organic compounds
2,3-Dibromo-3-phenyl-1-(3-phenylsydnon-4-yl)propan-1-one
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bDepartment of Studies in Chemistry, Mangalore University, Mangalagangotri, Mangalore 574 199, India
*Correspondence e-mail: hkfun@usm.my
In the title compound [systematic name: 4-(2,3-dibromo-3-phenylpropanoyl)-3-phenyl-1,2,3-oxadiazol-3-ylium-5-olate], C17H12Br2N2O3, the oxadiazole ring is essentially planar, with a maximum deviation of 0.001 (3) Å. The central oxadiazole ring makes dihedral angles of 73.3 (2) and 29.0 (2)° with the adjacent and remote phenyl rings, respectively. In the crystal, adjacent molecules are connected by C—H⋯O hydrogen bonds, forming a supramolecular chain along the c axis. There is an intramolecular C—H⋯O hydrogen bond, which generates an S(6) ring motif.
Related literature
For applications of et al. (2008); Jyothi et al. (2008). For details of see: Rai et al. (2007).
see: RaiExperimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811008026/is2684sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811008026/is2684Isup2.hkl
1-(31-Phenylsydnon-41-yl)-3-(phenyl)-propen-1-one (0.01 mol) was dissolved in glacial acetic acid (2–30 ml) by gentle warming. A solution of bromine in glacial acetic acid (30% w/v) was added to it with constant stirring till the yellow color of the bromine persisted. The reaction mixture was stirred at room temperature for 1-2 hours. The solid which separated was filtered, washed with methanol and dried. It was then recrystallized from ethanol. Crystals suitable for X-ray analysis were obtained from 1:2 mixtures of DMF and ethanol by slow evaporation.
All H atoms were positioned geometrically (C—H = 0.93 Å) and were refined using a riding model, with Uiso(H) = 1.2Ueq(C).
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C17H12Br2N2O3 | F(000) = 888 |
Mr = 452.11 | Dx = 1.694 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 3028 reflections |
a = 11.9109 (3) Å | θ = 2.3–19.9° |
b = 17.5018 (3) Å | µ = 4.59 mm−1 |
c = 8.5365 (2) Å | T = 296 K |
β = 94.960 (1)° | Plate, colourless |
V = 1772.87 (7) Å3 | 0.30 × 0.20 × 0.04 mm |
Z = 4 |
Bruker SMART APEXII CCD area-detector diffractometer | 4082 independent reflections |
Radiation source: fine-focus sealed tube | 1912 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.068 |
ϕ and ω scans | θmax = 27.6°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −15→15 |
Tmin = 0.341, Tmax = 0.849 | k = −22→22 |
23853 measured reflections | l = −11→11 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.104 | H-atom parameters constrained |
S = 0.98 | w = 1/[σ2(Fo2) + (0.0352P)2 + 0.6409P] where P = (Fo2 + 2Fc2)/3 |
4082 reflections | (Δ/σ)max = 0.001 |
217 parameters | Δρmax = 0.48 e Å−3 |
0 restraints | Δρmin = −0.44 e Å−3 |
