organic compounds
3α-Hydroxytirucalla-8,24-dien-21-oic acid
aH.E.J. Research Institute of Chemistry, International Center for Chemical and Biological Sciences, University of Karachi 75270, Pakistan, bDepartment of Chemistry, Higher Teachers Training College, University of Yaounde I, PO Box 48 Yaounde, Cameroon, cDepartment of Organic Chemistry, University of Yaounde I, PO Box 812 Yaounde, Cameroon, and dX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
The title compound, C30H48O3, a triterpene isolated from the resin of canarium schweinfurthiiand, is an isomer of the previously reported triterpene 3α-hydroxytirucalla-7,24-dien-21-oic acid [Mora et al. (2001). Acta Cryst. C57, 638–640], which crystallizes in the same trigonal The title molecule consists of four fused rings having chair, half-chair, half-chair and envelope conformations for rings A, B, C and D, respectively (steroid labelling). An intramolecular C—H⋯O hydrogen bond generates an S(7) ring. In the crystal, molecules are linked by O—H⋯O and C—H⋯O interactions, forming (001) sheets.
Related literature
For the α-hydroxytirucalla-7,24-diene-21-oic acid, see: Mora et al. (2001). For the biological activity of canarium schweinfurthiiand, see: Atawodi (2010); Dongmo et al. (2010) and for its botany, see: Tchiégang et al. (2001). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
of 3Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811008956/hb5815sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811008956/hb5815Isup2.hkl
The resin (100 g) of Canarium schweinfurthii Engl. was collected in Yaounde, Cameroon in May 2010 and identified by Prof. Noumi, a botanist at the Department of Biology, University of Yaounde-1. A voucher specimen (HNC 25918.) was deposited at the National Herbarium of Cameroon in Yaounde. The resin (100 g) of C. schweinfurthii was allowed to dry under shade and extracted with dichloromethane. The extract (70 g) was subjected to
(CC) over silica gel (300 g, 60 × 5 cm) eluting with hexane follow by a mixture of n-hexane-EtOAc in order of increasing polarities. The fractions eluted were monitored by thin layer and similar fraction were combined to give seven fraction FrA-FrG. Fraction FrE was further subjected to purification on silica gel CC and eluted with mixture of hexane-acetone in a gradient to yield the title compound. Recrystallization from n-hexane gave colorless blocks (75 mg).H atoms on the C of methyl, methylene, methine and oxygen were positioned geomatrically with C–H=0.98–1.00 Å and O–H= 0.96 Å, respectively and constrained to ride on their parent atoms with Uiso(H)= 1.2Ueq(CH2, CH) and 1.5Ueq(CH3, OH). A rotating group model was applied to the methyl groups. The
(C3 R, C5 R, C10 S, C13 S, C14 R, C17 S, C20 S) was obtained by refining the Flack (1983) parameter to -0.35 (19).Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C30H48O3 | Dx = 1.125 Mg m−3 |
Mr = 456.68 | Cu Kα radiation, λ = 1.54178 Å |
Trigonal, P3121 | Cell parameters from 16991 reflections |
