metal-organic compounds
(4,5-Diazafluoren-9-one-κ2N,N′)bis(thiocyanato-κS)mercury(II)
aDepartment of Chemistry, Shahid Beheshti University, G. C., Evin, Tehran 1983963113, Iran
*Correspondence e-mail: n-safari@cc.sbu.ac.ir
In the title compound, [Hg(NCS)2(C11H6N2O)], the HgII atom, lying on a twofold rotation axis, is four-coordinated in a distorted tetrahedral geometry by an N,N′-bidentate diazafluoren-9-one ligand and two thiocyanate anions. In the crystal, intermolecular C—H⋯N and C—H⋯O hydrogen bonds are effective in the stabilization of the structure.
Related literature
For general background to metal complexes with diazafluoren-9-one ligands, see: Biju & Rajasekharan (2008); Kulkarni et al. (2002); Menon & Rajasekharan (1998); Shi et al. (1995); Wu & Xu (2004); Zhang et al. (2004). For related structures, see: Ravikumar & Lakshmi (1994); Safari et al. (2009). For the synthesis of the ligand, see: Henderson et al. (1984).
Experimental
Crystal data
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Refinement
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Data collection: X-AREA (Stoe & Cie, 2005); cell X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536811008142/hy2412sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811008142/hy2412Isup2.hkl
For the preparation of the title compound, a solution of dafone (0.13 g, 0.71 mmol) in methanol (20 ml) was added to a solution of Hg(SCN)2 (0.23 g, 0.71 mmol) in methanol (20 ml) at room temperature and the yellow powder was formed. Crystals suitable for X-ray diffraction were obtained by methanol vapor diffusion into a DMSO solution of the complex. The crystals were isolated after one week (yield: 0.28 g, 79%).
H atoms were positioned geometrically and refined as riding atoms, with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C). The highest residual electron density was found at 0.90 Å from Hg1 atom and the deepest hole at 0.84 Å from Hg1 atom.
Data collection: X-AREA (Stoe & Cie, 2005); cell
X-AREA (Stoe & Cie, 2005); data reduction: X-AREA (Stoe & Cie, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).[Hg(NCS)2(C11H6N2O)] | F(000) = 928 |
Mr = 498.95 | Dx = 2.340 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 1903 reflections |
a = 10.570 (2) Å | θ = 2.3–29.1° |
b = 16.112 (3) Å | µ = 11.17 mm−1 |
c = 8.3390 (17) Å | T = 298 K |
β = 94.35 (3)° | Block, yellow |
V = 1416.1 (5) Å3 | 0.45 × 0.30 × 0.25 mm |
Z = 4 |
Stoe IPDS-2T diffractometer | 1903 independent reflections |
Radiation source: fine-focus sealed tube | 1737 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.098 |
ω scans | θmax = 29.1°, θmin = 2.3° |
Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2005) | h = −14→14 |
Tmin = 0.023, Tmax = 0.059 | k = −19→22 |
4787 measured reflections | l = −11→9 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.048 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.118 | H-atom parameters constrained |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0771P)2] where P = (Fo2 + 2Fc2)/3 |
1903 reflections | (Δ/σ)max < 0.001 |
97 parameters | Δρmax = 4.61 e Å−3 |
0 restraints | Δρmin = −1.82 e Å−3 |
[Hg(NCS)2(C11H6N2O)] | V = 1416.1 (5) Å3 |
Mr = 498.95 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 10.570 (2) Å | µ = 11.17 mm−1 |
