organic compounds
A cocrystal of 3α-hydroxytirucalla-8,24-dien-21-oic acid and 3β-fluorotirucalla-7,24-dien-21-oic acid (0.897:0.103)
aH.E.J Research Institute of Chemistry, International Center for Chemical and Biological Sciences, University of Karachi, Karachi 75270, Pakistan, bDepartment of Chemistry, Higher Teachers Training College, University of Yaounde I, PO Box 48 Yaounde, Cameroon, cDepartment of Organic Chemistry, University of Yaounde I, PO Box 812 Yaounde, Cameroon, and dX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
The title compound, 0.897C30H48O3.0.103C30H47O2F is a of two triterpenes isolated from the resin of Canarium schweinfurthiiand Engl. Both triterpenes consists of four trans-fused rings having chair/half-chair/half-chair and envelope conformations. The molecular conformations are stabilized by intramolecular C—H⋯O hydrogen bonds, forming rings of S(7) graph-set motif. In the crystal, molecules are linked by intermolecular O—H⋯O and C—H⋯O interactions, forming sheets parallel to (001). All atoms. excepting the axially-oriented hydroxyl group in the major component and the equatorially-oriented fluorine atom in the minor component, are overlapping.
Related literature
For the α-hydroxytirucalla-7,24-diene-21-oic acid, see: Mora et al. (2001). For the of 3α-hydroxytirucalla-8,24-diene-21-oic acid, see: Yousuf et al. (2011). For the biological activity of canarium schweinfurthiiand, see: Atawodi (2010); Dongmo et al. (2010). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
of 3Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811011159/rz2572sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811011159/rz2572Isup2.hkl
The resin (100 g) of Canarium schweinfurthii Engl. was collected in Yaounde, Cameroon, in May 2010 and identified by Professor Noumi, a botanist at the Department of Biology, University of Yaounde-1. A voucher specimen (HNC 25918.) was deposited at the National Herbarium of Cameroon in Yaounde. The resin (100 g) of C. schweinfurthii was allowed to dry under shade and extracted with dichloromethane. The extract (70 g) was subjected to
over silica gel (300 g, 60 × 5 cm) eluting with hexane followed by a mixture of n-hexane–EtOAc in order to increase polarity. The fractions eluted were monitored by thin layer and similar fractions were combined to give seven fraction FrA-FrG. Fraction FrA (200 mg), obtained on elution with a mixture of n-hexane-EtOAc (8:2 v/v), was subjected to further over silica gel (70 g, 60 cm3 × 3, hexane-acetone equimolar solution) to yield crystals of the title compound. Recrystallization from n-hexane gave colourless crystals (60 mg).H atoms on the C of methyl, methylene, methine and oxygen were positioned geomatrically with C–H = 0.98–1.00 Å and O–H = 0.86 Å, respectively and constrained to ride on their parent atoms with Uiso(H) = 1.2Ueq(CH2, CH) and 1.5Ueq(CH3, OH). A rotating group model was applied to the methyl groups. The crystal is a twin with
