metal-organic compounds
Tetraaquabis[2-(2-oxo-2,3-dihydro-1,3-benzoxazol-3-yl)acetato]zinc
aInstitute of Bioorganic Chemistry, Academy of Sciences of Uzbekistan, Mirzo Ulugbek Str. 83, Tashkent 100125, Uzbekistan, bThe National University of Uzbekistan named after Mirzo Ulugbek, Faculty of Chemistry, University Str. 6, Tashkent 100779, Uzbekistan, and cS. Yunusov Institute of the Chemistry of Plant Substances, Academy of Sciences of Uzbekistan, Mirzo Ulugbek Str. 77, Tashkent 100170, Uzbekistan
*Correspondence e-mail: gavhar1979.79@mail.ru
The ZnII ion in the title compound, [Zn(C9H6NO4)2(H2O)4], is located on an inversion center and is octahedrally coordinated by two 2-(2-oxo-2,3-dihydro-1,3-benzoxazol-3-yl)acetate anions in axial sites and four water molecules in equatorial positions. In the crystal, O—H⋯O hydrogen bonds between the coordinated water molecules and carbonyl–carboxylate O atoms lead to pleated sheets parallel to (001).
Related literature
For the synthesis of 3-alkanoic acid derivatives of 2(3H)-benzoxazolone, see: Lespagnol et al. (1967). For the biological activity of 2(3H)-benzoxazolone derivatives, see: Önkol et al. (2004). For the structure of a 2(3H)-benzoxazolone metal complex, see: Wagler & Hill (2008).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: XP (Bruker, 1998); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536811007999/mw2002sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811007999/mw2002Isup2.hkl
A solution of 2-benzoxazolinon-3-yl-acetate acid (19,3 mg, 0.1 mmol) in ethanol (2 ml) was added to a solution of ZnCl2.6H2O (6.8 mg 0.05 mmol) in water (1 ml) and stirred for 10 min at 40 °C. Slow evaporation of the resulting solution gave colourles crystals suitable for X-ray analysis.
H-atoms attached to carbon were placed in calculated positions (C—H = 0.95 - 0.98 Å) while those attached to oxygen were placed in locations derived from a difference map and their positions adjusted to provide reasonable geometries for the coordinated water molecules. All were included as riding contributions with isotropic displacement parameters 1.2 - 1.5 times those of the attached atoms.
Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell
CrysAlis PRO (Oxford Diffraction, 2009); data reduction: CrysAlis PRO (Oxford Diffraction, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: XP (Bruker, 1998); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).[Zn(C9H6NO4)2(H2O)4] | F(000) = 536 |
Mr = 521.73 | Dx = 1.732 Mg m−3 |
Monoclinic, P21/n | Cu Kα radiation, λ = 1.54180 Å |
Hall symbol: -P 2yn | Cell parameters from 4608 reflections |
a = 6.144 (3) Å | θ = 7.6–66.2° |
b = 5.342 (1) Å | µ = 2.38 mm−1 |
c = 30.595 (2) Å | T = 293 K |
β = 94.80 (5)° | Prism, colourless |
V = 1000.6 (6) Å3 | 0.50 × 0.35 × 0.20 mm |
Z = 2 |
Oxford Diffraction Xcalibur Ruby diffractometer | 1745 independent reflections |
Radiation source: Enhance (Cu) X-ray Source | 1168 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.065 |
Detector resolution: 10.2576 pixels mm-1 | θmax = 66.7°, θmin = 5.8° |
