organic compounds
tert-Butyl 2-(4-nitrophenoxy)acetate
aH.E.J. Research Institute of Chemistry, International Center for Chemical and Biological Sciences, University of Karachi, Karachi 7527, Pakistan, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: seikweng@um.edu.my
In the title molecule, C12H15NO5, the nitrophenoxy portion is approximately planar (r.m.s. deviation = 0.034 Å) and makes an angle of 84.8 (1)° with respect to the –CH2–C(=O)–O–C fragment. In the crystal, π–π stacking is observed between nearly parallel benzene rings of adjacent molecules, the centroid–centroid distance being 3.6806 (10) Å. Weak intermolecular C—H⋯O hydrogen bonding is present in the crystal structure.
Related literature
For a study of the biopotency of the title compound, see: Arfan et al. (2010). For related structures, see: Ali et al. (2010); Mustafa et al. (2009).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Agilent, 2010); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536811003229/xu5151sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811003229/xu5151Isup2.hkl
4-Nitrophenol (1 g, 7 mmol) was dissolved in acetone (25 ml). To the solution was added potassium carbonate (2 g, 14 mmol). t-Butyl bromoacetate (2 ml, 14 mmol) was added amd the mixture heated for 3 hurs. The solvent was evaporated and the residue was dissolved in a mixture of water (50 ml) and ethyl acetate (50 ml). The aqueous layer was extracted three times with ethyl acetate. The combined organic phases were evaporated under reduced pressure and the solid material was recrystallized from n-hexane to give the produce in 80% yield.
Carbon-bound H-atoms were placed in calculated positions [C—H 0.95 to 0.98 Å, Uiso(H) 1.2 to 1.5Ueq(C)] and were included in the
in the riding model approximation.Data collection: CrysAlis PRO (Agilent, 2010); cell
CrysAlis PRO (Agilent, 2010); data reduction: CrysAlis PRO (Agilent, 2010); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).Fig. 1. Thermal ellipsoid plot (Barbour, 2001) of at C12H15NO5 the 70% probability level; hydrogen atoms are drawn as spheres of arbitrary radius. |
C12H15NO5 | F(000) = 1072 |
Mr = 253.25 | Dx = 1.322 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 1942 reflections |
a = 19.2761 (7) Å | θ = 2.3–28.5° |
b = 12.1131 (4) Å | µ = 0.10 mm−1 |
c = 11.7267 (5) Å | T = 100 K |
β = 111.682 (4)° | Plate, colorless |
V = 2544.38 (17) Å3 | 0.30 × 0.20 × 0.05 mm |
Z = 8 |
Agilent SuperNova Dual diffractometer with an Atlas detector | 2824 independent reflections |
Radiation source: SuperNova (Mo) X-ray Source | 2075 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.029 |
Detector resolution: 10.4041 pixels mm-1 | θmax = 27.5°, θmin = 2.3° |
ω scans | h = −17→24 |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) | k = −13→15 |
Tmin = 0.664, Tmax = 1.000 | l = −14→14 |
5580 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.047 | H-atom parameters constrained |