-1 0 0 0 - 1 0 0 0 1 and BASF = 0.1815 (16). Friedel pairs were merged in the last cycles.Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).0.897C30H48O3·0.103C30H47O2F | Dx = 1.130 Mg m−3 |
Mr = 455.88 | Mo Kα radiation, λ = 0.71073 Å |
Trigonal, P3121 | Cell parameters from 10350 reflections |
Hall symbol: p 31 2" | θ = 2.1–30.1° |
a = 11.2868 (9) Å | µ = 0.07 mm−1 |
c = 36.446 (3) Å | T = 100 K |
V = 4020.9 (5) Å3 | Block, colourles |
Z = 6 | 0.29 × 0.24 × 0.13 mm |
F(000) = 1506 |
Bruker SMART APEXII DUO CCD area-detector diffractometer | 4454 independent reflections |
Radiation source: fine-focus sealed tube | 4347 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.105 |
ϕ and ω scans | θmax = 30.1°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −15→15 |
Tmin = 0.980, Tmax = 0.991 | k = −13→15 |
27808 measured reflections | l = −51→38 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.058 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.153 | H-atom parameters constrained |
S = 1.18 | w = 1/[σ2(Fo2) + (0.0644P)2 + 1.6942P] where P = (Fo2 + 2Fc2)/3 |
4454 reflections | (Δ/σ)max < 0.001 |
316 parameters | Δρmax = 0.39 e Å−3 |
0 restraints | Δρmin = −0.33 e Å−3 |
0.897C30H48O3·0.103C30H47O2F | Z = 6 |
Mr = 455.88 | Mo Kα radiation |
Trigonal, P3121 | µ = 0.07 mm−1 |
a = 11.2868 (9) Å | T = 100 K |
c = 36.446 (3) Å | 0.29 × 0.24 × 0.13 mm |
V = 4020.9 (5) Å3 |
Bruker SMART APEXII DUO CCD area-detector diffractometer | 4454 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 4347 reflections with I > 2σ(I) |
Tmin = 0.980, Tmax = 0.991 | Rint = 0.105 |
27808 measured reflections |
R[F2 > 2σ(F2)] = 0.058 | 0 restraints |
wR(F2) = 0.153 | H-atom parameters constrained |
S = 1.18 | Δρmax = 0.39 e Å−3 |
4454 reflections | Δρmin = −0.33 e Å−3 |
316 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
O1 | 0.1191 (2) | 0.0008 (2) | 0.12753 (5) | 0.0221 (4) | |
H1O1 | 0.1119 | −0.0077 | 0.1511 | 0.033* | |
O2 | −0.1057 (2) | −0.0844 (2) | 0.13357 (5) | 0.0230 (4) | |
O3 | 0.6534 (3) | 0.8965 (3) | 0.10496 (7) | 0.0330 (8) | 0.898 (8) |
H3A | 0.7204 | 0.9158 | 0.1187 | 0.049* | 0.898 (8) |
F1 | 0.693 (3) | 1.048 (3) | 0.1287 (7) | 0.042 (7) | 0.102 (8) |
C1 | 0.4098 (3) | 0.7220 (4) | 0.14860 (7) | 0.0268 (7) | |
H1A | 0.3651 | 0.6772 | 0.1720 | 0.032* | |
H1B | 0.4651 | 0.6811 | 0.1403 | 0.032* | |
C2 | 0.5056 (4) | 0.8752 (4) | 0.15562 (8) | 0.0335 (8) | |
H2A | 0.4524 | 0.9153 | 0.1660 | 0.040* | |
H2B | 0.5761 | 0.8875 | 0.1738 | 0.040* | |
C3 | 0.5750 (3) | 0.9496 (4) | 0.12011 (8) | 0.0278 (7) | |
H3B | 0.6369 | 1.0487 | 0.1257 | 0.033* | 0.898 (8) |
H3C | 0.6079 | 0.8925 | 0.1103 | 0.033* | 0.102 (8) |
C4 | 0.4725 (3) | 0.9373 (3) | 0.09109 (9) | 0.0249 (6) | |
C5 | 0.3685 (3) | 0.7821 (3) | 0.08498 (8) | 0.0241 (6) | |
H5A | 0.4249 | 0.7444 | 0.0746 | 0.029* | |
C6 | 0.2630 (5) | 0.7560 (4) | 0.05513 (13) | 0.0500 (13) | |
H6A | 0.2107 | 0.8014 | 0.0622 | 0.060* | |
H6B | 0.3116 | 0.7979 | 0.0319 | 0.060* | |
C7 | 0.1654 (3) | 0.6078 (3) | 0.04875 (8) | 0.0257 (6) | |
H7A | 0.1104 | 0.5813 | 0.0273 | 0.031* | |
C8 | 0.1521 (3) | 0.5079 (3) | 0.07283 (8) | 0.0217 (5) | |
