organic compounds
(±)-4,12,15,18,26-Pentahydroxy-13,17-dioxaheptacyclo[14.10.0.03,14.04,12.06,11.018,26.019,24]hexacosa-1,3(14),6(11),7,9,15,19,21,23-nonaene-5,25-dione monohydrate
aDepartment of Chemistry, Bahauddin Zakariya University, Multan 60800, Pakistan, and bDepartment of Physics, University of Sargodha, Sargodha, Pakistan
*Correspondence e-mail: dmntahir_uos@yahoo.com
The title compound, C24H14O9·H2O, displays a cup-shaped form. The water molecule is disordered over two set of sites with an occupancy ratio of 0.78:0.22. The molecule of the compound has four stereocenters and corresponds to the SSRR/RRSS diastereoisomer. In the molecule, the maximum dihedral angle between the planar benzene rings is 80.40 (4)°. The H atoms of the hydroxy groups are engaged in hydrogen bonding, forming infinite chains parallel to the a axis. These chains are interlinked through water molecules, resulting in the formation of a two-dimensional network parallel to the (001) plane. Futhermore C—H⋯O, C—H⋯π and slipped π–π interactions result in the formation of a three-dimensional network.
Related literature
For background and related structures, see: Almog et al. (2009); Yaqub et al. (2010).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996), ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON.
Supporting information
10.1107/S1600536811009573/dn2665sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811009573/dn2665Isup2.hkl
The pyrogallol (0.10 g, 0.793 mmol) was added to the stirred solution of ninhydrin (0.29 g, 1.586 mmol) in 15 ml of acetic acid at 323 K for 45 min and kept at room temperature for five days in a closed vessel. White colorless prisms for x-ray analysis of the title compound (I) were separated and washed with acetic acid and Petrolium ether.
Yield: 0.29 g, 74% m.p. 548 K
The high values of thermal parameters of the solvent water lead to the disorder. The water molecule is disordered over two set of sites with occupancy ratio of groups is 0.786 (5):0.214 (5). The disordered water molecules were treated with equal thermal parameters. One of the H-atom shares both disordered molecules.
All H atoms attached to C atoms and O atom of hydroxy groups were fixed geometrically and treated as riding with C—H = 0.93 and O—H = 0.82 Å with Uiso(H) = 1.2Ueq(C) or Uiso(H) = 1.5Ueq(O). H atoms of the disordered water molecule were located in difference Fourier maps and included in the subsequent
using restraints (O-H = 0.85 (1)Å and H···H = 1.40 (2)Å) with Uiso(H) = 1.5Ueq(O). In the last cycles of they were treated as riding on their parent O atom.Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996), ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2009).Fig. 1. View of the title compound with the atom numbering scheme. The thermal ellipsoids are drawn at the 30% probability level. H-atoms are shown by small circles of arbitrary radii. For the sake of clarity, only the major component of the disordered water molecule is represented. | |
