organic compounds
11,12-Dihydroxy-10,6,8,11,13-icetexapentan-1-one
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bCrystal Materials Research Unit, Department of Chemistry, Faculty of Science, Prince of Songkla University, Hat-Yai, Songkhla 90112, Thailand
*Correspondence e-mail: hkfun@usm.my
The title compound [systematic name: 14,15-dihydroxy-7,7-dimethyl-13-(propan-2-yl)tricyclo[9.4.0.03,8]pentadeca-1(11),3(8),9,12,14-pentaen-4-one], C20H24O3, is a new icetexane diterpenoid which was isolated from the roots of Premna obtusifolia (Verbenaceae). The molecule has three fused rings: a cyclohexenone, a central cycloheptene and a benzene ring. The cyclohexenone ring is in an whereas the cycloheptene ring is in a twisted boat conformation. Intramolecular O—H⋯O hydrogen bonds generate S(5) and S(8) ring motifs. In the crystal, molecules are linked into dimers through O—H⋯O hydrogen bonds. These dimers are arranged in to sheets parallel to the ac plane. C—H⋯O and weak C—H⋯π interactions are also present.
Related literature
For details of hydrogen-bond motifs, see: Bernstein et al. (1995) and for ring conformations, see: Cremer & Pople (1975). For bond-length data, see: Allen et al. (1987). For background to Verbenaceae plants and the bioactivity of icetexane, see: Bunluepuech & Tewtrakul (2009); Hymavathi et al. (2009); Simmons & Sarpong (2009). For related structures, see: Asik et al. (2010); Razak et al. (2010). For the stability of the temperature controller used in the data collection, see Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536810053754/ng5091sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536810053754/ng5091Isup2.hkl
The air-dried roots of premna obtusifolia (4.5 kg) were extracted with hexane (2 x 20 L) at room temperature. The combined extracts were concentrated under reduced pressure to afford a dark yellow extract (40.0 g) which was subjected to quick
(QCC) over silica gel using solvents of increasing polarity from n-hexane to EtOAc to afford 7 fractions (F1—F7). Fraction F6 was further purified by quick (QCC) using n-hexane-ETOAc (9:1), yielding the title compound (87.3 mg). Yellow needle-shaped single crystals of the title compound suitable for x-ray were recrystallized from n-hexane after several days.All H atoms were located in a difference maps and isotropically refined. A rotating group model was used for the methyl groups. The highest residual electron density peak is located at 0.64 Å from C8 and the deepest hole is located at 1.04 Å from C10.
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The structure of (I), showing 50% probability displacement ellipsoids and the atom-numbering scheme. Intramolecular O—H···O hydrogen bonds are shown as dashed lines. | |