C9 | 0.2374 (4) | 0.5422 (3) | 0.10692 (8) | 0.0299 (7) | |
H9A | 0.3193 | 0.5367 | 0.0989 | 0.036* | |
C10 | 0.2987 (3) | 0.6922 (3) | 0.11976 (8) | 0.0206 (5) | |
C11 | 0.1746 (4) | 0.4342 (3) | 0.13671 (7) | 0.0252 (6) | |
H11A | 0.1766 | 0.4589 | 0.1617 | 0.030* | |
C12 | 0.1076 (4) | 0.2838 (3) | 0.12501 (7) | 0.0277 (7) | |
H12A | 0.0164 | 0.2323 | 0.1367 | 0.033* | |
H12B | 0.1639 | 0.2453 | 0.1342 | 0.033* | |
C13 | 0.0908 (3) | 0.2624 (3) | 0.08335 (7) | 0.0180 (5) | |
C14 | 0.0440 (3) | 0.3596 (3) | 0.06687 (7) | 0.0176 (5) | |
C15 | 0.0125 (4) | 0.3087 (3) | 0.02691 (8) | 0.0273 (6) | |
H15A | 0.0967 | 0.3517 | 0.0119 | 0.033* | |
H15B | −0.0549 | 0.3301 | 0.0159 | 0.033* | |
C16 | −0.0472 (3) | 0.1517 (3) | 0.02956 (7) | 0.0237 (6) | |
H16A | 0.0009 | 0.1221 | 0.0124 | 0.028* | |
H16B | −0.1458 | 0.1027 | 0.0234 | 0.028* | |
C17 | −0.0255 (3) | 0.1210 (3) | 0.06995 (7) | 0.0180 (5) | |
H17A | −0.1100 | 0.1000 | 0.0840 | 0.022* | |
C18 | 0.2267 (3) | 0.2887 (4) | 0.06574 (10) | 0.0294 (7) | |
H18A | 0.2646 | 0.2420 | 0.0801 | 0.044* | |
H18B | 0.2920 | 0.3872 | 0.0654 | 0.044* | |
H18C | 0.2094 | 0.2536 | 0.0406 | 0.044* | |
C19 | 0.1860 (4) | 0.7155 (4) | 0.13545 (15) | 0.0473 (11) | |
H19A | 0.1395 | 0.6511 | 0.1556 | 0.071* | |
H19B | 0.1197 | 0.7011 | 0.1161 | 0.071* | |
H19C | 0.2267 | 0.8094 | 0.1447 | 0.071* | |
C20 | −0.0046 (3) | −0.0042 (3) | 0.07384 (7) | 0.0191 (5) | |
H20A | 0.0854 | 0.0187 | 0.0627 | 0.023* | |
C21 | −0.0021 (3) | −0.0331 (3) | 0.11447 (7) | 0.0184 (5) | |
C22 | −0.1189 (3) | −0.1329 (3) | 0.05494 (7) | 0.0215 (5) | |
H22A | −0.2073 | −0.1581 | 0.0668 | 0.026* | |
H22B | −0.1249 | −0.1112 | 0.0289 | 0.026* | |
C23 | −0.0965 (4) | −0.2561 (4) | 0.05649 (9) | 0.0274 (6) | |
H23A | −0.0041 | −0.2285 | 0.0470 | 0.033* | |
H23B | −0.1006 | −0.2846 | 0.0824 | 0.033* | |
C24 | −0.2013 (4) | −0.3758 (4) | 0.03450 (8) | 0.0269 (6) | |
H24A | −0.1861 | −0.3718 | 0.0088 | 0.032* | |
C25 | −0.3113 (4) | −0.4852 (4) | 0.04663 (8) | 0.0288 (6) | |
C26 | −0.3528 (5) | −0.5105 (6) | 0.08649 (10) | 0.0518 (12) | |
H26A | −0.2775 | −0.4437 | 0.1018 | 0.078* | |
H26B | −0.3741 | −0.6031 | 0.0933 | 0.078* | |
H26C | −0.4337 | −0.5013 | 0.0903 | 0.078* | |
C27 | −0.4081 (5) | −0.5985 (4) | 0.02111 (11) | 0.0418 (9) | |
H27A | −0.3788 | −0.5722 | −0.0043 | 0.063* | |
H27B | −0.5010 | −0.6138 | 0.0242 | 0.063* | |
H27C | −0.4072 | −0.6828 | 0.0269 | 0.063* | |
C28 | 0.5494 (4) | 0.9980 (4) | 0.05503 (9) | 0.0338 (8) | |
H28A | 0.6234 | 1.0919 | 0.0593 | 0.051* | |
H28B | 0.4860 | 0.9982 | 0.0367 | 0.051* | |
H28C | 0.5880 | 0.9425 | 0.0461 | 0.051* | |
C29 | 0.4101 (4) | 1.0252 (4) | 0.10225 (15) | 0.0462 (10) | |
H29A | 0.4819 | 1.1217 | 0.1028 | 0.069* | |
H29B | 0.3689 | 0.9975 | 0.1267 | 0.069* | |
H29C | 0.3397 | 1.0127 | 0.0844 | 0.069* | |
C30 | −0.0905 (3) | 0.3400 (3) | 0.08398 (10) | 0.0267 (6) | |
H30A | −0.1171 | 0.4003 | 0.0716 | 0.040* | |
H30B | −0.0763 | 0.3627 | 0.1102 | 0.040* | |
H30C | −0.1631 | 0.2446 | 0.0810 | 0.040* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0217 (10) | 0.0320 (12) | 0.0167 (7) | 0.0165 (9) | 0.0016 (8) | 0.0012 (8) |