C17H12Br2N2O3 | V = 1772.87 (7) Å3 |
Mr = 452.11 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 11.9109 (3) Å | µ = 4.59 mm−1 |
b = 17.5018 (3) Å | T = 296 K |
c = 8.5365 (2) Å | 0.30 × 0.20 × 0.04 mm |
β = 94.960 (1)° |
Bruker SMART APEXII CCD area-detector diffractometer | 4082 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 1912 reflections with I > 2σ(I) |
Tmin = 0.341, Tmax = 0.849 | Rint = 0.068 |
23853 measured reflections |
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.104 | H-atom parameters constrained |
S = 0.98 | Δρmax = 0.48 e Å−3 |
4082 reflections | Δρmin = −0.44 e Å−3 |
217 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | 0.16038 (4) | 1.00790 (2) | 0.96635 (6) | 0.0826 (2) | |
Br2 | 0.24594 (5) | 0.75050 (3) | 0.96598 (7) | 0.1118 (3) | |
O1 | 0.0435 (3) | 0.92146 (17) | 0.4180 (4) | 0.0871 (9) | |
O2 | 0.2052 (3) | 0.94860 (17) | 0.5666 (4) | 0.0889 (10) | |
O3 | 0.0007 (3) | 0.8462 (2) | 0.9185 (4) | 0.0943 (10) | |
N1 | −0.0551 (3) | 0.87006 (17) | 0.5834 (5) | 0.0648 (9) | |
N2 | −0.0581 (4) | 0.8894 (2) | 0.4355 (5) | 0.0855 (11) | |
C1 | −0.1583 (4) | 0.7596 (2) | 0.6667 (6) | 0.0827 (14) | |
H1A | −0.0949 | 0.7295 | 0.6565 | 0.099* | |
C2 | −0.2551 (4) | 0.7276 (3) | 0.7140 (6) | 0.0939 (16) | |
H2A | −0.2574 | 0.6757 | 0.7365 | 0.113* | |
C3 | −0.3477 (5) | 0.7719 (3) | 0.7279 (6) | 0.0957 (16) | |
H3A | −0.4133 | 0.7502 | 0.7596 | 0.115* | |
C4 | −0.3441 (5) | 0.8483 (3) | 0.6951 (7) | 0.1000 (16) | |
H4A | −0.4076 | 0.8783 | 0.7048 | 0.120* | |
C5 | −0.2478 (4) | 0.8815 (3) | 0.6481 (6) | 0.0827 (14) | |
H5A | −0.2452 | 0.9334 | 0.6258 | 0.099* | |
C6 | −0.1562 (4) | 0.8357 (2) | 0.6350 (5) | 0.0639 (11) | |
C7 | 0.1121 (5) | 0.9216 (2) | 0.5614 (6) | 0.0722 (12) | |
C8 | 0.0427 (4) | 0.8868 (2) | 0.6687 (5) | 0.0615 (11) | |
C9 | 0.0669 (4) | 0.8733 (2) | 0.8348 (6) | 0.0695 (12) | |
C10 | 0.1842 (4) | 0.8990 (2) | 0.9026 (6) | 0.0768 (13) | |
H10A | 0.2368 | 0.8972 | 0.8205 | 0.092* | |
C11 | 0.2311 (4) | 0.8574 (3) | 1.0407 (6) | 0.0820 (13) | |
H11A | 0.1767 | 0.8585 | 1.1205 | 0.098* | |
C12 | 0.3433 (4) | 0.8850 (2) | 1.1137 (6) | 0.0664 (11) | |
C13 | 0.3544 (4) | 0.9064 (2) | 1.2683 (6) | 0.0800 (13) | |
H13A | 0.2924 | 0.9042 | 1.3273 | 0.096* | |
C14 | 0.4564 (6) | 0.9312 (3) | 1.3369 (7) | 0.0982 (17) | |
H14A | 0.4638 | 0.9446 | 1.4427 | 0.118* | |
C15 | 0.5474 (5) | 0.9361 (3) | 1.2496 (9) | 0.0971 (17) | |
H15A | 0.6165 | 0.9531 | 1.2958 | 0.116* | |
C16 | 0.5364 (4) | 0.9164 (3) | 1.0977 (8) | 0.0981 (17) | |
H16A | 0.5981 | 0.9207 | 1.0385 | 0.118* | |
C17 | 0.4361 (4) | 0.8899 (3) | 1.0275 (6) | 0.0888 (14) | |
H17A | 0.4304 | 0.8754 | 0.9223 | 0.107* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.0582 (3) | 0.0681 (3) | 0.1219 (5) | −0.0028 (2) | 0.0096 (3) | −0.0066 (3) |
