organic compounds
Benzyl N-{2-[5-(4-chlorophenyl)-1,2,4-oxadiazol-3-yl]propan-2-yl}carbamate
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bDepartment of Chemistry, Mangalore University, Mangalagangotri 574 199, Karnatak State, India, and cCrystal Materials Research Unit, Department of Chemistry, Faculty of Science, Prince of Songkla University, Hat-Yai, Songkhla 90112, Thailand
*Correspondence e-mail: hkfun@usm.my
In the title 1,2,4-oxadiazole derivative, C19H18ClN3O3, the 1,2,4-oxadiazole ring makes dihedral angles of 12.83 (8) and 4.89 (8)°, respectively, with the benzyl and 4-chlorophenyl rings, while the dihedral angle between the benzyl and 4-chlorophenyl rings is 11.53 (7)°. In the crystal, molecules are linked by N—H⋯N hydrogen bonds into helical chains along the b axis. A weak C—H⋯π interaction is also present.
Related literature
For bond-length data, see: Allen et al. (1987). For background to and applications of 1,2,4-oxadiazole derivatives, see: Chen et al. (1994); Chimirri et al. (1996); Clitherow et al. (1996); Nicolaides et al. (1998); Saunders et al. (1990); Showell et al. (1991); Swain et al. (1991); Tully et al. (1991); Watjen et al. (1989). For a related structure, see: Fun et al. (2011).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811001504/is2659sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811001504/is2659Isup2.hkl
The title compound was synthesized by taking benzyl [(2E)-2-amino-2-(hydroxyimino)-1,1-dimethylethyl]carbamate (0.1 mole) in 5 mol volume of pyridine and treated with 0.1 mole of 4-chlorobenzoylchloride. The reaction mixture is heated to reflux for 3–4 hrs. After the reaction is completed, the excess pyridine is distilled out under low pressure and the resultant quenched onto ice water. The solid thus formed is filtered and washed with water. The sample is dried and recrystallized in ethanol yielding 95% product. Colorless plate-shaped single crystals of the title compound suitable for x-ray
were recrystalized from ethanol by the slow evaporation of the solvent at room temperature after several days (m.p. 405–409 K).NH hydrogen atom is located in a difference map and refined isotropically. The remaining H atoms were positioned geometrically and allowed to ride on their parent atoms, with d(C—H) = 0.93 Å for aromatic and 0.96 Å for CH3 atoms. The Uiso values were constrained to be 1.5Ueq of the
for methyl H atoms and 1.2Ueq for the remaining H atoms. A rotating group model was used for the methyl groups. A total of 1950 Friedel pairs were used to determined the absolute configurationData collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C19H18ClN3O3 | Dx = 1.380 Mg m−3 |
Mr = 371.81 | Melting point = 405–409 K |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 4556 reflections |