a = 11.2794 (2) Å | θ = 3.6–71.8° |
c = 36.6986 (6) Å | µ = 0.54 mm−1 |
V = 4043.45 (12) Å3 | T = 100 K |
Z = 6 | Block, colorless |
F(000) = 1512 | 0.29 × 0.24 × 0.13 mm |
Bruker SMART APEXII DUO CCD diffractometer | 5154 independent reflections |
Radiation source: fine-focus sealed tube | 5062 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.040 |
ϕ and ω scans | θmax = 71.8°, θmin = 3.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −12→10 |
Tmin = 0.859, Tmax = 0.935 | k = −13→13 |
29022 measured reflections | l = −45→43 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.038 | H-atom parameters constrained |
wR(F2) = 0.104 | w = 1/[σ2(Fo2) + (0.0607P)2 + 1.1875P] where P = (Fo2 + 2Fc2)/3 |
S = 0.97 | (Δ/σ)max < 0.001 |
5154 reflections | Δρmax = 0.34 e Å−3 |
305 parameters | Δρmin = −0.15 e Å−3 |
0 restraints | Absolute structure: Flack (1983), 2099 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.35 (19) |
C30H48O3 | Z = 6 |
Mr = 456.68 | Cu Kα radiation |
Trigonal, P3121 | µ = 0.54 mm−1 |
a = 11.2794 (2) Å | T = 100 K |
c = 36.6986 (6) Å | 0.29 × 0.24 × 0.13 mm |
V = 4043.45 (12) Å3 |
Bruker SMART APEXII DUO CCD diffractometer | 5154 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 5062 reflections with I > 2σ(I) |
Tmin = 0.859, Tmax = 0.935 | Rint = 0.040 |
29022 measured reflections |
R[F2 > 2σ(F2)] = 0.038 | H-atom parameters constrained |
wR(F2) = 0.104 | Δρmax = 0.34 e Å−3 |
S = 0.97 | Δρmin = −0.15 e Å−3 |
5154 reflections | Absolute structure: Flack (1983), 2099 Friedel pairs |
305 parameters | Absolute structure parameter: −0.35 (19) |
0 restraints |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.12186 (11) | 0.02017 (12) | 0.12824 (3) | 0.0298 (2) | |
H1O1 | 0.1165 | 0.0104 | 0.1543 | 0.045* | |
O2 | −0.10300 (11) | −0.06580 (12) | 0.13280 (3) | 0.0294 (2) | |
O3 | 0.65407 (12) | 0.90621 (15) | 0.10227 (3) | 0.0431 (3) | |
H1O3 | 0.7207 | 0.9089 | 0.1129 | 0.065* | |
C1 | 0.41649 (17) | 0.72932 (17) | 0.14749 (4) | 0.0300 (3) | |
H1A | 0.3776 | 0.6804 | 0.1707 | 0.036* | |
H1B | 0.4653 | 0.6870 | 0.1357 | 0.036* | |
C2 | 0.51897 (18) | 0.87967 (18) | 0.15572 (4) | 0.0330 (3) | |
H2A | 0.4719 | 0.9207 | 0.1691 | 0.040* | |
H2B | 0.5926 | 0.8852 | 0.1716 | 0.040* | |
C3 | 0.58166 (15) | 0.96055 (17) | 0.12096 (4) | 0.0300 (3) | |
H3A | 0.6466 | 1.0583 | 0.1274 | 0.036* | |
C4 | 0.47387 (16) | 0.95453 (17) | 0.09408 (4) | 0.0314 (3) | |
C5 | 0.36344 (15) | 0.80196 (16) | 0.08805 (4) | 0.0276 (3) | |
H5A | 0.4118 | 0.7604 | 0.0751 | 0.033* | |
C6 | 0.24806 (18) | 0.78286 (18) | 0.06230 (5) | 0.0368 (4) | |
H6A | 0.1839 | 0.8038 | 0.0753 | 0.044* | |
H6B | 0.2869 | 0.8465 | 0.0414 | 0.044* | |
C7 | 0.17160 (16) | 0.63491 (17) | 0.04855 (4) | 0.0305 (3) | |
H7A | 0.0803 | 0.6141 | 0.0396 | 0.037* | |
H7B | 0.2224 | 0.6269 | 0.0276 | 0.037* | |
C8 | 0.15280 (15) | 0.52984 (16) | 0.07647 (4) | 0.0273 (3) | |
C9 | 0.21172 (16) | 0.56210 (16) | 0.10983 (4) | 0.0293 (3) | |