Br2 | 0.1595 (6) | 0.0592 (3) | 0.1144 (5) | −0.0146 (3) | −0.0012 (4) | −0.0116 (3) |
O1 | 0.106 (3) | 0.087 (2) | 0.071 (2) | −0.0081 (19) | 0.022 (2) | 0.0099 (17) |
O2 | 0.092 (2) | 0.086 (2) | 0.095 (3) | −0.0176 (18) | 0.042 (2) | 0.0054 (18) |
O3 | 0.085 (2) | 0.131 (3) | 0.068 (2) | −0.051 (2) | 0.0126 (19) | 0.005 (2) |
N1 | 0.075 (3) | 0.057 (2) | 0.063 (3) | −0.0025 (18) | 0.008 (2) | −0.0008 (18) |
N2 | 0.096 (3) | 0.091 (3) | 0.069 (3) | −0.004 (2) | 0.005 (3) | 0.007 (2) |
C1 | 0.076 (3) | 0.061 (3) | 0.109 (4) | −0.003 (2) | −0.005 (3) | 0.001 (3) |
C2 | 0.080 (4) | 0.069 (3) | 0.129 (5) | −0.020 (3) | −0.011 (3) | 0.010 (3) |
C3 | 0.080 (4) | 0.098 (4) | 0.108 (4) | −0.023 (3) | 0.003 (3) | 0.007 (3) |
C4 | 0.086 (4) | 0.091 (4) | 0.125 (5) | 0.015 (3) | 0.024 (3) | 0.004 (3) |
C5 | 0.083 (3) | 0.065 (3) | 0.101 (4) | 0.001 (3) | 0.013 (3) | 0.006 (3) |
C6 | 0.065 (3) | 0.061 (3) | 0.065 (3) | −0.006 (2) | 0.000 (2) | 0.000 (2) |
C7 | 0.088 (4) | 0.055 (3) | 0.076 (4) | 0.002 (2) | 0.021 (3) | −0.002 (2) |
C8 | 0.067 (3) | 0.064 (2) | 0.055 (3) | −0.009 (2) | 0.014 (3) | 0.000 (2) |
C9 | 0.063 (3) | 0.074 (3) | 0.072 (4) | −0.022 (2) | 0.012 (3) | −0.008 (2) |
C10 | 0.066 (3) | 0.087 (3) | 0.079 (3) | −0.014 (2) | 0.017 (3) | 0.004 (3) |
C11 | 0.082 (3) | 0.083 (3) | 0.083 (4) | −0.019 (3) | 0.015 (3) | 0.000 (3) |
C12 | 0.067 (3) | 0.068 (3) | 0.064 (3) | −0.005 (2) | 0.009 (3) | 0.000 (2) |
C13 | 0.094 (4) | 0.067 (3) | 0.080 (4) | −0.010 (2) | 0.017 (3) | −0.011 (2) |
C14 | 0.127 (5) | 0.081 (3) | 0.084 (4) | −0.012 (3) | −0.006 (4) | −0.012 (3) |
C15 | 0.077 (4) | 0.078 (3) | 0.130 (6) | −0.007 (3) | −0.025 (4) | 0.003 (3) |
C16 | 0.061 (3) | 0.116 (4) | 0.116 (5) | 0.003 (3) | 0.001 (4) | 0.017 (4) |
C17 | 0.070 (3) | 0.115 (4) | 0.082 (4) | 0.009 (3) | 0.014 (3) | 0.006 (3) |
Br1—C10 | 2.008 (4) | C5—H5A | 0.9300 |
Br2—C11 | 1.990 (5) | C7—C8 | 1.422 (6) |
O1—N2 | 1.354 (5) | C8—C9 | 1.442 (6) |
O1—C7 | 1.411 (5) | C9—C10 | 1.533 (6) |
O2—C7 | 1.203 (5) | C10—C11 | 1.455 (6) |
O3—C9 | 1.206 (5) | C10—H10A | 0.9800 |
N1—N2 | 1.304 (5) | C11—C12 | 1.505 (6) |
N1—C8 | 1.351 (5) | C11—H11A | 0.9800 |
N1—C6 | 1.448 (5) | C12—C13 | 1.367 (6) |
C1—C6 | 1.361 (5) | C12—C17 | 1.382 (6) |
C1—C2 | 1.374 (6) | C13—C14 | 1.372 (7) |
C1—H1A | 0.9300 | C13—H13A | 0.9300 |
C2—C3 | 1.361 (6) | C14—C15 | 1.370 (7) |
C2—H2A | 0.9300 | C14—H14A | 0.9300 |
C3—C4 | 1.369 (6) | C15—C16 | 1.338 (7) |
C3—H3A | 0.9300 | C15—H15A | 0.9300 |
C4—C5 | 1.376 (6) | C16—C17 | 1.370 (7) |
C4—H4A | 0.9300 | C16—H16A | 0.9300 |
C5—C6 | 1.365 (5) | C17—H17A | 0.9300 |
N2—O1—C7 | 111.2 (4) | C8—C9—C10 | 114.9 (4) |
N2—N1—C8 | 114.6 (4) | C11—C10—C9 | 115.6 (4) |
N2—N1—C6 | 116.6 (4) | C11—C10—Br1 | 108.0 (3) |
C8—N1—C6 | 128.8 (4) | C9—C10—Br1 | 103.6 (3) |
N1—N2—O1 | 105.3 (4) | C11—C10—H10A | 109.8 |