Fig. 2. Partial packing view showing the formation of chain parallel to the a axis. For clarity H atoms not involved in hydrogen bondings and disordered water molecule have been omitted. H bonds are represented as dashed line. |
C24H14O9·H2O | Z = 2 |
Mr = 464.37 | F(000) = 480 |
Triclinic, P1 | Dx = 1.553 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.2448 (4) Å | Cell parameters from 2717 reflections |
b = 11.1558 (7) Å | θ = 2.1–25.3° |
c = 12.2569 (7) Å | µ = 0.12 mm−1 |
α = 64.571 (2)° | T = 296 K |
β = 78.126 (1)° | Prisms, white |
γ = 80.738 (2)° | 0.24 × 0.16 × 0.14 mm |
V = 992.98 (10) Å3 |
Bruker Kappa APEXII CCD diffractometer | 3592 independent reflections |
Radiation source: fine-focus sealed tube | 2717 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.039 |
Detector resolution: 8.10 pixels mm-1 | θmax = 25.3°, θmin = 2.1° |
ω scans | h = −9→9 |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −13→13 |
Tmin = 0.975, Tmax = 0.983 | l = −14→14 |
14323 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.106 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0477P)2 + 0.3139P] where P = (Fo2 + 2Fc2)/3 |
3592 reflections | (Δ/σ)max < 0.001 |
312 parameters | Δρmax = 0.29 e Å−3 |
0 restraints | Δρmin = −0.22 e Å−3 |
C24H14O9·H2O | γ = 80.738 (2)° |
Mr = 464.37 | V = 992.98 (10) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.2448 (4) Å | Mo Kα radiation |
b = 11.1558 (7) Å | µ = 0.12 mm−1 |
c = 12.2569 (7) Å | T = 296 K |
α = 64.571 (2)° | 0.24 × 0.16 × 0.14 mm |
β = 78.126 (1)° |
Bruker Kappa APEXII CCD diffractometer | 3592 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 2717 reflections with I > 2σ(I) |
Tmin = 0.975, Tmax = 0.983 | Rint = 0.039 |
14323 measured reflections |
R[F2 > 2σ(F2)] = 0.041 | 0 restraints |
wR(F2) = 0.106 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.29 e Å−3 |
3592 reflections | Δρmin = −0.22 e Å−3 |
312 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
O1 | 0.74158 (16) | 0.31117 (14) | 0.13753 (13) | 0.0325 (4) | |
H1 | 0.8190 | 0.3518 | 0.1328 | 0.049* | |
O2 | 0.44555 (15) | 0.20020 (13) | 0.18069 (12) | 0.0275 (3) | |
O3 | 0.23840 (18) | 0.07962 (14) | 0.18599 (13) | 0.0345 (4) | |
H3 | 0.2547 | 0.1146 | 0.1110 | 0.052* | |
O4 | 0.06749 (16) | 0.34145 (16) | 0.10489 (12) | 0.0340 (4) | |
H4 | 0.1297 | 0.3594 | 0.0395 | 0.051* | |
O5 | −0.08231 (19) | 0.34995 (16) | 0.32765 (14) | 0.0470 (4) | |
O6 | 0.70474 (15) | 0.58630 (14) | 0.12331 (12) | 0.0278 (3) | |
O7 | 0.38306 (18) | 0.82777 (14) | 0.04490 (13) | 0.0367 (4) | |
H7 | 0.4280 | 0.8243 | −0.0200 | 0.055* | |
O8 | 0.71372 (18) | 0.81081 (15) | 0.06590 (12) | 0.0348 (4) | |
H8 | 0.7947 | 0.8166 | 0.0920 | 0.052* | |
O9 | 0.20667 (19) | 0.75200 (17) | 0.28466 (15) | 0.0472 (4) | |
O10A | 0.9905 (3) | 0.8676 (3) | 0.1058 (3) | 0.1166 (15) | 0.78 |