Fig. 2. The crystal packing of (I) viewed along the b axis, showing sheets parallel to the ac plane. Hydrogen bonds are shown as dashed lines. |
C20H24O3 | F(000) = 1344 |
Mr = 312.39 | Dx = 1.236 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 7404 reflections |
a = 25.1090 (9) Å | θ = 2.3–35.0° |
b = 9.4317 (3) Å | µ = 0.08 mm−1 |
c = 14.9609 (4) Å | T = 100 K |
β = 108.683 (2)° | Needle, yellow |
V = 3356.35 (19) Å3 | 0.60 × 0.32 × 0.28 mm |
Z = 8 |
Bruker APEXII CCD area-detector diffractometer | 7404 independent reflections |
Radiation source: sealed tube | 6198 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.029 |
ϕ and ω scans | θmax = 35.0°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −38→40 |
Tmin = 0.953, Tmax = 0.977 | k = −14→15 |
60861 measured reflections | l = −24→24 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.125 | All H-atom parameters refined |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0755P)2 + 1.0087P] where P = (Fo2 + 2Fc2)/3 |
7404 reflections | (Δ/σ)max = 0.001 |
304 parameters | Δρmax = 0.48 e Å−3 |
0 restraints | Δρmin = −0.21 e Å−3 |
C20H24O3 | V = 3356.35 (19) Å3 |
Mr = 312.39 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 25.1090 (9) Å | µ = 0.08 mm−1 |
b = 9.4317 (3) Å | T = 100 K |
c = 14.9609 (4) Å | 0.60 × 0.32 × 0.28 mm |
β = 108.683 (2)° |
Bruker APEXII CCD area-detector diffractometer | 7404 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 6198 reflections with I > 2σ(I) |
Tmin = 0.953, Tmax = 0.977 | Rint = 0.029 |
60861 measured reflections |
R[F2 > 2σ(F2)] = 0.042 | 0 restraints |
wR(F2) = 0.125 | All H-atom parameters refined |
S = 1.03 | Δρmax = 0.48 e Å−3 |
7404 reflections | Δρmin = −0.21 e Å−3 |
304 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.34135 (2) | 0.18997 (7) | 0.45441 (4) | 0.02727 (13) | |
O2 | 0.22121 (2) | 0.14713 (6) | 0.42998 (3) | 0.02042 (11) | |
H1O2 | 0.2573 (7) | 0.1602 (17) | 0.4448 (11) | 0.048 (4)* | |
O3 | 0.11523 (2) | 0.24175 (6) | 0.35038 (3) | 0.01917 (10) | |
H1O3 | 0.1377 (6) | 0.2421 (15) | 0.4088 (10) | 0.041 (4)* | |
C1 | 0.35660 (3) | 0.18067 (8) | 0.38355 (5) | 0.02009 (13) | |
C2 | 0.40308 (3) | 0.27126 (10) | 0.37203 (6) | 0.02604 (15) | |
H2A | 0.4322 (6) | 0.2867 (15) | 0.4357 (10) | 0.038 (3)* | |
H2B | 0.3867 (6) | 0.3655 (16) | 0.3534 (10) | 0.040 (3)* | |
C3 | 0.42779 (3) | 0.20818 (9) | 0.30042 (6) | 0.02461 (14) | |
H3A | 0.4475 (5) | 0.1170 (14) | 0.3235 (9) | 0.031 (3)* | |
H3B | 0.4575 (6) | 0.2728 (14) | 0.2903 (9) | 0.035 (3)* | |
C4 | 0.38338 (3) | 0.17810 (8) | 0.20403 (5) | 0.01959 (12) | |
C5 | 0.33387 (3) | 0.09795 (7) | 0.21853 (5) | 0.01718 (11) | |
C6 | 0.29158 (3) | 0.04077 (8) | 0.13478 (5) | 0.02060 (13) | |
H6A | 0.3058 (5) | 0.0138 (14) | 0.0831 (9) | 0.030 (3)* | |
C7 | 0.23475 (3) | 0.03856 (8) | 0.11708 (5) | 0.02164 (13) | |
