metal-organic compounds
A second polymorph of catena-poly[[(1,10-phenanthroline-κ2N,N′)copper(II)]-di-μ-thiocyanato-κ2N:S;κ2S:N]
aDepartment of Applied Chemistry, Zhejiang Sci-Tech University, Hang Zhou 310018, People's Republic of China, and Engineering Research Center for Eco-Dyeing & Finishing of Textiles, Ministry of Education, Zhejiang Sci-Tech University, Hangzhou 310018, People's Republic of China
*Correspondence e-mail: zhangshishen@126.com
In the title coordination polymer, [Cu(NCS)2(C12H8N2)]n, the CuII atom is situated on a twofold rotation axis and is coordinated by two N atoms from the bidentate 1,10-phenanthroline ligand and four thiocyanate groups to confer a CuN4S2 octahedral geometry and resulting in a layer structure extending parallel to (100).
Related literature
For the first polymorph of this composition, see: Breneman & Parker (1993). For related structures, see: Kulkarni et al. (2002); Morpurgo et al. (1984).
Experimental
Crystal data
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Data collection: SMART (Bruker, 1998); cell SAINT (Bruker, 1998); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536811001759/ng5084sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811001759/ng5084Isup2.hkl
The mixture of CuSCN (0.0244 g, 0.2 mmol), 1, 10-Phenanthroline (0.0132 g, 0.1 mmol), were placed and sealed in a 10 ml Teflon-lined stainless steel reactor and heated to 160 °C for 72 h, then cooled down to room temperature at a rate of 5 °C/ 60 min. Single crystals suitable for X-ray diffraction were obtained in the form of black bars in ca 35% yield.
The web of checkcif show one Alert level B(Hirshfeld Test Diff S1 – C7..8.52 su), we think this is the result of the sightly distorted S atom of the thiocyanate group for his weak interaction to the Cu atom.
H atoms were positioned geometrically and refined using a riding model, with C—H = 0.93?Å(aromatic) and Uĩso(H) = 1.2Ueq(C)
Data collection: SMART (Bruker, 1998); cell
SAINT (Bruker, 1998); data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The coordination environment of the title compound | |
Fig. 2. The crystal packing of the title compound |
[Cu(NCS)2(C12H8N2)] | F(000) = 724 |
Mr = 359.90 | Dx = 1.724 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -c 2yc | Cell parameters from 1647 reflections |
a = 14.0353 (13) Å | θ = 2.5–27.8° |
b = 10.3081 (9) Å | µ = 1.87 mm−1 |
c = 10.2670 (9) Å | T = 294 K |
β = 111.034 (2)° | Block, black |
V = 1386.4 (2) Å3 | 0.25 × 0.22 × 0.15 mm |
Z = 4 |
Bruker SMART diffractometer | 1362 independent reflections |
Radiation source: fine-focus sealed tube | 1254 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.015 |
ϕ and ω scans | θmax = 26.0°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −17→17 |
Tmin = 0.633, Tmax = 0.755 | k = −12→5 |
3938 measured reflections | l = −12→12 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.027 | H-atom parameters constrained |
wR(F2) = 0.076 | w = 1/[σ2(Fo2) + (0.0475P)2 + 0.5818P] where P = (Fo2 + 2Fc2)/3 |
S = 1.08 | (Δ/σ)max = 0.001 |
1362 reflections | Δρmax = 0.33 e Å−3 |
97 parameters | Δρmin = −0.31 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0008 (3) |
[Cu(NCS)2(C12H8N2)] | V = 1386.4 (2) Å3 |
