organic compounds
6-Amino-3,4-dimethyl-4-phenyl-2H,4H-pyrano[2,3-c]pyrazole-5-carbonitrile
aCentre for Bioinformatics, Pondicherry University, Puducherry 605 014, India, and bDepartment of Chemistry, Pondicherry University, Puducherry 605 014, India
*Correspondence e-mail: krishstrucbio@gmail.com
In the title compound, C15H14N4O, the pyrazole ring is aligned at 88.23 (4)° with respect to the aromatic ring and at 3.75 (4)° with respect to the pyran ring. In the crystal, N—H⋯N hydrogen bonds link adjacent molecules into a linear chain motif. C—H⋯N interactions are also observed.
Related literature
For the synthesis, see: Vasuki & Kumaravel (2008). For the use of related compounds in organic synthesis, see: Liang et al. (2009). For related structures, see: Kannan et al. (2010).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811009354/ng5120sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811009354/ng5120Isup2.hkl
The title compound was prepared by the successive addition of acetophenone 2 (0.240 g, 2 mmol), malononitrile (0.132 g, 2 mmol) and piperidine (5 mol%) to a stirred aqueous mixture of hydrazine hydrate 96% 1 (0.107 g, 2 mmol) and ethyl acetoacetate 2 (0.520 g, 2 mmol) at room temperature under an open atmosphere with vigorous stirring for 5–10 min. The precipitated solid was then filtered, followed by washing with water and then with a mixture of ethyl acetate/hexane (20:80). The product obtained was pure by TLC and 1H NMR spectroscopy. Nevertheless, the products were further purified by recrystallization from ethanol. Analysis calculated for 6-amino-3,4-dimethyl-4-phenyl-2H,4H-pyrano[2,3-c]pyrazole-5-carbonitrile showed that it has C15H14N4O.
All hydrogen atoms were placed in calculated positions, with N—H=0.86 and C—H=0.93–0.97 and included in the final cycles of
using a riding model with U(H) = 1.2 Ueq(C).Data collection: APEX2 (Bruker, 2004); cell
APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2009).C15H14N4O | Z = 2 |
Mr = 266.3 | F(000) = 280 |
Triclinic, P1 | Dx = 1.349 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71069 Å |
a = 6.682 (5) Å | Cell parameters from 4350 reflections |
b = 9.347 (5) Å | θ = 1.9–33.3° |
c = 11.078 (5) Å | µ = 0.09 mm−1 |
α = 99.213 (5)° | T = 293 K |
β = 102.740 (5)° | Prism, colourless |
γ = 97.767 (5)° | 0.22 × 0.20 × 0.16 mm |
V = 655.6 (7) Å3 |
Bruker APEXII Kappa CCD-detector diffractometer | 3169 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.036 |
Graphite monochromator | θmax = 33.3°, θmin = 1.9° |
Detector resolution: 0 pixels mm-1 | h = −10→9 |
ω and ϕ scans | k = −14→14 |
18424 measured reflections | l = −17→16 |
4996 independent reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.057 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.173 | H-atom parameters constrained |