C10 | 0.29897 (15) | 0.71123 (16) | 0.12250 (4) | 0.0266 (3) | |
C11 | 0.18977 (18) | 0.45252 (16) | 0.13711 (4) | 0.0305 (3) | |
H11A | 0.1557 | 0.4717 | 0.1600 | 0.037* | |
H11B | 0.2801 | 0.4622 | 0.1426 | 0.037* | |
C12 | 0.09172 (17) | 0.30243 (16) | 0.12677 (4) | 0.0289 (3) | |
H12A | 0.1200 | 0.2428 | 0.1393 | 0.035* | |
H12B | −0.0022 | 0.2755 | 0.1348 | 0.035* | |
C13 | 0.09242 (15) | 0.28248 (15) | 0.08549 (4) | 0.0248 (3) | |
C14 | 0.05170 (15) | 0.38169 (16) | 0.06713 (4) | 0.0261 (3) | |
C15 | 0.03784 (19) | 0.33660 (18) | 0.02702 (4) | 0.0343 (4) | |
H15A | 0.1284 | 0.3796 | 0.0149 | 0.041* | |
H15B | −0.0227 | 0.3613 | 0.0135 | 0.041* | |
C16 | −0.02608 (18) | 0.17853 (17) | 0.02912 (4) | 0.0328 (3) | |
H16A | 0.0254 | 0.1486 | 0.0134 | 0.039* | |
H16B | −0.1226 | 0.1322 | 0.0209 | 0.039* | |
C17 | −0.01783 (15) | 0.14260 (16) | 0.06977 (4) | 0.0256 (3) | |
H17A | −0.1070 | 0.1187 | 0.0815 | 0.031* | |
C18 | 0.23593 (16) | 0.31412 (18) | 0.07350 (4) | 0.0328 (3) | |
H18A | 0.2655 | 0.2621 | 0.0886 | 0.049* | |
H18B | 0.3005 | 0.4123 | 0.0763 | 0.049* | |
H18C | 0.2332 | 0.2882 | 0.0479 | 0.049* | |
C19 | 0.20263 (18) | 0.7441 (2) | 0.14522 (5) | 0.0401 (4) | |
H19A | 0.1593 | 0.6757 | 0.1646 | 0.060* | |
H19B | 0.1319 | 0.7422 | 0.1293 | 0.060* | |
H19C | 0.2560 | 0.8353 | 0.1561 | 0.060* | |
C20 | 0.00323 (16) | 0.01791 (16) | 0.07414 (4) | 0.0263 (3) | |
H20A | 0.0943 | 0.0414 | 0.0637 | 0.032* | |
C21 | 0.00184 (15) | −0.01382 (16) | 0.11427 (4) | 0.0253 (3) | |
C22 | −0.10897 (16) | −0.10907 (16) | 0.05432 (4) | 0.0273 (3) | |
H22A | −0.1985 | −0.1361 | 0.0657 | 0.033* | |
H22B | −0.1133 | −0.0848 | 0.0286 | 0.033* | |
C23 | −0.08548 (18) | −0.23138 (18) | 0.05517 (5) | 0.0339 (3) | |
H23A | 0.0057 | −0.2034 | 0.0447 | 0.041* | |
H23B | −0.0852 | −0.2583 | 0.0808 | 0.041* | |
C24 | −0.19244 (19) | −0.35336 (18) | 0.03441 (4) | 0.0331 (3) | |
H24A | −0.1793 | −0.3524 | 0.0088 | 0.040* | |
C25 | −0.30231 (19) | −0.46146 (18) | 0.04752 (4) | 0.0353 (4) | |
C26 | −0.3398 (2) | −0.4808 (3) | 0.08726 (5) | 0.0611 (6) | |
H26A | −0.2694 | −0.4035 | 0.1012 | 0.092* | |
H26B | −0.3461 | −0.5660 | 0.0959 | 0.092* | |
H26C | −0.4283 | −0.4856 | 0.0906 | 0.092* | |
C27 | −0.4008 (2) | −0.5768 (2) | 0.02355 (6) | 0.0502 (5) | |
H27A | −0.3706 | −0.5563 | −0.0019 | 0.075* | |
H27B | −0.4923 | −0.5877 | 0.0259 | 0.075* | |
H27C | −0.4039 | −0.6618 | 0.0310 | 0.075* | |
C28 | 0.54466 (19) | 1.0165 (2) | 0.05767 (5) | 0.0461 (5) | |
H28A | 0.6284 | 1.1039 | 0.0621 | 0.069* | |
H28B | 0.4828 | 1.0316 | 0.0421 | 0.069* | |
H28C | 0.5680 | 0.9534 | 0.0455 | 0.069* | |
C29 | 0.4192 (2) | 1.04643 (19) | 0.10886 (6) | 0.0443 (4) | |
H29A | 0.4931 | 1.1421 | 0.1088 | 0.066* | |
H29B | 0.3858 | 1.0187 | 0.1338 | 0.066* | |
H29C | 0.3441 | 1.0367 | 0.0933 | 0.066* | |
C30 | −0.08957 (17) | 0.35873 (17) | 0.07938 (5) | 0.0346 (4) | |
H30A | −0.1093 | 0.4232 | 0.0666 | 0.052* | |
H30B | −0.0884 | 0.3737 | 0.1057 | 0.052* | |