wR(F2) = 0.120 | w = 1/[σ2(Fo2) + (0.0444P)2 + 0.6948P] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max = 0.001 |
2824 reflections | Δρmax = 0.27 e Å−3 |
164 parameters | Δρmin = −0.21 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0033 (4) |
C12H15NO5 | V = 2544.38 (17) Å3 |
Mr = 253.25 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 19.2761 (7) Å | µ = 0.10 mm−1 |
b = 12.1131 (4) Å | T = 100 K |
c = 11.7267 (5) Å | 0.30 × 0.20 × 0.05 mm |
β = 111.682 (4)° |
Agilent SuperNova Dual diffractometer with an Atlas detector | 2824 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010) | 2075 reflections with I > 2σ(I) |
Tmin = 0.664, Tmax = 1.000 | Rint = 0.029 |
5580 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.120 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.27 e Å−3 |
2824 reflections | Δρmin = −0.21 e Å−3 |
164 parameters |
x | y | z | Uiso*/Ueq | ||
O1 | 0.37259 (7) | 0.48179 (13) | 0.04938 (14) | 0.0505 (4) | |
O2 | 0.41306 (9) | 0.58588 (13) | 0.21067 (16) | 0.0581 (5) | |
O3 | 0.44798 (6) | 0.11669 (9) | 0.44903 (11) | 0.0251 (3) | |
O4 | 0.59965 (6) | 0.13203 (9) | 0.53127 (11) | 0.0279 (3) | |
O5 | 0.60685 (5) | 0.11686 (9) | 0.72849 (10) | 0.0233 (3) | |
N1 | 0.39810 (8) | 0.49483 (14) | 0.16138 (17) | 0.0387 (4) | |
C1 | 0.41151 (9) | 0.39685 (14) | 0.23939 (17) | 0.0275 (4) | |
C2 | 0.43579 (9) | 0.41028 (15) | 0.36502 (17) | 0.0287 (4) | |
H2 | 0.4428 | 0.4821 | 0.4001 | 0.034* | |
C3 | 0.44980 (8) | 0.31747 (14) | 0.43918 (16) | 0.0258 (4) | |
H3 | 0.4666 | 0.3249 | 0.5258 | 0.031* | |
C4 | 0.43901 (8) | 0.21342 (13) | 0.38562 (15) | 0.0221 (4) | |
C5 | 0.41454 (8) | 0.20196 (14) | 0.25872 (15) | 0.0240 (4) | |
H5 | 0.4076 | 0.1304 | 0.2231 | 0.029* | |
C6 | 0.40040 (8) | 0.29378 (15) | 0.18461 (16) | 0.0275 (4) | |
H6 | 0.3834 | 0.2866 | 0.0979 | 0.033* | |
C7 | 0.48824 (8) | 0.11660 (14) | 0.57817 (15) | 0.0250 (4) | |
H7A | 0.4768 | 0.0482 | 0.6141 | 0.030* | |
H7B | 0.4723 | 0.1803 | 0.6155 | 0.030* | |
C8 | 0.57178 (8) | 0.12344 (13) | 0.60739 (16) | 0.0223 (4) | |
C9 | 0.69011 (8) | 0.12075 (13) | 0.78688 (16) | 0.0241 (4) | |
C10 | 0.72379 (9) | 0.02283 (15) | 0.74544 (17) | 0.0312 (4) | |
H10A | 0.7142 | 0.0297 | 0.6576 | 0.047* | |
H10B | 0.7012 | −0.0455 | 0.7602 | 0.047* | |
H10C | 0.7778 | 0.0210 | 0.7917 | 0.047* | |
C11 | 0.70230 (9) | 0.11251 (16) | 0.92190 (16) | 0.0352 (5) | |
H11A | 0.6833 | 0.0415 | 0.9379 | 0.053* | |
H11B | 0.6757 | 0.1727 | 0.9440 | 0.053* | |
H11C | 0.7558 | 0.1180 | 0.9711 | 0.053* | |
C12 | 0.71824 (9) | 0.23046 (15) | 0.75805 (18) | 0.0341 (5) | |
H12A | 0.7088 | 0.2344 | 0.6701 | 0.051* | |
H12B | 0.7720 | 0.2367 | 0.8049 | 0.051* | |
H12C | 0.6921 | 0.2910 | 0.7806 | 0.051* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0487 (8) | 0.0646 (11) | 0.0413 (10) | 0.0150 (7) | 0.0201 (7) | 0.0271 (8) |
O2 | 0.0813 (11) | 0.0317 (9) | 0.0778 (13) | 0.0110 (7) | 0.0485 (10) | 0.0148 (9) |
O3 | 0.0243 (6) | 0.0262 (7) | 0.0213 (6) | −0.0002 (4) | 0.0044 (5) | 0.0025 (5) |