O2 | 0.0198 (10) | 0.0313 (11) | 0.0140 (7) | 0.0099 (9) | 0.0026 (7) | 0.0030 (8) |
O3 | 0.0163 (12) | 0.053 (2) | 0.0305 (13) | 0.0177 (13) | −0.0012 (10) | −0.0023 (13) |
F1 | 0.040 (13) | 0.043 (14) | 0.053 (14) | 0.029 (11) | −0.008 (11) | −0.003 (10) |
C1 | 0.0229 (14) | 0.0342 (17) | 0.0131 (10) | 0.0067 (13) | −0.0047 (10) | −0.0013 (11) |
C2 | 0.0304 (16) | 0.0350 (18) | 0.0138 (11) | 0.0003 (15) | −0.0012 (12) | −0.0055 (12) |
C3 | 0.0149 (12) | 0.0386 (18) | 0.0187 (11) | 0.0049 (13) | −0.0020 (11) | −0.0049 (12) |
C4 | 0.0150 (12) | 0.0214 (14) | 0.0306 (14) | 0.0033 (11) | −0.0048 (11) | −0.0039 (12) |
C5 | 0.0181 (13) | 0.0188 (13) | 0.0281 (13) | 0.0037 (11) | −0.0092 (11) | −0.0005 (11) |
C6 | 0.042 (2) | 0.0203 (16) | 0.064 (3) | −0.0024 (15) | −0.035 (2) | 0.0129 (17) |
C7 | 0.0215 (13) | 0.0218 (14) | 0.0230 (12) | 0.0027 (12) | −0.0109 (11) | 0.0036 (12) |
C8 | 0.0145 (12) | 0.0195 (13) | 0.0246 (12) | 0.0036 (10) | −0.0066 (10) | 0.0032 (11) |
C9 | 0.0392 (18) | 0.0205 (14) | 0.0191 (11) | 0.0068 (14) | −0.0115 (13) | 0.0016 (11) |
C10 | 0.0146 (12) | 0.0222 (13) | 0.0229 (11) | 0.0078 (10) | −0.0029 (10) | −0.0015 (10) |
C11 | 0.0350 (17) | 0.0234 (13) | 0.0114 (10) | 0.0103 (13) | 0.0001 (12) | 0.0007 (10) |
C12 | 0.045 (2) | 0.0203 (13) | 0.0131 (10) | 0.0129 (14) | −0.0069 (13) | 0.0013 (10) |
C13 | 0.0182 (12) | 0.0217 (13) | 0.0133 (9) | 0.0093 (11) | −0.0010 (9) | 0.0026 (9) |
C14 | 0.0158 (12) | 0.0164 (12) | 0.0139 (10) | 0.0031 (10) | −0.0026 (9) | 0.0020 (10) |
C15 | 0.0366 (17) | 0.0253 (14) | 0.0160 (11) | 0.0125 (14) | −0.0072 (12) | 0.0045 (11) |
C16 | 0.0257 (14) | 0.0232 (14) | 0.0157 (10) | 0.0075 (12) | −0.0049 (11) | 0.0005 (11) |
C17 | 0.0177 (12) | 0.0189 (12) | 0.0128 (9) | 0.0056 (10) | 0.0007 (9) | 0.0007 (9) |
C18 | 0.0154 (13) | 0.0244 (16) | 0.0435 (17) | 0.0062 (12) | 0.0006 (13) | 0.0051 (14) |
C19 | 0.0253 (17) | 0.0253 (17) | 0.090 (3) | 0.0118 (15) | 0.022 (2) | 0.010 (2) |
C20 | 0.0190 (12) | 0.0225 (13) | 0.0137 (9) | 0.0088 (11) | 0.0023 (9) | 0.0024 (10) |
C21 | 0.0219 (13) | 0.0179 (12) | 0.0159 (9) | 0.0104 (11) | 0.0010 (10) | −0.0002 (9) |
C22 | 0.0256 (14) | 0.0227 (13) | 0.0142 (9) | 0.0107 (12) | −0.0007 (10) | −0.0005 (10) |
C23 | 0.0264 (15) | 0.0269 (16) | 0.0289 (14) | 0.0134 (13) | 0.0018 (12) | −0.0012 (12) |
C24 | 0.0357 (18) | 0.0276 (15) | 0.0185 (11) | 0.0166 (14) | 0.0020 (12) | −0.0010 (11) |
C25 | 0.0286 (16) | 0.0325 (16) | 0.0245 (13) | 0.0147 (14) | −0.0019 (12) | −0.0009 (12) |
C26 | 0.033 (2) | 0.068 (3) | 0.0296 (16) | 0.007 (2) | 0.0078 (16) | 0.0082 (19) |
C27 | 0.040 (2) | 0.036 (2) | 0.0409 (18) | 0.0125 (18) | −0.0050 (17) | −0.0098 (17) |
C28 | 0.0324 (18) | 0.0280 (16) | 0.0263 (14) | 0.0041 (14) | −0.0089 (13) | 0.0011 (13) |
C29 | 0.0299 (19) | 0.0209 (16) | 0.084 (3) | 0.0097 (15) | 0.005 (2) | 0.0034 (19) |
C30 | 0.0164 (13) | 0.0207 (14) | 0.0383 (16) | 0.0059 (12) | 0.0006 (12) | 0.0005 (13) |
O1—C21 | 1.312 (4) | C14—C30 | 1.552 (4) |