H10A | 1.0445 | 0.8386 | 0.1654 | 0.175* | 0.78 |
H10B | 1.0535 | 0.9036 | 0.0381 | 0.175* | |
O10B | 1.0286 (3) | 0.8307 (3) | 0.0423 (3) | 0.1166 (15) | 0.22 |
H10C | 1.0828 | 0.8252 | −0.0326 | 0.175* | 0.22 |
C1 | 0.2922 (2) | 0.3946 (2) | 0.17679 (16) | 0.0237 (4) | |
C2 | 0.4482 (2) | 0.32831 (19) | 0.16793 (16) | 0.0229 (4) | |
C3 | 0.5959 (2) | 0.38453 (19) | 0.14809 (16) | 0.0229 (4) | |
C4 | 0.5743 (2) | 0.5138 (2) | 0.13981 (16) | 0.0236 (4) | |
C5 | 0.4192 (2) | 0.58264 (19) | 0.14865 (16) | 0.0239 (4) | |
C6 | 0.2742 (2) | 0.5243 (2) | 0.16695 (17) | 0.0254 (4) | |
H6 | 0.1701 | 0.5699 | 0.1724 | 0.031* | |
C7 | 0.2716 (2) | 0.1651 (2) | 0.23039 (17) | 0.0267 (5) | |
C8 | 0.1629 (2) | 0.3014 (2) | 0.20018 (17) | 0.0257 (4) | |
C9 | 0.0451 (2) | 0.2811 (2) | 0.32021 (18) | 0.0292 (5) | |
C10 | 0.1173 (2) | 0.1670 (2) | 0.41783 (18) | 0.0284 (5) | |
C11 | 0.0688 (3) | 0.1197 (2) | 0.54396 (19) | 0.0365 (5) | |
H11 | −0.0191 | 0.1630 | 0.5777 | 0.044* | |
C12 | 0.1552 (3) | 0.0069 (2) | 0.6172 (2) | 0.0424 (6) | |
H12 | 0.1258 | −0.0260 | 0.7017 | 0.051* | |
C13 | 0.2853 (3) | −0.0581 (2) | 0.5666 (2) | 0.0415 (6) | |
H13 | 0.3413 | −0.1343 | 0.6179 | 0.050* | |
C14 | 0.3335 (3) | −0.0120 (2) | 0.44149 (19) | 0.0350 (5) | |
H14 | 0.4213 | −0.0556 | 0.4080 | 0.042* | |
C15 | 0.2470 (2) | 0.1011 (2) | 0.36760 (18) | 0.0268 (5) | |
C16 | 0.6316 (2) | 0.7026 (2) | 0.15031 (17) | 0.0277 (5) | |
C17 | 0.4423 (2) | 0.7165 (2) | 0.14245 (17) | 0.0276 (5) | |
C18 | 0.3551 (3) | 0.7255 (2) | 0.26280 (19) | 0.0311 (5) | |
C19 | 0.4801 (3) | 0.6899 (2) | 0.34347 (18) | 0.0303 (5) | |
C20 | 0.6377 (2) | 0.6727 (2) | 0.28187 (18) | 0.0284 (5) | |
C21 | 0.7748 (3) | 0.6349 (2) | 0.34150 (19) | 0.0359 (5) | |
H21 | 0.8802 | 0.6208 | 0.3018 | 0.043* | |
C22 | 0.7509 (3) | 0.6189 (2) | 0.4618 (2) | 0.0426 (6) | |
H22 | 0.8420 | 0.5950 | 0.5029 | 0.051* | |
C23 | 0.5942 (3) | 0.6377 (2) | 0.5225 (2) | 0.0426 (6) | |
H23 | 0.5821 | 0.6272 | 0.6031 | 0.051* | |
C24 | 0.4564 (3) | 0.6717 (2) | 0.46534 (19) | 0.0373 (5) | |
H24 | 0.3508 | 0.6822 | 0.5066 | 0.045* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0166 (7) | 0.0386 (9) | 0.0433 (9) | −0.0027 (6) | −0.0024 (6) | −0.0186 (7) |
O2 | 0.0203 (7) | 0.0296 (8) | 0.0319 (8) | −0.0061 (6) | 0.0026 (6) | −0.0135 (6) |
O3 | 0.0396 (9) | 0.0396 (9) | 0.0299 (8) | −0.0151 (7) | 0.0011 (7) | −0.0181 (7) |
O4 | 0.0214 (8) | 0.0528 (10) | 0.0270 (8) | −0.0106 (7) | −0.0038 (6) | −0.0130 (7) |
O5 | 0.0327 (9) | 0.0492 (10) | 0.0442 (10) | 0.0055 (8) | 0.0066 (7) | −0.0139 (8) |
O6 | 0.0220 (7) | 0.0351 (8) | 0.0299 (7) | −0.0086 (6) | 0.0005 (6) | −0.0165 (6) |
O7 | 0.0418 (9) | 0.0335 (9) | 0.0308 (8) | −0.0006 (7) | −0.0062 (7) | −0.0100 (7) |
O8 | 0.0383 (9) | 0.0398 (9) | 0.0264 (8) | −0.0185 (7) | −0.0032 (6) | −0.0093 (7) |
O9 | 0.0341 (10) | 0.0651 (12) | 0.0484 (10) | 0.0044 (8) | −0.0016 (7) | −0.0338 (9) |
