organic compounds
1-[4-(3-{[5-(4-Chlorophenyl)furan-2-yl]methylideneamino}-2,5-dioxoimidazolidin-1-yl)butyl]-4-methylpiperazine-1,4-diium dichloride hemihydrate
aTianjin University of Commerce, Tianjin 300134, People's Republic of China, bSchool of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, People's Republic of China, and cTianjin Institute of Pharmaceutical Research, Tianjin, 300193, People's Republic of China
*Correspondence e-mail: myth4307@tju.edu.cn
The title compound, C23H30ClN5O32+·2Cl−·0.5H2O, was synthesized by N-alkylation of 1-({[5-(4-chlorophenyl)-2-furanyl]methylene}amino)-2,4-imidazolidinedione with 1-bromo-4-chlorobutane, and N-methylpiperazine. In the crystal, the cations, anions and water molecules are linked by O—H⋯Cl and N—H⋯Cl hydrogen bonds.
Related literature
For bond-length data, see: Allen et al. (1987). For background to the bioactivity and applications of the title compound, see: Pratt et al. (2004). For the preparation of the title compound, see: Matson et al. (1999).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1997); cell SAINT (Bruker, 1997); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811000560/kp2297sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811000560/kp2297Isup2.hkl
The title compound was prepared according to the method of Matson et al. (1999). A three-neck 1 L flask fitted with a thermometer, mechanical stirrer, heating mantle, reflux condenser and addition funnel is charged with DMF (240 ml) and heated to 323 K. 1-[[[5-(4-Chlorophenyl)-2-furanyl]methylene]amino]-2,4- imidazolidinedione (29 g) is added and heating is continued. When dissolution is completed, potassium carbonate (14 g) is charged to the flask and heating is continued to 353 K. After 20 minutes, 1-bromo-4-chlorobutane (18.5 g) is added, and heating is continued to approximately 373 K. After 50 minutes, N-methylpiperazine (23.5 g) is added, and the mixture is allowed to stir for 2 h at 373 K. The reaction mixture is cooled to approximately 283 K and filtered to remove insolubles. The DMF is removed under reduced pressure at 338–341 K and replaced with absolute ethanol (175 ml). The mixture is heated to dissolve the free base and filtered to remove insolubles. The product is precipitated from ethanol (300 ml total) with the addition of 20 g of concentrated hydrochloric acid and then filtered to give 31 g of Azimilide dihydrochloride. The above dihydrochloride is suspended in 670 ml of refluxing ethanol and 150 ml of water are added to obtain complete solubilization. The mixture was standing under 298 K, then white crystals were grown slowly. The crystals were washed with cold ethanol, yield 25.6 g.
The two water H atoms were located in a difference Fourier map and then refined as riding on the water O atom (0.85 and 0.86 Å). Other H atoms were positioned geometrically and refined using a riding model, with d(C—H) = 0.93 - 0.97 Å and Uiso(H) = 1.2Ueq(C) or 1.5Ueq(Cmethyl).