H30C | −0.1605 | 0.2648 | 0.0736 | 0.052* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0283 (5) | 0.0419 (6) | 0.0230 (5) | 0.0203 (5) | −0.0021 (4) | −0.0007 (4) |
O2 | 0.0250 (5) | 0.0409 (6) | 0.0199 (4) | 0.0146 (5) | −0.0005 (4) | 0.0017 (4) |
O3 | 0.0251 (6) | 0.0665 (9) | 0.0380 (6) | 0.0232 (6) | −0.0050 (5) | −0.0111 (6) |
C1 | 0.0328 (8) | 0.0353 (8) | 0.0182 (6) | 0.0144 (7) | −0.0059 (6) | −0.0014 (6) |
C2 | 0.0327 (8) | 0.0378 (9) | 0.0218 (7) | 0.0127 (7) | −0.0062 (6) | −0.0057 (6) |
C3 | 0.0222 (7) | 0.0365 (8) | 0.0251 (7) | 0.0099 (6) | −0.0041 (6) | −0.0042 (6) |
C4 | 0.0229 (7) | 0.0325 (8) | 0.0305 (7) | 0.0076 (7) | −0.0057 (6) | 0.0028 (6) |
C5 | 0.0218 (7) | 0.0295 (8) | 0.0242 (6) | 0.0072 (6) | −0.0042 (5) | 0.0037 (6) |
C6 | 0.0283 (8) | 0.0328 (9) | 0.0374 (8) | 0.0064 (7) | −0.0098 (7) | 0.0096 (7) |
C7 | 0.0249 (7) | 0.0347 (8) | 0.0230 (6) | 0.0084 (6) | −0.0053 (6) | 0.0061 (6) |
C8 | 0.0209 (7) | 0.0302 (8) | 0.0254 (7) | 0.0087 (6) | −0.0014 (5) | 0.0055 (6) |
C9 | 0.0287 (8) | 0.0312 (8) | 0.0220 (6) | 0.0105 (6) | −0.0021 (6) | 0.0042 (6) |
C10 | 0.0225 (7) | 0.0302 (8) | 0.0239 (6) | 0.0109 (6) | −0.0013 (6) | 0.0032 (6) |
C11 | 0.0377 (9) | 0.0310 (8) | 0.0190 (6) | 0.0143 (7) | −0.0015 (6) | 0.0013 (6) |
C12 | 0.0347 (8) | 0.0301 (8) | 0.0183 (7) | 0.0134 (7) | −0.0020 (6) | 0.0029 (5) |
C13 | 0.0220 (7) | 0.0303 (7) | 0.0195 (6) | 0.0111 (6) | 0.0004 (5) | 0.0038 (5) |
C14 | 0.0235 (7) | 0.0306 (8) | 0.0192 (6) | 0.0099 (6) | −0.0025 (5) | 0.0038 (6) |
C15 | 0.0419 (9) | 0.0345 (9) | 0.0199 (7) | 0.0141 (7) | −0.0068 (6) | 0.0016 (6) |
C16 | 0.0407 (9) | 0.0358 (9) | 0.0194 (7) | 0.0172 (7) | −0.0057 (6) | −0.0002 (6) |
C17 | 0.0243 (7) | 0.0324 (8) | 0.0184 (6) | 0.0129 (6) | −0.0006 (5) | 0.0004 (5) |
C18 | 0.0236 (7) | 0.0394 (9) | 0.0321 (8) | 0.0133 (7) | 0.0016 (6) | 0.0028 (7) |
C19 | 0.0320 (8) | 0.0386 (9) | 0.0454 (9) | 0.0143 (7) | 0.0094 (7) | 0.0034 (8) |
C20 | 0.0256 (7) | 0.0335 (8) | 0.0195 (6) | 0.0145 (6) | 0.0005 (5) | 0.0003 (6) |
C21 | 0.0256 (7) | 0.0292 (8) | 0.0224 (6) | 0.0148 (6) | −0.0021 (5) | −0.0018 (6) |
C22 | 0.0313 (8) | 0.0343 (8) | 0.0179 (6) | 0.0177 (7) | −0.0018 (5) | −0.0019 (6) |
C23 | 0.0355 (8) | 0.0376 (9) | 0.0331 (8) | 0.0216 (7) | −0.0006 (7) | 0.0003 (7) |
C24 | 0.0449 (9) | 0.0356 (8) | 0.0255 (7) | 0.0251 (8) | 0.0015 (7) | −0.0013 (6) |
C25 | 0.0400 (9) | 0.0388 (9) | 0.0309 (8) | 0.0224 (8) | −0.0010 (7) | 0.0012 (7) |
C26 | 0.0495 (12) | 0.0782 (16) | 0.0365 (10) | 0.0176 (12) | 0.0085 (9) | 0.0057 (10) |
C27 | 0.0547 (12) | 0.0410 (10) | 0.0492 (10) | 0.0196 (10) | −0.0079 (9) | −0.0037 (8) |
C28 | 0.0343 (9) | 0.0401 (10) | 0.0347 (8) | −0.0033 (8) | −0.0102 (7) | 0.0079 (7) |
C29 | 0.0350 (9) | 0.0337 (9) | 0.0607 (11) | 0.0145 (7) | −0.0089 (8) | −0.0001 (8) |
C30 | 0.0245 (7) | 0.0285 (8) | 0.0465 (9) | 0.0101 (6) | −0.0018 (7) | 0.0053 (7) |
O1—C21 | 1.3128 (18) | C15—C16 | 1.555 (2) |
O1—H1O1 | 0.9626 | C15—H15A | 0.9900 |
O2—C21 | 1.2293 (18) | C15—H15B | 0.9900 |
O3—C3 | 1.419 (2) | C16—C17 | 1.5606 (19) |