O10A | 0.102 (2) | 0.136 (3) | 0.081 (2) | −0.074 (2) | −0.0554 (19) | 0.0243 (19) |
O10B | 0.102 (2) | 0.136 (3) | 0.081 (2) | −0.074 (2) | −0.0554 (19) | 0.0243 (19) |
C1 | 0.0183 (10) | 0.0325 (11) | 0.0206 (10) | −0.0043 (8) | −0.0019 (7) | −0.0109 (9) |
C2 | 0.0233 (11) | 0.0270 (11) | 0.0178 (9) | −0.0056 (8) | −0.0005 (7) | −0.0086 (8) |
C3 | 0.0178 (10) | 0.0309 (11) | 0.0190 (9) | −0.0020 (8) | −0.0016 (7) | −0.0096 (8) |
C4 | 0.0214 (11) | 0.0318 (11) | 0.0186 (9) | −0.0094 (8) | −0.0002 (7) | −0.0101 (8) |
C5 | 0.0243 (11) | 0.0285 (11) | 0.0183 (9) | −0.0033 (8) | −0.0021 (7) | −0.0093 (8) |
C6 | 0.0181 (10) | 0.0332 (12) | 0.0242 (10) | −0.0003 (8) | −0.0025 (8) | −0.0119 (9) |
C7 | 0.0204 (11) | 0.0331 (12) | 0.0281 (11) | −0.0104 (8) | 0.0020 (8) | −0.0137 (9) |
C8 | 0.0171 (10) | 0.0362 (12) | 0.0243 (10) | −0.0056 (8) | −0.0024 (8) | −0.0119 (9) |
C9 | 0.0224 (11) | 0.0352 (12) | 0.0318 (11) | −0.0085 (9) | 0.0017 (8) | −0.0157 (10) |
C10 | 0.0247 (11) | 0.0343 (12) | 0.0281 (11) | −0.0103 (9) | 0.0002 (8) | −0.0138 (9) |
C11 | 0.0360 (13) | 0.0461 (14) | 0.0293 (12) | −0.0126 (10) | 0.0046 (9) | −0.0183 (11) |
C12 | 0.0475 (15) | 0.0511 (15) | 0.0250 (11) | −0.0179 (12) | −0.0023 (10) | −0.0089 (11) |
C13 | 0.0397 (14) | 0.0397 (14) | 0.0356 (13) | −0.0072 (11) | −0.0113 (10) | −0.0026 (11) |
C14 | 0.0300 (12) | 0.0332 (12) | 0.0378 (12) | −0.0044 (9) | −0.0036 (9) | −0.0109 (10) |
C15 | 0.0237 (11) | 0.0306 (11) | 0.0283 (11) | −0.0096 (9) | −0.0017 (8) | −0.0124 (9) |
C16 | 0.0290 (11) | 0.0300 (11) | 0.0250 (10) | −0.0093 (9) | 0.0001 (8) | −0.0116 (9) |
C17 | 0.0273 (11) | 0.0312 (11) | 0.0244 (10) | −0.0035 (9) | −0.0040 (8) | −0.0111 (9) |
C18 | 0.0323 (13) | 0.0288 (12) | 0.0329 (12) | −0.0048 (9) | 0.0014 (9) | −0.0153 (10) |
C19 | 0.0370 (13) | 0.0271 (11) | 0.0287 (11) | −0.0064 (9) | −0.0005 (9) | −0.0139 (9) |
C20 | 0.0343 (12) | 0.0262 (11) | 0.0265 (10) | −0.0077 (9) | −0.0028 (9) | −0.0116 (9) |
C21 | 0.0361 (13) | 0.0406 (13) | 0.0349 (12) | −0.0059 (10) | −0.0078 (10) | −0.0172 (10) |
C22 | 0.0551 (16) | 0.0412 (14) | 0.0367 (13) | −0.0050 (11) | −0.0176 (11) | −0.0159 (11) |
C23 | 0.0667 (17) | 0.0392 (14) | 0.0255 (11) | −0.0086 (12) | −0.0077 (11) | −0.0150 (10) |
C24 | 0.0502 (15) | 0.0344 (13) | 0.0287 (12) | −0.0090 (10) | 0.0028 (10) | −0.0161 (10) |
O1—C3 | 1.356 (2) | C7—C15 | 1.501 (3) |
O1—H1 | 0.8200 | C7—C8 | 1.571 (3) |
O2—C2 | 1.373 (2) | C8—C9 | 1.535 (3) |
O2—C7 | 1.482 (2) | C9—C10 | 1.465 (3) |
O3—C7 | 1.369 (2) | C10—C15 | 1.388 (3) |
O3—H3 | 0.8200 | C10—C11 | 1.393 (3) |
O4—C8 | 1.414 (2) | C11—C12 | 1.379 (3) |
O4—H4 | 0.8200 | C11—H11 | 0.9300 |
O5—C9 | 1.210 (2) | C12—C13 | 1.387 (3) |
O6—C4 | 1.379 (2) | C12—H12 | 0.9300 |
O6—C16 | 1.481 (2) | C13—C14 | 1.383 (3) |
O7—C17 | 1.407 (2) | C13—H13 | 0.9300 |
O7—H7 | 0.8200 | C14—C15 | 1.384 (3) |
O8—C16 | 1.374 (2) | C14—H14 | 0.9300 |
O8—H8 | 0.8200 | C16—C20 | 1.510 (3) |
O9—C18 | 1.214 (2) | C16—C17 | 1.562 (3) |