Data collection: SMART (Bruker, 1997); cell
SAINT (Bruker, 1997); data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of (I) with the atom-numbering scheme and 30% probability displacement ellipsoids. | |
Fig. 2. Packing diagram for (I) with hydrogen bonds drawn by dashed lines. |
C23H30ClN5O32+·2Cl−·0.5H2O | F(000) = 2264 |
Mr = 539.88 | Dx = 1.368 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 2226 reflections |
a = 59.563 (12) Å | θ = 2.7–27.7° |
b = 6.8793 (14) Å | µ = 0.39 mm−1 |
c = 12.831 (2) Å | T = 294 K |
β = 94.402 (4)° | Prism, white |
V = 5241.9 (18) Å3 | 0.20 × 0.14 × 0.08 mm |
Z = 8 |
Bruker SMART CCD area-detector diffractometer | 4629 independent reflections |
Radiation source: fine-focus sealed tube | 2498 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.059 |
ϕ and ω scans | θmax = 25.0°, θmin = 0.7° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −70→70 |
Tmin = 0.725, Tmax = 1.000 | k = −3→8 |
12667 measured reflections | l = −14→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.123 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.00 | w = 1/[σ2(Fo2) + (0.0367P)2 + 5.8309P] where P = (Fo2 + 2Fc2)/3 |
4629 reflections | (Δ/σ)max = 0.002 |
321 parameters | Δρmax = 0.34 e Å−3 |
0 restraints | Δρmin = −0.28 e Å−3 |
C23H30ClN5O32+·2Cl−·0.5H2O | V = 5241.9 (18) Å3 |
Mr = 539.88 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 59.563 (12) Å | µ = 0.39 mm−1 |
b = 6.8793 (14) Å | T = 294 K |
c = 12.831 (2) Å | 0.20 × 0.14 × 0.08 mm |
β = 94.402 (4)° |
Bruker SMART CCD area-detector diffractometer | 4629 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2498 reflections with I > 2σ(I) |
Tmin = 0.725, Tmax = 1.000 | Rint = 0.059 |
12667 measured reflections |
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.123 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.00 | Δρmax = 0.34 e Å−3 |
4629 reflections | Δρmin = −0.28 e Å−3 |
321 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cl1 | 0.23396 (2) | 0.4537 (2) | −0.45468 (9) | 0.0911 (5) | |
O1 | 0.18447 (4) | 0.8711 (4) | −0.05974 (19) | 0.0462 (7) | |
O2 | 0.14878 (5) | 0.4220 (4) | 0.1843 (2) | 0.0589 (8) | |
O3 | 0.12471 (4) | 0.8338 (4) | 0.43121 (19) | 0.0515 (7) | |
N1 | 0.15913 (5) | 0.7902 (5) | 0.1069 (2) | 0.0440 (8) | |
N2 | 0.14652 (5) | 0.7590 (5) | 0.1904 (2) | 0.0448 (8) | |
N3 | 0.13558 (5) | 0.5894 (4) | 0.3246 (2) | 0.0400 (8) | |
N4 | 0.06729 (5) | 0.5843 (4) | 0.5197 (2) | 0.0337 (7) | |
N5 | 0.04067 (5) | 0.8887 (5) | 0.6061 (2) | 0.0390 (8) | |