S = 0.99 | w = 1/[σ2(Fo2) + (0.0847P)2 + 0.1309P] where P = (Fo2 + 2Fc2)/3 |
4996 reflections | (Δ/σ)max = 0.014 |
183 parameters | Δρmax = 0.30 e Å−3 |
0 restraints | Δρmin = −0.29 e Å−3 |
C15H14N4O | γ = 97.767 (5)° |
Mr = 266.3 | V = 655.6 (7) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.682 (5) Å | Mo Kα radiation |
b = 9.347 (5) Å | µ = 0.09 mm−1 |
c = 11.078 (5) Å | T = 293 K |
α = 99.213 (5)° | 0.22 × 0.20 × 0.16 mm |
β = 102.740 (5)° |
Bruker APEXII Kappa CCD-detector diffractometer | 3169 reflections with I > 2σ(I) |
18424 measured reflections | Rint = 0.036 |
4996 independent reflections |
R[F2 > 2σ(F2)] = 0.057 | 0 restraints |
wR(F2) = 0.173 | H-atom parameters constrained |
S = 0.99 | Δρmax = 0.30 e Å−3 |
4996 reflections | Δρmin = −0.29 e Å−3 |
183 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.22065 (13) | 0.57205 (11) | 0.58851 (9) | 0.0380 (2) | |
C2 | 0.52515 (18) | 0.74174 (14) | 0.57658 (11) | 0.0306 (3) | |
N1 | 0.23543 (18) | 0.67259 (14) | 0.41251 (11) | 0.0406 (3) | |
C6 | 0.64969 (18) | 0.74989 (14) | 0.70869 (12) | 0.0304 (2) | |
C5 | 0.52503 (19) | 0.63581 (14) | 0.76101 (12) | 0.0315 (3) | |
C7 | 0.6205 (2) | 0.60943 (15) | 0.88018 (13) | 0.0377 (3) | |
C4 | 0.32984 (19) | 0.55767 (14) | 0.70373 (12) | 0.0315 (3) | |
C3 | 0.32497 (19) | 0.66098 (15) | 0.52808 (12) | 0.0320 (3) | |
C8 | 0.6664 (2) | 0.90474 (14) | 0.78630 (12) | 0.0332 (3) | |
N3 | 0.21879 (18) | 0.45814 (14) | 0.74817 (12) | 0.0439 (3) | |
H3A | 0.0968 | 0.4142 | 0.7044 | 0.053* | |
H3B | 0.2692 | 0.4379 | 0.8206 | 0.053* | |
N2 | 0.38757 (19) | 0.76374 (15) | 0.38430 (11) | 0.0432 (3) | |
H2 | 0.3736 | 0.7912 | 0.3129 | 0.052* | |
N4 | 0.7004 (2) | 0.59058 (17) | 0.97741 (14) | 0.0571 (4) | |
C1 | 0.5621 (2) | 0.80702 (16) | 0.47848 (13) | 0.0376 (3) | |
C14 | 0.8640 (2) | 0.70915 (18) | 0.70847 (16) | 0.0438 (3) | |
H14A | 0.8467 | 0.6116 | 0.6599 | 0.066* | |
H14B | 0.9397 | 0.7124 | 0.7936 | 0.066* | |
H14C | 0.9401 | 0.7779 | 0.6718 | 0.066* | |
C13 | 0.4882 (2) | 0.95084 (17) | 0.81184 (15) | 0.0442 (3) | |
H13 | 0.3617 | 0.8859 | 0.7841 | 0.053* | |
C9 | 0.8513 (3) | 1.00406 (18) | 0.82993 (17) | 0.0517 (4) | |
H9 | 0.9738 | 0.9768 | 0.8150 | 0.062* | |
C10 | 0.8558 (3) | 1.1452 (2) | 0.89631 (18) | 0.0639 (5) | |
H10 | 0.9817 | 1.2109 | 0.9251 | 0.077* | |
C15 | 0.7477 (3) | 0.9053 (2) | 0.46603 (16) | 0.0536 (4) | |
H15A | 0.8448 | 0.8469 | 0.4411 | 0.080* | |
H15B | 0.8130 | 0.9701 | 0.5456 | 0.080* | |
H15C | 0.7051 | 0.9625 | 0.4033 | 0.080* | |
C12 | 0.4943 (3) | 1.0905 (2) | 0.87732 (17) | 0.0568 (4) | |
H12 | 0.3727 | 1.1186 | 0.8930 | 0.068* | |
C11 | 0.6797 (4) | 1.18818 (19) | 0.91953 (16) | 0.0595 (5) | |
H11 | 0.6843 | 1.2826 | 0.9635 | 0.071* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0256 (4) | 0.0500 (6) | 0.0318 (5) | −0.0082 (4) | −0.0019 (3) | 0.0142 (4) |