O10A—H10A | 0.8488 | C17—C18 | 1.540 (3) |
O10A—H10B | 0.8501 | C18—C19 | 1.466 (3) |
O10B—H10B | 0.8488 | C19—C20 | 1.391 (3) |
O10B—H10C | 0.9573 | C19—C24 | 1.394 (3) |
C1—C2 | 1.385 (3) | C20—C21 | 1.383 (3) |
C1—C6 | 1.385 (3) | C21—C22 | 1.382 (3) |
C1—C8 | 1.507 (3) | C21—H21 | 0.9300 |
C2—C3 | 1.389 (3) | C22—C23 | 1.385 (3) |
C3—C4 | 1.386 (3) | C22—H22 | 0.9300 |
C4—C5 | 1.391 (3) | C23—C24 | 1.373 (3) |
C5—C6 | 1.385 (3) | C23—H23 | 0.9300 |
C5—C17 | 1.503 (3) | C24—H24 | 0.9300 |
C6—H6 | 0.9300 | ||
C3—O1—H1 | 109.5 | C10—C11—H11 | 121.0 |
C2—O2—C7 | 106.21 (13) | C11—C12—C13 | 120.9 (2) |
C7—O3—H3 | 109.5 | C11—C12—H12 | 119.5 |
C8—O4—H4 | 109.5 | C13—C12—H12 | 119.5 |
C4—O6—C16 | 106.53 (14) | C14—C13—C12 | 121.4 (2) |
C17—O7—H7 | 109.5 | C14—C13—H13 | 119.3 |
C16—O8—H8 | 109.5 | C12—C13—H13 | 119.3 |
H10A—O10A—H10B | 111.1 | C13—C14—C15 | 117.9 (2) |
H10B—O10B—H10C | 105.5 | C13—C14—H14 | 121.0 |
C2—C1—C6 | 120.97 (17) | C15—C14—H14 | 121.0 |
C2—C1—C8 | 108.59 (17) | C14—C15—C10 | 120.92 (19) |
C6—C1—C8 | 130.42 (17) | C14—C15—C7 | 127.30 (18) |
O2—C2—C1 | 114.10 (16) | C10—C15—C7 | 111.75 (18) |
O2—C2—C3 | 122.06 (17) | O8—C16—O6 | 107.42 (15) |
C1—C2—C3 | 123.84 (18) | O8—C16—C20 | 114.67 (16) |
O1—C3—C4 | 127.48 (17) | O6—C16—C20 | 110.07 (16) |
O1—C3—C2 | 118.53 (17) | O8—C16—C17 | 113.52 (16) |
C4—C3—C2 | 113.99 (17) | O6—C16—C17 | 106.15 (14) |
O6—C4—C3 | 123.20 (17) | C20—C16—C17 | 104.69 (15) |
O6—C4—C5 | 113.39 (17) | O7—C17—C5 | 115.96 (16) |
C3—C4—C5 | 123.41 (17) | O7—C17—C18 | 108.19 (16) |
C6—C5—C4 | 121.19 (19) | C5—C17—C18 | 108.73 (15) |
C6—C5—C17 | 129.73 (18) | O7—C17—C16 | 117.31 (16) |
C4—C5—C17 | 108.98 (16) | C5—C17—C16 | 101.66 (15) |
C5—C6—C1 | 116.59 (18) | C18—C17—C16 | 104.13 (15) |
C5—C6—H6 | 121.7 | O9—C18—C19 | 128.14 (19) |
C1—C6—H6 | 121.7 | O9—C18—C17 | 123.76 (19) |
O3—C7—O2 | 108.40 (14) | C19—C18—C17 | 108.01 (17) |
O3—C7—C15 | 110.20 (16) | C20—C19—C24 | 121.3 (2) |
O2—C7—C15 | 110.56 (15) | C20—C19—C18 | 110.23 (18) |
O3—C7—C8 | 118.18 (16) | C24—C19—C18 | 128.50 (19) |
O2—C7—C8 | 105.64 (14) | C21—C20—C19 | 120.31 (19) |
C15—C7—C8 | 103.66 (15) | C21—C20—C16 | 128.44 (18) |
O4—C8—C1 | 114.40 (16) | C19—C20—C16 | 111.24 (18) |
O4—C8—C9 | 108.96 (15) | C22—C21—C20 | 118.1 (2) |
C1—C8—C9 | 111.02 (15) | C22—C21—H21 | 120.9 |
O4—C8—C7 | 116.81 (16) | C20—C21—H21 | 120.9 |
C1—C8—C7 | 101.22 (14) | C21—C22—C23 | 121.4 (2) |
C9—C8—C7 | 103.80 (15) | C21—C22—H22 | 119.3 |
O5—C9—C10 | 128.69 (18) | C23—C22—H22 | 119.3 |
O5—C9—C8 | 124.02 (19) | C24—C23—C22 | 121.0 (2) |
C10—C9—C8 | 107.30 (17) | C24—C23—H23 | 119.5 |
C15—C10—C11 | 120.9 (2) | C22—C23—H23 | 119.5 |
C15—C10—C9 | 109.91 (17) | C23—C24—C19 | 117.8 (2) |
C11—C10—C9 | 129.16 (19) | C23—C24—H24 | 121.1 |
C12—C11—C10 | 118.0 (2) | C19—C24—H24 | 121.1 |
C12—C11—H11 | 121.0 | ||
C7—O2—C2—C1 | −13.7 (2) | C13—C14—C15—C10 | 0.8 (3) |