O3—H1O3 | 0.8340 | C16—H16A | 0.9900 |
C1—C2 | 1.531 (2) | C16—H16B | 0.9900 |
C1—C10 | 1.539 (2) | C17—C20 | 1.547 (2) |
C1—H1A | 0.9900 | C17—H17A | 1.0000 |
C1—H1B | 0.9900 | C18—H18A | 0.9800 |
C2—C3 | 1.521 (2) | C18—H18B | 0.9800 |
C2—H2A | 0.9900 | C18—H18C | 0.9800 |
C2—H2B | 0.9900 | C19—H19A | 0.9800 |
C3—C4 | 1.541 (2) | C19—H19B | 0.9800 |
C3—H3A | 1.0000 | C19—H19C | 0.9800 |
C4—C28 | 1.534 (2) | C20—C21 | 1.5139 (18) |
C4—C29 | 1.545 (3) | C20—C22 | 1.539 (2) |
C4—C5 | 1.555 (2) | C20—H20A | 1.0000 |
C5—C6 | 1.534 (2) | C22—C23 | 1.530 (2) |
C5—C10 | 1.5591 (19) | C22—H22A | 0.9900 |
C5—H5A | 1.0000 | C22—H22B | 0.9900 |
C6—C7 | 1.531 (2) | C23—C24 | 1.506 (2) |
C6—H6A | 0.9900 | C23—H23A | 0.9900 |
C6—H6B | 0.9900 | C23—H23B | 0.9900 |
C7—C8 | 1.499 (2) | C24—C25 | 1.320 (3) |
C7—H7A | 0.9900 | C24—H24A | 0.9500 |
C7—H7B | 0.9900 | C25—C27 | 1.502 (3) |
C8—C9 | 1.353 (2) | C25—C26 | 1.504 (2) |
C8—C14 | 1.518 (2) | C26—H26A | 0.9800 |
C9—C11 | 1.512 (2) | C26—H26B | 0.9800 |
C9—C10 | 1.536 (2) | C26—H26C | 0.9800 |
C10—C19 | 1.555 (2) | C27—H27A | 0.9800 |
C11—C12 | 1.537 (2) | C27—H27B | 0.9800 |
C11—H11A | 0.9900 | C27—H27C | 0.9800 |
C11—H11B | 0.9900 | C28—H28A | 0.9800 |
C12—C13 | 1.5319 (18) | C28—H28B | 0.9800 |
C12—H12A | 0.9900 | C28—H28C | 0.9800 |
C12—H12B | 0.9900 | C29—H29A | 0.9800 |
C13—C18 | 1.537 (2) | C29—H29B | 0.9800 |
C13—C17 | 1.551 (2) | C29—H29C | 0.9800 |
C13—C14 | 1.559 (2) | C30—H30A | 0.9800 |
C14—C15 | 1.539 (2) | C30—H30B | 0.9800 |
C14—C30 | 1.548 (2) | C30—H30C | 0.9800 |
C21—O1—H1O1 | 111.0 | C16—C15—H15B | 110.9 |
C3—O3—H1O3 | 117.4 | H15A—C15—H15B | 109.0 |
C2—C1—C10 | 112.80 (14) | C15—C16—C17 | 106.94 (12) |
C2—C1—H1A | 109.0 | C15—C16—H16A | 110.3 |
C10—C1—H1A | 109.0 | C17—C16—H16A | 110.3 |
C2—C1—H1B | 109.0 | C15—C16—H16B | 110.3 |
C10—C1—H1B | 109.0 | C17—C16—H16B | 110.3 |
H1A—C1—H1B | 107.8 | H16A—C16—H16B | 108.6 |
C3—C2—C1 | 111.47 (12) | C20—C17—C13 | 118.46 (12) |
C3—C2—H2A | 109.3 | C20—C17—C16 | 113.03 (12) |
C1—C2—H2A | 109.3 | C13—C17—C16 | 102.30 (12) |
C3—C2—H2B | 109.3 | C20—C17—H17A | 107.5 |
C1—C2—H2B | 109.3 | C13—C17—H17A | 107.5 |
H2A—C2—H2B | 108.0 | C16—C17—H17A | 107.5 |
O3—C3—C2 | 109.98 (14) | C13—C18—H18A | 109.5 |
O3—C3—C4 | 106.45 (12) | C13—C18—H18B | 109.5 |
C2—C3—C4 | 112.99 (13) | H18A—C18—H18B | 109.5 |
O3—C3—H3A | 109.1 | C13—C18—H18C | 109.5 |
C2—C3—H3A | 109.1 | H18A—C18—H18C | 109.5 |
C4—C3—H3A | 109.1 | H18B—C18—H18C | 109.5 |
C28—C4—C3 | 108.55 (13) | C10—C19—H19A | 109.5 |
C28—C4—C29 | 106.96 (16) | C10—C19—H19B | 109.5 |
C3—C4—C29 | 108.45 (14) | H19A—C19—H19B | 109.5 |
C28—C4—C5 | 109.05 (13) | C10—C19—H19C | 109.5 |
C3—C4—C5 | 108.52 (13) | H19A—C19—H19C | 109.5 |
C29—C4—C5 | 115.14 (14) | H19B—C19—H19C | 109.5 |
C6—C5—C4 | 113.39 (13) | C21—C20—C22 | 109.46 (12) |
C6—C5—C10 | 108.84 (12) | C21—C20—C17 | 109.12 (12) |
C4—C5—C10 | 117.61 (12) | C22—C20—C17 | 111.61 (12) |
C6—C5—H5A | 105.3 | C21—C20—H20A | 108.9 |
C4—C5—H5A | 105.3 | C22—C20—H20A | 108.9 |