ω scans | h = −7→6 |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | k = −3→6 |
Tmin = 0.726, Tmax = 1.000 | l = −35→36 |
5344 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.053 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.150 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0732P)2 + 0.5645P] where P = (Fo2 + 2Fc2)/3 |
1745 reflections | (Δ/σ)max < 0.001 |
151 parameters | Δρmax = 0.80 e Å−3 |
0 restraints | Δρmin = −0.34 e Å−3 |
[Zn(C9H6NO4)2(H2O)4] | V = 1000.6 (6) Å3 |
Mr = 521.73 | Z = 2 |
Monoclinic, P21/n | Cu Kα radiation |
a = 6.144 (3) Å | µ = 2.38 mm−1 |
b = 5.342 (1) Å | T = 293 K |
c = 30.595 (2) Å | 0.50 × 0.35 × 0.20 mm |
β = 94.80 (5)° |
Oxford Diffraction Xcalibur Ruby diffractometer | 1745 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | 1168 reflections with I > 2σ(I) |
Tmin = 0.726, Tmax = 1.000 | Rint = 0.065 |
5344 measured reflections |
R[F2 > 2σ(F2)] = 0.053 | 0 restraints |
wR(F2) = 0.150 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.80 e Å−3 |
1745 reflections | Δρmin = −0.34 e Å−3 |
151 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. H-atoms attached to carbon were placed in calculated positions (C—H = 0.95 - 0.98 Å) while those attached to oxygen were placed in locations derived from a difference map and their positions adjusted to provide reasonable geometries for the coordinated water molecules. All were included as riding contributions with isotropic displacement parameters 1.2 - 1.5 times those of the attached atoms. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 1.0000 | 0.0000 | 0.0000 | 0.0416 (3) | |
O1 | 0.2330 (6) | 0.1894 (7) | 0.17363 (12) | 0.0481 (9) | |
O2 | 0.1804 (6) | 0.4884 (7) | 0.12215 (13) | 0.0578 (10) | |
O3 | 0.5737 (6) | −0.0487 (6) | 0.05893 (11) | 0.0432 (9) | |
O4 | 0.7938 (6) | 0.2347 (6) | 0.03233 (11) | 0.0446 (9) | |
N1 | 0.4944 (7) | 0.2399 (8) | 0.12870 (14) | 0.0427 (10) | |
C1 | 0.2944 (9) | 0.3231 (10) | 0.13871 (17) | 0.0448 (13) | |
C2 | 0.5608 (8) | 0.0474 (9) | 0.15703 (16) | 0.0386 (12) | |
C3 | 0.7425 (9) | −0.1051 (10) | 0.16032 (18) | 0.0469 (14) | |
H3A | 0.8541 | −0.0866 | 0.1418 | 0.056* | |
C4 | 0.7500 (10) | −0.2885 (11) | 0.19291 (19) | 0.0563 (15) | |
H4A | 0.8694 | −0.3959 | 0.1962 | 0.068* | |
C5 | 0.5830 (10) | −0.3139 (11) | 0.22046 (19) | 0.0599 (16) | |
H5A | 0.5939 | −0.4364 | 0.2421 | 0.072* | |
C6 | 0.4014 (10) | −0.1616 (11) | 0.21642 (18) | 0.0547 (15) | |
H6A | 0.2885 | −0.1791 | 0.2346 | 0.066* | |
C7 | 0.3957 (8) | 0.0144 (10) | 0.18462 (16) | 0.0438 (12) | |
C8 | 0.6179 (9) | 0.3428 (10) | 0.09484 (17) | 0.0479 (14) | |
H8A | 0.7561 | 0.4046 | 0.1083 | 0.057* | |
H8B | 0.5385 | 0.4845 | 0.0816 | 0.057* | |
C9 | 0.6627 (8) | 0.1603 (10) | 0.05923 (16) | 0.0397 (12) | |
O1W | 1.1399 (6) | −0.1149 (7) | 0.06222 (12) | 0.0539 (10) | |
H1A | 1.1269 | −0.2588 | 0.0711 | 0.065* | |
H1B | 1.2722 | −0.0835 | 0.0699 | 0.065* | |
O2W | 1.2325 (5) | 0.2871 (6) | 0.00289 (11) | 0.0469 (9) | |
H2A | 1.3514 | 0.2751 | −0.0076 | 0.056* | |