H7A | 0.2123 (5) | 0.0114 (13) | 0.0533 (8) | 0.027 (3)* | |
C8 | 0.20317 (3) | 0.08458 (7) | 0.17837 (4) | 0.01703 (11) | |
C9 | 0.22671 (3) | 0.07722 (7) | 0.27714 (4) | 0.01548 (11) | |
C10 | 0.32690 (3) | 0.08736 (7) | 0.30526 (4) | 0.01682 (11) | |
C11 | 0.19897 (3) | 0.14125 (7) | 0.33345 (4) | 0.01495 (11) | |
C12 | 0.14429 (3) | 0.19365 (7) | 0.29375 (4) | 0.01505 (11) | |
C13 | 0.11813 (3) | 0.19232 (7) | 0.19542 (4) | 0.01734 (11) | |
C14 | 0.14864 (3) | 0.14018 (8) | 0.13931 (5) | 0.01940 (12) | |
H14A | 0.1327 (5) | 0.1435 (13) | 0.0691 (8) | 0.029 (3)* | |
C15 | 0.05752 (3) | 0.24151 (8) | 0.15458 (5) | 0.02181 (13) | |
H15A | 0.0487 (6) | 0.3020 (16) | 0.2035 (10) | 0.043 (4)* | |
C16 | 0.01786 (3) | 0.11352 (11) | 0.13660 (7) | 0.03109 (18) | |
H16A | 0.0246 (6) | 0.0563 (16) | 0.0858 (10) | 0.041 (3)* | |
H16B | −0.0208 (6) | 0.1452 (14) | 0.1209 (10) | 0.038 (3)* | |
H16C | 0.0246 (6) | 0.0539 (16) | 0.1939 (10) | 0.043 (4)* | |
C17 | 0.04657 (4) | 0.32889 (10) | 0.06447 (7) | 0.03084 (17) | |
H17A | 0.0749 (7) | 0.4078 (17) | 0.0732 (11) | 0.051 (4)* | |
H17B | 0.0075 (6) | 0.3743 (15) | 0.0475 (10) | 0.040 (3)* | |
H17C | 0.0477 (6) | 0.2691 (16) | 0.0078 (10) | 0.043 (4)* | |
C18 | 0.41211 (4) | 0.08869 (9) | 0.14665 (6) | 0.02682 (15) | |
H18A | 0.3865 (6) | 0.0729 (15) | 0.0807 (10) | 0.036 (3)* | |
H18B | 0.4239 (6) | −0.0029 (16) | 0.1787 (9) | 0.039 (3)* | |
H18C | 0.4464 (5) | 0.1393 (14) | 0.1442 (9) | 0.034 (3)* | |
C19 | 0.36195 (4) | 0.31667 (9) | 0.15095 (7) | 0.03147 (17) | |
H19A | 0.3940 (6) | 0.3712 (17) | 0.1398 (11) | 0.048 (4)* | |
H19B | 0.3440 (6) | 0.3764 (17) | 0.1896 (10) | 0.045 (4)* | |
H19C | 0.3354 (6) | 0.2977 (15) | 0.0893 (10) | 0.037 (3)* | |
C20 | 0.28082 (3) | −0.00267 (7) | 0.31829 (5) | 0.01867 (12) | |
H20A | 0.2799 (5) | −0.0936 (12) | 0.2844 (8) | 0.022 (3)* | |
H20B | 0.2880 (4) | −0.0209 (12) | 0.3870 (8) | 0.022 (2)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0226 (2) | 0.0428 (3) | 0.0156 (2) | 0.0040 (2) | 0.00490 (18) | −0.0048 (2) |
O2 | 0.0181 (2) | 0.0313 (3) | 0.01191 (19) | 0.00406 (19) | 0.00491 (16) | 0.00394 (17) |
O3 | 0.0166 (2) | 0.0264 (2) | 0.0148 (2) | 0.00275 (17) | 0.00536 (16) | −0.00128 (17) |
C1 | 0.0154 (3) | 0.0273 (3) | 0.0159 (3) | 0.0042 (2) | 0.0026 (2) | −0.0018 (2) |
C2 | 0.0178 (3) | 0.0336 (4) | 0.0254 (3) | −0.0039 (3) | 0.0051 (2) | −0.0100 (3) |
C3 | 0.0174 (3) | 0.0287 (4) | 0.0284 (3) | −0.0002 (2) | 0.0082 (2) | −0.0037 (3) |
C4 | 0.0206 (3) | 0.0185 (3) | 0.0220 (3) | 0.0002 (2) | 0.0100 (2) | −0.0002 (2) |
C5 | 0.0178 (3) | 0.0177 (3) | 0.0167 (2) | 0.0012 (2) | 0.0065 (2) | −0.0009 (2) |
C6 | 0.0210 (3) | 0.0246 (3) | 0.0174 (3) | 0.0002 (2) | 0.0078 (2) | −0.0051 (2) |