C10—C5—H5A | 105.3 | C17—C20—H20A | 108.9 |
C7—C6—C5 | 109.39 (14) | O2—C21—O1 | 121.94 (12) |
C7—C6—H6A | 109.8 | O2—C21—C20 | 122.99 (13) |
C5—C6—H6A | 109.8 | O1—C21—C20 | 115.06 (12) |
C7—C6—H6B | 109.8 | C23—C22—C20 | 113.39 (13) |
C5—C6—H6B | 109.8 | C23—C22—H22A | 108.9 |
H6A—C6—H6B | 108.2 | C20—C22—H22A | 108.9 |
C8—C7—C6 | 114.61 (13) | C23—C22—H22B | 108.9 |
C8—C7—H7A | 108.6 | C20—C22—H22B | 108.9 |
C6—C7—H7A | 108.6 | H22A—C22—H22B | 107.7 |
C8—C7—H7B | 108.6 | C24—C23—C22 | 113.12 (14) |
C6—C7—H7B | 108.6 | C24—C23—H23A | 109.0 |
H7A—C7—H7B | 107.6 | C22—C23—H23A | 109.0 |
C9—C8—C7 | 123.32 (14) | C24—C23—H23B | 109.0 |
C9—C8—C14 | 119.87 (13) | C22—C23—H23B | 109.0 |
C7—C8—C14 | 116.57 (12) | H23A—C23—H23B | 107.8 |
C8—C9—C11 | 121.45 (14) | C25—C24—C23 | 127.76 (14) |
C8—C9—C10 | 121.88 (13) | C25—C24—H24A | 116.1 |
C11—C9—C10 | 116.62 (12) | C23—C24—H24A | 116.1 |
C9—C10—C1 | 111.30 (13) | C24—C25—C27 | 122.20 (16) |
C9—C10—C19 | 106.40 (13) | C24—C25—C26 | 123.61 (17) |
C1—C10—C19 | 107.89 (13) | C27—C25—C26 | 114.19 (17) |
C9—C10—C5 | 107.84 (12) | C25—C26—H26A | 109.5 |
C1—C10—C5 | 107.95 (12) | C25—C26—H26B | 109.5 |
C19—C10—C5 | 115.50 (13) | H26A—C26—H26B | 109.5 |
C9—C11—C12 | 118.07 (12) | C25—C26—H26C | 109.5 |
C9—C11—H11A | 107.8 | H26A—C26—H26C | 109.5 |
C12—C11—H11A | 107.8 | H26B—C26—H26C | 109.5 |
C9—C11—H11B | 107.8 | C25—C27—H27A | 109.5 |
C12—C11—H11B | 107.8 | C25—C27—H27B | 109.5 |
H11A—C11—H11B | 107.1 | H27A—C27—H27B | 109.5 |
C13—C12—C11 | 110.63 (12) | C25—C27—H27C | 109.5 |
C13—C12—H12A | 109.5 | H27A—C27—H27C | 109.5 |
C11—C12—H12A | 109.5 | H27B—C27—H27C | 109.5 |
C13—C12—H12B | 109.5 | C4—C28—H28A | 109.5 |
C11—C12—H12B | 109.5 | C4—C28—H28B | 109.5 |
H12A—C12—H12B | 108.1 | H28A—C28—H28B | 109.5 |
C12—C13—C18 | 109.33 (12) | C4—C28—H28C | 109.5 |
C12—C13—C17 | 117.18 (11) | H28A—C28—H28C | 109.5 |
C18—C13—C17 | 110.19 (13) | H28B—C28—H28C | 109.5 |
C12—C13—C14 | 107.28 (12) | C4—C29—H29A | 109.5 |
C18—C13—C14 | 111.32 (12) | C4—C29—H29B | 109.5 |
C17—C13—C14 | 101.25 (11) | H29A—C29—H29B | 109.5 |
C8—C14—C15 | 118.41 (13) | C4—C29—H29C | 109.5 |
C8—C14—C30 | 105.21 (13) | H29A—C29—H29C | 109.5 |
C15—C14—C30 | 107.25 (13) | H29B—C29—H29C | 109.5 |
C8—C14—C13 | 111.32 (12) | C14—C30—H30A | 109.5 |
C15—C14—C13 | 101.18 (12) | C14—C30—H30B | 109.5 |
C30—C14—C13 | 113.73 (12) | H30A—C30—H30B | 109.5 |
C14—C15—C16 | 104.10 (12) | C14—C30—H30C | 109.5 |
C14—C15—H15A | 110.9 | H30A—C30—H30C | 109.5 |
C16—C15—H15A | 110.9 | H30B—C30—H30C | 109.5 |
C14—C15—H15B | 110.9 | ||
C10—C1—C2—C3 | −58.31 (18) | C11—C12—C13—C17 | −170.39 (13) |
C1—C2—C3—O3 | −61.29 (17) | C11—C12—C13—C14 | −57.48 (16) |
C1—C2—C3—C4 | 57.51 (19) | C9—C8—C14—C15 | −151.76 (16) |
O3—C3—C4—C28 | −49.08 (18) | C7—C8—C14—C15 | 33.7 (2) |
C2—C3—C4—C28 | −169.90 (15) | C9—C8—C14—C30 | 88.46 (17) |
O3—C3—C4—C29 | −164.95 (14) | C7—C8—C14—C30 | −86.04 (16) |
C2—C3—C4—C29 | 74.23 (17) | C9—C8—C14—C13 | −35.2 (2) |