C1 | 0.22367 (7) | 0.9011 (7) | −0.2680 (3) | 0.0650 (13) | |
H1 | 0.2290 | 1.0276 | −0.2592 | 0.078* | |
C2 | 0.23197 (7) | 0.7838 (9) | −0.3432 (3) | 0.0690 (14) | |
H2 | 0.2430 | 0.8308 | −0.3840 | 0.083* | |
C3 | 0.22404 (7) | 0.5989 (8) | −0.3580 (3) | 0.0594 (12) | |
C4 | 0.20785 (7) | 0.5277 (7) | −0.2977 (3) | 0.0630 (13) | |
H4 | 0.2023 | 0.4022 | −0.3083 | 0.076* | |
C5 | 0.19981 (7) | 0.6438 (7) | −0.2213 (3) | 0.0573 (12) | |
H5 | 0.1890 | 0.5946 | −0.1797 | 0.069* | |
C6 | 0.20750 (6) | 0.8320 (7) | −0.2054 (3) | 0.0485 (11) | |
C7 | 0.19819 (7) | 0.9568 (6) | −0.1273 (3) | 0.0478 (11) | |
C8 | 0.19909 (7) | 1.1508 (7) | −0.1081 (3) | 0.0600 (12) | |
H8 | 0.2073 | 1.2418 | −0.1429 | 0.072* | |
C9 | 0.18542 (7) | 1.1891 (7) | −0.0263 (3) | 0.0574 (12) | |
H9 | 0.1827 | 1.3098 | 0.0030 | 0.069* | |
C10 | 0.17690 (7) | 1.0172 (6) | 0.0018 (3) | 0.0452 (10) | |
C11 | 0.16305 (6) | 0.9676 (6) | 0.0845 (3) | 0.0444 (10) | |
H11 | 0.1568 | 1.0662 | 0.1225 | 0.053* | |
C12 | 0.14429 (6) | 0.5725 (6) | 0.2266 (3) | 0.0439 (10) | |
C13 | 0.13208 (6) | 0.7804 (6) | 0.3510 (3) | 0.0394 (9) | |
C14 | 0.13935 (6) | 0.9033 (5) | 0.2631 (3) | 0.0422 (10) | |
H14A | 0.1270 | 0.9805 | 0.2321 | 0.051* | |
H14B | 0.1517 | 0.9888 | 0.2867 | 0.051* | |
C15 | 0.13341 (6) | 0.4226 (6) | 0.3940 (3) | 0.0461 (10) | |
H15A | 0.1346 | 0.4677 | 0.4658 | 0.055* | |
H15B | 0.1458 | 0.3340 | 0.3857 | 0.055* | |
C16 | 0.11156 (6) | 0.3135 (6) | 0.3737 (3) | 0.0464 (10) | |
H16A | 0.1118 | 0.2014 | 0.4197 | 0.056* | |
H16B | 0.1106 | 0.2658 | 0.3024 | 0.056* | |
C17 | 0.09061 (6) | 0.4316 (6) | 0.3897 (3) | 0.0424 (10) | |
H17A | 0.0774 | 0.3566 | 0.3660 | 0.051* | |
H17B | 0.0907 | 0.5486 | 0.3475 | 0.051* | |
C18 | 0.08908 (6) | 0.4875 (6) | 0.5033 (3) | 0.0413 (10) | |
H18A | 0.0906 | 0.3719 | 0.5464 | 0.050* | |
H18B | 0.1014 | 0.5747 | 0.5248 | 0.050* | |
C19 | 0.06381 (6) | 0.5970 (6) | 0.6343 (2) | 0.0426 (10) | |
H19A | 0.0643 | 0.4676 | 0.6644 | 0.051* | |
H19B | 0.0758 | 0.6730 | 0.6695 | 0.051* | |
C20 | 0.04159 (6) | 0.6894 (6) | 0.6511 (3) | 0.0448 (10) | |
H20A | 0.0295 | 0.6113 | 0.6179 | 0.054* | |
H20B | 0.0396 | 0.6956 | 0.7253 | 0.054* | |
C21 | 0.04333 (7) | 0.8767 (6) | 0.4918 (3) | 0.0463 (10) | |
H21A | 0.0426 | 1.0061 | 0.4617 | 0.056* | |
H21B | 0.0312 | 0.8002 | 0.4581 | 0.056* | |
C22 | 0.06551 (6) | 0.7845 (5) | 0.4732 (3) | 0.0413 (10) | |
H22A | 0.0776 | 0.8647 | 0.5041 | 0.050* | |
H22B | 0.0671 | 0.7767 | 0.3987 | 0.050* | |
C23 | 0.01982 (7) | 0.9928 (7) | 0.6300 (3) | 0.0593 (12) | |