H2B | 1.2014 | 0.4359 | −0.0014 | 0.056* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.0426 (6) | 0.0316 (5) | 0.0524 (6) | 0.0037 (5) | 0.0147 (4) | 0.0050 (5) |
O1 | 0.046 (2) | 0.045 (2) | 0.056 (2) | 0.0049 (18) | 0.0188 (17) | 0.0053 (18) |
O2 | 0.059 (2) | 0.050 (2) | 0.067 (3) | 0.016 (2) | 0.0170 (19) | 0.014 (2) |
O3 | 0.045 (2) | 0.036 (2) | 0.050 (2) | −0.0054 (16) | 0.0131 (16) | 0.0012 (16) |
O4 | 0.052 (2) | 0.032 (2) | 0.053 (2) | 0.0059 (16) | 0.0225 (17) | 0.0060 (17) |
N1 | 0.049 (3) | 0.038 (3) | 0.043 (2) | 0.000 (2) | 0.0105 (19) | 0.001 (2) |
C1 | 0.043 (3) | 0.044 (3) | 0.048 (3) | 0.002 (3) | 0.009 (2) | −0.003 (3) |
C2 | 0.045 (3) | 0.032 (3) | 0.039 (3) | −0.002 (2) | 0.006 (2) | −0.002 (2) |
C3 | 0.042 (3) | 0.044 (3) | 0.055 (4) | 0.001 (2) | 0.003 (2) | −0.004 (3) |
C4 | 0.058 (4) | 0.047 (4) | 0.062 (4) | 0.006 (3) | −0.010 (3) | −0.006 (3) |
C5 | 0.080 (5) | 0.044 (4) | 0.054 (4) | 0.001 (3) | −0.006 (3) | 0.006 (3) |
C6 | 0.065 (4) | 0.050 (4) | 0.050 (4) | −0.009 (3) | 0.009 (3) | 0.010 (3) |
C7 | 0.051 (3) | 0.040 (3) | 0.041 (3) | 0.004 (3) | 0.009 (2) | −0.004 (3) |
C8 | 0.050 (3) | 0.041 (3) | 0.054 (3) | −0.006 (3) | 0.016 (3) | 0.006 (3) |
C9 | 0.040 (3) | 0.043 (3) | 0.037 (3) | 0.009 (2) | 0.006 (2) | 0.007 (2) |
O1W | 0.041 (2) | 0.055 (2) | 0.066 (3) | 0.0016 (18) | 0.0051 (18) | 0.016 (2) |
O2W | 0.048 (2) | 0.0305 (19) | 0.064 (2) | 0.0012 (16) | 0.0170 (17) | 0.0037 (17) |
Zn1—O4i | 2.089 (3) | C3—C4 | 1.396 (8) |
Zn1—O4 | 2.089 (3) | C3—H3A | 0.9300 |
Zn1—O2W | 2.093 (3) | C4—C5 | 1.388 (8) |
Zn1—O2Wi | 2.093 (3) | C4—H4A | 0.9300 |
Zn1—O1W | 2.113 (4) | C5—C6 | 1.378 (8) |
Zn1—O1Wi | 2.113 (4) | C5—H5A | 0.9300 |
O1—C1 | 1.364 (6) | C6—C7 | 1.351 (8) |
O1—C7 | 1.389 (6) | C6—H6A | 0.9300 |
O2—C1 | 1.212 (6) | C8—C9 | 1.504 (7) |
O3—C9 | 1.243 (6) | C8—H8A | 0.9700 |
O4—C9 | 1.263 (6) | C8—H8B | 0.9700 |
N1—C1 | 1.365 (6) | O1W—H1A | 0.8218 |
N1—C2 | 1.384 (6) | O1W—H1B | 0.8439 |
N1—C8 | 1.443 (6) | O2W—H2A | 0.8249 |
C2—C3 | 1.379 (7) | O2W—H2B | 0.8256 |
C2—C7 | 1.384 (7) | ||
O4i—Zn1—O4 | 180.00 (15) | C4—C3—H3A | 121.8 |
O4i—Zn1—O2W | 91.20 (13) | C5—C4—C3 | 121.4 (6) |
O4—Zn1—O2W | 88.81 (13) | C5—C4—H4A | 119.3 |
O4i—Zn1—O2Wi | 88.80 (13) | C3—C4—H4A | 119.3 |
O4—Zn1—O2Wi | 91.20 (13) | C6—C5—C4 | 121.5 (6) |
O2W—Zn1—O2Wi | 180.0 | C6—C5—H5A | 119.3 |
O4i—Zn1—O1W | 92.02 (14) | C4—C5—H5A | 119.3 |
O4—Zn1—O1W | 87.98 (14) | C7—C6—C5 | 116.6 (6) |
O2W—Zn1—O1W | 87.14 (14) | C7—C6—H6A | 121.7 |
O2Wi—Zn1—O1W | 92.86 (14) | C5—C6—H6A | 121.7 |
O4i—Zn1—O1Wi | 87.98 (14) | C6—C7—C2 | 123.5 (5) |
O4—Zn1—O1Wi | 92.02 (14) | C6—C7—O1 | 128.1 (5) |
O2W—Zn1—O1Wi | 92.86 (14) | C2—C7—O1 | 108.4 (4) |
O2Wi—Zn1—O1Wi | 87.14 (14) | N1—C8—C9 | 114.4 (4) |
O1W—Zn1—O1Wi | 180.0 | N1—C8—H8A | 108.7 |
C1—O1—C7 | 107.6 (4) | C9—C8—H8A | 108.7 |
C9—O4—Zn1 | 124.4 (3) | N1—C8—H8B | 108.7 |
C1—N1—C2 | 109.0 (4) | C9—C8—H8B | 108.7 |
C1—N1—C8 | 125.0 (4) | H8A—C8—H8B | 107.6 |
C2—N1—C8 | 126.0 (4) | O3—C9—O4 | 125.6 (5) |
O2—C1—O1 | 121.4 (5) | O3—C9—C8 | 118.7 (4) |
O2—C1—N1 | 130.0 (5) | O4—C9—C8 | 115.7 (5) |