C7—O2—C2—C3 | 166.22 (16) | C13—C14—C15—C7 | −176.90 (19) |
C6—C1—C2—O2 | 179.41 (16) | C11—C10—C15—C14 | −1.0 (3) |
C8—C1—C2—O2 | 0.8 (2) | C9—C10—C15—C14 | −178.79 (17) |
C6—C1—C2—C3 | −0.5 (3) | C11—C10—C15—C7 | 176.95 (17) |
C8—C1—C2—C3 | −179.17 (17) | C9—C10—C15—C7 | −0.8 (2) |
O2—C2—C3—O1 | 2.0 (3) | O3—C7—C15—C14 | 62.6 (2) |
C1—C2—C3—O1 | −178.11 (16) | O2—C7—C15—C14 | −57.2 (3) |
O2—C2—C3—C4 | −178.83 (16) | C8—C7—C15—C14 | −170.02 (19) |
C1—C2—C3—C4 | 1.1 (3) | O3—C7—C15—C10 | −115.25 (18) |
C16—O6—C4—C3 | −166.01 (17) | O2—C7—C15—C10 | 124.93 (17) |
C16—O6—C4—C5 | 13.3 (2) | C8—C7—C15—C10 | 12.1 (2) |
O1—C3—C4—O6 | −2.5 (3) | C4—O6—C16—O8 | −140.03 (15) |
C2—C3—C4—O6 | 178.36 (16) | C4—O6—C16—C20 | 94.49 (17) |
O1—C3—C4—C5 | 178.20 (17) | C4—O6—C16—C17 | −18.27 (18) |
C2—C3—C4—C5 | −0.9 (3) | C6—C5—C17—O7 | −64.0 (3) |
O6—C4—C5—C6 | −179.17 (16) | C4—C5—C17—O7 | 119.56 (18) |
C3—C4—C5—C6 | 0.2 (3) | C6—C5—C17—C18 | 58.1 (3) |
O6—C4—C5—C17 | −2.4 (2) | C4—C5—C17—C18 | −118.33 (17) |
C3—C4—C5—C17 | 176.96 (17) | C6—C5—C17—C16 | 167.58 (19) |
C4—C5—C6—C1 | 0.5 (3) | C4—C5—C17—C16 | −8.87 (19) |
C17—C5—C6—C1 | −175.59 (18) | O8—C16—C17—O7 | 6.5 (2) |
C2—C1—C6—C5 | −0.3 (3) | O6—C16—C17—O7 | −111.32 (18) |
C8—C1—C6—C5 | 178.02 (18) | C20—C16—C17—O7 | 132.24 (17) |
C2—O2—C7—O3 | 147.83 (15) | O8—C16—C17—C5 | 134.01 (16) |
C2—O2—C7—C15 | −91.28 (18) | O6—C16—C17—C5 | 16.24 (17) |
C2—O2—C7—C8 | 20.25 (17) | C20—C16—C17—C5 | −100.20 (16) |
C2—C1—C8—O4 | −114.96 (18) | O8—C16—C17—C18 | −113.04 (17) |
C6—C1—C8—O4 | 66.6 (3) | O6—C16—C17—C18 | 129.19 (15) |
C2—C1—C8—C9 | 121.23 (17) | C20—C16—C17—C18 | 12.75 (19) |
C6—C1—C8—C9 | −57.3 (3) | O7—C17—C18—O9 | 45.9 (3) |
C2—C1—C8—C7 | 11.54 (19) | C5—C17—C18—O9 | −80.8 (2) |
C6—C1—C8—C7 | −166.95 (19) | C16—C17—C18—O9 | 171.4 (2) |
O3—C7—C8—O4 | −15.6 (2) | O7—C17—C18—C19 | −137.08 (16) |
O2—C7—C8—O4 | 105.87 (17) | C5—C17—C18—C19 | 96.20 (18) |
C15—C7—C8—O4 | −137.81 (16) | C16—C17—C18—C19 | −11.6 (2) |
O3—C7—C8—C1 | −140.47 (16) | O9—C18—C19—C20 | −177.4 (2) |
O2—C7—C8—C1 | −19.02 (17) | C17—C18—C19—C20 | 5.8 (2) |
C15—C7—C8—C1 | 97.30 (16) | O9—C18—C19—C24 | 3.6 (4) |
O3—C7—C8—C9 | 104.36 (18) | C17—C18—C19—C24 | −173.2 (2) |
O2—C7—C8—C9 | −134.19 (14) | C24—C19—C20—C21 | 0.9 (3) |
C15—C7—C8—C9 | −17.87 (18) | C18—C19—C20—C21 | −178.18 (18) |
O4—C8—C9—O5 | −37.0 (3) | C24—C19—C20—C16 | −178.04 (18) |
C1—C8—C9—O5 | 89.9 (2) | C18—C19—C20—C16 | 2.9 (2) |
C7—C8—C9—O5 | −162.1 (2) | O8—C16—C20—C21 | −63.9 (3) |
O4—C8—C9—C10 | 143.22 (16) | O6—C16—C20—C21 | 57.4 (3) |
C1—C8—C9—C10 | −89.92 (19) | C17—C16—C20—C21 | 171.1 (2) |
C7—C8—C9—C10 | 18.09 (19) | O8—C16—C20—C19 | 114.97 (19) |
O5—C9—C10—C15 | 168.8 (2) | O6—C16—C20—C19 | −123.79 (17) |
C8—C9—C10—C15 | −11.4 (2) | C17—C16—C20—C19 | −10.1 (2) |
O5—C9—C10—C11 | −8.7 (4) | C19—C20—C21—C22 | −1.8 (3) |
C8—C9—C10—C11 | 171.1 (2) | C16—C20—C21—C22 | 176.9 (2) |
C15—C10—C11—C12 | 1.0 (3) | C20—C21—C22—C23 | 1.0 (3) |