H23A | 0.0195 | 1.1188 | 0.5977 | 0.089* | |
H23B | 0.0195 | 1.0073 | 0.7043 | 0.089* | |
H23C | 0.0069 | 0.9196 | 0.6034 | 0.089* | |
Cl2 | 0.080376 (16) | 0.89703 (15) | 0.20687 (7) | 0.0483 (3) | |
Cl3 | 0.027191 (17) | 0.36360 (15) | 0.41881 (7) | 0.0530 (3) | |
H4A | 0.0538 (6) | 0.507 (5) | 0.485 (3) | 0.055 (12)* | |
H5A | 0.0542 (7) | 0.972 (6) | 0.638 (3) | 0.069 (13)* | |
O4 | 0.0000 | 0.6464 (6) | 0.2500 | 0.0960 (16) | |
H4C | −0.0016 | 0.5712 | 0.1973 | 0.115* | 0.50 |
H4B | 0.0068 | 0.5826 | 0.3011 | 0.115* | 0.50 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0934 (10) | 0.1185 (12) | 0.0647 (8) | 0.0178 (9) | 0.0280 (7) | −0.0075 (8) |
O1 | 0.0471 (16) | 0.0461 (17) | 0.0460 (15) | −0.0059 (14) | 0.0077 (13) | 0.0043 (14) |
O2 | 0.081 (2) | 0.0401 (17) | 0.0583 (18) | 0.0067 (16) | 0.0215 (15) | −0.0113 (15) |
O3 | 0.0632 (18) | 0.0497 (18) | 0.0428 (15) | 0.0052 (15) | 0.0115 (14) | −0.0118 (14) |
N1 | 0.049 (2) | 0.043 (2) | 0.0403 (18) | −0.0018 (18) | 0.0086 (16) | −0.0052 (17) |
N2 | 0.059 (2) | 0.0347 (19) | 0.0426 (18) | 0.0017 (18) | 0.0164 (16) | −0.0054 (17) |
N3 | 0.0466 (19) | 0.0356 (19) | 0.0383 (17) | 0.0059 (16) | 0.0072 (15) | −0.0029 (16) |
N4 | 0.044 (2) | 0.0320 (18) | 0.0260 (15) | 0.0009 (17) | 0.0065 (14) | 0.0021 (14) |
N5 | 0.0400 (19) | 0.037 (2) | 0.0403 (18) | −0.0005 (17) | 0.0081 (15) | −0.0068 (16) |
C1 | 0.057 (3) | 0.077 (4) | 0.062 (3) | −0.017 (3) | 0.011 (2) | 0.005 (3) |
C2 | 0.055 (3) | 0.099 (4) | 0.055 (3) | −0.012 (3) | 0.021 (2) | 0.003 (3) |
C3 | 0.053 (3) | 0.078 (4) | 0.048 (3) | 0.011 (3) | 0.009 (2) | 0.003 (3) |
C4 | 0.069 (3) | 0.065 (3) | 0.056 (3) | 0.001 (3) | 0.014 (2) | 0.010 (3) |
C5 | 0.057 (3) | 0.066 (3) | 0.051 (3) | −0.003 (3) | 0.017 (2) | 0.007 (2) |
C6 | 0.038 (2) | 0.063 (3) | 0.044 (2) | 0.000 (2) | 0.0021 (19) | 0.011 (2) |
C7 | 0.045 (3) | 0.055 (3) | 0.043 (2) | −0.007 (2) | 0.002 (2) | 0.012 (2) |
C8 | 0.063 (3) | 0.055 (3) | 0.062 (3) | −0.016 (3) | 0.004 (2) | 0.015 (3) |
C9 | 0.063 (3) | 0.049 (3) | 0.060 (3) | −0.011 (2) | 0.000 (2) | 0.000 (2) |
C10 | 0.045 (3) | 0.047 (3) | 0.043 (2) | 0.004 (2) | −0.0029 (19) | −0.003 (2) |
C11 | 0.045 (2) | 0.046 (3) | 0.041 (2) | 0.000 (2) | 0.0013 (19) | −0.003 (2) |
C12 | 0.042 (2) | 0.044 (3) | 0.046 (2) | 0.003 (2) | 0.0045 (19) | −0.002 (2) |
C13 | 0.037 (2) | 0.039 (2) | 0.043 (2) | 0.005 (2) | 0.0008 (18) | −0.004 (2) |
C14 | 0.046 (2) | 0.037 (2) | 0.044 (2) | 0.000 (2) | 0.0066 (18) | −0.008 (2) |