Mr = 359.90 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 14.0353 (13) Å | µ = 1.87 mm−1 |
b = 10.3081 (9) Å | T = 294 K |
c = 10.2670 (9) Å | 0.25 × 0.22 × 0.15 mm |
β = 111.034 (2)° |
Bruker SMART diffractometer | 1362 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1254 reflections with I > 2σ(I) |
Tmin = 0.633, Tmax = 0.755 | Rint = 0.015 |
3938 measured reflections |
R[F2 > 2σ(F2)] = 0.027 | 0 restraints |
wR(F2) = 0.076 | H-atom parameters constrained |
S = 1.08 | Δρmax = 0.33 e Å−3 |
1362 reflections | Δρmin = −0.31 e Å−3 |
97 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cu1 | 0.5000 | 0.62211 (3) | 0.2500 | 0.03359 (15) | |
N2 | 0.43016 (13) | 0.49319 (16) | 0.32227 (17) | 0.0407 (4) | |
N1 | 0.56960 (11) | 0.77181 (16) | 0.19112 (15) | 0.0330 (3) | |
C7 | 0.39033 (14) | 0.43783 (18) | 0.38718 (19) | 0.0324 (4) | |
C6 | 0.53802 (14) | 0.88917 (17) | 0.21873 (19) | 0.0326 (4) | |
C1 | 0.64028 (15) | 0.7684 (2) | 0.1322 (2) | 0.0426 (5) | |
H1 | 0.6632 | 0.6884 | 0.1136 | 0.051* | |
C4 | 0.57499 (16) | 1.0064 (2) | 0.1877 (2) | 0.0415 (5) | |
C3 | 0.64909 (17) | 0.9994 (2) | 0.1252 (2) | 0.0488 (6) | |
H3 | 0.6761 | 1.0749 | 0.1027 | 0.059* | |
C2 | 0.68083 (19) | 0.8814 (2) | 0.0979 (3) | 0.0507 (6) | |
H2 | 0.7296 | 0.8759 | 0.0562 | 0.061* | |
S1 | 0.33300 (4) | 0.36018 (5) | 0.47588 (6) | 0.04095 (18) | |
C5 | 0.5358 (2) | 1.12518 (19) | 0.2202 (3) | 0.0548 (6) | |
H5 | 0.5599 | 1.2038 | 0.1999 | 0.066* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.0418 (2) | 0.0268 (2) | 0.0433 (2) | 0.000 | 0.02887 (17) | 0.000 |
N2 | 0.0479 (10) | 0.0375 (9) | 0.0432 (9) | −0.0075 (8) | 0.0242 (8) | 0.0008 (7) |
N1 | 0.0348 (8) | 0.0338 (8) | 0.0351 (8) | −0.0009 (6) | 0.0182 (6) | 0.0016 (6) |
C7 | 0.0353 (9) | 0.0279 (9) | 0.0358 (9) | −0.0008 (8) | 0.0148 (8) | −0.0027 (7) |
C6 | 0.0359 (10) | 0.0312 (9) | 0.0302 (9) | −0.0021 (7) | 0.0111 (8) | 0.0015 (7) |
C1 | 0.0424 (10) | 0.0461 (12) | 0.0487 (11) | −0.0017 (9) | 0.0280 (9) | 0.0019 (9) |
C4 | 0.0451 (11) | 0.0366 (11) | 0.0391 (10) | −0.0057 (9) | 0.0107 (9) | 0.0052 (8) |
C3 | 0.0515 (12) | 0.0467 (13) | 0.0501 (12) | −0.0150 (10) | 0.0206 (10) | 0.0097 (10) |
C2 | 0.0481 (12) | 0.0637 (16) | 0.0498 (13) | −0.0116 (10) | 0.0293 (11) | 0.0039 (10) |
S1 | 0.0430 (3) | 0.0442 (3) | 0.0433 (3) | −0.0070 (2) | 0.0249 (2) | 0.0026 (2) |
C5 | 0.0705 (17) | 0.0301 (11) | 0.0589 (15) | −0.0062 (9) | 0.0174 (12) | 0.0025 (9) |
Cu1—N2 | 1.9492 (16) | C1—C2 | 1.397 (3) |
Cu1—N2i | 1.9492 (16) | C1—H1 | 0.9300 |
Cu1—N1 | 2.0310 (15) | C4—C3 | 1.406 (3) |
Cu1—N1i | 2.0310 (15) | C4—C5 | 1.430 (3) |
N2—C7 | 1.162 (3) | C3—C2 | 1.359 (3) |
N1—C1 | 1.335 (2) | C3—H3 | 0.9300 |
N1—C6 | 1.353 (2) | C2—H2 | 0.9300 |
C7—S1 | 1.6259 (19) | C5—C5i | 1.351 (6) |
C6—C4 | 1.397 (3) | C5—H5 | 0.9300 |
C6—C6i | 1.430 (4) | ||
N2—Cu1—N2i | 94.04 (10) | N1—C1—H1 | 119.0 |
N2—Cu1—N1 | 173.03 (6) | C2—C1—H1 | 119.0 |
N2i—Cu1—N1 | 92.49 (7) | C6—C4—C3 | 117.1 (2) |
N2—Cu1—N1i | 92.49 (7) | C6—C4—C5 | 118.8 (2) |
N2i—Cu1—N1i | 173.03 (6) | C3—C4—C5 | 124.1 (2) |
N1—Cu1—N1i | 81.10 (9) | C2—C3—C4 | 119.4 (2) |
C7—N2—Cu1 | 164.69 (16) | C2—C3—H3 | 120.3 |
C1—N1—C6 | 118.10 (17) | C4—C3—H3 | 120.3 |
C1—N1—Cu1 | 129.05 (15) | C3—C2—C1 | 120.1 (2) |
