −z+1; (vii) −x+1, −y, −z+1. |
CgI···CgJ | Cg···Cg (Å) | CgI Perp (Å) | Cgj Perp (Å) | Slippage (Å) |
Cg2···Cg2i | 3.5785 (13) | -3.3834 (9) | -3.3834 (9) | 1.16 (5) |
Cg2···Cg2ii | 3.7451 (12) | -3.6091 (9) | 3.6090 (9) | 1.00 (0) |
Cg2···Cg4ii | 3.6587 (13) | -3.3748 (9) | -3.4114 (10) |
Acknowledgements
MSS thanks the University of Mysore for the research facilities and HSY thanks the UOM for sabbatical leave. RJB acknowledges the NSF MRI program (grant No. CHE-0619278) for funds to purchase an X-ray diffractometer.
References
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19. CrossRef Web of Science Google Scholar
Bhanot, S. K., Singh, M. & Chatterjee, N. R. (2001). Curr. Pharm. Des. 7, 313–337. Web of Science CrossRef Google Scholar
Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354–1358. CrossRef CAS Web of Science Google Scholar
Hu, R.-D. & Yu, Q.-S. (2005). Z. Krystallogr. New Cryst. Struct. 220, 171–172. CAS Google Scholar
Jasinski, J. P., Butcher, R. J., Hakim Al-Arique, Q. N. M., Yathirajan, H. S. & Narayana, B. (2009). Acta Cryst. E65, o1738–o1739. Web of Science CSD CrossRef IUCr Journals Google Scholar
Jasinski, J. P., Butcher, R. J., Hakim Al-Arique, Q. N. M., Yathirajan, H. S. & Narayana, B. (2010a). Acta Cryst. E66, o411–o412. Web of Science CSD CrossRef IUCr Journals Google Scholar
Jasinski, J. P., Butcher, R. J., Hakim Al-Arique, Q. N. M., Yathirajan, H. S. & Narayana, B. (2010b). Acta Cryst. E66, o347–o348. Web of Science CSD CrossRef IUCr Journals Google Scholar
Oxford Diffraction (2007). CrysAlis PRO and CrysAlis RED. Oxford Diffraction Ltd, Abingdon,England. Google Scholar
Recillas-Mota, J., Flores-Alamo, M., Moreno-Esparza, R. & Gracia-Mora, J. (2007). Acta Cryst. E63, m3030–m3031. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Scholar, E. M. (2003). Am. J. Pharm. Educ. 66, 165–172. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sun, H.-X., Li, Y. & Pan, Y.-J. (2004). Acta Cryst. E60, o1694–o1696. Web of Science CSD CrossRef IUCr Journals Google Scholar
Wang, Y., Sun, L.-W., Wang, W. & Yan, L.-H. (2005). Chin. J. Struct. Chem. 24, 1359–1362. CAS Google Scholar
Zou, H.-I., Chen, Z.-F. & Liang, H. (2005). J. Guangxi Nor. Univ. Nat. Sci. Ed. 23, 57–60. CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Enrofloxacin is a fluoroquinolone antibiotic and is a synthetic chemotherapeutic agent from the class of the fluoroquinolone carboxylic acid derivatives. It is sold by the Bayer Corporation under the trade name Baytril and has antibacterial activity against a broad spectrum of Gram-negative and Gram-positive bacteria. Its mechanism of action is not thoroughly understood, but it is believed to act by inhibiting bacterial DNA gyrase (a type-II topoisomerase), thereby preventing DNA supercoiling and DNA synthesis. The chemical and biological aspects of fluoroquinolones is described (Bhanot et al., 2001; Scholar, 2003). The crystal structure of norfloxacin hydrochloride (Zou et al., 2005) and norfloxacin methanol solvate (Wang et al., 2005) have already been reported. The crystal structure of a copper complex of enrofloxacin (Recillas-Mota et al., 2007), norfloxacin picrate (Hu & Yu, 2005) and 2-hydroxyethanaminium enrofloxacinate (Sun et al., 2004) are reported. Recently, the crystal structures of propiverine picrate (Jasinski et al., 2009), imatinibium dipicrate (Jasinski et al., 2010a) and chlorimipraminium picrate (Jasinski et al., 2010b) have been reported. In continuation of our work on picrates of biologically active compounds, this paper reports the crystal structure of C19H22FN3O3+ . C6H2N3O7- obtained by the interaction of picric acid and enrofloxacin.
In the crystal structure of the title compound, (I), there is one cation-anion pair in the asymmetric unit (Fig. 1). One N atom in the 6-membered piperazine ring (N2/C14/C15/N3/C16/C17) in the enrofloxacinium cation is protonated which adopts a slightly distorted chair conformation with puckering parameters Q, θ and ϕ of 0.563 (3)A%, 4.0 (3)° and 358.0 (5)° (Cremer & Pople, 1975). The dihedral angles between the mean planes of the cyclopropyl and piperazine rings with the 10-atom ring system of the quinolone group are 48.1 (1)° and 69.9 (5)°, respectively. The picrate anion interacts with the protonated N atom of an adjacent cation through a bifurcated N—H···O three-center hydrogen bond forming a R12(6) ring motif. The dihedral angle between the mean planes of the anion benzene and cation piperizine, quinoline and cyclopropyl rings are 61.3 (6)°, 31.1 (4)° and 70.4 (9)°, respectively. The mean planes of the two o-NO2 and single p-NO2 groups in the picrate anion are twisted by 6.7 (6)°, 38.3 (9)° and 12.8 (7)° with respect to the mean planes of the 6-membered benzene ring. Bond distances and angles are in normal ranges (Allen et al., 1987). Strong N—H···O and weak intermolecular C—H···O hydrogen bonds in concert with weak π–π stacking interactions (Table 2) dominate the crystal packing creating a 2-D network structure along 011 (Fig. 2).