C7 | 0.0210 (3) | 0.0267 (3) | 0.0172 (3) | 0.0002 (2) | 0.0061 (2) | −0.0069 (2) |
C8 | 0.0169 (2) | 0.0185 (3) | 0.0154 (2) | −0.0007 (2) | 0.0048 (2) | −0.0037 (2) |
C9 | 0.0155 (2) | 0.0155 (2) | 0.0158 (2) | 0.00006 (19) | 0.00547 (19) | 0.00067 (19) |
C10 | 0.0154 (2) | 0.0197 (3) | 0.0151 (2) | 0.0027 (2) | 0.00442 (19) | 0.0006 (2) |
C11 | 0.0157 (2) | 0.0166 (2) | 0.0127 (2) | 0.00038 (19) | 0.00469 (18) | 0.00190 (19) |
C12 | 0.0152 (2) | 0.0160 (2) | 0.0140 (2) | −0.00001 (19) | 0.00473 (19) | −0.00030 (18) |
C13 | 0.0156 (2) | 0.0200 (3) | 0.0147 (2) | 0.0005 (2) | 0.00235 (19) | −0.0028 (2) |
C14 | 0.0182 (3) | 0.0241 (3) | 0.0143 (2) | −0.0001 (2) | 0.0030 (2) | −0.0046 (2) |
C15 | 0.0183 (3) | 0.0285 (3) | 0.0157 (3) | 0.0051 (2) | 0.0013 (2) | −0.0036 (2) |
C16 | 0.0164 (3) | 0.0421 (5) | 0.0334 (4) | −0.0012 (3) | 0.0060 (3) | 0.0097 (3) |
C17 | 0.0259 (4) | 0.0298 (4) | 0.0305 (4) | 0.0017 (3) | 0.0002 (3) | 0.0083 (3) |
C18 | 0.0278 (3) | 0.0259 (3) | 0.0338 (4) | −0.0016 (3) | 0.0198 (3) | −0.0033 (3) |
C19 | 0.0345 (4) | 0.0222 (3) | 0.0384 (4) | 0.0030 (3) | 0.0126 (4) | 0.0088 (3) |
C20 | 0.0184 (3) | 0.0186 (3) | 0.0201 (3) | 0.0032 (2) | 0.0077 (2) | 0.0038 (2) |
O1—C1 | 1.2403 (9) | C9—C20 | 1.5022 (9) |
O2—C11 | 1.3725 (8) | C10—C20 | 1.4976 (9) |
O2—H1O2 | 0.869 (16) | C11—C12 | 1.3998 (9) |
O3—C12 | 1.3610 (8) | C12—C13 | 1.4058 (9) |
O3—H1O3 | 0.875 (14) | C13—C14 | 1.3948 (9) |
C1—C10 | 1.4638 (10) | C13—C15 | 1.5196 (9) |
C1—C2 | 1.5003 (11) | C14—H14A | 0.997 (12) |
C2—C3 | 1.5208 (11) | C15—C17 | 1.5280 (12) |
C2—H2A | 1.008 (14) | C15—C16 | 1.5329 (12) |
C2—H2B | 0.982 (15) | C15—H15A | 1.006 (15) |
C3—C4 | 1.5406 (11) | C16—H16A | 0.989 (14) |
C3—H3A | 0.996 (13) | C16—H16B | 0.969 (14) |
C3—H3B | 1.011 (13) | C16—H16C | 0.993 (15) |
C4—C5 | 1.5286 (10) | C17—H17A | 1.008 (16) |
C4—C19 | 1.5345 (11) | C17—H17B | 1.026 (14) |
C4—C18 | 1.5379 (10) | C17—H17C | 1.026 (15) |
C5—C10 | 1.3674 (9) | C18—H18A | 1.001 (13) |
C5—C6 | 1.4615 (10) | C18—H18B | 0.987 (15) |
C6—C7 | 1.3655 (10) | C18—H18C | 0.996 (13) |
C6—H6A | 0.984 (12) | C19—H19A | 1.013 (15) |
C7—C8 | 1.4574 (9) | C19—H19B | 1.011 (15) |
C7—H7A | 0.975 (12) | C19—H19C | 0.966 (14) |
C8—C9 | 1.4065 (9) | C20—H20A | 0.993 (11) |
C8—C14 | 1.4068 (9) | C20—H20B | 1.000 (11) |
C9—C11 | 1.3912 (9) | ||
C11—O2—H1O2 | 108.3 (10) | O3—C12—C13 | 119.36 (6) |
C12—O3—H1O3 | 108.7 (9) | C11—C12—C13 | 120.46 (6) |
O1—C1—C10 | 120.59 (7) | C14—C13—C12 | 118.06 (6) |
O1—C1—C2 | 121.49 (7) | C14—C13—C15 | 122.54 (6) |
C10—C1—C2 | 117.78 (6) | C12—C13—C15 | 119.35 (6) |
C1—C2—C3 | 111.47 (6) | C13—C14—C8 | 122.04 (6) |
C1—C2—H2A | 109.2 (8) | C13—C14—H14A | 120.7 (7) |
C3—C2—H2A | 112.7 (8) | C8—C14—H14A | 117.3 (7) |
C1—C2—H2B | 106.1 (8) | C13—C15—C17 | 113.17 (6) |