b = 16.112 (3) Å | T = 298 K |
c = 8.3390 (17) Å | 0.45 × 0.30 × 0.25 mm |
β = 94.35 (3)° |
Stoe IPDS-2T diffractometer | 1903 independent reflections |
Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2005) | 1737 reflections with I > 2σ(I) |
Tmin = 0.023, Tmax = 0.059 | Rint = 0.098 |
4787 measured reflections |
R[F2 > 2σ(F2)] = 0.048 | 0 restraints |
wR(F2) = 0.118 | H-atom parameters constrained |
S = 1.09 | Δρmax = 4.61 e Å−3 |
1903 reflections | Δρmin = −1.82 e Å−3 |
97 parameters |
x | y | z | Uiso*/Ueq | ||
C7 | 0.7118 (6) | 0.0950 (5) | 0.0048 (8) | 0.0493 (13) | |
Hg1 | 0.5000 | 0.072315 (18) | 0.2500 | 0.04567 (15) | |
N1 | 0.4449 (4) | 0.1960 (3) | 0.0815 (6) | 0.0365 (9) | |
C1 | 0.4721 (4) | 0.2635 (3) | 0.1663 (6) | 0.0320 (9) | |
C2 | 0.3956 (5) | 0.2094 (4) | −0.0707 (7) | 0.0422 (11) | |
H2 | 0.3735 | 0.1637 | −0.1350 | 0.051* | |
C5 | 0.4558 (5) | 0.3449 (3) | 0.1142 (7) | 0.0377 (10) | |
C3 | 0.3766 (6) | 0.2879 (4) | −0.1349 (7) | 0.0453 (12) | |
H3 | 0.3438 | 0.2937 | −0.2409 | 0.054* | |
C4 | 0.4063 (5) | 0.3591 (4) | −0.0419 (8) | 0.0456 (12) | |
H4 | 0.3935 | 0.4124 | −0.0827 | 0.055* | |
S1 | 0.68555 (17) | 0.01847 (11) | 0.1348 (2) | 0.0576 (4) | |
O1 | 0.5000 | 0.4758 (4) | 0.2500 | 0.0586 (17) | |
C6 | 0.5000 | 0.4016 (6) | 0.2500 | 0.0432 (17) | |
N2 | 0.7356 (8) | 0.1448 (6) | −0.0831 (10) | 0.083 (2) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C7 | 0.049 (3) | 0.058 (4) | 0.041 (3) | 0.004 (3) | 0.005 (2) | −0.002 (3) |
Hg1 | 0.0541 (2) | 0.03049 (19) | 0.0543 (2) | 0.000 | 0.01618 (14) | 0.000 |
N1 | 0.0374 (19) | 0.029 (2) | 0.043 (2) | 0.0004 (16) | 0.0032 (16) | 0.0006 (17) |
C1 | 0.0334 (19) | 0.022 (2) | 0.040 (3) | 0.0006 (16) | 0.0044 (17) | 0.0012 (16) |
C2 | 0.046 (3) | 0.040 (3) | 0.040 (3) | 0.004 (2) | 0.002 (2) | 0.001 (2) |
C5 | 0.035 (2) | 0.028 (2) | 0.050 (3) | 0.0014 (18) | 0.0046 (19) | 0.005 (2) |
C3 | 0.046 (3) | 0.047 (3) | 0.043 (3) | 0.007 (2) | 0.005 (2) | 0.007 (2) |
C4 | 0.046 (3) | 0.035 (3) | 0.056 (3) | 0.005 (2) | 0.006 (2) | 0.015 (2) |
S1 | 0.0623 (9) | 0.0412 (8) | 0.0715 (11) | 0.0171 (7) | 0.0201 (8) | 0.0072 (7) |
O1 | 0.072 (4) | 0.023 (3) | 0.081 (5) | 0.000 | 0.007 (4) | 0.000 |
C6 | 0.038 (3) | 0.033 (4) | 0.060 (5) | 0.000 | 0.011 (3) | 0.000 |
N2 | 0.077 (4) | 0.104 (7) | 0.070 (5) | 0.003 (4) | 0.021 (3) | 0.025 (4) |
C7—N2 | 1.128 (11) | C2—H2 | 0.9300 |
C7—S1 | 1.679 (8) | C5—C4 | 1.385 (8) |
Hg1—S1 | 2.4098 (17) | C5—C6 | 1.502 (8) |
Hg1—N1 | 2.483 (5) | C3—C4 | 1.407 (9) |
N1—C1 | 1.316 (7) | C3—H3 | 0.9300 |
N1—C2 | 1.352 (7) | C4—H4 | 0.9300 |
C1—C5 | 1.388 (6) | O1—C6 | 1.195 (12) |
C1—C1i | 1.473 (10) | C6—C5i | 1.502 (8) |
C2—C3 | 1.382 (8) | ||
N2—C7—S1 | 176.4 (8) | C3—C2—H2 | 118.5 |
S1i—Hg1—S1 | 137.80 (9) | C4—C5—C1 | 118.7 (5) |
S1i—Hg1—N1i | 103.08 (11) | C4—C5—C6 | 132.9 (5) |
S1—Hg1—N1i | 110.60 (12) | C1—C5—C6 | 108.4 (5) |
S1i—Hg1—N1 | 110.60 (12) | C2—C3—C4 | 120.9 (5) |
S1—Hg1—N1 | 103.08 (11) | C2—C3—H3 | 119.6 |
N1i—Hg1—N1 | 73.2 (2) | C4—C3—H3 | 119.6 |
C1—N1—C2 | 115.2 (5) | C5—C4—C3 | 115.8 (5) |
C1—N1—Hg1 | 109.0 (3) | C5—C4—H4 | 122.1 |
C2—N1—Hg1 | 135.7 (4) | C3—C4—H4 | 122.1 |
N1—C1—C5 | 126.5 (5) | C7—S1—Hg1 | 99.9 (2) |
N1—C1—C1i | 124.4 (3) | O1—C6—C5i | 127.5 (4) |
C5—C1—C1i | 109.1 (3) | O1—C6—C5 | 127.5 (4) |