C6—C1—C2 | 119.2 (4) | C9—C10—H10A | 109.8 |
C6—C1—H1A | 120.4 | Br1—C10—H10A | 109.8 |
C2—C1—H1A | 120.4 | C10—C11—C12 | 116.1 (4) |
C3—C2—C1 | 120.1 (5) | C10—C11—Br2 | 104.4 (3) |
C3—C2—H2A | 119.9 | C12—C11—Br2 | 109.5 (3) |
C1—C2—H2A | 119.9 | C10—C11—H11A | 108.8 |
C2—C3—C4 | 119.9 (5) | C12—C11—H11A | 108.8 |
C2—C3—H3A | 120.1 | Br2—C11—H11A | 108.8 |
C4—C3—H3A | 120.1 | C13—C12—C17 | 118.8 (4) |
C3—C4—C5 | 120.9 (5) | C13—C12—C11 | 119.8 (4) |
C3—C4—H4A | 119.5 | C17—C12—C11 | 121.4 (4) |
C5—C4—H4A | 119.5 | C12—C13—C14 | 120.4 (5) |
C6—C5—C4 | 118.0 (4) | C12—C13—H13A | 119.8 |
C6—C5—H5A | 121.0 | C14—C13—H13A | 119.8 |
C4—C5—H5A | 121.0 | C15—C14—C13 | 120.0 (5) |
C1—C6—C5 | 122.0 (4) | C15—C14—H14A | 120.0 |
C1—C6—N1 | 119.8 (4) | C13—C14—H14A | 120.0 |
C5—C6—N1 | 118.2 (4) | C16—C15—C14 | 119.7 (5) |
O2—C7—O1 | 119.7 (5) | C16—C15—H15A | 120.2 |
O2—C7—C8 | 136.8 (5) | C14—C15—H15A | 120.2 |
O1—C7—C8 | 103.5 (4) | C15—C16—C17 | 121.3 (5) |
N1—C8—C7 | 105.5 (4) | C15—C16—H16A | 119.3 |
N1—C8—C9 | 125.7 (4) | C17—C16—H16A | 119.3 |
C7—C8—C9 | 128.7 (4) | C16—C17—C12 | 119.7 (5) |
O3—C9—C8 | 124.2 (4) | C16—C17—H17A | 120.2 |
O3—C9—C10 | 120.9 (4) | C12—C17—H17A | 120.2 |
C8—N1—N2—O1 | −0.1 (5) | N1—C8—C9—O3 | −1.4 (7) |
C6—N1—N2—O1 | 178.4 (3) | C7—C8—C9—O3 | 176.6 (4) |
C7—O1—N2—N1 | 0.1 (4) | N1—C8—C9—C10 | −179.0 (4) |
C6—C1—C2—C3 | 0.3 (8) | C7—C8—C9—C10 | −1.1 (6) |
C1—C2—C3—C4 | −0.2 (8) | O3—C9—C10—C11 | 29.5 (6) |
C2—C3—C4—C5 | 0.0 (8) | C8—C9—C10—C11 | −152.7 (4) |
C3—C4—C5—C6 | 0.0 (8) | O3—C9—C10—Br1 | −88.4 (4) |
C2—C1—C6—C5 | −0.3 (7) | C8—C9—C10—Br1 | 89.4 (4) |
C2—C1—C6—N1 | −179.3 (4) | C9—C10—C11—C12 | −176.7 (4) |
C4—C5—C6—C1 | 0.1 (7) | Br1—C10—C11—C12 | −61.3 (5) |
C4—C5—C6—N1 | 179.1 (4) | C9—C10—C11—Br2 | 62.6 (4) |
N2—N1—C6—C1 | 106.8 (5) | Br1—C10—C11—Br2 | 178.07 (17) |
C8—N1—C6—C1 | −74.9 (6) | C10—C11—C12—C13 | 123.0 (5) |
N2—N1—C6—C5 | −72.2 (5) | Br2—C11—C12—C13 | −119.1 (4) |
C8—N1—C6—C5 | 106.1 (5) | C10—C11—C12—C17 | −56.4 (6) |
N2—O1—C7—O2 | −179.6 (4) | Br2—C11—C12—C17 | 61.6 (5) |
N2—O1—C7—C8 | −0.1 (4) | C17—C12—C13—C14 | −1.1 (7) |
N2—N1—C8—C7 | 0.0 (5) | C11—C12—C13—C14 | 179.6 (4) |
C6—N1—C8—C7 | −178.3 (3) | C12—C13—C14—C15 | 1.4 (7) |
N2—N1—C8—C9 | 178.3 (4) | C13—C14—C15—C16 | −0.3 (8) |
C6—N1—C8—C9 | 0.1 (6) | C14—C15—C16—C17 | −1.1 (8) |
O2—C7—C8—N1 | 179.3 (5) | C15—C16—C17—C12 | 1.4 (8) |
O1—C7—C8—N1 | 0.1 (4) | C13—C12—C17—C16 | −0.3 (7) |
O2—C7—C8—C9 | 1.0 (8) | C11—C12—C17—C16 | 179.0 (4) |
O1—C7—C8—C9 | −178.2 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
C10—H10A···O2 | 0.98 | 2.35 | 3.028 (6) | 126 |
C13—H13A···O2i | 0.93 | 2.49 | 3.312 (6) | 147 |
Symmetry code: (i) x, y, z+1. |
Experimental details
Crystal data | |
Chemical formula | C17H12Br2N2O3 |
Mr | 452.11 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 296 |