C3—C2—H2B | 112.5 (8) | C13—C15—C16 | 109.93 (6) |
H2A—C2—H2B | 104.4 (11) | C17—C15—C16 | 110.29 (6) |
C2—C3—C4 | 113.28 (6) | C13—C15—H15A | 107.8 (8) |
C2—C3—H3A | 111.3 (7) | C17—C15—H15A | 108.4 (9) |
C4—C3—H3A | 107.2 (7) | C16—C15—H15A | 107.0 (9) |
C2—C3—H3B | 110.9 (7) | C15—C16—H16A | 107.6 (8) |
C4—C3—H3B | 108.5 (7) | C15—C16—H16B | 110.0 (8) |
H3A—C3—H3B | 105.3 (10) | H16A—C16—H16B | 112.7 (11) |
C5—C4—C19 | 109.16 (6) | C15—C16—H16C | 111.9 (8) |
C5—C4—C18 | 110.87 (6) | H16A—C16—H16C | 109.3 (12) |
C19—C4—C18 | 109.12 (7) | H16B—C16—H16C | 105.3 (11) |
C5—C4—C3 | 109.63 (6) | C15—C17—H17A | 111.3 (9) |
C19—C4—C3 | 110.87 (7) | C15—C17—H17B | 109.3 (8) |
C18—C4—C3 | 107.17 (6) | H17A—C17—H17B | 107.7 (12) |
C10—C5—C6 | 120.53 (6) | C15—C17—H17C | 112.8 (8) |
C10—C5—C4 | 121.86 (6) | H17A—C17—H17C | 108.0 (12) |
C6—C5—C4 | 117.47 (6) | H17B—C17—H17C | 107.6 (11) |
C7—C6—C5 | 126.80 (6) | C4—C18—H18A | 111.3 (8) |
C7—C6—H6A | 117.7 (7) | C4—C18—H18B | 109.3 (8) |
C5—C6—H6A | 114.9 (7) | H18A—C18—H18B | 110.3 (11) |
C6—C7—C8 | 128.23 (6) | C4—C18—H18C | 108.9 (8) |
C6—C7—H7A | 115.8 (7) | H18A—C18—H18C | 109.0 (10) |
C8—C7—H7A | 115.7 (7) | H18B—C18—H18C | 108.0 (11) |
C9—C8—C14 | 118.71 (6) | C4—C19—H19A | 110.6 (9) |
C9—C8—C7 | 121.08 (6) | C4—C19—H19B | 109.0 (9) |
C14—C8—C7 | 120.20 (6) | H19A—C19—H19B | 109.6 (12) |
C11—C9—C8 | 119.44 (6) | C4—C19—H19C | 110.9 (8) |
C11—C9—C20 | 122.14 (6) | H19A—C19—H19C | 106.1 (12) |
C8—C9—C20 | 118.41 (6) | H19B—C19—H19C | 110.6 (12) |
C5—C10—C1 | 121.89 (6) | C10—C20—C9 | 107.30 (5) |
C5—C10—C20 | 120.26 (6) | C10—C20—H20A | 108.4 (6) |
C1—C10—C20 | 116.97 (6) | C9—C20—H20A | 110.8 (6) |
O2—C11—C9 | 122.74 (6) | C10—C20—H20B | 109.8 (6) |
O2—C11—C12 | 116.45 (5) | C9—C20—H20B | 110.4 (6) |
C9—C11—C12 | 120.63 (6) | H20A—C20—H20B | 110.1 (9) |
O3—C12—C11 | 120.14 (5) | ||
O1—C1—C2—C3 | 160.07 (7) | O1—C1—C10—C20 | −4.42 (10) |
C10—C1—C2—C3 | −24.13 (10) | C2—C1—C10—C20 | 179.74 (6) |
C1—C2—C3—C4 | 54.32 (9) | C8—C9—C11—O2 | −175.30 (6) |
C2—C3—C4—C5 | −48.51 (9) | C20—C9—C11—O2 | 5.92 (10) |
C2—C3—C4—C19 | 72.08 (9) | C8—C9—C11—C12 | 9.76 (9) |
C2—C3—C4—C18 | −168.92 (7) | C20—C9—C11—C12 | −169.02 (6) |
C19—C4—C5—C10 | −108.14 (8) | O2—C11—C12—O3 | −2.53 (9) |
C18—C4—C5—C10 | 131.62 (7) | C9—C11—C12—O3 | 172.71 (6) |
C3—C4—C5—C10 | 13.49 (9) | O2—C11—C12—C13 | 179.82 (6) |
C19—C4—C5—C6 | 67.64 (8) | C9—C11—C12—C13 | −4.93 (10) |
C18—C4—C5—C6 | −52.61 (8) | O3—C12—C13—C14 | −178.92 (6) |
C3—C4—C5—C6 | −170.74 (6) | C11—C12—C13—C14 | −1.26 (10) |
C10—C5—C6—C7 | 35.04 (12) | O3—C12—C13—C15 | −1.36 (10) |
C4—C5—C6—C7 | −140.79 (8) | C11—C12—C13—C15 | 176.30 (6) |
C5—C6—C7—C8 | −3.68 (14) | C12—C13—C14—C8 | 2.58 (11) |
C6—C7—C8—C9 | −29.82 (12) | C15—C13—C14—C8 | −174.89 (7) |