O1—H1O1 | 0.8651 | C15—C16 | 1.552 (5) |
O2—C21 | 1.229 (3) | C15—H15A | 0.9900 |
O3—C3 | 1.406 (5) | C15—H15B | 0.9900 |
O3—H3A | 0.8400 | C16—C17 | 1.559 (4) |
O3—H3C | 0.5288 | C16—H16A | 0.9900 |
F1—C3 | 1.27 (3) | C16—H16B | 0.9900 |
C1—C2 | 1.534 (5) | C17—C20 | 1.551 (4) |
C1—C10 | 1.539 (4) | C17—H17A | 1.0000 |
C1—H1A | 0.9900 | C18—H18A | 0.9800 |
C1—H1B | 0.9900 | C18—H18B | 0.9800 |
C2—C3 | 1.529 (4) | C18—H18C | 0.9800 |
C2—H2A | 0.9900 | C19—H19A | 0.9800 |
C2—H2B | 0.9900 | C19—H19B | 0.9800 |
C3—C4 | 1.521 (4) | C19—H19C | 0.9800 |
C3—H3B | 1.0000 | C20—C21 | 1.519 (3) |
C3—H3C | 0.9601 | C20—C22 | 1.541 (4) |
C4—C29 | 1.532 (5) | C20—H20A | 1.0000 |
C4—C28 | 1.535 (5) | C22—C23 | 1.533 (5) |
C4—C5 | 1.562 (4) | C22—H22A | 0.9900 |
C5—C6 | 1.528 (4) | C22—H22B | 0.9900 |
C5—C10 | 1.568 (4) | C23—C24 | 1.506 (5) |
C5—H5A | 1.0000 | C23—H23A | 0.9900 |
C6—C7 | 1.491 (5) | C23—H23B | 0.9900 |
C6—H6A | 0.9900 | C24—C25 | 1.314 (5) |
C6—H6B | 0.9900 | C24—H24A | 0.9500 |
C7—C8 | 1.376 (4) | C25—C26 | 1.509 (5) |
C7—H7A | 0.9500 | C25—C27 | 1.516 (5) |
C8—C9 | 1.499 (4) | C26—H26A | 0.9800 |
C8—C14 | 1.516 (4) | C26—H26B | 0.9800 |
C9—C11 | 1.517 (4) | C26—H26C | 0.9800 |
C9—C10 | 1.547 (4) | C27—H27A | 0.9800 |
C9—H9A | 1.0000 | C27—H27B | 0.9800 |
C10—C19 | 1.533 (5) | C27—H27C | 0.9800 |
C11—C12 | 1.534 (4) | C28—H28A | 0.9800 |
C11—H11A | 0.9500 | C28—H28B | 0.9800 |
C12—C13 | 1.534 (4) | C28—H28C | 0.9800 |
C12—H12A | 0.9900 | C29—H29A | 0.9800 |
C12—H12B | 0.9900 | C29—H29B | 0.9800 |
C13—C18 | 1.548 (4) | C29—H29C | 0.9800 |
C13—C17 | 1.554 (4) | C30—H30A | 0.9800 |
C13—C14 | 1.556 (4) | C30—H30B | 0.9800 |
C14—C15 | 1.540 (4) | C30—H30C | 0.9800 |
C21—O1—H1O1 | 107.6 | C14—C15—C16 | 104.7 (2) |
C3—O3—H3A | 109.5 | C14—C15—H15A | 110.8 |
C3—O3—H3C | 26.1 | C16—C15—H15A | 110.8 |
H3A—O3—H3C | 121.0 | C14—C15—H15B | 110.8 |
C2—C1—C10 | 113.4 (3) | C16—C15—H15B | 110.8 |
C2—C1—H1A | 108.9 | H15A—C15—H15B | 108.9 |
C10—C1—H1A | 108.9 | C15—C16—C17 | 106.6 (2) |
C2—C1—H1B | 108.9 | C15—C16—H16A | 110.4 |
C10—C1—H1B | 108.9 | C17—C16—H16A | 110.4 |
H1A—C1—H1B | 107.7 | C15—C16—H16B | 110.4 |
C3—C2—C1 | 110.9 (2) | C17—C16—H16B | 110.4 |
C3—C2—H2A | 109.5 | H16A—C16—H16B | 108.6 |
C1—C2—H2A | 109.5 | C20—C17—C13 | 118.1 (2) |
C3—C2—H2B | 109.5 | C20—C17—C16 | 113.6 (2) |
C1—C2—H2B | 109.5 | C13—C17—C16 | 102.4 (2) |
H2A—C2—H2B | 108.0 | C20—C17—H17A | 107.4 |
F1—C3—O3 | 82.0 (11) | C13—C17—H17A | 107.4 |
F1—C3—C4 | 131.7 (11) | C16—C17—H17A | 107.4 |
O3—C3—C4 | 107.4 (2) | C13—C18—H18A | 109.5 |
F1—C3—C2 | 107.2 (11) | C13—C18—H18B | 109.5 |
O3—C3—C2 | 110.9 (3) | H18A—C18—H18B | 109.5 |
C4—C3—C2 | 112.4 (3) | C13—C18—H18C | 109.5 |
F1—C3—H3B | 30.0 | H18A—C18—H18C | 109.5 |
O3—C3—H3B | 108.7 | H18B—C18—H18C | 109.5 |
C4—C3—H3B | 108.7 | C10—C19—H19A | 109.5 |
C2—C3—H3B | 108.7 | C10—C19—H19B | 109.5 |
F1—C3—H3C | 95.1 | H19A—C19—H19B | 109.5 |
O3—C3—H3C | 14.0 | C10—C19—H19C | 109.5 |
C4—C3—H3C | 102.1 | H19A—C19—H19C | 109.5 |
C2—C3—H3C | 102.2 | H19B—C19—H19C | 109.5 |
H3B—C3—H3C | 122.6 | C21—C20—C22 | 109.3 (2) |