C15 | 0.048 (3) | 0.048 (3) | 0.043 (2) | 0.018 (2) | 0.0067 (19) | 0.008 (2) |
C16 | 0.055 (3) | 0.037 (2) | 0.049 (2) | 0.007 (2) | 0.013 (2) | −0.002 (2) |
C17 | 0.047 (2) | 0.042 (2) | 0.039 (2) | 0.001 (2) | 0.0049 (18) | −0.0055 (19) |
C18 | 0.043 (2) | 0.046 (2) | 0.036 (2) | 0.007 (2) | 0.0035 (18) | 0.0026 (19) |
C19 | 0.061 (3) | 0.043 (2) | 0.0250 (18) | 0.003 (2) | 0.0079 (17) | 0.0050 (18) |
C20 | 0.056 (3) | 0.045 (3) | 0.035 (2) | −0.007 (2) | 0.0135 (19) | −0.001 (2) |
C21 | 0.060 (3) | 0.042 (3) | 0.037 (2) | 0.007 (2) | 0.0073 (19) | −0.001 (2) |
C22 | 0.058 (3) | 0.033 (2) | 0.034 (2) | 0.002 (2) | 0.0128 (18) | 0.0069 (18) |
C23 | 0.049 (3) | 0.066 (3) | 0.064 (3) | 0.008 (2) | 0.017 (2) | −0.016 (3) |
Cl2 | 0.0508 (6) | 0.0441 (6) | 0.0489 (6) | 0.0031 (5) | −0.0043 (5) | 0.0066 (5) |
Cl3 | 0.0545 (7) | 0.0547 (7) | 0.0496 (6) | −0.0077 (6) | 0.0021 (5) | −0.0077 (5) |
O4 | 0.156 (5) | 0.046 (3) | 0.086 (3) | 0.000 | 0.014 (3) | 0.000 |
Cl1—C3 | 1.732 (4) | C9—C10 | 1.347 (5) |
O1—C7 | 1.370 (4) | C9—H9 | 0.9300 |
O1—C10 | 1.375 (4) | C10—C11 | 1.434 (5) |
O2—C12 | 1.208 (4) | C11—H11 | 0.9300 |
O3—C13 | 1.207 (4) | C13—C14 | 1.499 (5) |
N1—C11 | 1.279 (5) | C14—H14A | 0.9700 |
N1—N2 | 1.372 (4) | C14—H14B | 0.9700 |
N2—C12 | 1.374 (5) | C15—C16 | 1.507 (5) |
N2—C14 | 1.449 (4) | C15—H15A | 0.9700 |
N3—C13 | 1.376 (5) | C15—H15B | 0.9700 |
N3—C12 | 1.402 (4) | C16—C17 | 1.516 (5) |
N3—C15 | 1.464 (4) | C16—H16A | 0.9700 |
N4—C18 | 1.488 (4) | C16—H16B | 0.9700 |
N4—C22 | 1.501 (4) | C17—C18 | 1.517 (4) |
N4—C19 | 1.504 (4) | C17—H17A | 0.9700 |
N4—H4A | 1.04 (4) | C17—H17B | 0.9700 |
N5—C23 | 1.486 (4) | C18—H18A | 0.9700 |
N5—C20 | 1.487 (5) | C18—H18B | 0.9700 |
N5—C21 | 1.489 (4) | C19—C20 | 1.498 (5) |
N5—H5A | 1.05 (4) | C19—H19A | 0.9700 |
C1—C2 | 1.378 (6) | C19—H19B | 0.9700 |
C1—C6 | 1.385 (5) | C20—H20A | 0.9700 |
C1—H1 | 0.9300 | C20—H20B | 0.9700 |
C2—C3 | 1.365 (6) | C21—C22 | 1.501 (5) |
C2—H2 | 0.9300 | C21—H21A | 0.9700 |
C3—C4 | 1.372 (6) | C21—H21B | 0.9700 |
C4—C5 | 1.378 (6) | C22—H22A | 0.9700 |
C4—H4 | 0.9300 | C22—H22B | 0.9700 |
C5—C6 | 1.384 (6) | C23—H23A | 0.9600 |
C5—H5 | 0.9300 | C23—H23B | 0.9600 |
C6—C7 | 1.460 (5) | C23—H23C | 0.9600 |
C7—C8 | 1.357 (6) | O4—H4C | 0.8500 |
C8—C9 | 1.402 (5) | O4—H4B | 0.8627 |
C8—H8 | 0.9300 | ||
C7—O1—C10 | 106.7 (3) | N2—C14—H14A | 111.3 |
C11—N1—N2 | 116.5 (3) | C13—C14—H14A | 111.3 |
N1—N2—C12 | 118.9 (3) | N2—C14—H14B | 111.3 |
N1—N2—C14 | 127.0 (3) | C13—C14—H14B | 111.3 |
C12—N2—C14 | 112.4 (3) | H14A—C14—H14B | 109.2 |