C2 | 0.0260 (5) | 0.0314 (6) | 0.0302 (6) | −0.0015 (4) | 0.0032 (4) | 0.0049 (4) |
N1 | 0.0346 (6) | 0.0480 (7) | 0.0319 (6) | −0.0072 (5) | −0.0007 (4) | 0.0116 (5) |
C6 | 0.0233 (5) | 0.0309 (6) | 0.0322 (6) | −0.0011 (4) | 0.0012 (4) | 0.0056 (4) |
C5 | 0.0272 (5) | 0.0296 (6) | 0.0320 (6) | −0.0019 (4) | −0.0014 (4) | 0.0073 (5) |
C7 | 0.0308 (6) | 0.0350 (7) | 0.0397 (7) | −0.0061 (5) | −0.0026 (5) | 0.0109 (5) |
C4 | 0.0266 (5) | 0.0338 (6) | 0.0303 (6) | 0.0004 (4) | 0.0013 (4) | 0.0072 (5) |
C3 | 0.0273 (5) | 0.0362 (6) | 0.0290 (6) | −0.0015 (4) | 0.0029 (4) | 0.0073 (5) |
C8 | 0.0330 (6) | 0.0318 (6) | 0.0286 (6) | −0.0033 (5) | −0.0005 (5) | 0.0066 (5) |
N3 | 0.0331 (6) | 0.0509 (7) | 0.0396 (6) | −0.0111 (5) | −0.0038 (5) | 0.0191 (5) |
N2 | 0.0415 (6) | 0.0517 (7) | 0.0308 (6) | −0.0082 (5) | 0.0030 (5) | 0.0144 (5) |
N4 | 0.0472 (7) | 0.0635 (9) | 0.0477 (8) | −0.0143 (6) | −0.0114 (6) | 0.0260 (7) |
C1 | 0.0327 (6) | 0.0407 (7) | 0.0352 (7) | −0.0031 (5) | 0.0057 (5) | 0.0075 (5) |
C14 | 0.0271 (6) | 0.0477 (8) | 0.0529 (9) | 0.0045 (5) | 0.0052 (6) | 0.0076 (7) |
C13 | 0.0464 (8) | 0.0385 (8) | 0.0450 (8) | 0.0025 (6) | 0.0122 (6) | 0.0034 (6) |
C9 | 0.0384 (7) | 0.0422 (8) | 0.0600 (10) | −0.0085 (6) | −0.0025 (7) | 0.0016 (7) |
C10 | 0.0682 (12) | 0.0430 (9) | 0.0577 (11) | −0.0165 (8) | −0.0087 (9) | −0.0007 (8) |
C15 | 0.0450 (8) | 0.0609 (10) | 0.0498 (9) | −0.0142 (7) | 0.0090 (7) | 0.0193 (8) |
C12 | 0.0746 (12) | 0.0457 (9) | 0.0514 (10) | 0.0136 (8) | 0.0213 (9) | 0.0032 (7) |
C11 | 0.0922 (14) | 0.0371 (8) | 0.0405 (8) | 0.0039 (9) | 0.0083 (9) | −0.0001 (6) |
O1—C4 | 1.3602 (16) | N2—C1 | 1.3465 (19) |
O1—C3 | 1.3611 (16) | N2—H2 | 0.8600 |
C2—C1 | 1.3799 (19) | C1—C15 | 1.486 (2) |
C2—C3 | 1.3885 (18) | C14—H14A | 0.9600 |
C2—C6 | 1.5001 (18) | C14—H14B | 0.9600 |
N1—C3 | 1.3164 (17) | C14—H14C | 0.9600 |
N1—N2 | 1.3595 (17) | C13—C12 | 1.379 (2) |
C6—C5 | 1.5289 (18) | C13—H13 | 0.9300 |
C6—C14 | 1.531 (2) | C9—C10 | 1.397 (3) |
C6—C8 | 1.5369 (19) | C9—H9 | 0.9300 |
C5—C4 | 1.3661 (18) | C10—C11 | 1.357 (3) |
C5—C7 | 1.4091 (19) | C10—H10 | 0.9300 |
C7—N4 | 1.1440 (19) | C15—H15A | 0.9600 |
C4—N3 | 1.3340 (17) | C15—H15B | 0.9600 |
C8—C9 | 1.380 (2) | C15—H15C | 0.9600 |
C8—C13 | 1.390 (2) | C12—C11 | 1.374 (3) |
N3—H3A | 0.8600 | C12—H12 | 0.9300 |
N3—H3B | 0.8600 | C11—H11 | 0.9300 |
C4—O1—C3 | 115.59 (10) | N2—C1—C2 | 106.17 (12) |
C1—C2—C3 | 103.33 (11) | N2—C1—C15 | 122.22 (14) |
C1—C2—C6 | 133.30 (11) | C2—C1—C15 | 131.61 (13) |
C3—C2—C6 | 123.33 (11) | C6—C14—H14A | 109.5 |
C3—N1—N2 | 101.74 (11) | C6—C14—H14B | 109.5 |
C2—C6—C5 | 105.36 (10) | H14A—C14—H14B | 109.5 |
C2—C6—C14 | 110.78 (11) | C6—C14—H14C | 109.5 |
C5—C6—C14 | 109.28 (12) | H14A—C14—H14C | 109.5 |