C3—C4—C29 | 109.3 (3) | C21—C20—C17 | 108.2 (2) |
C3—C4—C28 | 108.7 (3) | C22—C20—C17 | 112.4 (2) |
C29—C4—C28 | 106.2 (3) | C21—C20—H20A | 109.0 |
C3—C4—C5 | 108.2 (3) | C22—C20—H20A | 109.0 |
C29—C4—C5 | 115.7 (3) | C17—C20—H20A | 109.0 |
C28—C4—C5 | 108.6 (3) | O2—C21—O1 | 122.7 (2) |
C6—C5—C4 | 113.2 (3) | O2—C21—C20 | 122.5 (3) |
C6—C5—C10 | 111.1 (3) | O1—C21—C20 | 114.8 (2) |
C4—C5—C10 | 117.6 (2) | C23—C22—C20 | 113.5 (3) |
C6—C5—H5A | 104.5 | C23—C22—H22A | 108.9 |
C4—C5—H5A | 104.5 | C20—C22—H22A | 108.9 |
C10—C5—H5A | 104.5 | C23—C22—H22B | 108.9 |
C7—C6—C5 | 113.2 (3) | C20—C22—H22B | 108.9 |
C7—C6—H6A | 108.9 | H22A—C22—H22B | 107.7 |
C5—C6—H6A | 108.9 | C24—C23—C22 | 112.5 (3) |
C7—C6—H6B | 108.9 | C24—C23—H23A | 109.1 |
C5—C6—H6B | 108.9 | C22—C23—H23A | 109.1 |
H6A—C6—H6B | 107.7 | C24—C23—H23B | 109.1 |
C8—C7—C6 | 122.4 (3) | C22—C23—H23B | 109.1 |
C8—C7—H7A | 118.8 | H23A—C23—H23B | 107.8 |
C6—C7—H7A | 118.8 | C25—C24—C23 | 127.8 (3) |
C7—C8—C9 | 121.6 (3) | C25—C24—H24A | 116.1 |
C7—C8—C14 | 120.8 (2) | C23—C24—H24A | 116.1 |
C9—C8—C14 | 117.5 (2) | C24—C25—C26 | 124.0 (3) |
C8—C9—C11 | 113.8 (3) | C24—C25—C27 | 122.0 (3) |
C8—C9—C10 | 114.3 (3) | C26—C25—C27 | 114.0 (3) |
C11—C9—C10 | 115.9 (2) | C25—C26—H26A | 109.5 |
C8—C9—H9A | 103.6 | C25—C26—H26B | 109.5 |
C11—C9—H9A | 103.6 | H26A—C26—H26B | 109.5 |
C10—C9—H9A | 103.6 | C25—C26—H26C | 109.5 |
C19—C10—C1 | 111.3 (3) | H26A—C26—H26C | 109.5 |
C19—C10—C9 | 110.2 (3) | H26B—C26—H26C | 109.5 |
C1—C10—C9 | 108.4 (3) | C25—C27—H27A | 109.5 |
C19—C10—C5 | 112.4 (3) | C25—C27—H27B | 109.5 |
C1—C10—C5 | 108.7 (2) | H27A—C27—H27B | 109.5 |
C9—C10—C5 | 105.6 (2) | C25—C27—H27C | 109.5 |
C9—C11—C12 | 117.6 (2) | H27A—C27—H27C | 109.5 |
C9—C11—H11A | 121.2 | H27B—C27—H27C | 109.5 |
C12—C11—H11A | 121.2 | C4—C28—H28A | 109.5 |
C11—C12—C13 | 113.8 (2) | C4—C28—H28B | 109.5 |
C11—C12—H12A | 108.8 | H28A—C28—H28B | 109.5 |
C13—C12—H12A | 108.8 | C4—C28—H28C | 109.5 |
C11—C12—H12B | 108.8 | H28A—C28—H28C | 109.5 |
C13—C12—H12B | 108.8 | H28B—C28—H28C | 109.5 |
H12A—C12—H12B | 107.7 | C4—C29—H29A | 109.5 |
C12—C13—C18 | 110.3 (3) | C4—C29—H29B | 109.5 |
C12—C13—C17 | 116.6 (2) | H29A—C29—H29B | 109.5 |
C18—C13—C17 | 108.3 (2) | C4—C29—H29C | 109.5 |
C12—C13—C14 | 109.3 (2) | H29A—C29—H29C | 109.5 |
C18—C13—C14 | 111.0 (2) | H29B—C29—H29C | 109.5 |
C17—C13—C14 | 101.1 (2) | C14—C30—H30A | 109.5 |
C8—C14—C15 | 117.1 (2) | C14—C30—H30B | 109.5 |
C8—C14—C30 | 106.8 (3) | H30A—C30—H30B | 109.5 |
C15—C14—C30 | 107.4 (3) | C14—C30—H30C | 109.5 |
C8—C14—C13 | 110.7 (2) | H30A—C30—H30C | 109.5 |
C15—C14—C13 | 101.5 (2) | H30B—C30—H30C | 109.5 |
C30—C14—C13 | 113.4 (2) | ||
C10—C1—C2—C3 | −57.4 (4) | C9—C11—C12—C13 | −10.5 (5) |
C1—C2—C3—F1 | −148.0 (12) | C11—C12—C13—C18 | 81.3 (4) |
C1—C2—C3—O3 | −60.1 (4) | C11—C12—C13—C17 | −154.6 (3) |
C1—C2—C3—C4 | 60.2 (4) | C11—C12—C13—C14 | −40.9 (4) |
F1—C3—C4—C29 | −70.9 (16) | C7—C8—C14—C15 | 35.8 (4) |
O3—C3—C4—C29 | −165.7 (3) | C9—C8—C14—C15 | −147.8 (3) |
C2—C3—C4—C29 | 72.0 (4) | C7—C8—C14—C30 | −84.6 (4) |