C6—C7—C8—C14 | 148.89 (8) | C9—C8—C14—C13 | 2.18 (10) |
C14—C8—C9—C11 | −8.32 (10) | C7—C8—C14—C13 | −176.55 (7) |
C7—C8—C9—C11 | 170.41 (6) | C14—C13—C15—C17 | −42.19 (10) |
C14—C8—C9—C20 | 170.51 (6) | C12—C13—C15—C17 | 140.37 (7) |
C7—C8—C9—C20 | −10.77 (9) | C14—C13—C15—C16 | 81.62 (9) |
C6—C5—C10—C1 | −159.14 (6) | C12—C13—C15—C16 | −95.82 (8) |
C4—C5—C10—C1 | 16.50 (10) | C5—C10—C20—C9 | −75.85 (8) |
C6—C5—C10—C20 | 9.77 (10) | C1—C10—C20—C9 | 93.60 (7) |
C4—C5—C10—C20 | −174.58 (6) | C11—C9—C20—C10 | −106.68 (7) |
O1—C1—C10—C5 | 164.85 (7) | C8—C9—C20—C10 | 74.52 (7) |
C2—C1—C10—C5 | −10.99 (10) |
Cg1 is the centroid of C8–C9/C11–C14 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···O1 | 0.870 (18) | 2.088 (18) | 2.9479 (8) | 169.8 (15) |
O2—H1O2···O2i | 0.870 (18) | 2.541 (16) | 2.8818 (7) | 104.3 (12) |
O3—H1O3···O2 | 0.875 (14) | 2.208 (16) | 2.6955 (7) | 114.9 (12) |
O3—H1O3···O1i | 0.875 (14) | 2.046 (14) | 2.8448 (7) | 151.3 (14) |
C7—H7A···O2ii | 0.974 (12) | 2.440 (12) | 3.2262 (9) | 137.5 (10) |
C15—H15A···O3 | 1.007 (15) | 2.364 (15) | 2.8216 (8) | 106.6 (10) |
C18—H18B···O3iii | 0.986 (15) | 2.585 (15) | 3.3467 (10) | 134.1 (11) |
C19—H19B···Cg1ii | 1.011 (15) | 2.798 (16) | 3.7130 (10) | 150.8 (12) |
C20—H20A···Cg1iv | 0.993 (11) | 2.847 (12) | 3.7506 (8) | 151.6 (9) |
Symmetry codes: (i) −x+1/2, −y+1/2, −z+1; (ii) x, −y, z−1/2; (iii) −x+1/2, y−1/2, −z+1/2; (iv) x, −y−1, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C20H24O3 |
Mr | 312.39 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 100 |
a, b, c (Å) | 25.1090 (9), 9.4317 (3), 14.9609 (4) |
β (°) | 108.683 (2) |
V (Å3) | 3356.35 (19) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.60 × 0.32 × 0.28 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.953, 0.977 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 60861, 7404, 6198 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.807 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.125, 1.03 |
No. of reflections | 7404 |
No. of parameters | 304 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.48, −0.21 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
Cg1 is the centroid of C8–C9/C11–C14 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···O1 | 0.870 (18) | 2.088 (18) | 2.9479 (8) | 169.8 (15) |
O2—H1O2···O2i | 0.870 (18) | 2.541 (16) | 2.8818 (7) | 104.3 (12) |
O3—H1O3···O2 | 0.875 (14) | 2.208 (16) | 2.6955 (7) | 114.9 (12) |
O3—H1O3···O1i | 0.875 (14) | 2.046 (14) | 2.8448 (7) | 151.3 (14) |
C7—H7A···O2ii | 0.974 (12) | 2.440 (12) | 3.2262 (9) | 137.5 (10) |
C15—H15A···O3 | 1.007 (15) | 2.364 (15) | 2.8216 (8) | 106.6 (10) |
C18—H18B···O3iii | 0.986 (15) | 2.585 (15) | 3.3467 (10) | 134.1 (11) |
C19—H19B···Cg1ii | 1.011 (15) | 2.798 (16) | 3.7130 (10) | 150.8 (12) |