C13—N3—C12 | 111.9 (3) | N3—C15—C16 | 113.7 (3) |
C13—N3—C15 | 125.2 (3) | N3—C15—H15A | 108.8 |
C12—N3—C15 | 122.4 (3) | C16—C15—H15A | 108.8 |
C18—N4—C22 | 113.0 (3) | N3—C15—H15B | 108.8 |
C18—N4—C19 | 110.6 (3) | C16—C15—H15B | 108.8 |
C22—N4—C19 | 108.9 (3) | H15A—C15—H15B | 107.7 |
C18—N4—H4A | 111 (2) | C15—C16—C17 | 114.7 (3) |
C22—N4—H4A | 106 (2) | C15—C16—H16A | 108.6 |
C19—N4—H4A | 107.1 (18) | C17—C16—H16A | 108.6 |
C23—N5—C20 | 111.8 (3) | C15—C16—H16B | 108.6 |
C23—N5—C21 | 112.6 (3) | C17—C16—H16B | 108.6 |
C20—N5—C21 | 109.1 (3) | H16A—C16—H16B | 107.6 |
C23—N5—H5A | 107 (2) | C16—C17—C18 | 112.1 (3) |
C20—N5—H5A | 110 (2) | C16—C17—H17A | 109.2 |
C21—N5—H5A | 106 (2) | C18—C17—H17A | 109.2 |
C2—C1—C6 | 120.6 (5) | C16—C17—H17B | 109.2 |
C2—C1—H1 | 119.7 | C18—C17—H17B | 109.2 |
C6—C1—H1 | 119.7 | H17A—C17—H17B | 107.9 |
C3—C2—C1 | 120.3 (4) | N4—C18—C17 | 111.5 (3) |
C3—C2—H2 | 119.9 | N4—C18—H18A | 109.3 |
C1—C2—H2 | 119.9 | C17—C18—H18A | 109.3 |
C2—C3—C4 | 120.3 (4) | N4—C18—H18B | 109.3 |
C2—C3—Cl1 | 120.2 (4) | C17—C18—H18B | 109.3 |
C4—C3—Cl1 | 119.5 (4) | H18A—C18—H18B | 108.0 |
C3—C4—C5 | 119.5 (5) | C20—C19—N4 | 110.8 (3) |
C3—C4—H4 | 120.3 | C20—C19—H19A | 109.5 |
C5—C4—H4 | 120.3 | N4—C19—H19A | 109.5 |
C4—C5—C6 | 121.2 (4) | C20—C19—H19B | 109.5 |
C4—C5—H5 | 119.4 | N4—C19—H19B | 109.5 |
C6—C5—H5 | 119.4 | H19A—C19—H19B | 108.1 |
C5—C6—C1 | 118.2 (4) | N5—C20—C19 | 110.0 (3) |
C5—C6—C7 | 120.8 (4) | N5—C20—H20A | 109.7 |
C1—C6—C7 | 120.9 (4) | C19—C20—H20A | 109.7 |
C8—C7—O1 | 109.0 (4) | N5—C20—H20B | 109.7 |
C8—C7—C6 | 133.7 (4) | C19—C20—H20B | 109.7 |
O1—C7—C6 | 117.2 (4) | H20A—C20—H20B | 108.2 |
C7—C8—C9 | 107.7 (4) | N5—C21—C22 | 109.9 (3) |
C7—C8—H8 | 126.1 | N5—C21—H21A | 109.7 |
C9—C8—H8 | 126.1 | C22—C21—H21A | 109.7 |
C10—C9—C8 | 106.7 (4) | N5—C21—H21B | 109.7 |
C10—C9—H9 | 126.7 | C22—C21—H21B | 109.7 |
C8—C9—H9 | 126.7 | H21A—C21—H21B | 108.2 |
C9—C10—O1 | 110.0 (3) | C21—C22—N4 | 111.2 (3) |
C9—C10—C11 | 131.0 (4) | C21—C22—H22A | 109.4 |
O1—C10—C11 | 118.9 (4) | N4—C22—H22A | 109.4 |
N1—C11—C10 | 121.3 (4) | C21—C22—H22B | 109.4 |
N1—C11—H11 | 119.4 | N4—C22—H22B | 109.4 |
C10—C11—H11 | 119.4 | H22A—C22—H22B | 108.0 |
O2—C12—N2 | 128.1 (4) | N5—C23—H23A | 109.5 |
O2—C12—N3 | 125.8 (4) | N5—C23—H23B | 109.5 |
N2—C12—N3 | 106.1 (3) | H23A—C23—H23B | 109.5 |
O3—C13—N3 | 124.9 (4) | N5—C23—H23C | 109.5 |
O3—C13—C14 | 127.9 (4) | H23A—C23—H23C | 109.5 |
N3—C13—C14 | 107.2 (3) | H23B—C23—H23C | 109.5 |