F1—C3—C4—C28 | 44.6 (16) | C9—C8—C14—C30 | 91.8 (3) |
O3—C3—C4—C28 | −50.3 (4) | C7—C8—C14—C13 | 151.4 (3) |
C2—C3—C4—C28 | −172.6 (3) | C9—C8—C14—C13 | −32.2 (4) |
F1—C3—C4—C5 | 162.4 (15) | C12—C13—C14—C8 | 63.1 (3) |
O3—C3—C4—C5 | 67.5 (3) | C18—C13—C14—C8 | −58.8 (3) |
C2—C3—C4—C5 | −54.8 (4) | C17—C13—C14—C8 | −173.5 (2) |
C3—C4—C5—C6 | −177.7 (3) | C12—C13—C14—C15 | −171.9 (3) |
C29—C4—C5—C6 | 59.3 (5) | C18—C13—C14—C15 | 66.2 (3) |
C28—C4—C5—C6 | −59.9 (4) | C17—C13—C14—C15 | −48.5 (3) |
C3—C4—C5—C10 | 50.5 (4) | C12—C13—C14—C30 | −57.0 (3) |
C29—C4—C5—C10 | −72.5 (4) | C18—C13—C14—C30 | −178.9 (3) |
C28—C4—C5—C10 | 168.3 (3) | C17—C13—C14—C30 | 66.4 (3) |
C4—C5—C6—C7 | 178.8 (4) | C8—C14—C15—C16 | 156.0 (3) |
C10—C5—C6—C7 | −46.3 (5) | C30—C14—C15—C16 | −83.9 (3) |
C5—C6—C7—C8 | 14.2 (6) | C13—C14—C15—C16 | 35.4 (3) |
C6—C7—C8—C9 | −1.1 (6) | C14—C15—C16—C17 | −9.2 (3) |
C6—C7—C8—C14 | 175.2 (4) | C12—C13—C17—C20 | −73.7 (3) |
C7—C8—C9—C11 | 157.2 (3) | C18—C13—C17—C20 | 51.4 (3) |
C14—C8—C9—C11 | −19.2 (4) | C14—C13—C17—C20 | 168.0 (2) |
C7—C8—C9—C10 | 21.0 (5) | C12—C13—C17—C16 | 160.6 (3) |
C14—C8—C9—C10 | −155.4 (3) | C18—C13—C17—C16 | −74.3 (3) |
C2—C1—C10—C19 | −74.9 (3) | C14—C13—C17—C16 | 42.4 (3) |
C2—C1—C10—C9 | 163.8 (3) | C15—C16—C17—C20 | −149.2 (3) |
C2—C1—C10—C5 | 49.5 (3) | C15—C16—C17—C13 | −20.7 (3) |
C8—C9—C10—C19 | 71.6 (4) | C13—C17—C20—C21 | 66.8 (3) |
C11—C9—C10—C19 | −63.7 (4) | C16—C17—C20—C21 | −173.3 (2) |
C8—C9—C10—C1 | −166.4 (3) | C13—C17—C20—C22 | −172.4 (2) |
C11—C9—C10—C1 | 58.4 (4) | C16—C17—C20—C22 | −52.5 (3) |
C8—C9—C10—C5 | −50.0 (4) | C22—C20—C21—O2 | −49.3 (4) |
C11—C9—C10—C5 | 174.7 (3) | C17—C20—C21—O2 | 73.4 (4) |
C6—C5—C10—C19 | −56.8 (4) | C22—C20—C21—O1 | 130.6 (3) |
C4—C5—C10—C19 | 75.9 (4) | C17—C20—C21—O1 | −106.7 (3) |
C6—C5—C10—C1 | 179.5 (3) | C21—C20—C22—C23 | −63.1 (3) |
C4—C5—C10—C1 | −47.7 (4) | C17—C20—C22—C23 | 176.8 (2) |
C6—C5—C10—C9 | 63.4 (4) | C20—C22—C23—C24 | −174.0 (2) |
C4—C5—C10—C9 | −163.9 (3) | C22—C23—C24—C25 | −99.7 (4) |
C8—C9—C11—C12 | 42.2 (5) | C23—C24—C25—C26 | −0.2 (7) |
C10—C9—C11—C12 | 177.7 (3) | C23—C24—C25—C27 | −179.9 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O1···O2i | 0.87 | 1.81 | 2.654 (3) | 165 |
O3—H3A···O2ii | 0.84 | 2.04 | 2.818 (4) | 154 |
C12—H12B···O1 | 0.99 | 2.56 | 3.262 (4) | 128 |
C22—H22A···O3iii | 0.99 | 2.40 | 3.300 (5) | 151 |
Symmetry codes: (i) −x, −x+y, −z+1/3; (ii) x+1, y+1, z; (iii) x−1, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | 0.897C30H48O3·0.103C30H47O2F |
Mr | 455.88 |
Crystal system, space group | Trigonal, P3121 |
Temperature (K) | 100 |
a, c (Å) | 11.2868 (9), 36.446 (3) |
V (Å3) | 4020.9 (5) |
Z | 6 |
Radiation type | Mo Kα |
µ (mm−1) | 0.07 |
Crystal size (mm) | 0.29 × 0.24 × 0.13 |
Data collection | |
Diffractometer | Bruker SMART APEXII DUO CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.980, 0.991 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 27808, 4454, 4347 |
Rint | 0.105 |
(sin θ/λ)max (Å−1) | 0.705 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.058, 0.153, 1.18 |