a = 7.7501 (1) Å | θ = 1.9–28.5° |
b = 11.0052 (2) Å | µ = 0.24 mm−1 |
c = 20.9834 (3) Å | T = 297 K |
V = 1789.70 (5) Å3 | Plate, colorless |
Z = 4 | 0.41 × 0.35 × 0.21 mm |
F(000) = 776 |
Bruker APEXII CCD area-detector diffractometer | 4556 independent reflections |
Radiation source: sealed tube | 3620 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.028 |
ϕ and ω scans | θmax = 28.5°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −10→8 |
Tmin = 0.908, Tmax = 0.951 | k = −14→14 |
15995 measured reflections | l = −23→28 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.036 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.087 | w = 1/[σ2(Fo2) + (0.0458P)2 + 0.0092P] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max = 0.001 |
4556 reflections | Δρmax = 0.14 e Å−3 |
241 parameters | Δρmin = −0.21 e Å−3 |
0 restraints | Absolute structure: Flack (1983), 1950 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.01 (6) |
C19H18ClN3O3 | V = 1789.70 (5) Å3 |
Mr = 371.81 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 7.7501 (1) Å | µ = 0.24 mm−1 |
b = 11.0052 (2) Å | T = 297 K |
c = 20.9834 (3) Å | 0.41 × 0.35 × 0.21 mm |
Bruker APEXII CCD area-detector diffractometer | 4556 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 3620 reflections with I > 2σ(I) |
Tmin = 0.908, Tmax = 0.951 | Rint = 0.028 |
15995 measured reflections |
R[F2 > 2σ(F2)] = 0.036 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.087 | Δρmax = 0.14 e Å−3 |
S = 1.02 | Δρmin = −0.21 e Å−3 |
4556 reflections | Absolute structure: Flack (1983), 1950 Friedel pairs |
241 parameters | Absolute structure parameter: 0.01 (6) |
0 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 1.06337 (9) | 0.74415 (5) | −0.14993 (2) | 0.08010 (19) | |
O1 | 0.90644 (16) | 0.42996 (9) | 0.11883 (5) | 0.0490 (3) | |
O2 | 0.62272 (16) | 0.60054 (11) | 0.29142 (7) | 0.0631 (4) | |
O3 | 0.71211 (14) | 0.79437 (9) | 0.30763 (6) | 0.0501 (3) | |
N1 | 1.00418 (18) | 0.59694 (10) | 0.16396 (6) | 0.0422 (3) | |
N2 | 0.89957 (19) | 0.41084 (11) | 0.18577 (6) | 0.0487 (3) | |
N3 | 0.90781 (17) | 0.65050 (11) | 0.29774 (6) | 0.0401 (3) | |
C1 | 1.0718 (2) | 0.70094 (14) | 0.03799 (7) | 0.0470 (4) | |
H1A | 1.1094 | 0.7446 | 0.0733 | 0.056* | |
C2 | 1.0945 (2) | 0.74801 (15) | −0.02232 (8) | 0.0522 (4) | |
H2A | 1.1470 | 0.8233 | −0.0279 | 0.063* | |
C3 | 1.0385 (2) | 0.68209 (16) | −0.07420 (7) | 0.0499 (4) | |
C4 | 0.9627 (2) | 0.56952 (14) | −0.06747 (8) | 0.0517 (4) | |
H4A | 0.9283 | 0.5255 | −0.1031 | 0.062* | |
C5 | 0.9386 (2) | 0.52308 (13) | −0.00694 (7) | 0.0469 (4) | |
H5A | 0.8859 | 0.4478 | −0.0017 | 0.056* | |
C6 | 0.9930 (2) | 0.58868 (12) | 0.04632 (7) | 0.0393 (3) | |
C7 | 0.96954 (19) | 0.54258 (12) | 0.11114 (7) | 0.0386 (3) | |