C9—C10—C11—C12 | 178.2 (2) | C21—C22—C23—C24 | 0.7 (4) |
C10—C11—C12—C13 | −0.6 (3) | C22—C23—C24—C19 | −1.6 (3) |
C11—C12—C13—C14 | 0.4 (3) | C20—C19—C24—C23 | 0.8 (3) |
C12—C13—C14—C15 | −0.4 (3) | C18—C19—C24—C23 | 179.7 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O4i | 0.82 | 2.00 | 2.6885 (18) | 141 |
O3—H3···O8ii | 0.82 | 1.94 | 2.7559 (19) | 177 |
O4—H4···O6ii | 0.82 | 2.08 | 2.8964 (18) | 176 |
O7—H7···O2ii | 0.82 | 2.14 | 2.9548 (19) | 175 |
O8—H8···O10A | 0.82 | 1.86 | 2.653 (3) | 163 |
O8—H8···O10B | 0.82 | 1.91 | 2.587 (3) | 139 |
O10A—H10A···O9i | 0.85 | 2.01 | 2.844 (3) | 168 |
O10B—H10C···O1iii | 0.96 | 2.50 | 3.357 (5) | 148 |
C11—H11···O9iv | 0.93 | 2.44 | 3.345 (3) | 164 |
C23—H23···Cg1v | 0.93 | 2.65 | 3.562 (2) | 168 |
Symmetry codes: (i) x+1, y, z; (ii) −x+1, −y+1, −z; (iii) −x+2, −y+1, −z; (iv) −x, −y+1, −z+1; (v) −x+1, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C24H14O9·H2O |
Mr | 464.37 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 8.2448 (4), 11.1558 (7), 12.2569 (7) |
α, β, γ (°) | 64.571 (2), 78.126 (1), 80.738 (2) |
V (Å3) | 992.98 (10) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.24 × 0.16 × 0.14 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.975, 0.983 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14323, 3592, 2717 |
Rint | 0.039 |
(sin θ/λ)max (Å−1) | 0.600 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.041, 0.106, 1.03 |
No. of reflections | 3592 |
No. of parameters | 312 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.29, −0.22 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEPIII (Burnett & Johnson, 1996), ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2009), WinGX (Farrugia, 1999) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O4i | 0.82 | 2.00 | 2.6885 (18) | 141 |
O3—H3···O8ii | 0.82 | 1.94 | 2.7559 (19) | 177 |
O4—H4···O6ii | 0.82 | 2.08 | 2.8964 (18) | 176 |
O7—H7···O2ii | 0.82 | 2.14 | 2.9548 (19) | 175 |
O8—H8···O10A | 0.82 | 1.86 | 2.653 (3) | 163 |
O8—H8···O10B | 0.82 | 1.91 | 2.587 (3) | 139 |
O10A—H10A···O9i | 0.85 | 2.01 | 2.844 (3) | 168 |
O10B—H10C···O1iii | 0.96 | 2.50 | 3.357 (5) | 148 |
C11—H11···O9iv | 0.93 | 2.44 | 3.345 (3) | 164 |
C23—H23···Cg1v | 0.93 | 2.65 | 3.562 (2) | 168 |
Symmetry codes: (i) x+1, y, z; (ii) −x+1, −y+1, −z; (iii) −x+2, −y+1, −z; (iv) −x, −y+1, −z+1; (v) −x+1, −y+1, −z+1. |
Cg1, Cg2 and Cg3 are the centroids of the C1–C6, C10–C15 and C19–C24 rings, respectively. |
CgI | CgJ | CgI···CgJa | CgI···P(J)b | CgJ···P(I)c | Slippage |
Cg1 | Cg1vi | 3.5314 (11) | 3.396 | 3.396 | 0.968 |
Cg2 | Cg2vii | 3.6525 (14) | 3.377 | 3.377 | 1.392 |
Cg3 | Cg3v | 3.7905 (14) | 3.358 | 3.358 | 1.758 |
Symmetry codes: (v) 1-x, 1-y, 1-z; (vi) 1-x, 1-y, -z; (vii) -x, -y, 1-z Notes: (a) Distance between centroids; (b) perpendicular distance of CgI on ring plan J; (c) perpendicular distance of CgJ on ring plan I; (d) slippage = vertical displacement between ring centroids. |