O4 | 0.0270 (6) | 0.0348 (7) | 0.0239 (7) | −0.0001 (5) | 0.0118 (5) | 0.0043 (6) |
O5 | 0.0185 (6) | 0.0303 (7) | 0.0201 (6) | −0.0014 (4) | 0.0059 (5) | 0.0008 (5) |
N1 | 0.0367 (9) | 0.0391 (10) | 0.0513 (12) | 0.0145 (7) | 0.0290 (8) | 0.0197 (9) |
C1 | 0.0242 (8) | 0.0314 (10) | 0.0315 (10) | 0.0087 (7) | 0.0159 (7) | 0.0098 (8) |
C2 | 0.0289 (9) | 0.0263 (9) | 0.0348 (11) | 0.0030 (7) | 0.0162 (8) | −0.0010 (8) |
C3 | 0.0269 (8) | 0.0295 (10) | 0.0220 (9) | 0.0017 (7) | 0.0100 (7) | −0.0013 (8) |
C4 | 0.0165 (7) | 0.0269 (9) | 0.0233 (9) | 0.0020 (6) | 0.0078 (6) | 0.0037 (7) |
C5 | 0.0196 (8) | 0.0305 (9) | 0.0221 (9) | 0.0020 (6) | 0.0079 (6) | −0.0023 (7) |
C6 | 0.0189 (8) | 0.0424 (11) | 0.0226 (9) | 0.0052 (7) | 0.0093 (7) | 0.0036 (8) |
C7 | 0.0224 (8) | 0.0321 (10) | 0.0188 (9) | −0.0002 (6) | 0.0057 (7) | 0.0043 (8) |
C8 | 0.0237 (8) | 0.0203 (8) | 0.0223 (9) | −0.0002 (6) | 0.0078 (7) | 0.0019 (7) |
C9 | 0.0171 (8) | 0.0275 (9) | 0.0247 (9) | −0.0023 (6) | 0.0043 (7) | −0.0019 (7) |
C10 | 0.0232 (8) | 0.0327 (10) | 0.0357 (11) | 0.0011 (7) | 0.0086 (7) | −0.0032 (9) |
C11 | 0.0242 (9) | 0.0523 (13) | 0.0250 (10) | −0.0014 (8) | 0.0044 (7) | −0.0021 (9) |
C12 | 0.0261 (9) | 0.0323 (10) | 0.0422 (12) | −0.0054 (7) | 0.0105 (8) | −0.0013 (9) |
O1—N1 | 1.231 (2) | C6—H6 | 0.9500 |
O2—N1 | 1.229 (2) | C7—C8 | 1.520 (2) |
O3—C4 | 1.3641 (19) | C7—H7A | 0.9900 |
O3—C7 | 1.424 (2) | C7—H7B | 0.9900 |
O4—C8 | 1.2044 (19) | C9—C10 | 1.516 (2) |
O5—C8 | 1.3307 (19) | C9—C11 | 1.516 (2) |
O5—C9 | 1.4949 (18) | C9—C12 | 1.520 (2) |
N1—C1 | 1.462 (2) | C10—H10A | 0.9800 |
C1—C2 | 1.381 (3) | C10—H10B | 0.9800 |
C1—C6 | 1.384 (2) | C10—H10C | 0.9800 |
C2—C3 | 1.386 (2) | C11—H11A | 0.9800 |
C2—H2 | 0.9500 | C11—H11B | 0.9800 |
C3—C4 | 1.389 (2) | C11—H11C | 0.9800 |
C3—H3 | 0.9500 | C12—H12A | 0.9800 |
C4—C5 | 1.392 (2) | C12—H12B | 0.9800 |
C5—C6 | 1.375 (2) | C12—H12C | 0.9800 |
C5—H5 | 0.9500 | ||
C4—O3—C7 | 119.34 (12) | H7A—C7—H7B | 108.1 |
C8—O5—C9 | 121.54 (12) | O4—C8—O5 | 127.32 (14) |
O2—N1—O1 | 123.29 (17) | O4—C8—C7 | 124.28 (15) |
O2—N1—C1 | 118.53 (18) | O5—C8—C7 | 108.39 (14) |
O1—N1—C1 | 118.17 (18) | O5—C9—C10 | 110.06 (12) |
C2—C1—C6 | 122.33 (16) | O5—C9—C11 | 101.67 (12) |
C2—C1—N1 | 118.94 (17) | C10—C9—C11 | 111.34 (15) |
C6—C1—N1 | 118.72 (17) | O5—C9—C12 | 109.67 (13) |
C1—C2—C3 | 119.00 (17) | C10—C9—C12 | 112.49 (14) |
C1—C2—H2 | 120.5 | C11—C9—C12 | 111.08 (15) |
C3—C2—H2 | 120.5 | C9—C10—H10A | 109.5 |
C2—C3—C4 | 119.37 (16) | C9—C10—H10B | 109.5 |
C2—C3—H3 | 120.3 | H10A—C10—H10B | 109.5 |
C4—C3—H3 | 120.3 | C9—C10—H10C | 109.5 |
O3—C4—C3 | 124.42 (15) | H10A—C10—H10C | 109.5 |
O3—C4—C5 | 114.94 (14) | H10B—C10—H10C | 109.5 |
C3—C4—C5 | 120.59 (15) | C9—C11—H11A | 109.5 |
C6—C5—C4 | 120.30 (16) | C9—C11—H11B | 109.5 |
C6—C5—H5 | 119.8 | H11A—C11—H11B | 109.5 |
C4—C5—H5 | 119.8 | C9—C11—H11C | 109.5 |
C5—C6—C1 | 118.40 (16) | H11A—C11—H11C | 109.5 |
C5—C6—H6 | 120.8 | H11B—C11—H11C | 109.5 |
C1—C6—H6 | 120.8 | C9—C12—H12A | 109.5 |