C8 | 0.9582 (2) | 0.51195 (12) | 0.20882 (7) | 0.0371 (3) | |
C9 | 0.9872 (2) | 0.53376 (12) | 0.27932 (7) | 0.0417 (4) | |
C10 | 0.7365 (2) | 0.67374 (13) | 0.29808 (7) | 0.0414 (3) | |
C11 | 0.5372 (2) | 0.83404 (16) | 0.32187 (8) | 0.0528 (4) | |
H11A | 0.4552 | 0.7744 | 0.3064 | 0.063* | |
H11B | 0.5141 | 0.9106 | 0.3007 | 0.063* | |
C12 | 0.51699 (19) | 0.84918 (13) | 0.39282 (7) | 0.0423 (3) | |
C13 | 0.5898 (2) | 0.94799 (14) | 0.42406 (9) | 0.0545 (4) | |
H13A | 0.6480 | 1.0070 | 0.4008 | 0.065* | |
C14 | 0.5766 (3) | 0.95920 (16) | 0.48927 (9) | 0.0621 (5) | |
H14A | 0.6270 | 1.0253 | 0.5096 | 0.074* | |
C15 | 0.4903 (3) | 0.87436 (17) | 0.52416 (9) | 0.0591 (5) | |
H15A | 0.4826 | 0.8825 | 0.5682 | 0.071* | |
C16 | 0.4146 (2) | 0.77656 (16) | 0.49429 (8) | 0.0572 (4) | |
H16A | 0.3541 | 0.7191 | 0.5179 | 0.069* | |
C17 | 0.4292 (2) | 0.76457 (13) | 0.42877 (8) | 0.0496 (4) | |
H17A | 0.3788 | 0.6981 | 0.4087 | 0.060* | |
C18 | 1.1805 (2) | 0.54871 (16) | 0.28978 (9) | 0.0562 (5) | |
H18A | 1.2220 | 0.6155 | 0.2647 | 0.084* | |
H18B | 1.2389 | 0.4756 | 0.2773 | 0.084* | |
H18C | 1.2024 | 0.5645 | 0.3340 | 0.084* | |
C19 | 0.9170 (3) | 0.42786 (14) | 0.31875 (8) | 0.0592 (5) | |
H19A | 0.7970 | 0.4162 | 0.3092 | 0.089* | |
H19B | 0.9302 | 0.4456 | 0.3633 | 0.089* | |
H19C | 0.9799 | 0.3552 | 0.3085 | 0.089* | |
H1N3 | 0.973 (2) | 0.7115 (14) | 0.2985 (7) | 0.036 (4)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.1106 (5) | 0.0857 (4) | 0.0440 (2) | 0.0012 (3) | 0.0132 (3) | 0.0075 (2) |
O1 | 0.0635 (7) | 0.0416 (5) | 0.0418 (6) | −0.0124 (5) | −0.0050 (6) | −0.0044 (4) |
O2 | 0.0508 (7) | 0.0552 (7) | 0.0833 (10) | −0.0086 (6) | −0.0013 (7) | 0.0010 (6) |
O3 | 0.0486 (7) | 0.0433 (5) | 0.0584 (7) | 0.0076 (5) | 0.0118 (6) | 0.0012 (5) |
N1 | 0.0508 (8) | 0.0373 (6) | 0.0384 (7) | −0.0039 (5) | 0.0004 (6) | −0.0046 (5) |
N2 | 0.0609 (9) | 0.0431 (7) | 0.0422 (7) | −0.0097 (6) | −0.0013 (7) | −0.0010 (5) |
N3 | 0.0438 (8) | 0.0338 (6) | 0.0425 (7) | −0.0013 (6) | 0.0046 (6) | −0.0040 (5) |
C1 | 0.0536 (10) | 0.0451 (8) | 0.0422 (8) | −0.0064 (7) | −0.0001 (8) | −0.0097 (6) |
C2 | 0.0575 (10) | 0.0478 (8) | 0.0514 (9) | −0.0079 (8) | 0.0081 (8) | −0.0012 (7) |
C3 | 0.0530 (10) | 0.0577 (9) | 0.0389 (8) | 0.0070 (8) | 0.0062 (8) | −0.0006 (7) |
C4 | 0.0598 (11) | 0.0534 (9) | 0.0420 (8) | 0.0038 (8) | −0.0090 (8) | −0.0110 (7) |
C5 | 0.0536 (11) | 0.0415 (8) | 0.0457 (8) | −0.0013 (7) | −0.0070 (8) | −0.0065 (6) |
C6 | 0.0399 (8) | 0.0388 (7) | 0.0390 (8) | 0.0034 (6) | 0.0000 (7) | −0.0060 (5) |
C7 | 0.0376 (8) | 0.0352 (7) | 0.0431 (8) | −0.0002 (6) | −0.0026 (7) | −0.0057 (6) |
C8 | 0.0374 (8) | 0.0328 (6) | 0.0410 (7) | 0.0000 (6) | 0.0007 (6) | −0.0021 (5) |
C9 | 0.0507 (10) | 0.0357 (7) | 0.0389 (8) | 0.0043 (6) | 0.0017 (7) | −0.0032 (6) |