a, b, c (Å) | 11.9109 (3), 17.5018 (3), 8.5365 (2) |
β (°) | 94.960 (1) |
V (Å3) | 1772.87 (7) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 4.59 |
Crystal size (mm) | 0.30 × 0.20 × 0.04 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.341, 0.849 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 23853, 4082, 1912 |
Rint | 0.068 |
(sin θ/λ)max (Å−1) | 0.652 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.104, 0.98 |
No. of reflections | 4082 |
No. of parameters | 217 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.48, −0.44 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C10—H10A···O2 | 0.9800 | 2.3500 | 3.028 (6) | 126.00 |
C13—H13A···O2i | 0.9300 | 2.4900 | 3.312 (6) | 147.00 |
Symmetry code: (i) x, y, z+1. |
Footnotes
‡Thomson Reuters ResearcherID: A-3561-2009.
Acknowledgements
HKF and MH thank the Malaysian Government and Universiti Sains Malaysia for the Research University grant No. 1001/PFIZIK/811160. MH thanks Universiti Sains Malaysia for a post-doctoral research fellowship.
References
Bruker (2005). SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
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Jyothi, C. H., Girisha, K. S., Adithya, A. & Kalluraya, B. (2008). Eur. J. Med. Chem. 43, 2831–2834. Web of Science PubMed Google Scholar
Rai, N. S., Kalluraya, B. & Lingappa, B. (2007). Synth. Commun. 37, 2267–2273. Web of Science CrossRef CAS Google Scholar
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Sydnones constitute a well-defined class of mesoionic compounds that contain the 1,2,3-oxadiazole ring system. The study of sydnones still remains a field of interest because of their electronic structure and also because of the varied types of biological activities (Rai et al., 2008). Recently, sydnone derivatives were found to exhibit promising anti-microbial properties (Jyothi et al., 2008). Chalcones were obtained by the base-catalyzed condensation of 4-acetyl-3-aryl sydnones with aromatic aldehydes in alcoholic medium employing sodium hydroxide as catalyst at 0–5 °C. Bromination of chalcones with bromine in glacial acetic acid afforded dibromo chalcones (Rai et al., 2007).
The molecular structure of the title compound is shown in Fig. 1. The oxadiazole (N1/N2/O1/C7/C8) ring is essentially planar, with a maximum deviation of 0.001 (3) Å for atom O1. The central oxadiazole (N1/N2/O1/C7/C8) ring makes dihedral angles of 73.3 (2)° and 29.0 (2)° with the attached phenyl (C1–C6) and the terminal phenyl (C12–C17) rings, respectively.
In the crystal, (Fig. 2), the adjacent molecules are connected by intra and intermolecular C10—H10A···O2 and C13—H13A···O2 (Table 1) hydrogen bonds forming supramolecular chains along the c-axis. There is an intramolecular C—H···O hydrogen bond, which generates an S(6) ring motif.