Acknowledgements
The authors would like to thank the Higher Education Commission (HEC), Pakistan, for financial assistance to KM under the National Research Program for Universities.
References
Almog, J., Rozin, R., Klein, A., Shamuilov-Levinton, G. & Cohen, S. (2009). Tetrahedron, 65, 7954–7962. CrossRef CAS Google Scholar
Bruker (2005). SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruker (2009). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Burnett, M. N. & Johnson, C. K. (1996). ORTEPIII. Report ORNL-6895. Oak Ridge National Laboratory, Tennessee, USA. Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838. CrossRef CAS IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Yaqub, M., Mahmood, K., Tahir, M. N., Shafiq, Z. & Rauf, A. (2010). Acta Cryst. E66, o1886. Web of Science CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
We have recently reported the crystal structure of 6,7,8,9-tetrahydro-4 b,9 b-dihydroxyindano[1,2-b]indoline-9,10-dione monohydrate (Yaqub et al., 2010) synthesized from ninhydrine. In continuation to the synthesis of biologically important ninhydrine derivatives, we report herein the structure and preparation of the title compound (I).
The title compound (I) displays a cup shaped form (Fig. 1). In (I), the central group A (C1–C6/C8/C17/O1/O2/O6), the armed groups B (C7/C9/O5/C10—C15) and C (C16/C18/O9/C19–C24) are planar with r. m. s. deviations of 0.0250, 0.0462 and 0.0190 Å, respectively. The adjacent atoms C7 and C16 to central group A are at a distance of 0.3706 (22) and 0.3424 (22) Å, respectively from the mean square plane and thus forming envelop form from two sides. The group B also form envelop shape with C8 at a distance of 0.3203 (23) Å from its mean square plane. The C17 atom is at a distance of -0.1997 (24) Å from the mean square plane of group C. The dihedral angle between A/B, A/C and B/C is 80.40 (4)°, 78.55 (4)° and 38.59 (4)°, respectively. The molecule of (I) has stereo centers at C7, C8, C16 and C17 and corresponds to the SSRR/RRSS diastereoisomer. Intermolecular O—H···O hydrogen bonds involving the hydroxy groups build up infinite one dimensional chain parallel to the a axis (Table 1, Fig. 2) . Hydrogen bonds involving the water molecule link the chains to form a two dimensionnal network parallel to the (0 0 1) plane (Table 1) and weak C-H···O hydrogen bonds (Table 1) connect the sheet to build up a three dimensional network. The packing is further stabilized through C-H···π and slippest π—π interactions (Tables 1 and 2).
The crystal structure of (I) is closeled related to the structure of 4b,7a,12a,13,13b-pentahydroxy-4 b,7a,12a, 13b-tetrahydro-12H,14H-indeno[1,2-b]indeno[2',1':4,5]furo[3,2-f][1] benzofuran-12,14-dione methanol solvate (Almog et al., 2009). The differences with I are due to the bonding around phenol ring and inclusion of methanol solvate instead of water.