C10 | 0.0496 (9) | 0.0419 (7) | 0.0327 (7) | 0.0033 (7) | 0.0047 (7) | 0.0044 (6) |
C11 | 0.0474 (10) | 0.0591 (10) | 0.0518 (10) | 0.0146 (8) | 0.0031 (8) | 0.0053 (7) |
C12 | 0.0345 (8) | 0.0425 (7) | 0.0499 (9) | 0.0088 (6) | 0.0019 (7) | 0.0026 (6) |
C13 | 0.0503 (10) | 0.0438 (8) | 0.0692 (12) | −0.0025 (8) | 0.0048 (9) | 0.0023 (8) |
C14 | 0.0618 (12) | 0.0539 (10) | 0.0705 (12) | 0.0008 (9) | −0.0075 (11) | −0.0185 (8) |
C15 | 0.0585 (12) | 0.0680 (11) | 0.0507 (10) | 0.0107 (9) | 0.0034 (9) | −0.0074 (8) |
C16 | 0.0589 (11) | 0.0567 (10) | 0.0561 (10) | −0.0002 (9) | 0.0101 (9) | 0.0080 (7) |
C17 | 0.0506 (10) | 0.0423 (8) | 0.0560 (9) | −0.0043 (8) | 0.0001 (8) | −0.0035 (7) |
C18 | 0.0540 (11) | 0.0618 (10) | 0.0528 (10) | 0.0117 (8) | −0.0128 (9) | −0.0138 (8) |
C19 | 0.0924 (15) | 0.0401 (8) | 0.0452 (9) | 0.0039 (9) | 0.0064 (10) | 0.0028 (6) |
Cl1—C3 | 1.7404 (16) | C8—C9 | 1.515 (2) |
O1—C7 | 1.3422 (16) | C9—C18 | 1.523 (2) |
O1—N2 | 1.4213 (17) | C9—C19 | 1.529 (2) |
O2—C10 | 1.2023 (19) | C11—C12 | 1.506 (2) |
O3—C10 | 1.3558 (18) | C11—H11A | 0.9700 |
O3—C11 | 1.455 (2) | C11—H11B | 0.9700 |
N1—C7 | 1.2877 (18) | C12—C17 | 1.378 (2) |
N1—C8 | 1.3740 (19) | C12—C13 | 1.390 (2) |
N2—C8 | 1.2955 (18) | C13—C14 | 1.378 (3) |
N3—C10 | 1.352 (2) | C13—H13A | 0.9300 |
N3—C9 | 1.4758 (18) | C14—C15 | 1.362 (3) |
N3—H1N3 | 0.841 (16) | C14—H14A | 0.9300 |
C1—C2 | 1.379 (2) | C15—C16 | 1.377 (3) |
C1—C6 | 1.389 (2) | C15—H15A | 0.9300 |
C1—H1A | 0.9300 | C16—C17 | 1.386 (2) |
C2—C3 | 1.378 (2) | C16—H16A | 0.9300 |
C2—H2A | 0.9300 | C17—H17A | 0.9300 |
C3—C4 | 1.378 (2) | C18—H18A | 0.9600 |
C4—C5 | 1.382 (2) | C18—H18B | 0.9600 |
C4—H4A | 0.9300 | C18—H18C | 0.9600 |
C5—C6 | 1.3957 (19) | C19—H19A | 0.9600 |
C5—H5A | 0.9300 | C19—H19B | 0.9600 |
C6—C7 | 1.463 (2) | C19—H19C | 0.9600 |
C7—O1—N2 | 105.61 (10) | O2—C10—O3 | 124.84 (16) |
C10—O3—C11 | 116.99 (13) | N3—C10—O3 | 108.82 (14) |
C7—N1—C8 | 102.66 (12) | O3—C11—C12 | 109.46 (13) |
C8—N2—O1 | 103.21 (11) | O3—C11—H11A | 109.8 |
C10—N3—C9 | 125.11 (13) | C12—C11—H11A | 109.8 |
C10—N3—H1N3 | 116.2 (10) | O3—C11—H11B | 109.8 |
C9—N3—H1N3 | 116.6 (10) | C12—C11—H11B | 109.8 |
C2—C1—C6 | 120.39 (14) | H11A—C11—H11B | 108.2 |
C2—C1—H1A | 119.8 | C17—C12—C13 | 118.11 (15) |
C6—C1—H1A | 119.8 | C17—C12—C11 | 121.18 (14) |
C3—C2—C1 | 119.14 (15) | C13—C12—C11 | 120.70 (15) |
C3—C2—H2A | 120.4 | C14—C13—C12 | 120.56 (16) |
C1—C2—H2A | 120.4 | C14—C13—H13A | 119.7 |
C2—C3—C4 | 121.76 (15) | C12—C13—H13A | 119.7 |
C2—C3—Cl1 | 118.67 (13) | C15—C14—C13 | 120.61 (17) |
C4—C3—Cl1 | 119.56 (13) | C15—C14—H14A | 119.7 |
C3—C4—C5 | 118.97 (14) | C13—C14—H14A | 119.7 |
C3—C4—H4A | 120.5 | C14—C15—C16 | 120.02 (18) |
C5—C4—H4A | 120.5 | C14—C15—H15A | 120.0 |