N2—C14—C13 | 102.4 (3) | H4C—O4—H4B | 108.2 |
C11—N1—N2—C12 | −171.5 (4) | N1—N2—C12—N3 | 166.0 (3) |
C11—N1—N2—C14 | −7.7 (5) | C14—N2—C12—N3 | −0.1 (4) |
C6—C1—C2—C3 | 1.1 (7) | C13—N3—C12—O2 | −179.5 (4) |
C1—C2—C3—C4 | −0.4 (7) | C15—N3—C12—O2 | 7.6 (6) |
C1—C2—C3—Cl1 | 178.4 (3) | C13—N3—C12—N2 | 0.5 (4) |
C2—C3—C4—C5 | −0.6 (7) | C15—N3—C12—N2 | −172.3 (3) |
Cl1—C3—C4—C5 | −179.4 (3) | C12—N3—C13—O3 | −180.0 (4) |
C3—C4—C5—C6 | 1.0 (7) | C15—N3—C13—O3 | −7.4 (6) |
C4—C5—C6—C1 | −0.4 (6) | C12—N3—C13—C14 | −0.7 (4) |
C4—C5—C6—C7 | 177.3 (4) | C15—N3—C13—C14 | 171.9 (3) |
C2—C1—C6—C5 | −0.7 (6) | N1—N2—C14—C13 | −165.1 (3) |
C2—C1—C6—C7 | −178.4 (4) | C12—N2—C14—C13 | −0.3 (4) |
C10—O1—C7—C8 | 0.1 (4) | N3—C13—C14—N2 | 0.6 (4) |
C10—O1—C7—C6 | −176.9 (3) | C13—N3—C15—C16 | 100.9 (4) |
C5—C6—C7—C8 | −165.5 (5) | C12—N3—C15—C16 | −87.3 (4) |
C1—C6—C7—C8 | 12.2 (7) | N3—C15—C16—C17 | −61.7 (4) |
C5—C6—C7—O1 | 10.5 (6) | C15—C16—C17—C18 | −66.6 (4) |
C1—C6—C7—O1 | −171.9 (4) | C22—N4—C18—C17 | −70.6 (4) |
O1—C7—C8—C9 | −0.4 (5) | C19—N4—C18—C17 | 167.0 (3) |
C6—C7—C8—C9 | 175.8 (4) | C16—C17—C18—N4 | −173.7 (3) |
C7—C8—C9—C10 | 0.6 (5) | C18—N4—C19—C20 | −178.4 (3) |
C8—C9—C10—O1 | −0.6 (5) | C22—N4—C19—C20 | 56.9 (4) |
C8—C9—C10—C11 | 175.8 (4) | C23—N5—C20—C19 | −174.5 (3) |
C7—O1—C10—C9 | 0.3 (4) | C21—N5—C20—C19 | 60.4 (4) |
C7—O1—C10—C11 | −176.6 (3) | N4—C19—C20—N5 | −59.7 (4) |
N2—N1—C11—C10 | 177.1 (3) | C23—N5—C21—C22 | 175.5 (3) |
C9—C10—C11—N1 | −170.6 (4) | C20—N5—C21—C22 | −59.8 (4) |
O1—C10—C11—N1 | 5.5 (6) | N5—C21—C22—N4 | 58.8 (4) |
N1—N2—C12—O2 | −13.9 (6) | C18—N4—C22—C21 | −179.9 (3) |
C14—N2—C12—O2 | 179.9 (4) | C19—N4—C22—C21 | −56.6 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H4B···Cl3 | 0.86 | 2.40 | 3.250 (3) | 169 |
O4—H4C···Cl3i | 0.85 | 2.50 | 3.250 (3) | 148 |
N5—H5A···Cl2ii | 1.05 (4) | 1.95 (4) | 2.995 (3) | 174 (3) |
N4—H4A···Cl3 | 1.04 (4) | 2.00 (4) | 3.035 (3) | 178 (3) |
Symmetry codes: (i) −x, y, −z+1/2; (ii) x, −y+2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C23H30ClN5O32+·2Cl−·0.5H2O |
Mr | 539.88 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 294 |
a, b, c (Å) | 59.563 (12), 6.8793 (14), 12.831 (2) |
β (°) | 94.402 (4) |
V (Å3) | 5241.9 (18) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.39 |
Crystal size (mm) | 0.20 × 0.14 × 0.08 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.725, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12667, 4629, 2498 |
Rint | 0.059 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.123, 1.00 |