O3—C3—C4—C5 | 69.31 (16) | C7—C8—C14—C13 | 150.34 (13) |
C2—C3—C4—C5 | −51.51 (18) | C12—C13—C14—C8 | 60.59 (15) |
C28—C4—C5—C6 | −63.26 (19) | C18—C13—C14—C8 | −58.98 (16) |
C3—C4—C5—C6 | 178.67 (14) | C17—C13—C14—C8 | −176.07 (11) |
C29—C4—C5—C6 | 56.93 (19) | C12—C13—C14—C15 | −172.69 (12) |
C28—C4—C5—C10 | 168.18 (15) | C18—C13—C14—C15 | 67.73 (15) |
C3—C4—C5—C10 | 50.10 (18) | C17—C13—C14—C15 | −49.35 (14) |
C29—C4—C5—C10 | −71.63 (18) | C12—C13—C14—C30 | −58.04 (16) |
C4—C5—C6—C7 | 162.20 (13) | C18—C13—C14—C30 | −177.61 (13) |
C10—C5—C6—C7 | −64.86 (17) | C17—C13—C14—C30 | 65.30 (15) |
C5—C6—C7—C8 | 38.2 (2) | C8—C14—C15—C16 | 159.15 (14) |
C6—C7—C8—C9 | −7.5 (2) | C30—C14—C15—C16 | −82.13 (15) |
C6—C7—C8—C14 | 166.80 (14) | C13—C14—C15—C16 | 37.27 (15) |
C7—C8—C9—C11 | 179.99 (15) | C14—C15—C16—C17 | −11.73 (17) |
C14—C8—C9—C11 | 5.9 (2) | C12—C13—C17—C20 | −77.28 (17) |
C7—C8—C9—C10 | 2.6 (2) | C18—C13—C17—C20 | 48.55 (16) |
C14—C8—C9—C10 | −171.46 (14) | C14—C13—C17—C20 | 166.46 (12) |
C8—C9—C10—C1 | −146.20 (15) | C12—C13—C17—C16 | 157.72 (13) |
C11—C9—C10—C1 | 36.34 (18) | C18—C13—C17—C16 | −76.45 (14) |
C8—C9—C10—C19 | 96.51 (18) | C14—C13—C17—C16 | 41.45 (14) |
C11—C9—C10—C19 | −80.96 (17) | C15—C16—C17—C20 | −147.10 (14) |
C8—C9—C10—C5 | −28.0 (2) | C15—C16—C17—C13 | −18.60 (16) |
C11—C9—C10—C5 | 154.56 (14) | C13—C17—C20—C21 | 63.61 (16) |
C2—C1—C10—C9 | 170.77 (12) | C16—C17—C20—C21 | −176.81 (13) |
C2—C1—C10—C19 | −72.85 (16) | C13—C17—C20—C22 | −175.29 (11) |
C2—C1—C10—C5 | 52.61 (17) | C16—C17—C20—C22 | −55.71 (17) |
C6—C5—C10—C9 | 58.30 (17) | C22—C20—C21—O2 | −49.73 (19) |
C4—C5—C10—C9 | −171.02 (13) | C17—C20—C21—O2 | 72.68 (18) |
C6—C5—C10—C1 | 178.66 (14) | C22—C20—C21—O1 | 131.25 (14) |
C4—C5—C10—C1 | −50.65 (18) | C17—C20—C21—O1 | −106.34 (15) |
C6—C5—C10—C19 | −60.53 (18) | C21—C20—C22—C23 | −64.01 (16) |
C4—C5—C10—C19 | 70.16 (18) | C17—C20—C22—C23 | 175.09 (13) |
C8—C9—C11—C12 | −3.3 (2) | C20—C22—C23—C24 | −177.61 (12) |
C10—C9—C11—C12 | 174.14 (14) | C22—C23—C24—C25 | −97.4 (2) |
C9—C11—C12—C13 | 30.5 (2) | C23—C24—C25—C27 | −179.74 (18) |
C11—C12—C13—C18 | 63.36 (17) | C23—C24—C25—C26 | −0.1 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O1···O2i | 0.96 | 1.74 | 2.6762 (14) | 162 |
O3—H1O3···O2ii | 0.83 | 2.00 | 2.828 (2) | 172 |
C12—H12A···O1 | 0.99 | 2.55 | 3.367 (2) | 139 |
C22—H22A···O3iii | 0.99 | 2.36 | 3.276 (2) | 153 |
Symmetry codes: (i) −x, −x+y, −z+1/3; (ii) x+1, y+1, z; (iii) x−1, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | C30H48O3 |
Mr | 456.68 |
Crystal system, space group | Trigonal, P3121 |
Temperature (K) | 100 |
a, c (Å) | 11.2794 (2), 36.6986 (6) |
V (Å3) | 4043.45 (12) |
Z | 6 |
Radiation type | Cu Kα |
µ (mm−1) | 0.54 |
Crystal size (mm) | 0.29 × 0.24 × 0.13 |
Data collection | |
Diffractometer | Bruker SMART APEXII DUO CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.859, 0.935 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 29022, 5154, 5062 |
Rint | 0.040 |