O1—C1—N1 | 108.5 (4) | Zn1—O1W—H1A | 121.8 |
C3—C2—N1 | 132.8 (5) | Zn1—O1W—H1B | 120.1 |
C3—C2—C7 | 120.7 (5) | H1A—O1W—H1B | 102.2 |
N1—C2—C7 | 106.5 (4) | Zn1—O2W—H2A | 123.4 |
C2—C3—C4 | 116.4 (5) | Zn1—O2W—H2B | 123.4 |
C2—C3—H3A | 121.8 | H2A—O2W—H2B | 102.3 |
Symmetry code: (i) −x+2, −y, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O2W—H2B···O4ii | 0.83 | 2.00 | 2.772 (5) | 156 |
O1W—H1B···O3iii | 0.84 | 1.92 | 2.699 (5) | 153 |
O1W—H1A···O2iv | 0.82 | 2.07 | 2.799 (5) | 148 |
Symmetry codes: (ii) −x+2, −y+1, −z; (iii) x+1, y, z; (iv) x+1, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C9H6NO4)2(H2O)4] |
Mr | 521.73 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 6.144 (3), 5.342 (1), 30.595 (2) |
β (°) | 94.80 (5) |
V (Å3) | 1000.6 (6) |
Z | 2 |
Radiation type | Cu Kα |
µ (mm−1) | 2.38 |
Crystal size (mm) | 0.50 × 0.35 × 0.20 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur Ruby diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) |
Tmin, Tmax | 0.726, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5344, 1745, 1168 |
Rint | 0.065 |
(sin θ/λ)max (Å−1) | 0.596 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.053, 0.150, 1.06 |
No. of reflections | 1745 |
No. of parameters | 151 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.80, −0.34 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), XP (Bruker, 1998).
D—H···A | D—H | H···A | D···A | D—H···A |
O2W—H2B···O4i | 0.83 | 2.00 | 2.772 (5) | 156 |
O1W—H1B···O3ii | 0.84 | 1.92 | 2.699 (5) | 153 |
O1W—H1A···O2iii | 0.82 | 2.07 | 2.799 (5) | 148 |
Symmetry codes: (i) −x+2, −y+1, −z; (ii) x+1, y, z; (iii) x+1, y−1, z. |
Acknowledgements
This work was supported by a Grant for Fundamental Research from the Center of Science and Technology, Uzbekistan (grant No. FA-F3-T-141).
References
Bruker (1998). XP. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Lespagnol, A., Lespagnol, Ch., Lesieur, D., Marcincal-Lebebvre, A. & Dupont, C. (1967). Chim. Ther. 2, 343–346. CAS Google Scholar
Önkol, T., Sahin, M. F., Yildirim, E., Erol, K. & Ito, S. (2004). Arch. Pharm. Res. 27, 1086–1092. Web of Science PubMed Google Scholar
Oxford Diffraction (2009). CrysAlis PRO. Oxford Diffraction Ltd, Yarnton, Oxfordshire, England. Google Scholar
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2-Benzoxazolinone derivatives have attracted interest because of their biological activities (Önkol et al., 2004).
The Zn (II) ion lies on an inversion center in an octahedral coordination environment with four O atoms from four coordinated water molecules in the equatorial positions and two O atoms from two ligands in the axial sites.(Fig.1). The coordinated water molecules form strong intermolecular hydrogen bonds with carbonyl and carboxyl O atoms of the ligand (Table 1). Centrosymmetric pairs of O2W–H2B···O4 hydrogen bonds propagating along [010] form pleated strands (Fig.2). Similar strands propagating along [100] (Fig.3) and [110] are formed by O1W–H1B···O3 and O1W–H1A···O2 hydrogen bonds, respectively. Together, these interactions generate sheets parallel to (001).