C2—C6—C8 | 109.09 (10) | H14B—C14—H14C | 109.5 |
C5—C6—C8 | 109.98 (11) | C12—C13—C8 | 121.64 (15) |
C14—C6—C8 | 112.12 (10) | C12—C13—H13 | 119.2 |
C4—C5—C7 | 116.92 (12) | C8—C13—H13 | 119.2 |
C4—C5—C6 | 126.31 (11) | C8—C9—C10 | 120.50 (17) |
C7—C5—C6 | 116.77 (11) | C8—C9—H9 | 119.8 |
N4—C7—C5 | 178.69 (15) | C10—C9—H9 | 119.8 |
N3—C4—O1 | 110.00 (11) | C11—C10—C9 | 121.11 (17) |
N3—C4—C5 | 127.07 (12) | C11—C10—H10 | 119.4 |
O1—C4—C5 | 122.93 (12) | C9—C10—H10 | 119.4 |
N1—C3—O1 | 119.33 (11) | C1—C15—H15A | 109.5 |
N1—C3—C2 | 114.94 (12) | C1—C15—H15B | 109.5 |
O1—C3—C2 | 125.71 (12) | H15A—C15—H15B | 109.5 |
C9—C8—C13 | 117.40 (14) | C1—C15—H15C | 109.5 |
C9—C8—C6 | 123.01 (13) | H15A—C15—H15C | 109.5 |
C13—C8—C6 | 119.57 (11) | H15B—C15—H15C | 109.5 |
C4—N3—H3A | 120.0 | C11—C12—C13 | 120.16 (18) |
C4—N3—H3B | 120.0 | C11—C12—H12 | 119.9 |
H3A—N3—H3B | 120.0 | C13—C12—H12 | 119.9 |
C1—N2—N1 | 113.80 (12) | C10—C11—C12 | 119.19 (17) |
C1—N2—H2 | 123.1 | C10—C11—H11 | 120.4 |
N1—N2—H2 | 123.1 | C12—C11—H11 | 120.4 |
C1—C2—C6—C5 | −173.79 (14) | C6—C2—C3—N1 | 176.69 (12) |
C3—C2—C6—C5 | 8.91 (17) | C1—C2—C3—O1 | 177.46 (13) |
C1—C2—C6—C14 | −55.7 (2) | C6—C2—C3—O1 | −4.6 (2) |
C3—C2—C6—C14 | 126.98 (14) | C2—C6—C8—C9 | −111.80 (15) |
C1—C2—C6—C8 | 68.17 (18) | C5—C6—C8—C9 | 133.10 (14) |
C3—C2—C6—C8 | −109.13 (14) | C14—C6—C8—C9 | 11.29 (19) |
C2—C6—C5—C4 | −7.33 (18) | C2—C6—C8—C13 | 66.30 (15) |
C14—C6—C5—C4 | −126.40 (15) | C5—C6—C8—C13 | −48.80 (16) |
C8—C6—C5—C4 | 110.12 (15) | C14—C6—C8—C13 | −170.61 (13) |
C2—C6—C5—C7 | 173.06 (12) | C3—N1—N2—C1 | −0.42 (17) |
C14—C6—C5—C7 | 53.99 (16) | N1—N2—C1—C2 | −0.34 (18) |
C8—C6—C5—C7 | −69.50 (15) | N1—N2—C1—C15 | 179.23 (15) |
C4—C5—C7—N4 | −158 (8) | C3—C2—C1—N2 | 0.91 (15) |
C6—C5—C7—N4 | 21 (8) | C6—C2—C1—N2 | −176.77 (14) |
C3—O1—C4—N3 | −174.36 (12) | C3—C2—C1—C15 | −178.61 (17) |
C3—O1—C4—C5 | 5.24 (19) | C6—C2—C1—C15 | 3.7 (3) |
C7—C5—C4—N3 | −0.2 (2) | C9—C8—C13—C12 | 0.5 (2) |
C6—C5—C4—N3 | −179.80 (13) | C6—C8—C13—C12 | −177.74 (14) |
C7—C5—C4—O1 | −179.72 (12) | C13—C8—C9—C10 | −0.4 (2) |
C6—C5—C4—O1 | 0.7 (2) | C6—C8—C9—C10 | 177.75 (15) |
N2—N1—C3—O1 | −177.77 (12) | C8—C9—C10—C11 | 0.0 (3) |
N2—N1—C3—C2 | 1.06 (17) | C8—C13—C12—C11 | −0.2 (3) |
C4—O1—C3—N1 | 175.29 (12) | C9—C10—C11—C12 | 0.3 (3) |
C4—O1—C3—C2 | −3.4 (2) | C13—C12—C11—C10 | −0.2 (3) |
C1—C2—C3—N1 | −1.29 (17) |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···N1i | 0.86 | 2.27 | 3.129 (2) | 173 |
N3—H3B···N4ii | 0.86 | 2.26 | 3.087 (2) | 160 |
C10—H10···N4iii | 0.93 | 2.53 | 3.455 (3) | 172 |
C14—H14A···N1iv | 0.96 | 2.59 | 3.522 (3) | 163 |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) −x+1, −y+1, −z+2; (iii) −x+2, −y+2, −z+2; (iv) −x+1, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C15H14N4O |