C4—C5—C6 | 120.26 (15) | C16—C15—H15A | 120.0 |
C4—C5—H5A | 119.9 | C15—C16—C17 | 119.42 (16) |
C6—C5—H5A | 119.9 | C15—C16—H16A | 120.3 |
C1—C6—C5 | 119.47 (14) | C17—C16—H16A | 120.3 |
C1—C6—C7 | 118.68 (13) | C12—C17—C16 | 121.27 (15) |
C5—C6—C7 | 121.84 (14) | C12—C17—H17A | 119.4 |
N1—C7—O1 | 113.68 (13) | C16—C17—H17A | 119.4 |
N1—C7—C6 | 127.82 (13) | C9—C18—H18A | 109.5 |
O1—C7—C6 | 118.50 (12) | C9—C18—H18B | 109.5 |
N2—C8—N1 | 114.83 (13) | H18A—C18—H18B | 109.5 |
N2—C8—C9 | 123.53 (13) | C9—C18—H18C | 109.5 |
N1—C8—C9 | 121.50 (12) | H18A—C18—H18C | 109.5 |
N3—C9—C8 | 109.39 (12) | H18B—C18—H18C | 109.5 |
N3—C9—C18 | 106.14 (13) | C9—C19—H19A | 109.5 |
C8—C9—C18 | 107.66 (13) | C9—C19—H19B | 109.5 |
N3—C9—C19 | 111.94 (13) | H19A—C19—H19B | 109.5 |
C8—C9—C19 | 110.79 (12) | C9—C19—H19C | 109.5 |
C18—C9—C19 | 110.72 (15) | H19A—C19—H19C | 109.5 |
O2—C10—N3 | 126.34 (14) | H19B—C19—H19C | 109.5 |
C7—O1—N2—C8 | −0.08 (16) | C10—N3—C9—C18 | −177.07 (15) |
C6—C1—C2—C3 | −0.2 (3) | C10—N3—C9—C19 | −56.2 (2) |
C1—C2—C3—C4 | −1.0 (3) | N2—C8—C9—N3 | −131.00 (16) |
C1—C2—C3—Cl1 | 178.49 (14) | N1—C8—C9—N3 | 53.48 (19) |
C2—C3—C4—C5 | 1.6 (3) | N2—C8—C9—C18 | 114.08 (17) |
Cl1—C3—C4—C5 | −177.88 (13) | N1—C8—C9—C18 | −61.44 (18) |
C3—C4—C5—C6 | −1.0 (3) | N2—C8—C9—C19 | −7.1 (2) |
C2—C1—C6—C5 | 0.7 (2) | N1—C8—C9—C19 | 177.35 (15) |
C2—C1—C6—C7 | −179.32 (15) | C9—N3—C10—O2 | 9.9 (3) |
C4—C5—C6—C1 | −0.1 (2) | C9—N3—C10—O3 | −170.43 (13) |
C4—C5—C6—C7 | 179.93 (15) | C11—O3—C10—O2 | 11.3 (2) |
C8—N1—C7—O1 | −0.38 (18) | C11—O3—C10—N3 | −168.37 (12) |
C8—N1—C7—C6 | −179.60 (15) | C10—O3—C11—C12 | 98.05 (16) |
N2—O1—C7—N1 | 0.30 (18) | O3—C11—C12—C17 | −104.15 (17) |
N2—O1—C7—C6 | 179.60 (13) | O3—C11—C12—C13 | 74.49 (18) |
C1—C6—C7—N1 | 4.6 (2) | C17—C12—C13—C14 | 1.1 (2) |
C5—C6—C7—N1 | −175.44 (16) | C11—C12—C13—C14 | −177.57 (16) |
C1—C6—C7—O1 | −174.60 (14) | C12—C13—C14—C15 | −0.7 (3) |
C5—C6—C7—O1 | 5.4 (2) | C13—C14—C15—C16 | −0.3 (3) |
O1—N2—C8—N1 | −0.16 (18) | C14—C15—C16—C17 | 0.9 (3) |
O1—N2—C8—C9 | −175.95 (14) | C13—C12—C17—C16 | −0.5 (2) |
C7—N1—C8—N2 | 0.33 (19) | C11—C12—C17—C16 | 178.18 (15) |
C7—N1—C8—C9 | 176.22 (14) | C15—C16—C17—C12 | −0.5 (3) |
C10—N3—C9—C8 | 67.03 (18) |
Cg1 is the centroid of the C12–C17 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H1N3···N2i | 0.840 (16) | 2.428 (15) | 3.2492 (18) | 165.7 (14) |
C16—H16A···Cg1ii | 0.93 | 2.91 | 3.6700 (18) | 140 |
Symmetry codes: (i) −x+2, y+1/2, −z+1/2; (ii) −x−1, y+3/2, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | C19H18ClN3O3 |
Mr | 371.81 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 297 |
a, b, c (Å) | 7.7501 (1), 11.0052 (2), 20.9834 (3) |
V (Å3) | 1789.70 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.24 |