C20—H20A···Cg1iv | 0.993 (11) | 2.847 (12) | 3.7506 (8) | 151.6 (9) |
Symmetry codes: (i) −x+1/2, −y+1/2, −z+1; (ii) x, −y, z−1/2; (iii) −x+1/2, y−1/2, −z+1/2; (iv) x, −y−1, z−1/2. |
Acknowledgements
SC and AWS thank the Prince of Songkla University for financial support. The authors thank Universiti Sains Malaysia for the Research University grant No. 1001/PFIZIK/811151.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The extracts of Verbenaceae plants have been found to possess anti-HIV-1 integrase activity (Bunluepuech & Tewtrakul, 2009). Premna obtusifolia (Verbenaceae), a small tree found in the mangrove forests, is one of the Verbenaceae plants. As part of our research on bioactive compounds from medicinal plants, we previouly reported the crystal structures of diterpenoids from the roots of Premna obtusifolia (Verbenaceae) which was collected from Satun province in the southern of Thailand (Asik et al., 2010; Razak et al., 2010). The title icetexane diterpenoid (I), also named as Obtusin N, is a new compound which was isolated from the same plant. The icetexane diterpenoids encompass a variety of bioactive and structurally interesting compounds (Hymavathi et al., 2009; Simmons & Sarpong, 2009). We herein report the crystal structure of (I).
The molecule of (I) has a tricyclic skeleton (Fig. 1). The cyclohexene ring (C1–C5/C10) is in an envelope conformation with the puckering C3 atom having a deviation of 0.3373 (9) Å and puckering parameters Q = 0.4877 (9) Å, θ = 65.14 (19)° and ϕ = 113.04 (11)° (Cremer & Pople, 1975) whereas the central cycloheptene ring (C5–C10/C20) is in twisted-boat conformation with the most puckering atom C20 having deviation of 0.5665 (8) Å and puckering parameter Q = 0.8294 (8) Å. The benzene ring (C8–C9/C11–C14) is slightly twisted with the maximum deviation of -0.0575 (7) and 0.0388 (7) Å for atoms C9 and C11, respectively. The two hydroxy groups are co-planar with the attached benzene ring with r.m.s. deviation of 0.026 (7) Å. The orientation of the propanyl group is described by the torsion angles C14–C13–C15–C16 = 81.62 (9)° and C14–C13–C15–C17 = -42.19 (10)°. Intramolecular O3—H1O3···O2 and O2—H1O2···O1 hydrogen bonds (Table 1) generate S(5) and S(8) ring motifs, respectively (Fig. 1) (Bernstein et al., 1995). The bond distances in (I) are within normal ranges (Allen et al., 1987) and comparable to the related structures (Asik et al., 2010; Razak et al., 2010).
The crystal packing of (I) is stabilized by intermolecular O—H···O hydrogen bonds, C—H···O and C—H···π weak interactions (Fig. 2 and Table 1). The molecules are linked into dimers through O3—H1O3···O1 hydrogen bonds (Table 1 and Fig. 2). These dimers are arranged into sheets parallel to the ac plane. C—H···π weak interactions were presented (Table 1).