C6—N1—Cu1 | 112.85 (12) | C3—C2—H2 | 120.0 |
N2—C7—S1 | 179.12 (18) | C1—C2—H2 | 120.0 |
N1—C6—C4 | 123.34 (18) | C5i—C5—C4 | 121.13 (13) |
N1—C6—C6i | 116.59 (10) | C5i—C5—H5 | 119.4 |
C4—C6—C6i | 120.07 (12) | C4—C5—H5 | 119.4 |
N1—C1—C2 | 121.9 (2) |
Symmetry code: (i) −x+1, y, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Cu(NCS)2(C12H8N2)] |
Mr | 359.90 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 294 |
a, b, c (Å) | 14.0353 (13), 10.3081 (9), 10.2670 (9) |
β (°) | 111.034 (2) |
V (Å3) | 1386.4 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.87 |
Crystal size (mm) | 0.25 × 0.22 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.633, 0.755 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3938, 1362, 1254 |
Rint | 0.015 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.027, 0.076, 1.08 |
No. of reflections | 1362 |
No. of parameters | 97 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.33, −0.31 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1998), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Acknowledgements
This work was supported by the Qianjiang Talents Project of the Technology Office of Zhejiang Province (grant No. 2009R10029), the National Natural Science Foundation of China (grant No. 20803067) and the Zhejiang Provincial Top Academic Discipline of Applied Chemistry and Eco-Dyeing & Finishing Engineering (grant No. ZYG2010019).
References
Breneman, G. L. & Parker, O. J. (1993). Polyhedron, 12, 891–895. CSD CrossRef CAS Web of Science Google Scholar
Bruker (1998). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Kulkarni, P., Padhye, S., Sinn, E., Anson, C. E. & Powell, A. K. (2002). Inorg. Chim. Acta, 332, 167–175. CrossRef CAS Google Scholar
Morpurgo, G. O., Dessy, G. & Fares, V. (1984). J. Chem. Soc. Dalton Trans. pp. 785–791. CSD CrossRef Web of Science Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Phenanthroline and its derivatives have been achieving rapidly increasing attention not only for their potential application as functional materials, but aslo from their intriguing variety of architectures and topologies. 1, 10-Phenanthroline, as one kind of those ligand, has usually been used to construct a great variety of structurally interesting entities, such as monomers(Breneman et al. 1993), ploymers(Kulkarni et al. 2002; Morpurgo et al. 1984).
The structure of the title compound (I) is illustrated in Fig. 1. the CuII atom is coordinated by two N atoms from1, 10-Phenanthroline ligand, as well as by the two N atoms and two S atoms from four thiocyanate groups to confer a distorted octahedral coordination at the metal centre. Two S atoms occupy the axial position, showing weak interaction of Cu1—S1 bond [2.952 (3)], which give rise to one-dimensional chain along (100), the crystal packing is stabilized by the intermolecular π-π stacking interaction(Fig. 2).
In contrast to the first polymorph of this composition in which the distance of Cu—S bonds are longer [3.163 (2) Å], and the S—Cu—S' angles are nearly linear [170.86 (6)°]. The S—Cu—N angles in reported complex vary from 73.8 (1) to 99.1 (1)°, which make the octahedral geometry of this compound more disordered than the title compoud.