Crystal size (mm) | 0.41 × 0.35 × 0.21 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.908, 0.951 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15995, 4556, 3620 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.672 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.036, 0.087, 1.02 |
No. of reflections | 4556 |
No. of parameters | 241 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.14, −0.21 |
Absolute structure | Flack (1983), 1950 Friedel pairs |
Absolute structure parameter | 0.01 (6) |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg1 is the centroid of the C12–C17 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H1N3···N2i | 0.840 (16) | 2.428 (15) | 3.2492 (18) | 165.7 (14) |
C16—H16A···Cg1ii | 0.93 | 2.91 | 3.6700 (18) | 140 |
Symmetry codes: (i) −x+2, y+1/2, −z+1/2; (ii) −x−1, y+3/2, −z+3/2. |
Acknowledgements
VS, GKN and BP thank Mangalore University for a research grant. SC thanks the Prince of Songkla University for generous support. The authors thank Universiti Sains Malaysia for the Research University Grant No. 1001/PFIZIK/811160.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The 1,2,4-oxadiazole ring occurs frequently in biologically active synthetic compounds and 1,2,4-oxadiazole derivatives are suggested as potential agonists for cortical muscarinic (Saunders et al., 1990; Showell et al., 1991), benzodiazepine (Watjen et al., 1989; Tully et al., 1991) and 5-HT1D (5-hydroxytryptamine) as receptors (Chen et al., 1994) as well as antagonists for 5-HT3 (Swain et al., 1991) or histamine H3 receptors (Clitherow et al., 1996). They also demonstrate anti-inflammatory (Nicolaides et al., 1998) and antitumor activities (Chimirri et al., 1996). These interesting and important properties of 1,2,4-oxadiazole derivatives lead us to synthesize the title compound (I) and its crystal structure was reported.
In the molecule of (I), (Fig. 1), the 1,2,4-oxadiazole ring is nearly co-planar with the 4-chlorophenyl with a dihedral angle between the two rings being 4.89 (8)°, whereas it is inclined to the benzyl (C11–C17) unit with a dihedral angle of 12.48 (9)°. The dihedral angle between the benzyl group and the phenyl (C1–C6) ring is 11.53 (7)°. The oxycarbonylamino unit (atoms C10, N3, O2 and O3) is planar with an r.m.s. 0.0009 (1) Å. This unit makes dihedral angles of 79.99 (9), 89.15 (9) and 89.64 (9)°, respectively, with the benzyl, 1,2,4-oxadiazole and 4-chlorophenyl rings. The bond distances are of normal values (Allen et al., 1987) and are comparable to the related structure (Fun et al., 2011).
In the crystal packing (Fig. 2), the molecules are linked by by N—H···N hydrogen bonds (Table 1) into helical chains along the b axis. The crystal is stabilized by N—H···O hydrogen bonds and weak C—H···π interactions (Table 1).