No. of reflections | 4454 |
No. of parameters | 316 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.39, −0.33 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O1···O2i | 0.87 | 1.81 | 2.654 (3) | 165 |
O3—H3A···O2ii | 0.84 | 2.04 | 2.818 (4) | 154 |
C12—H12B···O1 | 0.99 | 2.56 | 3.262 (4) | 128 |
C22—H22A···O3iii | 0.99 | 2.40 | 3.300 (5) | 151 |
Symmetry codes: (i) −x, −x+y, −z+1/3; (ii) x+1, y+1, z; (iii) x−1, y−1, z. |
Footnotes
‡Thomson Reuters ResearcherID: A-3561-2009.
Acknowledgements
RSTK thanks the H.E.J. Research Institute of Chemistry, International Center for Chemical and Biological Sciences, University of Karachi, for providing research facilities. SY thanks the School of Physics, Universiti Sains Malaysia, for providing X-ray diffraction research facilities. HKF thanks the Malaysian Government and Universiti Sains Malaysia for the Research University Grant No. 1001/PFIZIK/811160.
References
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The title compound is a co-crystal of two triterpenes namely 3α-hydroxytirucalla-7,24-dien-21-oic acid (or epielemadienolic acid, I) as a major component (89.7%) and 3β-fluorotirucalla- 7,24-dien-21-oic acid (II) as minor component (10.3%). The co-crystal was isolated during the phytochemical investigation of the dichloromethane soluble part of the resins of the medicinally important plant Canarium schweinfurthii of Cameroon. The plant has been used for the treatment of a wide range of ailments including malaria, fever and diarrhea (Atawodi, 2010; Dongmo et al., 2010). The refinement of the crystal structure revealed I and II as major (89.7%) and minor (10.3%) component, respectively with the difference that in II the axially oriented hydroxyl group attached to C3 has been replaced by the equatorially oriented fluorine atom. The asymmetric unit of the co-crystal (Fig. 1) consists of the mixture of I (Fig. 2) and II (Fig. 3). The crystal structure of the major component I has already been reported and the space group (P3121) and cell parameters were found to be similar to those previously reported (Mora et al.. 2001, Yousuf et al., 2011). However the minor component II was found to be a new triterpene. In both components the molecular structure showed that the trans fused rings A/B/C and D adopt chair [Q= 0.550 (4) Å, θ = 7.1 (4)° and ϕ = 88 (3)°] / half-chair [Q= 0.530 (4) Å, θ = 49.5 (4)° and ϕ = 323.5 (6)°] / half-chair [Q= 0.652 (4) Å, θ = 100.4 (4)° and ϕ = 83.8 (3)°] and envelope [Q= 0.483 (2)Å and ϕ = 10.7 (4)°] conformations respectively. The chair and envelop conformations of rings C and D are stabilized by C12—H12B···O1 intramolecular hydrogen bond. In the crystal structure, the molecules are linked to form two-dimensional molecular sheets via O3—H3A···O2, O1—H1O1···O2 and C22—H22A···O3 intermolecular hydrogen bonds (symmetry codes as in Table 1) and arranged parallel to the (001) plane (Fig.2).The absolute configuration was assigned on the basis of our recently published triterpene crystal data (Yousuf et al., 2011).