N1—C2—C3 | 122.9 (6) | C5i—C6—C5 | 105.0 (7) |
N1—C2—H2 | 118.5 | ||
S1i—Hg1—N1—C1 | 97.7 (3) | N1—C1—C5—C6 | −179.7 (4) |
S1—Hg1—N1—C1 | −108.1 (3) | C1i—C1—C5—C6 | −0.8 (6) |
N1i—Hg1—N1—C1 | −0.3 (2) | N1—C2—C3—C4 | −1.1 (9) |
S1i—Hg1—N1—C2 | −82.2 (5) | C1—C5—C4—C3 | 0.0 (8) |
S1—Hg1—N1—C2 | 71.9 (5) | C6—C5—C4—C3 | 179.5 (5) |
N1i—Hg1—N1—C2 | 179.8 (6) | C2—C3—C4—C5 | 0.6 (9) |
C2—N1—C1—C5 | −0.5 (8) | S1i—Hg1—S1—C7 | 150.1 (3) |
Hg1—N1—C1—C5 | 179.5 (4) | N1i—Hg1—S1—C7 | −69.2 (3) |
C2—N1—C1—C1i | −179.2 (6) | N1—Hg1—S1—C7 | 7.5 (3) |
Hg1—N1—C1—C1i | 0.8 (7) | C4—C5—C6—O1 | 0.7 (7) |
C1—N1—C2—C3 | 1.1 (8) | C1—C5—C6—O1 | −179.7 (3) |
Hg1—N1—C2—C3 | −179.0 (4) | C4—C5—C6—C5i | −179.3 (7) |
N1—C1—C5—C4 | 0.0 (8) | C1—C5—C6—C5i | 0.3 (3) |
C1i—C1—C5—C4 | 178.9 (5) |
Symmetry code: (i) −x+1, y, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2···N2ii | 0.93 | 2.56 | 3.276 (10) | 134 |
C4—H4···O1iii | 0.93 | 2.59 | 3.366 (8) | 142 |
Symmetry codes: (ii) −x+1, y, −z−1/2; (iii) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | [Hg(NCS)2(C11H6N2O)] |
Mr | 498.95 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 298 |
a, b, c (Å) | 10.570 (2), 16.112 (3), 8.3390 (17) |
β (°) | 94.35 (3) |
V (Å3) | 1416.1 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 11.17 |
Crystal size (mm) | 0.45 × 0.30 × 0.25 |
Data collection | |
Diffractometer | Stoe IPDS2T diffractometer |
Absorption correction | Numerical (X-SHAPE and X-RED32; Stoe & Cie, 2005) |
Tmin, Tmax | 0.023, 0.059 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4787, 1903, 1737 |
Rint | 0.098 |
(sin θ/λ)max (Å−1) | 0.685 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.048, 0.118, 1.09 |
No. of reflections | 1903 |
No. of parameters | 97 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 4.61, −1.82 |
Computer programs: X-AREA (Stoe & Cie, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2···N2i | 0.93 | 2.56 | 3.276 (10) | 134 |
C4—H4···O1ii | 0.93 | 2.59 | 3.366 (8) | 142 |
Symmetry codes: (i) −x+1, y, −z−1/2; (ii) −x+1, −y+1, −z. |
Acknowledgements
We thank the Graduate Study Councils of Shahid Beheshti University for financial support.
References
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Henderson et al. (1984) first reported the synthesis of diazafluoren-9-one (dafone) and Ravikumar & Lakshmi (1994) determined the structure of this compound. Dafone is a bidentate ligand and numerous complexes with dafone have been prepared, such as that of cobalt (Shi et al., 1995), copper (Kulkarni et al., 2002; Menon & Rajasekharan, 1998), zinc (Zhang et al., 2004), manganese (Wu & Xu, 2004) and silver (Biju & Rajasekharan, 2008). For further investigation of the dafone complexes, we synthesized the title compound.
The asymmetric unit of the title compound (Fig. 1) contains a half molecule. The HgII atom, lying on a twofold rotation axis, is four-coordinated in a distorted tetrahedral geometry by an N,N'-bidentate dafone ligand and two thiocyanate anions. The Hg—N and Hg—S bond lengths (Table 1) and angles are within normal range as observed in [Hg(SCN)2(dm4bt)] (dm4bt = 2,2'-dimethyl-4,4'-bi-1,3-thiazole) (Safari et al., 2009). In the crystal, intermolecular C—H···O and C—H···N hydrogen bonds stabilize the structure (Table 2, Fig. 2).