(sin θ/λ)max (Å−1) | 0.616 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.038, 0.104, 0.97 |
No. of reflections | 5154 |
No. of parameters | 305 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.34, −0.15 |
Absolute structure | Flack (1983), 2099 Friedel pairs |
Absolute structure parameter | −0.35 (19) |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O1···O2i | 0.96 | 1.74 | 2.6762 (14) | 162 |
O3—H1O3···O2ii | 0.83 | 2.00 | 2.828 (2) | 172 |
C12—H12A···O1 | 0.99 | 2.55 | 3.367 (2) | 139 |
C22—H22A···O3iii | 0.99 | 2.36 | 3.276 (2) | 153 |
Symmetry codes: (i) −x, −x+y, −z+1/3; (ii) x+1, y+1, z; (iii) x−1, y−1, z. |
Footnotes
‡Thomson Reuters ResearcherID: A-3561-2009.
Acknowledgements
RSTK thanks the H.E.J. Research Institute of Chemistry, International Center for Chemical and Biological Sciences, University of Karachi, for providing research facilities. SY thanks Universiti Sains Malaysia (USM) for providing X-ray diffraction research facilities at the School of Physics. HKF thanks the Malaysian Government and USM for the Research University Grant No. 1001/PFIZIK/811160.
References
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3α-Hydroxytirucalla-8,24-dien-21-oic acid (or epielemadienolic acid) is a known triterpene derivative that was isolated from the resin of canarium schweinfurthii, a tree growing in equatorial forest regions from Cameroon, Central African Republic, Gabon to Congo (Tchiégang et al., 2001). The plant is used for a variety of ailments including malaria, fever and diarrhea (Atawodi, 2010; Dongmo et al. (2010). As a part of our going research on the medicinaly important plants, the title compound was isolated from the dichloromethane soluble part and the structure was established on the basis of X-ray diffraction studies. The space group (P3121) and cell parameters were found to be similar to the prevoiusly reported 3α-hydroxy-tirucalla-7,24-dien-21-oic acid (Mora et al.. 2001). However the bond lengths of C7-C8 [1.499 (2) Å] and C8-C9 [1.353 (2) Å] were found to be different from those reported for the previously reported triterpene [C7-C8 = 1.353 (2) Å and C8-C9 = 1.49 Å]. The difference in the bond lengths clearly indicates that the title compound is an isomer of previously reported 3α-hydroxy-tirucalla-7,24-dien-21-oic acid, having C8-C9 double-bond/olefin instead C7-C8 double-bond/olefin. The molecular structure showed that the trans fused rings A/B/C and D adopt chair [Q= 0.549 (2) Å, θ = 4.5 (2)° and ϕ = 51 (2)°], half-chair [Q = 0.545 (2) Å, θ = 50.0 (2)° and ϕ = 8.3 (3)°], half-chair [Q = 0.524 (19) Å, θ = 129.7 (2)° and ϕ = 63.6 (2)°] and envelope [Q = 0.487 (2) Å and ϕ = 13.5 (2)°] conformations respectively. The half-chair and envelope conformations of rings C & D are stabilized by C12—H12A···O1 intramolecular hydrogen bond. In the crystal structure, the molecules are linked to form infinite chains via O3—H1O3···O2, O1—H1O1···O2 and C24—H22A···O3 hydrogen bonds (symmetry codes as in Table 1) to form (001) sheets. (Fig. 2).