O3—C7—C8 | 110.82 (14) | C9—C12—H12B | 109.5 |
O3—C7—H7A | 109.5 | H12A—C12—H12B | 109.5 |
C8—C7—H7A | 109.5 | C9—C12—H12C | 109.5 |
O3—C7—H7B | 109.5 | H12A—C12—H12C | 109.5 |
C8—C7—H7B | 109.5 | H12B—C12—H12C | 109.5 |
O2—N1—C1—C2 | 4.2 (2) | C3—C4—C5—C6 | −0.3 (2) |
O1—N1—C1—C2 | −176.09 (15) | C4—C5—C6—C1 | 0.4 (2) |
O2—N1—C1—C6 | −174.92 (15) | C2—C1—C6—C5 | −0.3 (2) |
O1—N1—C1—C6 | 4.8 (2) | N1—C1—C6—C5 | 178.73 (13) |
C6—C1—C2—C3 | 0.2 (2) | C4—O3—C7—C8 | −76.68 (17) |
N1—C1—C2—C3 | −178.85 (13) | C9—O5—C8—O4 | 0.6 (2) |
C1—C2—C3—C4 | −0.1 (2) | C9—O5—C8—C7 | 179.79 (12) |
C7—O3—C4—C3 | −16.7 (2) | O3—C7—C8—O4 | 2.6 (2) |
C7—O3—C4—C5 | 165.91 (13) | O3—C7—C8—O5 | −176.57 (12) |
C2—C3—C4—O3 | −177.12 (14) | C8—O5—C9—C10 | −62.81 (18) |
C2—C3—C4—C5 | 0.1 (2) | C8—O5—C9—C11 | 179.09 (14) |
O3—C4—C5—C6 | 177.24 (12) | C8—O5—C9—C12 | 61.45 (18) |
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6···O4i | 0.95 | 2.50 | 3.201 (2) | 130 |
C12—H12C···O2ii | 0.98 | 2.55 | 3.489 (3) | 161 |
Symmetry codes: (i) −x+1, y, −z+1/2; (ii) −x+1, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C12H15NO5 |
Mr | 253.25 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 100 |
a, b, c (Å) | 19.2761 (7), 12.1131 (4), 11.7267 (5) |
β (°) | 111.682 (4) |
V (Å3) | 2544.38 (17) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.30 × 0.20 × 0.05 |
Data collection | |
Diffractometer | Agilent SuperNova Dual diffractometer with an Atlas detector |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2010) |
Tmin, Tmax | 0.664, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5580, 2824, 2075 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.120, 1.06 |
No. of reflections | 2824 |
No. of parameters | 164 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.27, −0.21 |
Computer programs: CrysAlis PRO (Agilent, 2010), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6···O4i | 0.95 | 2.50 | 3.201 (2) | 130 |
C12—H12C···O2ii | 0.98 | 2.55 | 3.489 (3) | 161 |
Symmetry codes: (i) −x+1, y, −z+1/2; (ii) −x+1, −y+1, −z+1. |
Acknowledgements
We thank the Higher Education Commission of Pakistan and the University of Malaya for supporting this study.
References
Agilent (2010). CrysAlis PRO. Agilent Technologies, Yarnton, Oxfordshire, England. Google Scholar
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The C12H15NO5 compound (Scheme I) was synthesized for evaluation of its potency against urease enzymes (Arfan et al., 2010); we have also synthesized other t-butyl esters of phenols (Ali et al., 2010; Mustafa et al., 2010). The nitrophenoxy portion is approximately planar (r.m.s. deviation 0.034 Å) this makes an angle of 84.8 (1)° with respect to the –CH2–C(═O)–O–C fragment (Fig. 1). π-π stacking is observed between nearly parallel C1-benzene and C1i-benzene rings of adjacent molecules (symmetry code: (i) 1-x, y, 1/2-z), centroids distance being 3.6806 (10) Å. Intermolecular weak C—H···O hydrogen bonding is present in the crystal structure (Table 1).