Mr | 266.3 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 6.682 (5), 9.347 (5), 11.078 (5) |
α, β, γ (°) | 99.213 (5), 102.740 (5), 97.767 (5) |
V (Å3) | 655.6 (7) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.22 × 0.20 × 0.16 |
Data collection | |
Diffractometer | Bruker APEXII Kappa CCD-detector diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 18424, 4996, 3169 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.771 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.057, 0.173, 0.99 |
No. of reflections | 4996 |
No. of parameters | 183 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.30, −0.29 |
Computer programs: APEX2 (Bruker, 2004), APEX2 and SAINT (Bruker, 2004), SAINT and XPREP (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···N1i | 0.86 | 2.27 | 3.129 (2) | 172.6 |
N3—H3B···N4ii | 0.86 | 2.26 | 3.087 (2) | 160.2 |
C10—H10···N4iii | 0.93 | 2.53 | 3.455 (3) | 172.2 |
C14—H14A···N1iv | 0.96 | 2.59 | 3.522 (3) | 162.6 |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) −x+1, −y+1, −z+2; (iii) −x+2, −y+2, −z+2; (iv) −x+1, −y+1, −z+1. |
Acknowledgements
The authors acknowledge the Centre of Excellence in Bioinformatics, Pondicherry University, for providing the facilities for carrying out this work. RK and MK thank the University Grant Commission for providing a Major Research Project and Rajiv Gandhi National Fellowship, respectively. GV thanks the Department of Science and Technology, New Delhi, Government of India (grant No. SR/S5/GC-22/2007) for financial support.
References
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The pyrano pyrazole derivatives are widely used as organic intermediates (Liang et al., 2009) and are well known for their biological contribution as ChK1 inhibitors. In view of the growing importance of the pyrano pyrazole derivatives, we have synthesized the title compound by Rapid four-component reactions in water (Vasuki & Kumaravel, 2008) and the single-crystal structure analysis was undertaken.
In the title compound, the attached benzyl ring makes the dihedral angle of 88.23 (4) ° and orient in (+)-syn-clinal conforamtion with pyrazole ring, whereas the fused pyrazole ring makes 3.75 (4) ° dihedral angle and orient by an (+)-syn-periplanar conformation with respect to the pyran ring (Fig. 1). The methyl group is attached to C6 atom of pyran with an angle of 109.29 (11) °. Two N—H···N and C—H···N intermolecular hydrogen bond interactions (Fig. 2) are observed for maintaining the crystal packing (Fig. 3), in which the N3—H···N4 intermolecular interaction are observed to form R22 (12) ring motifs (Fig. 4). The weak N—H···π intermolecular interaction is also observed for the stabilization of the crystal packing, with a bond distance of 3.382 (3) Å (Fig. 5).