No. of reflections | 4629 |
No. of parameters | 321 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.34, −0.28 |
Computer programs: SMART (Bruker, 1997), SAINT (Bruker, 1997), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H4B···Cl3 | 0.86 | 2.40 | 3.250 (3) | 169 |
O4—H4C···Cl3i | 0.85 | 2.50 | 3.250 (3) | 148 |
N5—H5A···Cl2ii | 1.05 (4) | 1.95 (4) | 2.995 (3) | 174 (3) |
N4—H4A···Cl3 | 1.04 (4) | 2.00 (4) | 3.035 (3) | 178 (3) |
Symmetry codes: (i) −x, y, −z+1/2; (ii) x, −y+2, z+1/2. |
Acknowledgements
The authors thank Mr Hai-Bin Song at Nankai University for the X-ray crystallographic determination and helpful suggestions.
References
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19. CrossRef Web of Science Google Scholar
Bruker (1997). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Matson, P. A., Godlewski, M. S., Quorroz, D. & Guggisberg, Y. (1999). WO Patent 9 955 700. Google Scholar
Pratt, C. M., Singh, S. N., Al-Khalidi, H. R., Brum, J. M., Holroyde, M. J., Marcello, S. R., Schwartz, P. J. & Camm, A. J. (2004). J. Am. Coll. Cardiol. 43, 1211–1216. Web of Science CrossRef PubMed CAS Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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The compound, 1-[[[5-(4-chlorophenyl)-2-furanyl]methylene]amino]-3- [4-(4-methyl-1-piperazinyl)butyl]-2, 4-imidazolidinedione dihydrochloride (Azimilide dihydrochloride), (I), is a Vaughan-Williamsclass III antiarrhythmic drug, which is being developed primarily for atrial fibrillation and also as adjunctive antiarrhythmic therapy in patients with implantable cardioverter defibrillators (Pratt et al., 2004). Now, we present the crystal structure of the title compound (Fig. 1).
All bond lengths and angles in (I) are within normal ranges (Allen et al., 1987) except for the N—H bonds involved in hydrogen bonds with charged donors N4—H4A (1.04 Å) and N5—H5A (1.05 Å)of piperazonia ring, and also chloride ions Cl2- and Cl3- as the acceptors. In the crystal, the imidazolidine-2,4-dione ring (C12/C13/C14/N2/N3/O2/O3) is planar with the r.m.s. deviation of 0.0029 Å. The dihedral angle formed between the imidazolidine-2,4-dione ring plane (A), the benzene ring plane (C1 to C6, B) and the furan ring plane (C7/C8/C9/C10/O1, C) are 28.67 (15) ° (A/B), 12.06 (3) ° (B/C) and 18.73 (18) ° (A/C), respectively. The piperazonia ring adopts a chair conformation. The packing is stabilized by intermolecular O—H···Cl and N—H···Cl hydrogen bonds (Table 1 and Fig. 2).